@mka-rainmaker/ama 0.3.0 → 0.3.1

package/README.md

@@ -3,7 +3,7 @@
 <p align="center">
   <a href="https://www.npmjs.com/package/@mka-rainmaker/ama"><img alt="npm" src="https://img.shields.io/npm/v/@mka-rainmaker/ama?label=npm&color=007ec6"></a>
   <a href="LICENSE"><img alt="License: MIT" src="https://img.shields.io/badge/License-MIT-e0a100"></a>
-  <img alt="Node.js 24+" src="https://img.shields.io/badge/Node.js-24%2B-44883e">
+  <img alt="Node.js 24+ or bundled" src="https://img.shields.io/badge/Node.js-24%2B%20or%20bundled-44883e">
 </p>
 <p align="center">
   <img alt="macOS supported" src="https://img.shields.io/badge/macOS-supported-4c8eda">
@@ -22,20 +22,30 @@
 
 Named after a puppy: small, eager, and a little smarter every day.
 
-> Status: **0.2** — deep TypeScript analysis; a baseline call graph for Python (incl. FastAPI route→handler→test impact); framework-route detection across TypeScript, Python, Go, PHP, Java, and Rust; syntactic breadth for 13 more languages; an embeddable library API; 27 MCP tools; an `ama` CLI; and persistent, auto-syncing incremental indexing — all able to index Ama's own source cleanly as the built-in regression test.
+> Status: **0.3** — deep TypeScript analysis; a baseline call graph for Python (incl. FastAPI route→handler→test impact); framework-route detection across TypeScript, Python, Go, PHP, Java, and Rust; syntactic breadth for 13 more languages; an embeddable library API; 27 MCP tools; an `ama` CLI (with self-update via `ama upgrade`); persistent, auto-syncing incremental indexing; and **self-contained, no-Node install bundles** for macOS/Linux/Windows — all able to index Ama's own source cleanly as the built-in regression test.
 
-## Get started
+**1. Install Ama** — a self-contained bundle (no Node needed) or via npm (Node 24+):
 
-> Requires **Node.js 24+**.
+```bash
+# macOS / Linux — self-contained, no Node required
+curl -fsSL https://raw.githubusercontent.com/mka-rainmaker/ama/main/install.sh | sh
+
+# Windows (PowerShell)
+irm https://raw.githubusercontent.com/mka-rainmaker/ama/main/install.ps1 | iex
+
+# …or, if you already have Node 24+
+npm install -g @mka-rainmaker/ama
+```
+
+**2. Wire it into your agent:**
 
 ```bash
-npm install -g @mka-rainmaker/ama   # 1. install
-ama install                          # 2. wire it into your agent (Claude Code / Cursor / Windsurf / Codex)
+ama install   # auto-configures Claude Code / Cursor / Windsurf / Codex
 ```
 
-3. Point your agent at a repo and ask structural questions — *"who calls `createServer`?"*, *"what breaks if I change `AmaSession`?"* Your agent runs `index_repository` once, then queries the graph; Ama re-indexes automatically as you edit.
+**3. Ask your agent structural questions** — *"who calls `createServer`?"*, *"what breaks if I change `AmaSession`?"* It runs `index_repository` once, then queries the graph; Ama re-indexes automatically as you edit.
 
-No global install? Use `npx -y @mka-rainmaker/ama mcp` as the command — see [Configure your coding agent](#configure-your-coding-agent).
+(No install at all? `npx -y @mka-rainmaker/ama mcp` works as the MCP command — see [Configure your coding agent](#configure-your-coding-agent).)
 
 ## Why Ama
 
@@ -141,6 +151,7 @@ The same package ships an `ama` CLI mirroring the query surface, for one-shot us
 ```bash
 ama --help     # list commands
 ama mcp        # run the MCP server over stdio (what coding agents spawn)
+ama upgrade    # update Ama in place (npm or bundle); --check to see the latest release
 ```
 
 ## Programmatic API
@@ -188,7 +199,7 @@ npm test            # run the test suite (vitest)
 npm run typecheck   # type-check without emitting
 ```
 
-The backlog is tracked with [beads](https://github.com/steveyegge/beads) (`bd ready` to see what's actionable).
+Issues and the backlog live in [GitHub Issues](https://github.com/mka-rainmaker/ama/issues); see [`CONTRIBUTING.md`](CONTRIBUTING.md) for the workflow.
 
 ## License
 

package/dist/analyzers/baseline/java.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"java.d.ts","sourceRoot":"","sources":["../../../src/analyzers/baseline/java.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAmOlD;;;;;GAKG;AACH,eAAO,MAAM,QAAQ,EAAE,YAatB,CAAC"}

package/dist/analyzers/baseline/java.js

@@ -1,4 +1,4 @@
-import { symbolId } from "../../graph/index.js";
+import { CALL_REF_PREFIX, symbolId } from "../../graph/index.js";
 import { ancestorDirs } from "./paths.js";
 /** Try a repo-relative file under every ancestor directory of the importer. A
  *  package import gives a *source-root-relative* path (`com/example/Foo.java`)
@@ -112,6 +112,114 @@ function javaRoutes(root, rel) {
     }
     return { nodes, edges };
 }
+/** Symbol-typed Java CST nodes — the ones walkSymbols turns into graph nodes — so a method's
+ *  qualified name is the dotted chain of these ancestors' names (e.g. `Sample.square`). */
+const JAVA_SYMBOL_TYPES = new Set([
+    "class_declaration",
+    "interface_declaration",
+    "enum_declaration",
+    "method_declaration",
+]);
+/** Reproduce walkSymbols' dotted qualified name for `node`: the `name` of each symbol-typed
+ *  ancestor, outermost first. Undefined if a link is anonymous (can't qualify) — it must match the
+ *  id of the Method node walkSymbols already emitted, so call edges resolve to it. */
+function javaQualifiedName(node) {
+    const parts = [];
+    for (let n = node; n; n = n.parent) {
+        if (!JAVA_SYMBOL_TYPES.has(n.type))
+            continue;
+        const name = n.childForFieldName("name")?.text;
+        if (!name)
+            return undefined;
+        parts.unshift(name);
+    }
+    return parts.length ? parts.join(".") : undefined;
+}
+/** Every descendant (and self) of a given CST type. */
+function* eachOfType(node, type) {
+    if (node.type === type)
+        yield node;
+    for (const c of node.namedChildren)
+        yield* eachOfType(c, type);
+}
+/** The nearest enclosing method_declaration — the symbol a call site belongs to. */
+function enclosingMethod(node) {
+    for (let n = node.parent; n; n = n.parent) {
+        if (n.type === "method_declaration")
+            return n;
+    }
+    return undefined;
+}
+/** Method names ubiquitous on java.lang.Object / common stdlib types — a baseline call to one of
+ *  these (`obj.toString()`, `System.out.println(...)`) almost never targets a user method in an
+ *  imported file, so a `call:` candidate for it is pure noise (it cannot resolve, or resolves wrong
+ *  by name). Conservative on purpose — only names you would never define-and-call cross-file. (#38) */
+const JAVA_BUILTINS = new Set([
+    "toString",
+    "equals",
+    "hashCode",
+    "getClass",
+    "clone",
+    "finalize",
+    "notify",
+    "notifyAll",
+    "wait",
+    "println",
+    "print",
+]);
+/** Heuristic baseline call edges for Java. A `method_invocation` whose name matches a method defined
+ *  in the SAME file resolves by name to a `Calls` edge from the enclosing method (within-file); a
+ *  non-local name becomes a `call:<name>` candidate that {@link deriveCallEdges} resolves cross-file
+ *  via the import graph — so find_callers/find_callees span Java classes and files instead of the
+ *  empty `callsTotal: 0` the baseline tier used to give. A name defined more than once locally is
+ *  ambiguous (skipped); a call outside any method is skipped. (#34) */
+function javaCalls(root, rel) {
+    const byName = new Map(); // simple name → id, or null when ambiguous
+    for (const m of eachOfType(root, "method_declaration")) {
+        const qn = javaQualifiedName(m);
+        const simple = m.childForFieldName("name")?.text;
+        if (!qn || !simple)
+            continue;
+        byName.set(simple, byName.has(simple) ? null : symbolId({ file: rel, qualifiedName: qn }));
+    }
+    const edges = [];
+    const seen = new Set();
+    for (const call of eachOfType(root, "method_invocation")) {
+        const enc = enclosingMethod(call);
+        const name = call.childForFieldName("name")?.text;
+        if (!enc || !name)
+            continue;
+        const local = byName.get(name);
+        if (local === null)
+            continue; // a name defined more than once locally — don't guess
+        const callerQn = javaQualifiedName(enc);
+        if (!callerQn)
+            continue;
+        const from = symbolId({ file: rel, qualifiedName: callerQn });
+        if (local) {
+            // resolved within this file (slice 1)
+            const key = `c ${from} ${local}`;
+            if (from === local || seen.has(key))
+                continue; // skip self-recursion + duplicate sites
+            seen.add(key);
+            edges.push({ from, to: local, kind: "Calls", provenance: "heuristic" });
+        }
+        else if (!JAVA_BUILTINS.has(name)) {
+            // not local — a cross-file candidate deriveCallEdges resolves via the import graph (slice 2)
+            const key = `r ${from} ${name}`;
+            if (seen.has(key))
+                continue;
+            seen.add(key);
+            edges.push({
+                from,
+                to: `${CALL_REF_PREFIX}${name}`,
+                kind: "References",
+                provenance: "call-ref",
+            });
+        }
+    }
+    return { nodes: [], edges };
+}
 /**
  * Baseline (syntactic) spec for Java. Java gives every kind its own CST node
  * type — class/interface/enum declarations and methods — so each maps directly
@@ -130,5 +238,6 @@ export const javaSpec = {
     },
     resolveImports: javaImports,
     collectRoutes: javaRoutes,
+    collectCalls: javaCalls,
 };
 //# sourceMappingURL=java.js.map

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package/dist/graph/python-calls.d.ts

@@ -4,7 +4,7 @@ import type { GraphEdge, GraphNode } from "./types.js";
 export declare const CALL_REF_PREFIX = "call:";
 /**
  * Resolve `call:<name>` candidates (provenance `call-ref`, emitted by the baseline call detector
- * for calls it can't resolve within the file) into `Calls` edges, by finding a function named
+ * for calls it can't resolve within the file) into `Calls` edges, by finding a function or method named
  * `<name>` in a file the caller's file imports. Import-guided + name-based — precise enough for a
  * syntactic tier; a name in no imported file is dropped. Pure + whole-graph: the candidate and the
  * imported file's symbols only meet after every file is indexed, so (like the dispatch/prisma

package/dist/graph/python-calls.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"python-calls.d.ts","sourceRoot":"","sources":["../../src/graph/python-calls.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAEvD;mGACmG;AACnG,eAAO,MAAM,eAAe,UAAU,CAAC;AAEvC;;;;;;;GAOG;AACH,wBAAgB,eAAe,CAAC,KAAK,EAAE,SAAS,EAAE,EAAE,KAAK,EAAE,SAAS,EAAE,GAAG,SAAS,EAAE,CAmDnF"}

package/dist/graph/python-calls.js.map

@@ -1 +1 @@
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package/dist/indexer/indexer.d.ts.map

@@ -1 +1 @@
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package/dist/indexer/indexer.js

@@ -93,9 +93,7 @@ export class Indexer {
         if (skippedLarge.length > 0) {
             // Honest about omissions, like the per-analyzer isolation below: a file too big
             // to parse safely is left out, but said so on stderr (stdout is JSON-RPC only).
-            console.error(`[ama] skipped ${skippedLarge.length} file(s) over the ` +
-                `${MAX_FILE_SIZE_BYTES / 1024 / 1024} MB parse cap (too large to index): ` +
-                skippedLarge.join(", "));
+            console.error(`[ama] skipped ${skippedLarge.length} file(s) over the ${MAX_FILE_SIZE_BYTES / 1024 / 1024} MB parse cap (too large to index): ${skippedLarge.join(", ")}`);
         }
         const store = this.createStore(root);
         store.clear(); // a persistent store may hold a previous index; rebuild clean

package/dist/indexer/indexer.js.map

@@ -1 +1 @@
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package/dist/mcp/server.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../../src/mcp/server.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AASpE,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAyB1C;;;gFAGgF;AAChF,wBAAgB,MAAM,CAAC,CAAC,EACtB,OAAO,EAAE,CAAC,EAAE,EACZ,KAAK,EAAE,MAAM,EACb,QAAQ,CAAC,EAAE,MAAM,GAChB;IAAE,KAAK,EAAE,CAAC,EAAE,CAAC;IAAC,IAAI,CAAC,EAAE,MAAM,CAAA;CAAE,CAQ/B;AAkCD;6DAC6D;AAC7D,wBAAgB,UAAU,CAAC,MAAM,EAAE,OAAO,GAAG,MAAM,CAmClD;AAuBD;;;;GAIG;AACH,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,GAAG,GAAG,CAAC,MAAM,CAAC,GAAG,IAAI,CASxE;AAED;;;;GAIG;AACH,wBAAgB,YAAY,CAC1B,OAAO,GAAE,UAA6B,EACtC,SAAS,GAAE,MAAM,GAAG,SAAqC,GACxD,SAAS,CAmkBX;AAED,mFAAmF;AACnF,wBAAsB,IAAI,IAAI,OAAO,CAAC,IAAI,CAAC,CAI1C"}
+{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../../src/mcp/server.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AASpE,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAyB1C;;;gFAGgF;AAChF,wBAAgB,MAAM,CAAC,CAAC,EACtB,OAAO,EAAE,CAAC,EAAE,EACZ,KAAK,EAAE,MAAM,EACb,QAAQ,CAAC,EAAE,MAAM,GAChB;IAAE,KAAK,EAAE,CAAC,EAAE,CAAC;IAAC,IAAI,CAAC,EAAE,MAAM,CAAA;CAAE,CAQ/B;AAmCD;6DAC6D;AAC7D,wBAAgB,UAAU,CAAC,MAAM,EAAE,OAAO,GAAG,MAAM,CAmClD;AAuBD;;;;GAIG;AACH,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,GAAG,GAAG,CAAC,MAAM,CAAC,GAAG,IAAI,CASxE;AAED;;;;GAIG;AACH,wBAAgB,YAAY,CAC1B,OAAO,GAAE,UAA6B,EACtC,SAAS,GAAE,MAAM,GAAG,SAAqC,GACxD,SAAS,CAmkBX;AAED,mFAAmF;AACnF,wBAAsB,IAAI,IAAI,OAAO,CAAC,IAAI,CAAC,CAO1C"}

package/dist/mcp/server.js

@@ -58,6 +58,7 @@ const projectPathSchema = z
  */
 function queryTool(session, run) {
     return async (args) => {
+        await session.ensureIndexed();
         await session.catchUpIfNeeded();
         return reply(session, run(args));
     };
@@ -420,7 +421,10 @@ export function createServer(session = new AmaSession(), toolsSpec = process.env
 }
 /** Entry point: serve over stdio. stdout carries JSON-RPC only — log to stderr. */
 export async function main() {
-    const server = createServer();
+    // Lazily index the launch directory (or AMA_ROOT) on the first query, so an agent that
+    // queries before calling index_repository gets a transparent first index, not an error. (#35)
+    const session = new AmaSession(undefined, process.env.AMA_ROOT ?? process.cwd());
+    const server = createServer(session);
     await server.connect(new StdioServerTransport());
     console.error("ama MCP server running on stdio");
 }

package/dist/mcp/server.js.map

@@ -1 +1 @@
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package/dist/mcp/session.d.ts

@@ -39,6 +39,10 @@ export type IndexStatus = {
  */
 export declare class AmaSession {
     private readonly indexer;
+    /** Repo to lazily index the first time a query is served with nothing indexed yet
+     *  (see {@link ensureIndexed}). The MCP server sets it to AMA_ROOT/cwd; the CLI and
+     *  library leave it unset, keeping the explicit-index contract. (#35) */
+    private readonly defaultRoot?;
     /** All indexed projects, keyed by resolved root. The watcher/auto-sync and the
      *  `store`/`query`/`stats` fields track the *primary* (last-indexed) project; other
      *  projects are queryable snapshots reached via a `projectPath`. (ama-ont) */
@@ -49,7 +53,12 @@ export declare class AmaSession {
     private watcher?;
     private debouncer?;
     private needsCatchUp;
-    constructor(indexer?: Indexer);
+    private triedDefaultIndex;
+    constructor(indexer?: Indexer, 
+    /** Repo to lazily index the first time a query is served with nothing indexed yet
+     *  (see {@link ensureIndexed}). The MCP server sets it to AMA_ROOT/cwd; the CLI and
+     *  library leave it unset, keeping the explicit-index contract. (#35) */
+    defaultRoot?: string | undefined);
     indexRepository(root: string): Promise<IndexStats>;
     /** Add (or replace) a project in the registry and make it the primary. Re-indexing
      *  the same root closes its old store; a different root is kept alongside, so several
@@ -77,6 +86,14 @@ export declare class AmaSession {
      * after a reconnect sees a current graph.
      */
     catchUpIfNeeded(): Promise<SyncResult | undefined>;
+    /**
+     * Lazily index {@link defaultRoot} the first time a query is served with nothing
+     * indexed yet — so an agent that queries before calling `index_repository` gets a
+     * transparent first index instead of a "Nothing indexed yet" error. Tried at most
+     * once; a no-op when something is already indexed or no default root is configured
+     * (the CLI/library set none and keep the explicit-index contract). (#35)
+     */
+    ensureIndexed(): Promise<void>;
     /**
      * Re-index a single file that changed on disk, updating the live graph in
      * place (no full rebuild, same store, so existing queries keep working).

package/dist/mcp/session.d.ts.map

@@ -1 +1 @@
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package/dist/mcp/session.js

@@ -14,6 +14,7 @@ const DEFAULT_DEBOUNCE_MS = 200;
  */
 export class AmaSession {
     indexer;
+    defaultRoot;
     /** All indexed projects, keyed by resolved root. The watcher/auto-sync and the
      *  `store`/`query`/`stats` fields track the *primary* (last-indexed) project; other
      *  projects are queryable snapshots reached via a `projectPath`. (ama-ont) */
@@ -24,8 +25,14 @@ export class AmaSession {
     watcher;
     debouncer;
     needsCatchUp = false;
-    constructor(indexer = createDefaultIndexer()) {
+    triedDefaultIndex = false;
+    constructor(indexer = createDefaultIndexer(), 
+    /** Repo to lazily index the first time a query is served with nothing indexed yet
+     *  (see {@link ensureIndexed}). The MCP server sets it to AMA_ROOT/cwd; the CLI and
+     *  library leave it unset, keeping the explicit-index contract. (#35) */
+    defaultRoot) {
         this.indexer = indexer;
+        this.defaultRoot = defaultRoot;
     }
     async indexRepository(root) {
         const abs = path.resolve(root);
@@ -94,6 +101,19 @@ export class AmaSession {
         this.needsCatchUp = false;
         return this.sync();
     }
+    /**
+     * Lazily index {@link defaultRoot} the first time a query is served with nothing
+     * indexed yet — so an agent that queries before calling `index_repository` gets a
+     * transparent first index instead of a "Nothing indexed yet" error. Tried at most
+     * once; a no-op when something is already indexed or no default root is configured
+     * (the CLI/library set none and keep the explicit-index contract). (#35)
+     */
+    async ensureIndexed() {
+        if (this.query || !this.defaultRoot || this.triedDefaultIndex)
+            return;
+        this.triedDefaultIndex = true;
+        await this.indexRepository(this.defaultRoot);
+    }
     /**
      * Re-index a single file that changed on disk, updating the live graph in
      * place (no full rebuild, same store, so existing queries keep working).

package/dist/mcp/session.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@mka-rainmaker/ama",
-  "version": "0.3.0",
+  "version": "0.3.1",
   "description": "Local-first code-intelligence MCP server with deep, language-specific semantic parsing.",
   "type": "module",
   "license": "MIT",
@@ -35,11 +35,7 @@
     "ai-agents",
     "developer-tools"
   ],
-  "files": [
-    "dist",
-    "README.md",
-    "LICENSE"
-  ],
+  "files": ["dist", "README.md", "LICENSE"],
   "publishConfig": {
     "access": "public"
   },