@mmnto/cli 0.7.0 → 0.9.0

package/dist/commands/learn.test.js

@@ -1,8 +1,9 @@
 import * as fs from 'node:fs';
 import * as os from 'node:os';
 import * as path from 'node:path';
+import { Readable, Writable } from 'node:stream';
 import { afterEach, beforeEach, describe, expect, it } from 'vitest';
-import { appendLessons, parseLessons } from './learn.js';
+import { appendLessons, confirmLessons, parseLessons } from './learn.js';
 // ─── parseLessons ───────────────────────────────────────
 describe('parseLessons', () => {
     it('extracts a single lesson', () => {
@@ -64,6 +65,7 @@ Tags: empty
         expect(lessons).toEqual([]);
     });
 });
+// sanitize tests are in utils.test.ts (sanitize now lives in utils.ts)
 // ─── appendLessons ──────────────────────────────────────
 describe('appendLessons', () => {
     let tmpDir;
@@ -108,4 +110,60 @@ describe('appendLessons', () => {
         expect(content).toMatch(/## Lesson — \d{4}-\d{2}-\d{2}T\d{2}:\d{2}:\d{2}/);
     });
 });
+// ─── confirmLessons ─────────────────────────────────────
+function makeInput(response) {
+    const input = new Readable({ read() { } });
+    // Push response after a tick so readline can consume it
+    setImmediate(() => {
+        input.push(response + '\n');
+        input.push(null);
+    });
+    return input;
+}
+const nullOutput = new Writable({
+    write(_chunk, _enc, cb) {
+        cb();
+    },
+});
+describe('confirmLessons', () => {
+    it('returns true when --yes is set', async () => {
+        const result = await confirmLessons(3, { yes: true, isTTY: false });
+        expect(result).toBe(true);
+    });
+    it('throws in non-TTY without --yes', async () => {
+        await expect(confirmLessons(3, { isTTY: false })).rejects.toThrow('[Totem Error] Refusing to write lessons in non-interactive mode. Use --yes to bypass confirmation.');
+    });
+    it('returns true when user confirms with empty input (default Y)', async () => {
+        const result = await confirmLessons(2, {
+            isTTY: true,
+            input: makeInput(''),
+            output: nullOutput,
+        });
+        expect(result).toBe(true);
+    });
+    it('returns true when user types y', async () => {
+        const result = await confirmLessons(2, {
+            isTTY: true,
+            input: makeInput('y'),
+            output: nullOutput,
+        });
+        expect(result).toBe(true);
+    });
+    it('returns false when user types n', async () => {
+        const result = await confirmLessons(2, {
+            isTTY: true,
+            input: makeInput('n'),
+            output: nullOutput,
+        });
+        expect(result).toBe(false);
+    });
+    it('returns false when user types N', async () => {
+        const result = await confirmLessons(1, {
+            isTTY: true,
+            input: makeInput('N'),
+            output: nullOutput,
+        });
+        expect(result).toBe(false);
+    });
+});
 //# sourceMappingURL=learn.test.js.map

package/dist/commands/learn.test.js.map

@@ -1 +1 @@
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package/dist/commands/search.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"search.d.ts","sourceRoot":"","sources":["../../src/commands/search.ts"],"names":[],"mappings":"AAOA,wBAAsB,aAAa,CACjC,KAAK,EAAE,MAAM,EACb,OAAO,EAAE;IAAE,IAAI,CAAC,EAAE,MAAM,CAAC;IAAC,UAAU,CAAC,EAAE,MAAM,CAAA;CAAE,GAC9C,OAAO,CAAC,IAAI,CAAC,CAkCf"}
+{"version":3,"file":"search.d.ts","sourceRoot":"","sources":["../../src/commands/search.ts"],"names":[],"mappings":"AAOA,wBAAsB,aAAa,CACjC,KAAK,EAAE,MAAM,EACb,OAAO,EAAE;IAAE,IAAI,CAAC,EAAE,MAAM,CAAC;IAAC,UAAU,CAAC,EAAE,MAAM,CAAA;CAAE,GAC9C,OAAO,CAAC,IAAI,CAAC,CAqCf"}

package/dist/commands/search.js

@@ -1,6 +1,6 @@
 import * as path from 'node:path';
 import { ContentTypeSchema, createEmbedder, LanceStore } from '@mmnto/totem';
-import { loadConfig, loadEnv, resolveConfigPath } from '../utils.js';
+import { loadConfig, loadEnv, resolveConfigPath, sanitize } from '../utils.js';
 export async function searchCommand(query, options) {
     const cwd = process.cwd();
     const configPath = resolveConfigPath(cwd);
@@ -23,9 +23,10 @@ export async function searchCommand(query, options) {
         return;
     }
     for (const result of results) {
-        console.log(`\n--- ${result.label} (${result.type}) ---`);
-        console.log(`File: ${result.filePath} | Score: ${result.score.toFixed(3)}`);
-        console.log(result.content.slice(0, 200) + (result.content.length > 200 ? '...' : ''));
+        console.log(`\n--- ${sanitize(result.label).replace(/\n/g, ' ')} (${result.type}) ---`);
+        console.log(`File: ${sanitize(result.filePath).replace(/\n/g, ' ')} | Score: ${result.score.toFixed(3)}`);
+        const snippet = result.content.slice(0, 200) + (result.content.length > 200 ? '...' : '');
+        console.log(sanitize(snippet));
     }
 }
 //# sourceMappingURL=search.js.map

package/dist/commands/search.js.map

@@ -1 +1 @@
-{"version":3,"file":"search.js","sourceRoot":"","sources":["../../src/commands/search.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAGlC,OAAO,EAAE,iBAAiB,EAAE,cAAc,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAE7E,OAAO,EAAE,UAAU,EAAE,OAAO,EAAE,iBAAiB,EAAE,MAAM,aAAa,CAAC;AAErE,MAAM,CAAC,KAAK,UAAU,aAAa,CACjC,KAAa,EACb,OAA+C;IAE/C,MAAM,GAAG,GAAG,OAAO,CAAC,GAAG,EAAE,CAAC;IAC1B,MAAM,UAAU,GAAG,iBAAiB,CAAC,GAAG,CAAC,CAAC;IAE1C,OAAO,CAAC,GAAG,CAAC,CAAC;IAEb,MAAM,MAAM,GAAG,MAAM,UAAU,CAAC,UAAU,CAAC,CAAC;IAC5C,MAAM,QAAQ,GAAG,cAAc,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;IAClD,MAAM,KAAK,GAAG,IAAI,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG,EAAE,MAAM,CAAC,QAAQ,CAAC,EAAE,QAAQ,CAAC,CAAC;IACxE,MAAM,KAAK,CAAC,OAAO,EAAE,CAAC;IAEtB,MAAM,WAAW,GAAG,iBAAiB,CAAC,OAAO,CAAC;IAC9C,IAAI,OAAO,CAAC,IAAI,IAAI,CAAC,WAAW,CAAC,QAAQ,CAAC,OAAO,CAAC,IAAmB,CAAC,EAAE,CAAC;QACvE,MAAM,IAAI,KAAK,CACb,uCAAuC,OAAO,CAAC,IAAI,uBAAuB,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CACnG,CAAC;IACJ,CAAC;IAED,MAAM,OAAO,GAAG,MAAM,KAAK,CAAC,MAAM,CAAC;QACjC,KAAK;QACL,UAAU,EAAE,OAAO,CAAC,IAA+B;QACnD,UAAU,EAAE,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,UAAU,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;KACtE,CAAC,CAAC;IAEH,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzB,OAAO,CAAC,GAAG,CAAC,2BAA2B,CAAC,CAAC;QACzC,OAAO;IACT,CAAC;IAED,KAAK,MAAM,MAAM,IAAI,OAAO,EAAE,CAAC;QAC7B,OAAO,CAAC,GAAG,CAAC,SAAS,MAAM,CAAC,KAAK,KAAK,MAAM,CAAC,IAAI,OAAO,CAAC,CAAC;QAC1D,OAAO,CAAC,GAAG,CAAC,SAAS,MAAM,CAAC,QAAQ,aAAa,MAAM,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC;QAC5E,OAAO,CAAC,GAAG,CAAC,MAAM,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,OAAO,CAAC,MAAM,GAAG,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IACzF,CAAC;AACH,CAAC"}
+{"version":3,"file":"search.js","sourceRoot":"","sources":["../../src/commands/search.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAGlC,OAAO,EAAE,iBAAiB,EAAE,cAAc,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAE7E,OAAO,EAAE,UAAU,EAAE,OAAO,EAAE,iBAAiB,EAAE,QAAQ,EAAE,MAAM,aAAa,CAAC;AAE/E,MAAM,CAAC,KAAK,UAAU,aAAa,CACjC,KAAa,EACb,OAA+C;IAE/C,MAAM,GAAG,GAAG,OAAO,CAAC,GAAG,EAAE,CAAC;IAC1B,MAAM,UAAU,GAAG,iBAAiB,CAAC,GAAG,CAAC,CAAC;IAE1C,OAAO,CAAC,GAAG,CAAC,CAAC;IAEb,MAAM,MAAM,GAAG,MAAM,UAAU,CAAC,UAAU,CAAC,CAAC;IAC5C,MAAM,QAAQ,GAAG,cAAc,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;IAClD,MAAM,KAAK,GAAG,IAAI,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG,EAAE,MAAM,CAAC,QAAQ,CAAC,EAAE,QAAQ,CAAC,CAAC;IACxE,MAAM,KAAK,CAAC,OAAO,EAAE,CAAC;IAEtB,MAAM,WAAW,GAAG,iBAAiB,CAAC,OAAO,CAAC;IAC9C,IAAI,OAAO,CAAC,IAAI,IAAI,CAAC,WAAW,CAAC,QAAQ,CAAC,OAAO,CAAC,IAAmB,CAAC,EAAE,CAAC;QACvE,MAAM,IAAI,KAAK,CACb,uCAAuC,OAAO,CAAC,IAAI,uBAAuB,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CACnG,CAAC;IACJ,CAAC;IAED,MAAM,OAAO,GAAG,MAAM,KAAK,CAAC,MAAM,CAAC;QACjC,KAAK;QACL,UAAU,EAAE,OAAO,CAAC,IAA+B;QACnD,UAAU,EAAE,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,UAAU,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;KACtE,CAAC,CAAC;IAEH,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzB,OAAO,CAAC,GAAG,CAAC,2BAA2B,CAAC,CAAC;QACzC,OAAO;IACT,CAAC;IAED,KAAK,MAAM,MAAM,IAAI,OAAO,EAAE,CAAC;QAC7B,OAAO,CAAC,GAAG,CAAC,SAAS,QAAQ,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG,CAAC,KAAK,MAAM,CAAC,IAAI,OAAO,CAAC,CAAC;QACxF,OAAO,CAAC,GAAG,CACT,SAAS,QAAQ,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG,CAAC,aAAa,MAAM,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAC7F,CAAC;QACF,MAAM,OAAO,GAAG,MAAM,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,EAAE,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,OAAO,CAAC,MAAM,GAAG,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC;QAC1F,OAAO,CAAC,GAAG,CAAC,QAAQ,CAAC,OAAO,CAAC,CAAC,CAAC;IACjC,CAAC;AACH,CAAC"}

package/dist/commands/shield.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"shield.d.ts","sourceRoot":"","sources":["../../src/commands/shield.ts"],"names":[],"mappings":"AA2IA,wBAAgB,YAAY,CAAC,OAAO,EAAE,MAAM,GAAG;IAAE,IAAI,EAAE,OAAO,CAAC;IAAC,MAAM,EAAE,MAAM,CAAA;CAAE,GAAG,IAAI,CAItF;AAID,MAAM,WAAW,aAAa;IAC5B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,GAAG,CAAC,EAAE,MAAM,CAAC;IACb,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED,wBAAsB,aAAa,CAAC,OAAO,EAAE,aAAa,GAAG,OAAO,CAAC,IAAI,CAAC,CAgEzE"}
+{"version":3,"file":"shield.d.ts","sourceRoot":"","sources":["../../src/commands/shield.ts"],"names":[],"mappings":"AAkJA,wBAAgB,YAAY,CAAC,OAAO,EAAE,MAAM,GAAG;IAAE,IAAI,EAAE,OAAO,CAAC;IAAC,MAAM,EAAE,MAAM,CAAA;CAAE,GAAG,IAAI,CAItF;AAID,MAAM,WAAW,aAAa;IAC5B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,GAAG,CAAC,EAAE,MAAM,CAAC;IACb,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED,wBAAsB,aAAa,CAAC,OAAO,EAAE,aAAa,GAAG,OAAO,CAAC,IAAI,CAAC,CAkEzE"}

package/dist/commands/shield.js

@@ -1,7 +1,8 @@
 import * as path from 'node:path';
 import { createEmbedder, LanceStore } from '@mmnto/totem';
 import { extractChangedFiles, getDefaultBranch, getGitBranchDiff, getGitDiff } from '../git.js';
-import { formatResults, loadConfig, loadEnv, resolveConfigPath, runOrchestrator, wrapXml, writeOutput, } from '../utils.js';
+import { bold, errorColor, log, success as successColor } from '../ui.js';
+import { formatResults, getSystemPrompt, loadConfig, loadEnv, resolveConfigPath, runOrchestrator, wrapXml, writeOutput, } from '../utils.js';
 // ─── Constants ──────────────────────────────────────────
 const TAG = 'Shield';
 const MAX_DIFF_CHARS = 50_000;
@@ -63,8 +64,8 @@ function buildSearchQuery(changedFiles, diff) {
     return `${fileNames} ${diffSnippet}`.trim();
 }
 // ─── Prompt assembly ────────────────────────────────────
-function assemblePrompt(diff, changedFiles, context) {
-    const sections = [SYSTEM_PROMPT];
+function assemblePrompt(diff, changedFiles, context, systemPrompt) {
+    const sections = [systemPrompt];
     // Diff section
     sections.push('=== DIFF ===');
     sections.push(`Changed files: ${changedFiles.join(', ')}`);
@@ -108,47 +109,51 @@ export async function shieldCommand(options) {
     const config = await loadConfig(configPath);
     // Get git diff — try uncommitted/staged first, fall back to branch diff vs main
     const mode = options.staged ? 'staged' : 'all';
-    console.error(`[${TAG}] Getting ${mode === 'staged' ? 'staged' : 'uncommitted'} diff...`);
+    log.info(TAG, `Getting ${mode === 'staged' ? 'staged' : 'uncommitted'} diff...`);
     let diff = getGitDiff(mode, cwd);
     if (!diff.trim()) {
         const base = getDefaultBranch(cwd);
-        console.error(`[${TAG}] No uncommitted changes. Falling back to branch diff (${base}...HEAD)...`);
+        log.dim(TAG, `No uncommitted changes. Falling back to branch diff (${base}...HEAD)...`);
         diff = getGitBranchDiff(cwd, base);
     }
     if (!diff.trim()) {
-        console.error(`[${TAG}] No changes detected. Nothing to review.`);
+        log.warn(TAG, 'No changes detected. Nothing to review.');
         return;
     }
     const changedFiles = extractChangedFiles(diff);
-    console.error(`[${TAG}] Changed files (${changedFiles.length}): ${changedFiles.join(', ')}`);
+    log.info(TAG, `Changed files (${changedFiles.length}): ${changedFiles.join(', ')}`);
     // Connect to LanceDB
     const embedder = createEmbedder(config.embedding);
     const store = new LanceStore(path.join(cwd, config.lanceDir), embedder);
     await store.connect();
     // Retrieve context from LanceDB
     const query = buildSearchQuery(changedFiles, diff);
-    console.error(`[${TAG}] Querying Totem index...`);
+    log.info(TAG, 'Querying Totem index...');
     const context = await retrieveContext(query, store);
     const totalResults = context.specs.length + context.sessions.length + context.code.length;
-    console.error(`[${TAG}] Found: ${context.specs.length} specs, ${context.sessions.length} sessions, ${context.code.length} code chunks`);
+    log.info(TAG, `Found: ${context.specs.length} specs, ${context.sessions.length} sessions, ${context.code.length} code chunks`);
+    // Resolve system prompt (allow .totem/prompts/shield.md override)
+    const systemPrompt = getSystemPrompt('shield', SYSTEM_PROMPT, cwd, config.totemDir);
     // Assemble prompt
-    const prompt = assemblePrompt(diff, changedFiles, context);
-    console.error(`[${TAG}] Prompt: ${(prompt.length / 1024).toFixed(0)}KB`);
+    const prompt = assemblePrompt(diff, changedFiles, context, systemPrompt);
+    log.dim(TAG, `Prompt: ${(prompt.length / 1024).toFixed(0)}KB`);
     const content = runOrchestrator({ prompt, tag: TAG, options, config, cwd, totalResults });
     if (content != null) {
         writeOutput(content, options.out);
         if (options.out)
-            console.error(`[${TAG}] Written to ${options.out}`);
+            log.success(TAG, `Written to ${options.out}`);
         // Parse verdict and gate on failure (skip in --raw mode — no LLM output)
         if (!options.raw) {
             const verdict = parseVerdict(content);
             if (verdict) {
-                console.error(`[${TAG}] Verdict: ${verdict.pass ? 'PASS' : 'FAIL'}${verdict.reason ? ` — ${verdict.reason}` : ''}`);
+                const verdictLabel = verdict.pass ? successColor(bold('PASS')) : errorColor(bold('FAIL'));
+                const reason = verdict.reason ? ` — ${verdict.reason}` : '';
+                log.info(TAG, `Verdict: ${verdictLabel}${reason}`);
                 if (!verdict.pass)
                     process.exit(1);
             }
             else {
-                console.error(`[${TAG}] Verdict: not found (defaulting to FAIL — fix LLM output format)`);
+                log.error(TAG, 'Verdict: not found (defaulting to FAIL — fix LLM output format)');
                 process.exit(1);
             }
         }

package/dist/commands/shield.js.map

@@ -1 +1 @@
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package/dist/commands/spec.d.ts

@@ -4,5 +4,5 @@ export interface SpecOptions {
     model?: string;
     fresh?: boolean;
 }
-export declare function specCommand(input: string, options: SpecOptions): Promise<void>;
+export declare function specCommand(inputs: string[], options: SpecOptions): Promise<void>;
 //# sourceMappingURL=spec.d.ts.map

package/dist/commands/spec.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"spec.d.ts","sourceRoot":"","sources":["../../src/commands/spec.ts"],"names":[],"mappings":"AAoIA,MAAM,WAAW,WAAW;IAC1B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,GAAG,CAAC,EAAE,MAAM,CAAC;IACb,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAED,wBAAsB,WAAW,CAAC,KAAK,EAAE,MAAM,EAAE,OAAO,EAAE,WAAW,GAAG,OAAO,CAAC,IAAI,CAAC,CAiDpF"}
+{"version":3,"file":"spec.d.ts","sourceRoot":"","sources":["../../src/commands/spec.ts"],"names":[],"mappings":"AA8IA,MAAM,WAAW,WAAW;IAC1B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,GAAG,CAAC,EAAE,MAAM,CAAC;IACb,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAED,wBAAsB,WAAW,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,OAAO,EAAE,WAAW,GAAG,OAAO,CAAC,IAAI,CAAC,CAgEvF"}

package/dist/commands/spec.js

@@ -1,10 +1,12 @@
 import * as path from 'node:path';
 import { createEmbedder, LanceStore } from '@mmnto/totem';
 import { GitHubCliAdapter } from '../adapters/github-cli.js';
-import { formatResults, loadConfig, loadEnv, resolveConfigPath, runOrchestrator, wrapXml, writeOutput, } from '../utils.js';
+import { log } from '../ui.js';
+import { formatResults, getSystemPrompt, loadConfig, loadEnv, resolveConfigPath, runOrchestrator, wrapXml, writeOutput, } from '../utils.js';
 // ─── Constants ──────────────────────────────────────────
 const TAG = 'Spec';
 const QUERY_BODY_TRUNCATE = 500;
+const MAX_INPUTS = 5;
 // ─── System prompt ──────────────────────────────────────
 const SYSTEM_PROMPT = `# Spec System Prompt — Pre-Work Briefing
 
@@ -56,24 +58,24 @@ function buildSearchQuery(issue) {
     return `${issue.title} ${labels} ${bodySnippet}`.trim();
 }
 // ─── Prompt assembly ────────────────────────────────────
-function assemblePrompt(issue, freeText, context) {
-    const sections = [SYSTEM_PROMPT];
-    // Target issue or free-text topic
-    if (issue) {
-        const issueLabels = issue.labels.join(', ');
-        sections.push('=== TARGET ISSUE ===');
-        sections.push(`Issue #${issue.number}`);
-        sections.push(wrapXml('issue_title', issue.title));
-        sections.push(`Labels: ${issueLabels || '(none)'}`);
-        sections.push(`State: ${issue.state}`);
-        if (issue.body) {
-            sections.push('');
-            sections.push(wrapXml('issue_body', issue.body));
+function assemblePrompt(inputs, context, systemPrompt) {
+    const sections = [systemPrompt];
+    for (const { issue, freeText } of inputs) {
+        if (issue) {
+            const issueLabels = issue.labels.join(', ');
+            sections.push(`\n=== ISSUE #${issue.number}: ${issue.title} ===`);
+            sections.push(wrapXml('issue_title', issue.title));
+            sections.push(`Labels: ${issueLabels || '(none)'}`);
+            sections.push(`State: ${issue.state}`);
+            if (issue.body) {
+                sections.push('');
+                sections.push(wrapXml('issue_body', issue.body));
+            }
+        }
+        else if (freeText) {
+            sections.push('\n=== TOPIC ===');
+            sections.push(wrapXml('topic_text', freeText));
         }
-    }
-    else if (freeText) {
-        sections.push('=== TOPIC ===');
-        sections.push(freeText);
     }
     // Totem knowledge
     const specSection = formatResults(context.specs, 'RELATED SPECS & ADRs');
@@ -90,7 +92,11 @@ function assemblePrompt(issue, freeText, context) {
     }
     return sections.join('\n');
 }
-export async function specCommand(input, options) {
+export async function specCommand(inputs, options) {
+    const unique = [...new Set(inputs)];
+    if (unique.length > MAX_INPUTS) {
+        throw new Error(`[Totem Error] Too many inputs (${unique.length}). Maximum is ${MAX_INPUTS}.`);
+    }
     const cwd = process.cwd();
     const configPath = resolveConfigPath(cwd);
     loadEnv(cwd);
@@ -99,39 +105,46 @@ export async function specCommand(input, options) {
     const embedder = createEmbedder(config.embedding);
     const store = new LanceStore(path.join(cwd, config.lanceDir), embedder);
     await store.connect();
-    // Parse input: issue number, GitHub URL, or free-text
-    const urlMatch = input.match(/^https?:\/\/github\.com\/[^/]+\/[^/]+\/issues\/(\d+)/);
-    const issueNumber = /^\d+$/.test(input)
-        ? parseInt(input, 10)
-        : urlMatch
-            ? parseInt(urlMatch[1], 10)
-            : null;
-    let issue = null;
-    let query;
-    if (issueNumber) {
-        console.error(`[${TAG}] Fetching issue #${issueNumber}...`);
-        const adapter = new GitHubCliAdapter(cwd);
-        issue = adapter.fetchIssue(issueNumber);
-        console.error(`[${TAG}] Title: ${issue.title}`);
-        query = buildSearchQuery(issue);
-    }
-    else {
-        console.error(`[${TAG}] Topic: ${input}`);
-        query = input;
+    // Parse and fetch all inputs sequentially
+    const adapter = new GitHubCliAdapter(cwd);
+    const parsed = [];
+    const queryParts = [];
+    for (const input of unique) {
+        const urlMatch = input.match(/^https?:\/\/github\.com\/[^/]+\/[^/]+\/issues\/(\d+)/);
+        const issueNumber = /^\d+$/.test(input)
+            ? parseInt(input, 10)
+            : urlMatch
+                ? parseInt(urlMatch[1], 10)
+                : null;
+        if (issueNumber) {
+            log.info(TAG, `Fetching issue #${issueNumber}...`);
+            const issue = adapter.fetchIssue(issueNumber);
+            log.info(TAG, `Title: ${issue.title}`);
+            parsed.push({ issue, freeText: null });
+            queryParts.push(buildSearchQuery(issue));
+        }
+        else {
+            log.info(TAG, `Topic: ${input}`);
+            parsed.push({ issue: null, freeText: input });
+            queryParts.push(input);
+        }
     }
     // Retrieve context from LanceDB
-    console.error(`[${TAG}] Querying Totem index...`);
+    const query = queryParts.join(' ');
+    log.info(TAG, 'Querying Totem index...');
     const context = await retrieveContext(query, store);
     const totalResults = context.specs.length + context.sessions.length + context.code.length;
-    console.error(`[${TAG}] Found: ${context.specs.length} specs, ${context.sessions.length} sessions, ${context.code.length} code chunks`);
+    log.info(TAG, `Found: ${context.specs.length} specs, ${context.sessions.length} sessions, ${context.code.length} code chunks`);
+    // Resolve system prompt (allow .totem/prompts/spec.md override)
+    const systemPrompt = getSystemPrompt('spec', SYSTEM_PROMPT, cwd, config.totemDir);
     // Assemble prompt
-    const prompt = assemblePrompt(issue, issueNumber ? null : input, context);
-    console.error(`[${TAG}] Prompt: ${(prompt.length / 1024).toFixed(0)}KB`);
+    const prompt = assemblePrompt(parsed, context, systemPrompt);
+    log.dim(TAG, `Prompt: ${(prompt.length / 1024).toFixed(0)}KB`);
     const content = runOrchestrator({ prompt, tag: TAG, options, config, cwd, totalResults });
     if (content != null) {
         writeOutput(content, options.out);
         if (options.out)
-            console.error(`[${TAG}] Written to ${options.out}`);
+            log.success(TAG, `Written to ${options.out}`);
     }
 }
 //# sourceMappingURL=spec.js.map

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package/dist/commands/sync.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"sync.d.ts","sourceRoot":"","sources":["../../src/commands/sync.ts"],"names":[],"mappings":"AAIA,wBAAsB,WAAW,CAAC,OAAO,EAAE;IAAE,IAAI,CAAC,EAAE,OAAO,CAAA;CAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CAgB5E"}
+{"version":3,"file":"sync.d.ts","sourceRoot":"","sources":["../../src/commands/sync.ts"],"names":[],"mappings":"AAOA,wBAAsB,WAAW,CAAC,OAAO,EAAE;IAAE,IAAI,CAAC,EAAE,OAAO,CAAA;CAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CA0B5E"}

package/dist/commands/sync.js

@@ -1,16 +1,25 @@
 import { runSync } from '@mmnto/totem';
+import { createSpinner } from '../ui.js';
 import { loadConfig, loadEnv, resolveConfigPath } from '../utils.js';
+const TAG = 'Sync';
 export async function syncCommand(options) {
     const cwd = process.cwd();
     const configPath = resolveConfigPath(cwd);
     loadEnv(cwd);
     const config = await loadConfig(configPath);
     const incremental = !options.full;
-    const result = await runSync(config, {
-        projectRoot: cwd,
-        incremental,
-        onProgress: (msg) => console.log(`[Totem] ${msg}`),
-    });
-    console.log(`[Totem] Done: ${result.chunksProcessed} chunks from ${result.filesProcessed} files`);
+    const spinner = await createSpinner(TAG, incremental ? 'Incremental sync...' : 'Full re-index...');
+    try {
+        const result = await runSync(config, {
+            projectRoot: cwd,
+            incremental,
+            onProgress: (msg) => spinner.update(msg),
+        });
+        spinner.succeed(`Done: ${result.chunksProcessed} chunks from ${result.filesProcessed} files`);
+    }
+    catch (err) {
+        spinner.fail('Sync failed');
+        throw err;
+    }
 }
 //# sourceMappingURL=sync.js.map

package/dist/commands/sync.js.map

@@ -1 +1 @@
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+{"version":3,"file":"sync.js","sourceRoot":"","sources":["../../src/commands/sync.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,cAAc,CAAC;AAEvC,OAAO,EAAE,aAAa,EAAE,MAAM,UAAU,CAAC;AACzC,OAAO,EAAE,UAAU,EAAE,OAAO,EAAE,iBAAiB,EAAE,MAAM,aAAa,CAAC;AAErE,MAAM,GAAG,GAAG,MAAM,CAAC;AAEnB,MAAM,CAAC,KAAK,UAAU,WAAW,CAAC,OAA2B;IAC3D,MAAM,GAAG,GAAG,OAAO,CAAC,GAAG,EAAE,CAAC;IAC1B,MAAM,UAAU,GAAG,iBAAiB,CAAC,GAAG,CAAC,CAAC;IAE1C,OAAO,CAAC,GAAG,CAAC,CAAC;IAEb,MAAM,MAAM,GAAG,MAAM,UAAU,CAAC,UAAU,CAAC,CAAC;IAC5C,MAAM,WAAW,GAAG,CAAC,OAAO,CAAC,IAAI,CAAC;IAElC,MAAM,OAAO,GAAG,MAAM,aAAa,CACjC,GAAG,EACH,WAAW,CAAC,CAAC,CAAC,qBAAqB,CAAC,CAAC,CAAC,kBAAkB,CACzD,CAAC;IAEF,IAAI,CAAC;QACH,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,MAAM,EAAE;YACnC,WAAW,EAAE,GAAG;YAChB,WAAW;YACX,UAAU,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,OAAO,CAAC,MAAM,CAAC,GAAG,CAAC;SACzC,CAAC,CAAC;QAEH,OAAO,CAAC,OAAO,CAAC,SAAS,MAAM,CAAC,eAAe,gBAAgB,MAAM,CAAC,cAAc,QAAQ,CAAC,CAAC;IAChG,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,OAAO,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QAC5B,MAAM,GAAG,CAAC;IACZ,CAAC;AACH,CAAC"}

package/dist/commands/triage.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"triage.d.ts","sourceRoot":"","sources":["../../src/commands/triage.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,qBAAqB,EAAE,MAAM,8BAA8B,CAAC;AAkF1E,wBAAgB,oBAAoB,CAAC,MAAM,EAAE,qBAAqB,EAAE,GAAG,MAAM,CAQ5E;AA6BD,MAAM,WAAW,aAAa;IAC5B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,GAAG,CAAC,EAAE,MAAM,CAAC;IACb,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAED,wBAAsB,aAAa,CAAC,OAAO,EAAE,aAAa,GAAG,OAAO,CAAC,IAAI,CAAC,CA0CzE"}

package/dist/commands/triage.js

@@ -1,7 +1,8 @@
 import * as path from 'node:path';
 import { createEmbedder, LanceStore } from '@mmnto/totem';
 import { GitHubCliAdapter } from '../adapters/github-cli.js';
-import { formatResults, loadConfig, loadEnv, resolveConfigPath, runOrchestrator, wrapXml, writeOutput, } from '../utils.js';
+import { log } from '../ui.js';
+import { formatResults, getSystemPrompt, loadConfig, loadEnv, resolveConfigPath, runOrchestrator, wrapXml, writeOutput, } from '../utils.js';
 // ─── Constants ──────────────────────────────────────────
 const TAG = 'Triage';
 const MAX_SPEC_RESULTS = 5;
@@ -60,8 +61,8 @@ export function formatIssueInventory(issues) {
     });
     return ['| Issue | Title | Labels | Updated |', '|---|---|---|---|', ...rows].join('\n');
 }
-function assemblePrompt(issues, context) {
-    const sections = [SYSTEM_PROMPT];
+function assemblePrompt(issues, context, systemPrompt) {
+    const sections = [systemPrompt];
     // Issue inventory
     sections.push('=== OPEN ISSUES ===');
     sections.push(`Total: ${issues.length} open issues\n`);
@@ -84,32 +85,34 @@ export async function triageCommand(options) {
     loadEnv(cwd);
     const config = await loadConfig(configPath);
     // Fetch open issues
-    console.error(`[${TAG}] Fetching open issues...`);
+    log.info(TAG, 'Fetching open issues...');
     const adapter = new GitHubCliAdapter(cwd);
     const issues = adapter.fetchOpenIssues(GH_ISSUE_LIMIT);
     if (issues.length === 0) {
-        console.error(`[${TAG}] No open issues found. Nothing to triage.`);
+        log.warn(TAG, 'No open issues found. Nothing to triage.');
         return;
     }
-    console.error(`[${TAG}] Found ${issues.length} open issues.`);
+    log.info(TAG, `Found ${issues.length} open issues.`);
     // Connect to LanceDB
     const embedder = createEmbedder(config.embedding);
     const store = new LanceStore(path.join(cwd, config.lanceDir), embedder);
     await store.connect();
     // Retrieve context from LanceDB
     const query = buildSearchQuery(issues);
-    console.error(`[${TAG}] Querying Totem index...`);
+    log.info(TAG, 'Querying Totem index...');
     const context = await retrieveContext(query, store);
     const totalResults = context.specs.length + context.sessions.length;
-    console.error(`[${TAG}] Found: ${context.specs.length} specs, ${context.sessions.length} sessions`);
+    log.info(TAG, `Found: ${context.specs.length} specs, ${context.sessions.length} sessions`);
+    // Resolve system prompt (allow .totem/prompts/triage.md override)
+    const systemPrompt = getSystemPrompt('triage', SYSTEM_PROMPT, cwd, config.totemDir);
     // Assemble prompt
-    const prompt = assemblePrompt(issues, context);
-    console.error(`[${TAG}] Prompt: ${(prompt.length / 1024).toFixed(0)}KB`);
+    const prompt = assemblePrompt(issues, context, systemPrompt);
+    log.dim(TAG, `Prompt: ${(prompt.length / 1024).toFixed(0)}KB`);
     const content = runOrchestrator({ prompt, tag: TAG, options, config, cwd, totalResults });
     if (content != null) {
         writeOutput(content, options.out);
         if (options.out)
-            console.error(`[${TAG}] Written to ${options.out}`);
+            log.success(TAG, `Written to ${options.out}`);
     }
 }
 //# sourceMappingURL=triage.js.map

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