@mmnto/totem 1.3.15 → 1.3.17

package/dist/index.d.ts

@@ -39,6 +39,9 @@ export { extractField, extractManualPattern } from './lesson-pattern.js';
 export type { IngestionSanitizeOptions } from './sanitize.js';
 export { BASE64_BLOB_RE, INSTRUCTIONAL_LEAKAGE_RE, maskSecrets, sanitize, sanitizeForIngestion, UNICODE_ESCAPE_RE, XML_TAG_LEAKAGE_RE, } from './sanitize.js';
 export { wrapXml } from './xml-format.js';
+export type { ExtractedLesson } from './suspicious-lesson.js';
+export { collectCodeRanges, DEFENSIVE_KEYWORD_RE, DEFENSIVE_PROXIMITY_WINDOW, flagSuspiciousLessons, isInstructionalContext, MAX_SUSPICIOUS_HEADING_LENGTH, } from './suspicious-lesson.js';
+export { cosineSimilarity, deduplicateLessons } from './semantic-dedup.js';
 export type { CursorInstruction } from './cursor-adapter.js';
 export { scanCursorInstructions } from './cursor-adapter.js';
 export type { RuleMetric, RuleMetricsFile } from './rule-metrics.js';

package/dist/index.d.ts.map

@@ -1 +1 @@
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package/dist/index.js

@@ -28,6 +28,9 @@ export { validateLessons } from './lesson-linter.js';
 export { extractField, extractManualPattern } from './lesson-pattern.js';
 export { BASE64_BLOB_RE, INSTRUCTIONAL_LEAKAGE_RE, maskSecrets, sanitize, sanitizeForIngestion, UNICODE_ESCAPE_RE, XML_TAG_LEAKAGE_RE, } from './sanitize.js';
 export { wrapXml } from './xml-format.js';
+export { collectCodeRanges, DEFENSIVE_KEYWORD_RE, DEFENSIVE_PROXIMITY_WINDOW, flagSuspiciousLessons, isInstructionalContext, MAX_SUSPICIOUS_HEADING_LENGTH, } from './suspicious-lesson.js';
+// Semantic deduplication
+export { cosineSimilarity, deduplicateLessons } from './semantic-dedup.js';
 export { scanCursorInstructions } from './cursor-adapter.js';
 export { loadRuleMetrics, recordSuppression, recordTrigger, saveRuleMetrics, } from './rule-metrics.js';
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -1 +1 @@
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package/dist/rule-tester.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"rule-tester.d.ts","sourceRoot":"","sources":["../src/rule-tester.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EAAE,YAAY,EAAgB,MAAM,eAAe,CAAC;AAKhE,MAAM,WAAW,eAAe;IAC9B,qCAAqC;IACrC,QAAQ,EAAE,MAAM,CAAC;IACjB,mEAAmE;IACnE,QAAQ,EAAE,MAAM,CAAC;IACjB,yCAAyC;IACzC,SAAS,EAAE,MAAM,EAAE,CAAC;IACpB,6CAA6C;IAC7C,SAAS,EAAE,MAAM,EAAE,CAAC;IACpB,sCAAsC;IACtC,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,cAAc;IAC7B,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,MAAM,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,qEAAqE;IACrE,WAAW,EAAE,MAAM,EAAE,CAAC;IACtB,iEAAiE;IACjE,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,uEAAuE;IACvE,MAAM,EAAE,OAAO,CAAC;CACjB;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;IACf,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,cAAc,EAAE,CAAC;CAC3B;AASD,wBAAgB,YAAY,CAAC,OAAO,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,eAAe,GAAG,IAAI,CAoBzF;AAaD,wBAAgB,QAAQ,CAAC,IAAI,EAAE,YAAY,EAAE,OAAO,EAAE,eAAe,GAAG,cAAc,CA0DrF;AAID,wBAAgB,YAAY,CAAC,QAAQ,EAAE,MAAM,GAAG,eAAe,EAAE,CAchE;AAED,wBAAgB,YAAY,CAAC,SAAS,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,eAAe,CAmCjF"}

package/dist/rule-tester.js

@@ -1,5 +1,6 @@
 import * as fs from 'node:fs';
 import * as path from 'node:path';
+import { matchAstGrepPattern } from './ast-grep-query.js';
 import { applyRulesToAdditions, loadCompiledRules } from './compiler.js';
 // ─── Fixture parsing ─────────────────────────────────
 const FRONTMATTER_RE = /^---\s*\n([\s\S]*?)\n---/;
@@ -41,20 +42,46 @@ export function testRule(rule, fixture) {
         falsePositives: [],
         passed: true,
     };
-    // Test fail lines — each should produce at least one violation
-    for (const line of fixture.failLines) {
-        const additions = linesToAdditions([line], fixture.filePath);
-        const violations = applyRulesToAdditions([rule], additions);
-        if (violations.length === 0) {
-            result.missedFails.push(line);
+    const isAstGrep = rule.engine === 'ast-grep' && rule.astGrepPattern;
+    if (isAstGrep) {
+        const ext = path.extname(fixture.filePath) || '.ts';
+        const pattern = rule.astGrepPattern;
+        // Test fail block — parse all fail lines as one snippet; expect at least one match
+        if (fixture.failLines.length > 0) {
+            const content = fixture.failLines.join('\n');
+            const allLineNums = fixture.failLines.map((_, i) => i + 1);
+            const onWarn = (msg) => result.missedFails.push(`[ast-grep warning] ${msg}`);
+            const matches = matchAstGrepPattern(content, ext, pattern, allLineNums, onWarn);
+            if (matches.length === 0) {
+                result.missedFails.push(fixture.failLines.join('\n'));
+            }
+        }
+        // Test pass block — parse all pass lines as one snippet; expect zero matches
+        if (fixture.passLines.length > 0) {
+            const content = fixture.passLines.join('\n');
+            const allLineNums = fixture.passLines.map((_, i) => i + 1);
+            const onWarn = (msg) => result.falsePositives.push(`[ast-grep warning] ${msg}`);
+            const matches = matchAstGrepPattern(content, ext, pattern, allLineNums, onWarn);
+            if (matches.length > 0) {
+                result.falsePositives.push(fixture.passLines.join('\n'));
+            }
         }
     }
-    // Test pass lines — none should produce violations
-    for (const line of fixture.passLines) {
-        const additions = linesToAdditions([line], fixture.filePath);
-        const violations = applyRulesToAdditions([rule], additions);
-        if (violations.length > 0) {
-            result.falsePositives.push(line);
+    else {
+        // Regex-engine rules — test line by line
+        for (const line of fixture.failLines) {
+            const additions = linesToAdditions([line], fixture.filePath);
+            const violations = applyRulesToAdditions([rule], additions);
+            if (violations.length === 0) {
+                result.missedFails.push(line);
+            }
+        }
+        for (const line of fixture.passLines) {
+            const additions = linesToAdditions([line], fixture.filePath);
+            const violations = applyRulesToAdditions([rule], additions);
+            if (violations.length > 0) {
+                result.falsePositives.push(line);
+            }
         }
     }
     result.passed = result.missedFails.length === 0 && result.falsePositives.length === 0;

package/dist/rule-tester.js.map

@@ -1 +1 @@
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package/dist/semantic-dedup.d.ts

@@ -0,0 +1,17 @@
+import type { Embedder } from './embedders/embedder.js';
+import type { LanceStore } from './store/lance-store.js';
+import type { ExtractedLesson } from './suspicious-lesson.js';
+/** Cosine similarity between two vectors of equal length. */
+export declare function cosineSimilarity(a: number[], b: number[]): number;
+/**
+ * Remove semantically duplicate lessons by checking against both the LanceDB
+ * index and already-accepted candidates in the current batch.
+ *
+ * Uses embedding cosine similarity with a configurable threshold (default 0.92).
+ * Returns only the lessons that are sufficiently novel.
+ */
+export declare function deduplicateLessons(candidates: ExtractedLesson[], store: LanceStore, embedder: Embedder, threshold?: number): Promise<{
+    kept: ExtractedLesson[];
+    dropped: ExtractedLesson[];
+}>;
+//# sourceMappingURL=semantic-dedup.d.ts.map

package/dist/semantic-dedup.d.ts.map

@@ -0,0 +1 @@
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package/dist/semantic-dedup.js

@@ -0,0 +1,72 @@
+import { TotemError } from './errors.js';
+// ─── Cosine similarity ─────────────────────────────────
+/** Cosine similarity between two vectors of equal length. */
+export function cosineSimilarity(a, b) {
+    if (a.length !== b.length) {
+        throw new TotemError('PARSE_FAILED', 'Cannot compute cosine similarity for vectors of different lengths.', 'This is an internal error. The embedding dimensions may have changed between runs.');
+    }
+    let dot = 0;
+    let magA = 0;
+    let magB = 0;
+    for (let i = 0; i < a.length; i++) {
+        dot += a[i] * b[i];
+        magA += a[i] * a[i];
+        magB += b[i] * b[i];
+    }
+    const denom = Math.sqrt(magA) * Math.sqrt(magB);
+    return denom === 0 ? 0 : dot / denom;
+}
+// ─── Semantic deduplication ─────────────────────────────
+/**
+ * Remove semantically duplicate lessons by checking against both the LanceDB
+ * index and already-accepted candidates in the current batch.
+ *
+ * Uses embedding cosine similarity with a configurable threshold (default 0.92).
+ * Returns only the lessons that are sufficiently novel.
+ */
+export async function deduplicateLessons(candidates, store, embedder, threshold = 0.92) {
+    if (candidates.length === 0)
+        return { kept: [], dropped: [] };
+    const kept = [];
+    const dropped = [];
+    const batchVectors = [];
+    for (const candidate of candidates) {
+        // Check against existing LanceDB lessons
+        let isDbDuplicate = false;
+        try {
+            const results = await store.search({
+                query: candidate.text,
+                typeFilter: 'spec',
+                maxResults: 1,
+            });
+            if (results.length > 0 && results[0].score >= threshold) {
+                isDbDuplicate = true;
+            }
+        }
+        catch {
+            // Empty DB or no table — no existing lessons to dedup against
+        }
+        if (isDbDuplicate) {
+            dropped.push(candidate);
+            continue;
+        }
+        // Check against already-accepted candidates in this batch
+        const [candidateVector] = await embedder.embed([candidate.text]);
+        let isIntraBatchDuplicate = false;
+        for (const batchVec of batchVectors) {
+            if (cosineSimilarity(candidateVector, batchVec) >= threshold) {
+                isIntraBatchDuplicate = true;
+                break;
+            }
+        }
+        if (isIntraBatchDuplicate) {
+            dropped.push(candidate);
+        }
+        else {
+            kept.push(candidate);
+            batchVectors.push(candidateVector);
+        }
+    }
+    return { kept, dropped };
+}
+//# sourceMappingURL=semantic-dedup.js.map

package/dist/semantic-dedup.js.map

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package/dist/store/lance-health.d.ts

@@ -0,0 +1,14 @@
+import type * as lancedb from '@lancedb/lancedb';
+import type { Embedder } from '../embedders/embedder.js';
+import type { HealthCheckResult, SearchOptions, SearchResult } from '../types.js';
+/**
+ * Run a health check against the index, verifying dimensions, search, and FTS.
+ *
+ * @param table - The LanceDB table (may be null if not yet created)
+ * @param embedder - The active embedder (used for dimension comparison)
+ * @param searchFn - A function that performs a search (used for the canary probe)
+ * @param detectFtsIndexFn - A function that detects FTS index availability
+ * @param getFtsStatus - A function that returns the current FTS availability flag
+ */
+export declare function runHealthCheck(table: lancedb.Table | null, embedder: Embedder, searchFn: (options: SearchOptions) => Promise<SearchResult[]>, detectFtsIndexFn: () => Promise<void>, getFtsStatus: () => boolean): Promise<HealthCheckResult>;
+//# sourceMappingURL=lance-health.d.ts.map

package/dist/store/lance-health.d.ts.map

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package/dist/store/lance-health.js

@@ -0,0 +1,100 @@
+/**
+ * Run a health check against the index, verifying dimensions, search, and FTS.
+ *
+ * @param table - The LanceDB table (may be null if not yet created)
+ * @param embedder - The active embedder (used for dimension comparison)
+ * @param searchFn - A function that performs a search (used for the canary probe)
+ * @param detectFtsIndexFn - A function that detects FTS index availability
+ * @param getFtsStatus - A function that returns the current FTS availability flag
+ */
+export async function runHealthCheck(table, embedder, searchFn, detectFtsIndexFn, getFtsStatus) {
+    const start = Date.now();
+    const issues = [];
+    let totalChunks = 0;
+    let storedDimensions = null;
+    let dimensionMatch = false;
+    let canarySearchOk = false;
+    let ftsAvailable = false;
+    const expectedDimensions = embedder.dimensions;
+    // 1. Count rows and check dimensions
+    try {
+        if (table) {
+            totalChunks = await table.countRows();
+            if (totalChunks > 0) {
+                // Read one row to get stored vector dimensions
+                const rows = await table.query().select(['vector']).limit(1).toArray();
+                if (rows.length > 0) {
+                    const raw = rows[0]['vector'];
+                    // LanceDB may return Arrow FixedSizeList — coerce to plain array
+                    const vec = Array.isArray(raw)
+                        ? raw
+                        : raw && typeof raw.toArray === 'function'
+                            ? raw.toArray()
+                            : raw && typeof raw.length === 'number'
+                                ? Array.from(raw)
+                                : null;
+                    if (vec) {
+                        storedDimensions = vec.length;
+                        dimensionMatch = storedDimensions === expectedDimensions;
+                        if (!dimensionMatch) {
+                            issues.push(`Dimension mismatch: embedder expects ${expectedDimensions} but stored vectors have ${storedDimensions}`);
+                        }
+                    }
+                    else {
+                        issues.push('Could not read vector column from stored row');
+                    }
+                }
+            }
+            else {
+                // Empty table — dimensions can't be verified but that's OK
+                dimensionMatch = true;
+            }
+        }
+        else {
+            // No table — treat as empty, still healthy
+            dimensionMatch = true;
+        }
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        issues.push(`Dimension check failed: ${msg}`);
+    }
+    // 2. Canary search — embed a probe string and run a search
+    try {
+        if (table && totalChunks > 0) {
+            await searchFn({ query: 'totem health check canary', maxResults: 1, hybrid: false });
+            canarySearchOk = true;
+        }
+        else {
+            // No data to search — canary is trivially OK
+            canarySearchOk = true;
+        }
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        issues.push(`Canary search failed: ${msg}`);
+    }
+    // 3. FTS availability
+    try {
+        await detectFtsIndexFn();
+        ftsAvailable = getFtsStatus();
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        issues.push(`FTS detection failed: ${msg}`);
+    }
+    const durationMs = Date.now() - start;
+    const healthy = issues.length === 0;
+    return {
+        healthy,
+        durationMs,
+        totalChunks,
+        expectedDimensions,
+        storedDimensions,
+        dimensionMatch,
+        canarySearchOk,
+        ftsAvailable,
+        issues,
+    };
+}
+//# sourceMappingURL=lance-health.js.map

package/dist/store/lance-health.js.map

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package/dist/store/lance-search.d.ts

@@ -0,0 +1,13 @@
+import type * as lancedb from '@lancedb/lancedb';
+import type { ContentType } from '../config-schema.js';
+import type { Embedder } from '../embedders/embedder.js';
+import type { SearchResult } from '../types.js';
+/** Pure vector search (original behavior). */
+export declare function runVectorSearch(table: lancedb.Table, embedder: Embedder, query: string, typeFilter: ContentType | undefined, maxResults: number, boundary?: string | string[]): Promise<SearchResult[]>;
+/**
+ * Hybrid search: runs vector + FTS in parallel, merges with RRF.
+ * Each leg fetches `maxResults * HYBRID_OVERFETCH_FACTOR` candidates
+ * to give RRF enough diversity to produce `maxResults` fused results.
+ */
+export declare function runHybridSearch(table: lancedb.Table, embedder: Embedder, onWarn: (msg: string) => void, query: string, typeFilter: ContentType | undefined, maxResults: number, boundary?: string | string[]): Promise<SearchResult[]>;
+//# sourceMappingURL=lance-search.d.ts.map

package/dist/store/lance-search.d.ts.map

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package/dist/store/lance-search.js

@@ -0,0 +1,128 @@
+/** RRF constant — standard value from the original RRF paper. */
+const RRF_K = 60;
+/**
+ * Number of extra candidates to fetch per search leg during hybrid search.
+ * We fetch more than `maxResults` per leg so that after RRF fusion we
+ * still have enough results even when the two legs return different sets.
+ */
+const HYBRID_OVERFETCH_FACTOR = 3;
+/** Pure vector search (original behavior). */
+export async function runVectorSearch(table, embedder, query, typeFilter, maxResults, boundary) {
+    const [queryVector] = await embedder.embed([query]);
+    let q = table.vectorSearch(queryVector).limit(maxResults);
+    const whereClause = buildWhereClause(typeFilter, boundary);
+    if (whereClause)
+        q = q.where(whereClause);
+    const results = await q.toArray();
+    return results.map(rowToSearchResult);
+}
+/**
+ * Hybrid search: runs vector + FTS in parallel, merges with RRF.
+ * Each leg fetches `maxResults * HYBRID_OVERFETCH_FACTOR` candidates
+ * to give RRF enough diversity to produce `maxResults` fused results.
+ */
+export async function runHybridSearch(table, embedder, onWarn, query, typeFilter, maxResults, boundary) {
+    const fetchCount = maxResults * HYBRID_OVERFETCH_FACTOR;
+    const whereClause = buildWhereClause(typeFilter, boundary);
+    const [queryVector] = await embedder.embed([query]);
+    // Run both legs in parallel
+    const [vectorResults, ftsResults] = await Promise.all([
+        runVectorLeg(table, queryVector, whereClause, fetchCount),
+        runFtsLeg(table, onWarn, query, whereClause, fetchCount),
+    ]);
+    // Merge with RRF
+    return rrfMerge(vectorResults, ftsResults, maxResults);
+}
+async function runVectorLeg(table, queryVector, whereClause, limit) {
+    let q = table.vectorSearch(queryVector).limit(limit).withRowId();
+    if (whereClause)
+        q = q.where(whereClause);
+    const rows = await q.toArray();
+    return rows.map((row, rank) => ({
+        row,
+        rank: rank + 1,
+        id: String(row['_rowid'] ?? row['id']),
+    }));
+}
+async function runFtsLeg(table, onWarn, query, whereClause, limit) {
+    try {
+        let q = table.search(query, 'fts', 'content').withRowId();
+        if (whereClause)
+            q = q.where(whereClause);
+        q = q.limit(limit);
+        const rows = await q.toArray();
+        return rows.map((row, rank) => ({
+            row,
+            rank: rank + 1,
+            id: String(row['_rowid'] ?? row['id']),
+        }));
+    }
+    catch (err) {
+        // FTS leg failed — degrade gracefully
+        const msg = err instanceof Error ? err.message : String(err);
+        onWarn(`FTS search failed, falling back to vector-only: ${msg}`);
+        return [];
+    }
+}
+// ─── Internal helpers ──────────────────────────────────
+/** Escape a single boundary prefix for use in a SQL LIKE clause. */
+function escapeBoundaryPrefix(raw) {
+    // Normalize Windows backslashes to forward slashes
+    const normalized = raw.replace(/\\/g, '/');
+    // Escape SQL LIKE wildcards (%, _), backticks, and single quotes
+    return normalized
+        .replace(/`/g, '\\`')
+        .replace(/%/g, '\\%')
+        .replace(/_/g, '\\_')
+        .replace(/'/g, "''");
+}
+/** Build a SQL WHERE clause from optional type and boundary filters. */
+function buildWhereClause(typeFilter, boundary) {
+    const conditions = [];
+    if (typeFilter) {
+        const safeType = typeFilter.replace(/`/g, '\\`').replace(/'/g, "''");
+        conditions.push(`\`type\` = '${safeType}'`);
+    }
+    // Normalize boundary to array
+    const prefixes = boundary
+        ? (Array.isArray(boundary) ? boundary : [boundary]).filter((b) => b.length > 0)
+        : [];
+    if (prefixes.length > 0) {
+        const orClauses = prefixes
+            .map((p) => `\`filePath\` LIKE '${escapeBoundaryPrefix(p)}%'`)
+            .join(' OR ');
+        conditions.push(prefixes.length > 1 ? `(${orClauses})` : orClauses);
+    }
+    return conditions.length > 0 ? conditions.join(' AND ') : undefined;
+}
+/** Convert a raw LanceDB row to a SearchResult. */
+function rowToSearchResult(row) {
+    return {
+        content: row['content'],
+        contextPrefix: row['contextPrefix'],
+        filePath: row['filePath'],
+        type: row['type'],
+        label: row['label'],
+        score: row['_distance'] != null ? 1 / (1 + row['_distance']) : 0,
+        metadata: JSON.parse(row['metadata'] || '{}'),
+    };
+}
+/**
+ * Reciprocal Rank Fusion — merges two ranked result lists.
+ * score(d) = Σ 1 / (k + rank_in_list) for each list containing d.
+ */
+function rrfMerge(listA, listB, limit) {
+    const scores = new Map();
+    for (const list of [listA, listB]) {
+        for (const { row, rank, id } of list) {
+            const entry = scores.get(id) ?? { score: 0, row };
+            entry.score += 1 / (RRF_K + rank);
+            scores.set(id, entry);
+        }
+    }
+    return [...scores.values()]
+        .sort((a, b) => b.score - a.score)
+        .slice(0, limit)
+        .map(({ score, row }) => ({ ...rowToSearchResult(row), score }));
+}
+//# sourceMappingURL=lance-search.js.map

package/dist/store/lance-search.js.map

@@ -0,0 +1 @@
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package/dist/store/lance-store.d.ts

@@ -38,16 +38,6 @@ export declare class LanceStore {
      * Falls back to vector-only if no FTS index exists.
      */
     search(options: SearchOptions): Promise<SearchResult[]>;
-    /** Pure vector search (original behavior). */
-    private vectorSearch;
-    /**
-     * Hybrid search: runs vector + FTS in parallel, merges with RRF.
-     * Each leg fetches `maxResults * HYBRID_OVERFETCH_FACTOR` candidates
-     * to give RRF enough diversity to produce `maxResults` fused results.
-     */
-    private hybridSearch;
-    private runVectorLeg;
-    private runFtsLeg;
     /** Delete all chunks from a specific file (for incremental re-index). */
     deleteByFile(filePath: string): Promise<void>;
     /** Drop the entire table. Used for full re-index. */

package/dist/store/lance-store.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"lance-store.d.ts","sourceRoot":"","sources":["../../src/store/lance-store.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,0BAA0B,CAAC;AACzD,OAAO,KAAK,EACV,KAAK,EACL,iBAAiB,EACjB,aAAa,EACb,YAAY,EAEb,MAAM,aAAa,CAAC;AAarB,qBAAa,UAAU;IACrB,OAAO,CAAC,EAAE,CAAmC;IAC7C,OAAO,CAAC,KAAK,CAA8B;IAC3C,OAAO,CAAC,MAAM,CAAS;IACvB,OAAO,CAAC,QAAQ,CAAW;IAC3B,OAAO,CAAC,WAAW,CAAS;IAC5B,OAAO,CAAC,MAAM,CAAwB;gBAE1B,MAAM,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,CAAC,GAAG,EAAE,MAAM,KAAK,IAAI;IAM9E;;;;OAIG;IACG,OAAO,IAAI,OAAO,CAAC,IAAI,CAAC;IA8B9B,8EAA8E;YAChE,oBAAoB;IAalC,gEAAgE;IAChE,OAAO,CAAC,eAAe;IAcvB,6DAA6D;YAC/C,YAAY;IAiB1B,uDAAuD;IACjD,MAAM,CAAC,MAAM,EAAE,KAAK,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IA+B5C;;;;;OAKG;IACG,cAAc,IAAI,OAAO,CAAC,IAAI,CAAC;IAiBrC,sDAAsD;YACxC,cAAc;IAiB5B,4DAA4D;IAC5D,IAAI,aAAa,IAAI,OAAO,CAE3B;IAED;;;OAGG;IACG,MAAM,CAAC,OAAO,EAAE,aAAa,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC;IAc7D,8CAA8C;YAChC,YAAY;IAiB1B;;;;OAIG;YACW,YAAY;YAqBZ,YAAY;YAgBZ,SAAS;IAyBvB,yEAAyE;IACnE,YAAY,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAMnD,qDAAqD;IAC/C,KAAK,IAAI,OAAO,CAAC,IAAI,CAAC;IAW5B,kFAAkF;IAC5E,SAAS,IAAI,OAAO,CAAC,IAAI,CAAC;IAOhC,+DAA+D;IACzD,OAAO,IAAI,OAAO,CAAC,OAAO,CAAC;IAKjC,4CAA4C;IACtC,KAAK,IAAI,OAAO,CAAC;QAAE,WAAW,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAA;KAAE,CAAC;IAe/E,mFAAmF;IAC7E,WAAW,IAAI,OAAO,CAAC,iBAAiB,CAAC;CA4FhD"}
+{"version":3,"file":"lance-store.d.ts","sourceRoot":"","sources":["../../src/store/lance-store.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,0BAA0B,CAAC;AACzD,OAAO,KAAK,EACV,KAAK,EACL,iBAAiB,EACjB,aAAa,EACb,YAAY,EAEb,MAAM,aAAa,CAAC;AAKrB,qBAAa,UAAU;IACrB,OAAO,CAAC,EAAE,CAAmC;IAC7C,OAAO,CAAC,KAAK,CAA8B;IAC3C,OAAO,CAAC,MAAM,CAAS;IACvB,OAAO,CAAC,QAAQ,CAAW;IAC3B,OAAO,CAAC,WAAW,CAAS;IAC5B,OAAO,CAAC,MAAM,CAAwB;gBAE1B,MAAM,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,CAAC,EAAE,CAAC,GAAG,EAAE,MAAM,KAAK,IAAI;IAM9E;;;;OAIG;IACG,OAAO,IAAI,OAAO,CAAC,IAAI,CAAC;IA8B9B,8EAA8E;YAChE,oBAAoB;IAalC,gEAAgE;IAChE,OAAO,CAAC,eAAe;IAcvB,6DAA6D;YAC/C,YAAY;IAiB1B,uDAAuD;IACjD,MAAM,CAAC,MAAM,EAAE,KAAK,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IA+B5C;;;;;OAKG;IACG,cAAc,IAAI,OAAO,CAAC,IAAI,CAAC;IAiBrC,sDAAsD;YACxC,cAAc;IAiB5B,4DAA4D;IAC5D,IAAI,aAAa,IAAI,OAAO,CAE3B;IAED;;;OAGG;IACG,MAAM,CAAC,OAAO,EAAE,aAAa,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC;IA6B7D,yEAAyE;IACnE,YAAY,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAMnD,qDAAqD;IAC/C,KAAK,IAAI,OAAO,CAAC,IAAI,CAAC;IAW5B,kFAAkF;IAC5E,SAAS,IAAI,OAAO,CAAC,IAAI,CAAC;IAOhC,+DAA+D;IACzD,OAAO,IAAI,OAAO,CAAC,OAAO,CAAC;IAKjC,4CAA4C;IACtC,KAAK,IAAI,OAAO,CAAC;QAAE,WAAW,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAA;KAAE,CAAC;IAe/E,mFAAmF;IAC7E,WAAW,IAAI,OAAO,CAAC,iBAAiB,CAAC;CAShD"}

package/dist/store/lance-store.js

@@ -1,15 +1,9 @@
 import { randomUUID } from 'node:crypto';
 import * as fs from 'node:fs';
 import * as lancedb from '@lancedb/lancedb';
+import { runHealthCheck } from './lance-health.js';
 import { TOTEM_TABLE_NAME } from './lance-schema.js';
-/** RRF constant — standard value from the original RRF paper. */
-const RRF_K = 60;
-/**
- * Number of extra candidates to fetch per search leg during hybrid search.
- * We fetch more than `maxResults` per leg so that after RRF fusion we
- * still have enough results even when the two legs return different sets.
- */
-const HYBRID_OVERFETCH_FACTOR = 3;
+import { runHybridSearch, runVectorSearch } from './lance-search.js';
 export class LanceStore {
     db = null;
     table = null;
@@ -178,67 +172,9 @@ export class LanceStore {
         const boundary = options.boundary;
         const useHybrid = (options.hybrid ?? true) && this.hasFtsIndex;
         if (useHybrid) {
-            return this.hybridSearch(options.query, options.typeFilter, maxResults, boundary);
-        }
-        return this.vectorSearch(options.query, options.typeFilter, maxResults, boundary);
-    }
-    /** Pure vector search (original behavior). */
-    async vectorSearch(query, typeFilter, maxResults, boundary) {
-        const [queryVector] = await this.embedder.embed([query]);
-        let q = this.table.vectorSearch(queryVector).limit(maxResults);
-        const whereClause = buildWhereClause(typeFilter, boundary);
-        if (whereClause)
-            q = q.where(whereClause);
-        const results = await q.toArray();
-        return results.map(rowToSearchResult);
-    }
-    /**
-     * Hybrid search: runs vector + FTS in parallel, merges with RRF.
-     * Each leg fetches `maxResults * HYBRID_OVERFETCH_FACTOR` candidates
-     * to give RRF enough diversity to produce `maxResults` fused results.
-     */
-    async hybridSearch(query, typeFilter, maxResults, boundary) {
-        const fetchCount = maxResults * HYBRID_OVERFETCH_FACTOR;
-        const whereClause = buildWhereClause(typeFilter, boundary);
-        const [queryVector] = await this.embedder.embed([query]);
-        // Run both legs in parallel
-        const [vectorResults, ftsResults] = await Promise.all([
-            this.runVectorLeg(queryVector, whereClause, fetchCount),
-            this.runFtsLeg(query, whereClause, fetchCount),
-        ]);
-        // Merge with RRF
-        return rrfMerge(vectorResults, ftsResults, maxResults);
-    }
-    async runVectorLeg(queryVector, whereClause, limit) {
-        let q = this.table.vectorSearch(queryVector).limit(limit).withRowId();
-        if (whereClause)
-            q = q.where(whereClause);
-        const rows = await q.toArray();
-        return rows.map((row, rank) => ({
-            row,
-            rank: rank + 1,
-            id: String(row['_rowid'] ?? row['id']),
-        }));
-    }
-    async runFtsLeg(query, whereClause, limit) {
-        try {
-            let q = this.table.search(query, 'fts', 'content').withRowId();
-            if (whereClause)
-                q = q.where(whereClause);
-            q = q.limit(limit);
-            const rows = await q.toArray();
-            return rows.map((row, rank) => ({
-                row,
-                rank: rank + 1,
-                id: String(row['_rowid'] ?? row['id']),
-            }));
-        }
-        catch (err) {
-            // FTS leg failed — degrade gracefully
-            const msg = err instanceof Error ? err.message : String(err);
-            this.onWarn(`FTS search failed, falling back to vector-only: ${msg}`);
-            return [];
+            return runHybridSearch(this.table, this.embedder, this.onWarn, options.query, options.typeFilter, maxResults, boundary);
         }
+        return runVectorSearch(this.table, this.embedder, options.query, options.typeFilter, maxResults, boundary);
     }
     /** Delete all chunks from a specific file (for incremental re-index). */
     async deleteByFile(filePath) {
@@ -286,154 +222,7 @@ export class LanceStore {
     }
     /** Run a health check against the index, verifying dimensions, search, and FTS. */
     async healthCheck() {
-        const start = Date.now();
-        const issues = [];
-        let totalChunks = 0;
-        let storedDimensions = null;
-        let dimensionMatch = false;
-        let canarySearchOk = false;
-        let ftsAvailable = false;
-        const expectedDimensions = this.embedder.dimensions;
-        // 1. Count rows and check dimensions
-        try {
-            if (this.table) {
-                totalChunks = await this.table.countRows();
-                if (totalChunks > 0) {
-                    // Read one row to get stored vector dimensions
-                    const rows = await this.table.query().select(['vector']).limit(1).toArray();
-                    if (rows.length > 0) {
-                        const raw = rows[0]['vector'];
-                        // LanceDB may return Arrow FixedSizeList — coerce to plain array
-                        const vec = Array.isArray(raw)
-                            ? raw
-                            : raw && typeof raw.toArray === 'function'
-                                ? raw.toArray()
-                                : raw && typeof raw.length === 'number'
-                                    ? Array.from(raw)
-                                    : null;
-                        if (vec) {
-                            storedDimensions = vec.length;
-                            dimensionMatch = storedDimensions === expectedDimensions;
-                            if (!dimensionMatch) {
-                                issues.push(`Dimension mismatch: embedder expects ${expectedDimensions} but stored vectors have ${storedDimensions}`);
-                            }
-                        }
-                        else {
-                            issues.push('Could not read vector column from stored row');
-                        }
-                    }
-                }
-                else {
-                    // Empty table — dimensions can't be verified but that's OK
-                    dimensionMatch = true;
-                }
-            }
-            else {
-                // No table — treat as empty, still healthy
-                dimensionMatch = true;
-            }
-        }
-        catch (err) {
-            const msg = err instanceof Error ? err.message : String(err);
-            issues.push(`Dimension check failed: ${msg}`);
-        }
-        // 2. Canary search — embed a probe string and run a search
-        try {
-            if (this.table && totalChunks > 0) {
-                await this.search({ query: 'totem health check canary', maxResults: 1, hybrid: false });
-                canarySearchOk = true;
-            }
-            else {
-                // No data to search — canary is trivially OK
-                canarySearchOk = true;
-            }
-        }
-        catch (err) {
-            const msg = err instanceof Error ? err.message : String(err);
-            issues.push(`Canary search failed: ${msg}`);
-        }
-        // 3. FTS availability
-        try {
-            await this.detectFtsIndex();
-            ftsAvailable = this.hasFtsIndex;
-        }
-        catch (err) {
-            const msg = err instanceof Error ? err.message : String(err);
-            issues.push(`FTS detection failed: ${msg}`);
-        }
-        const durationMs = Date.now() - start;
-        const healthy = issues.length === 0;
-        return {
-            healthy,
-            durationMs,
-            totalChunks,
-            expectedDimensions,
-            storedDimensions,
-            dimensionMatch,
-            canarySearchOk,
-            ftsAvailable,
-            issues,
-        };
-    }
-}
-/** Escape a single boundary prefix for use in a SQL LIKE clause. */
-function escapeBoundaryPrefix(raw) {
-    // Normalize Windows backslashes to forward slashes
-    const normalized = raw.replace(/\\/g, '/');
-    // Escape SQL LIKE wildcards (%, _), backticks, and single quotes
-    return normalized
-        .replace(/`/g, '\\`')
-        .replace(/%/g, '\\%')
-        .replace(/_/g, '\\_')
-        .replace(/'/g, "''");
-}
-/** Build a SQL WHERE clause from optional type and boundary filters. */
-function buildWhereClause(typeFilter, boundary) {
-    const conditions = [];
-    if (typeFilter) {
-        const safeType = typeFilter.replace(/`/g, '\\`').replace(/'/g, "''");
-        conditions.push(`\`type\` = '${safeType}'`);
-    }
-    // Normalize boundary to array
-    const prefixes = boundary
-        ? (Array.isArray(boundary) ? boundary : [boundary]).filter((b) => b.length > 0)
-        : [];
-    if (prefixes.length > 0) {
-        const orClauses = prefixes
-            .map((p) => `\`filePath\` LIKE '${escapeBoundaryPrefix(p)}%'`)
-            .join(' OR ');
-        conditions.push(prefixes.length > 1 ? `(${orClauses})` : orClauses);
-    }
-    return conditions.length > 0 ? conditions.join(' AND ') : undefined;
-}
-/** Convert a raw LanceDB row to a SearchResult. */
-function rowToSearchResult(row) {
-    return {
-        content: row['content'],
-        contextPrefix: row['contextPrefix'],
-        filePath: row['filePath'],
-        type: row['type'],
-        label: row['label'],
-        score: row['_distance'] != null ? 1 / (1 + row['_distance']) : 0,
-        metadata: JSON.parse(row['metadata'] || '{}'),
-    };
-}
-/**
- * Reciprocal Rank Fusion — merges two ranked result lists.
- * score(d) = Σ 1 / (k + rank_in_list) for each list containing d.
- */
-function rrfMerge(listA, listB, limit) {
-    const scores = new Map();
-    for (const list of [listA, listB]) {
-        for (const { row, rank, id } of list) {
-            const entry = scores.get(id) ?? { score: 0, row };
-            entry.score += 1 / (RRF_K + rank);
-            scores.set(id, entry);
-        }
+        return runHealthCheck(this.table, this.embedder, (options) => this.search(options), () => this.detectFtsIndex(), () => this.hasFtsIndex);
     }
-    return [...scores.values()]
-        .sort((a, b) => b.score - a.score)
-        .slice(0, limit)
-        .map(({ score, row }) => ({ ...rowToSearchResult(row), score }));
 }
 //# sourceMappingURL=lance-store.js.map

package/dist/store/lance-store.js.map

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package/dist/suspicious-lesson.d.ts

@@ -0,0 +1,35 @@
+export interface ExtractedLesson {
+    heading?: string;
+    tags: string[];
+    text: string;
+    suspiciousFlags?: string[];
+}
+export declare const MAX_SUSPICIOUS_HEADING_LENGTH = 60;
+/** Defensive keywords suggesting instructional/security discussion context. */
+export declare const DEFENSIVE_KEYWORD_RE: RegExp;
+/** Characters of context to check around a match for defensive keywords. */
+export declare const DEFENSIVE_PROXIMITY_WINDOW = 100;
+/**
+ * Collect all [start, end] ranges of code-fenced regions in the text.
+ * Uses inline regexes via matchAll to avoid module-level global state mutation.
+ */
+export declare function collectCodeRanges(text: string): Array<[number, number]>;
+/**
+ * Check if ALL matches of a pattern in text occur in instructional context
+ * (inside backticks/code blocks AND near defensive keywords).
+ * Both conditions must be met for EVERY match to suppress a flag.
+ * If any single match is outside instructional context, returns false (fail closed).
+ */
+export declare function isInstructionalContext(text: string, // totem-ignore
+pattern: RegExp, codeRanges?: Array<[number, number]>): boolean;
+/**
+ * Scans extracted lessons for heuristic indicators of prompt injection or
+ * LLM constraint violations. Returns a new array with `suspiciousFlags`
+ * populated on any lesson that triggers one or more checks.
+ *
+ * For XML tag and instructional leakage patterns, a context-aware heuristic
+ * suppresses false positives: if the match is inside backticks/code fences
+ * AND defensive keywords are nearby, it's treated as instructional discussion.
+ */
+export declare function flagSuspiciousLessons(lessons: ExtractedLesson[]): ExtractedLesson[];
+//# sourceMappingURL=suspicious-lesson.d.ts.map

package/dist/suspicious-lesson.d.ts.map

@@ -0,0 +1 @@
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package/dist/suspicious-lesson.js

@@ -0,0 +1,99 @@
+import { BASE64_BLOB_RE, INSTRUCTIONAL_LEAKAGE_RE, UNICODE_ESCAPE_RE, XML_TAG_LEAKAGE_RE, } from './sanitize.js';
+// ─── Constants ──────────────────────────────────────────
+export const MAX_SUSPICIOUS_HEADING_LENGTH = 60;
+/** Defensive keywords suggesting instructional/security discussion context. */
+export const DEFENSIVE_KEYWORD_RE = /\b(?:detect|prevent|harden|defense|defensive|strip|flag|mitigat|sanitiz|block|neutraliz|scrub|filter|reject|validat|protect|guard|secur)\w*\b/i;
+/** Characters of context to check around a match for defensive keywords. */
+export const DEFENSIVE_PROXIMITY_WINDOW = 100;
+// ─── Helpers ────────────────────────────────────────────
+/**
+ * Collect all [start, end] ranges of code-fenced regions in the text.
+ * Uses inline regexes via matchAll to avoid module-level global state mutation.
+ */
+// totem-ignore-next-line
+export function collectCodeRanges(text) {
+    const ranges = [];
+    // Fenced blocks first (higher priority — consume triple backticks before singles)
+    for (const match of text.matchAll(/```[\s\S]*?```/g)) {
+        ranges.push([match.index, match.index + match[0].length]);
+    }
+    for (const match of text.matchAll(/`[^`\n]+`/g)) {
+        const start = match.index;
+        const end = start + match[0].length;
+        // Skip if this range overlaps with a fenced block
+        const overlaps = ranges.some(([rs, re]) => start >= rs && end <= re);
+        if (!overlaps) {
+            ranges.push([start, end]);
+        }
+    }
+    return ranges;
+}
+/**
+ * Check if ALL matches of a pattern in text occur in instructional context
+ * (inside backticks/code blocks AND near defensive keywords).
+ * Both conditions must be met for EVERY match to suppress a flag.
+ * If any single match is outside instructional context, returns false (fail closed).
+ */
+export function isInstructionalContext(text, // totem-ignore
+pattern, codeRanges) {
+    // Create global copy to iterate all matches — guard against duplicate 'g' flag
+    const flags = pattern.flags.includes('g') ? pattern.flags : pattern.flags + 'g';
+    const globalPattern = new RegExp(pattern.source, flags);
+    const ranges = codeRanges ?? collectCodeRanges(text);
+    let foundAny = false;
+    for (const match of text.matchAll(globalPattern)) {
+        foundAny = true;
+        const matchStart = match.index;
+        const matchEnd = matchStart + match[0].length;
+        // Condition 1: Match must fall within a code-fenced region
+        const inCode = ranges.some(([rs, re]) => matchStart >= rs && matchEnd <= re);
+        if (!inCode)
+            return false;
+        // Condition 2: Defensive keywords must be nearby (outside the match itself)
+        // Space delimiter prevents cross-boundary keyword synthesis
+        const windowStart = Math.max(0, matchStart - DEFENSIVE_PROXIMITY_WINDOW);
+        const windowEnd = Math.min(text.length, matchEnd + DEFENSIVE_PROXIMITY_WINDOW);
+        const surroundingText = text.slice(windowStart, matchStart) + ' ' + text.slice(matchEnd, windowEnd);
+        if (!DEFENSIVE_KEYWORD_RE.test(surroundingText))
+            return false;
+    }
+    return foundAny;
+}
+// ─── Main detection ─────────────────────────────────────
+/**
+ * Scans extracted lessons for heuristic indicators of prompt injection or
+ * LLM constraint violations. Returns a new array with `suspiciousFlags`
+ * populated on any lesson that triggers one or more checks.
+ *
+ * For XML tag and instructional leakage patterns, a context-aware heuristic
+ * suppresses false positives: if the match is inside backticks/code fences
+ * AND defensive keywords are nearby, it's treated as instructional discussion.
+ */
+export function flagSuspiciousLessons(lessons) {
+    return lessons.map((lesson) => {
+        const flags = [];
+        const heading = lesson.heading ?? '';
+        const combined = `${heading} ${lesson.text}`;
+        if (heading.length > MAX_SUSPICIOUS_HEADING_LENGTH) {
+            flags.push('Heading exceeds 60 characters');
+        }
+        // Compute code ranges once per lesson for both context-aware checks
+        const codeRanges = collectCodeRanges(combined);
+        if (INSTRUCTIONAL_LEAKAGE_RE.test(combined) &&
+            !isInstructionalContext(combined, INSTRUCTIONAL_LEAKAGE_RE, codeRanges)) {
+            flags.push('Contains potential instructional leakage');
+        }
+        if (XML_TAG_LEAKAGE_RE.test(combined) &&
+            !isInstructionalContext(combined, XML_TAG_LEAKAGE_RE, codeRanges)) {
+            flags.push('Contains system XML tags');
+        }
+        if (BASE64_BLOB_RE.test(combined)) {
+            flags.push('Contains potential Base64 payload');
+        }
+        if (UNICODE_ESCAPE_RE.test(combined)) {
+            flags.push('Contains excessive unicode escapes');
+        }
+        return flags.length > 0 ? { ...lesson, suspiciousFlags: flags } : lesson;
+    });
+}
+//# sourceMappingURL=suspicious-lesson.js.map

package/dist/suspicious-lesson.js.map

@@ -0,0 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@mmnto/totem",
-  "version": "1.3.15",
+  "version": "1.3.17",
   "description": "Persistent memory and context layer for AI agents",
   "type": "module",
   "main": "./dist/index.js",