@mison/ling 1.1.0 → 1.2.0

package/bin/ling-cli.js

@@ -5,7 +5,7 @@ const os = require("os");
 const path = require("path");
 
 const pkg = require("../package.json");
-const { readGlobalNpmDependencies, cloneBranchAgentDir } = require("./utils");
+const { readGlobalNpmDependencies, cloneBranchAgentDir, cloneBranchSpecDir } = require("./utils");
 const ManifestManager = require("./utils/manifest");
 const AtomicWriter = require("./utils/atomic-writer");
 const CodexBuilder = require("./core/builder");
@@ -19,7 +19,8 @@ const PRIMARY_CLI_NAME = "ling";
 const WORKSPACE_INDEX_VERSION = 2;
 const UPSTREAM_GLOBAL_PACKAGE = "@vudovn/ag-kit";
 const TOOLKIT_PACKAGE_NAMES = new Set(["@mison/ling", "@mison/ag-kit-cn", "antigravity-kit-cn", "antigravity-kit"]);
-const SUPPORTED_TARGETS = ["gemini", "codex"];
+const SUPPORTED_TARGETS = ["gemini", "antigravity", "codex"];
+const SHARED_AGENT_TARGETS = ["gemini", "antigravity"];
 const LEGACY_INDEX_TARGET_ALIASES = {
     full: "gemini",
 };
@@ -37,6 +38,8 @@ const GLOBAL_TARGET_DESTINATIONS = {
             rootParts: [".gemini", "skills"],
             skillsParts: [".gemini", "skills"],
         },
+    ],
+    antigravity: [
         {
             id: "antigravity",
             rootParts: [".gemini", "antigravity"],
@@ -55,6 +58,9 @@ const QUIET_STATUS_EXIT_CODES = {
 const SPEC_STATE_VERSION = 1;
 const SPEC_SKILL_NAMES = ["harness-engineering", "cybernetic-systems-engineering"];
 const VERSION_TAG_PREFIX = "ling-";
+const SPEC_TEMPLATE_REQUIRED_FILES = ["issues.template.csv", "driver-prompt.md", "review-report.md", "phase-acceptance.md", "handoff.md"];
+const SPEC_REFERENCE_REQUIRED_FILES = ["README.md", "harness-engineering-digest.md", "gda-framework.md", "cse-quickstart.md"];
+const SPEC_PROFILE_REQUIRED_FILES = ["codex/AGENTS.spec.md", "codex/ling.spec.rules.md", "gemini/GEMINI.spec.md"];
 
 function nowISO() {
     return new Date().toISOString();
@@ -167,11 +173,13 @@ function printUsage() {
     console.log(`  ${PRIMARY_CLI_NAME} update [--path <dir>] [--branch <name>] [--target <name>|--targets <a,b>] [--no-index] [--quiet] [--dry-run]`);
     console.log(`  ${PRIMARY_CLI_NAME} update-all [--branch <name>] [--targets <a,b>] [--prune-missing] [--quiet] [--dry-run]`);
     console.log(`  ${PRIMARY_CLI_NAME} doctor [--path <dir>] [--target <name>|--targets <a,b>] [--fix] [--quiet]`);
-    console.log(`  ${PRIMARY_CLI_NAME} global sync [--target <name>|--targets <a,b>] [--branch <name>] [--quiet] [--dry-run]  # 默认同步 codex + gemini(cli+antigravity)`);
+    console.log(`  ${PRIMARY_CLI_NAME} global sync [--target <name>|--targets <a,b>] [--branch <name>] [--quiet] [--dry-run]  # 默认同步 codex + gemini + antigravity`);
     console.log(`  ${PRIMARY_CLI_NAME} global status [--quiet]`);
     console.log(`  ${PRIMARY_CLI_NAME} spec enable [--target <name>|--targets <a,b>] [--quiet] [--dry-run]`);
     console.log(`  ${PRIMARY_CLI_NAME} spec disable [--target <name>|--targets <a,b>] [--quiet] [--dry-run]`);
     console.log(`  ${PRIMARY_CLI_NAME} spec status [--quiet]`);
+    console.log(`  ${PRIMARY_CLI_NAME} spec init [--path <dir>] [--spec-workspace] [--csv-only] [--target <name>|--targets <a,b>] [--branch <name>] [--force] [--non-interactive] [--no-index] [--quiet] [--dry-run]`);
+    console.log(`  ${PRIMARY_CLI_NAME} spec doctor [--path <dir>] [--spec-workspace] [--quiet]`);
     console.log(`  ${PRIMARY_CLI_NAME} exclude list [--quiet]`);
     console.log(`  ${PRIMARY_CLI_NAME} exclude add --path <dir> [--dry-run] [--quiet]`);
     console.log(`  ${PRIMARY_CLI_NAME} exclude remove --path <dir> [--dry-run] [--quiet]`);
@@ -197,6 +205,8 @@ function parseArgs(argv) {
         nonInteractive: false,
         noIndex: false,
         fix: false,
+        csvOnly: false,
+        specWorkspace: false,
         subcommand: "",
         path: "",
         branch: "",
@@ -247,6 +257,12 @@ function parseArgs(argv) {
         } else if (arg === "--fix") {
             providedFlags.push(arg);
             options.fix = true;
+        } else if (arg === "--csv-only") {
+            providedFlags.push(arg);
+            options.csvOnly = true;
+        } else if (arg === "--spec-workspace") {
+            providedFlags.push(arg);
+            options.specWorkspace = true;
         } else if (arg === "--path") {
             providedFlags.push(arg);
             if (i + 1 >= argv.length) {
@@ -290,6 +306,8 @@ const COMMAND_ALLOWED_FLAGS = {
     "spec:enable": ["--target", "--targets", "--quiet", "--dry-run"],
     "spec:disable": ["--target", "--targets", "--quiet", "--dry-run"],
     "spec:status": ["--quiet"],
+    "spec:init": ["--force", "--path", "--spec-workspace", "--branch", "--csv-only", "--target", "--targets", "--non-interactive", "--no-index", "--quiet", "--dry-run"],
+    "spec:doctor": ["--path", "--spec-workspace", "--quiet"],
     "exclude:list": ["--quiet"],
     "exclude:add": ["--path", "--dry-run", "--quiet"],
     "exclude:remove": ["--path", "--dry-run", "--quiet"],
@@ -382,6 +400,12 @@ function pathCompareKey(inputPath) {
     return normalized;
 }
 
+function findWorkspaceRecord(index, workspaceRoot) {
+    const normalizedPath = normalizeAbsolutePath(workspaceRoot);
+    const targetKey = pathCompareKey(normalizedPath);
+    return (index.workspaces || []).find((item) => pathCompareKey(item.path) === targetKey) || null;
+}
+
 function normalizePathList(items) {
     const map = new Map();
     for (const item of items) {
@@ -620,6 +644,95 @@ function writeWorkspaceIndex(indexPath, index) {
     fs.writeFileSync(indexPath, `${JSON.stringify(payload, null, 2)}\n`, "utf8");
 }
 
+function getWorkspaceInstallStatePath(workspaceRoot) {
+    return path.join(normalizeAbsolutePath(workspaceRoot), ".ling", "install-state.json");
+}
+
+function createEmptyWorkspaceInstallState() {
+    return {
+        version: 1,
+        updatedAt: "",
+        targets: {},
+    };
+}
+
+function readWorkspaceInstallState(workspaceRoot) {
+    const statePath = getWorkspaceInstallStatePath(workspaceRoot);
+    if (!fs.existsSync(statePath)) {
+        return { statePath, state: createEmptyWorkspaceInstallState() };
+    }
+
+    const raw = fs.readFileSync(statePath, "utf8").trim();
+    if (!raw) {
+        return { statePath, state: createEmptyWorkspaceInstallState() };
+    }
+
+    let parsed;
+    try {
+        parsed = JSON.parse(raw);
+    } catch (_err) {
+        return { statePath, state: createEmptyWorkspaceInstallState() };
+    }
+
+    const state = createEmptyWorkspaceInstallState();
+    state.updatedAt = typeof parsed.updatedAt === "string" ? parsed.updatedAt : "";
+    if (parsed && parsed.targets && typeof parsed.targets === "object") {
+        for (const [targetName, targetState] of Object.entries(parsed.targets)) {
+            const normalizedTargetName = normalizeIndexTargetName(targetName);
+            const normalizedTargetState = normalizeTargetState(targetState);
+            if (normalizedTargetName && normalizedTargetState) {
+                state.targets[normalizedTargetName] = normalizedTargetState;
+            }
+        }
+    }
+
+    return { statePath, state };
+}
+
+function writeWorkspaceInstallState(statePath, state) {
+    const payload = {
+        version: 1,
+        updatedAt: state.updatedAt || nowISO(),
+        targets: state.targets || {},
+    };
+    fs.mkdirSync(path.dirname(statePath), { recursive: true });
+    fs.writeFileSync(statePath, `${JSON.stringify(payload, null, 2)}\n`, "utf8");
+}
+
+function recordWorkspaceInstallTargets(workspaceRoot, targetNames, options) {
+    const logicalTargets = normalizeTargets(targetNames).filter((targetName) => SHARED_AGENT_TARGETS.includes(targetName));
+    if (logicalTargets.length === 0) {
+        return;
+    }
+
+    if (options.dryRun) {
+        log(options, `[dry-run] 将写入工作区安装状态: ${getWorkspaceInstallStatePath(workspaceRoot)} [${logicalTargets.join(", ")}]`);
+        return;
+    }
+
+    const { statePath, state } = readWorkspaceInstallState(workspaceRoot);
+    const timestamp = nowISO();
+    for (const targetName of logicalTargets) {
+        const prev = normalizeTargetState(state.targets[targetName]) || {
+            version: "",
+            installedAt: "",
+            updatedAt: "",
+        };
+        state.targets[targetName] = {
+            version: pkg.version,
+            installedAt: prev.installedAt || timestamp,
+            updatedAt: timestamp,
+        };
+    }
+    state.updatedAt = timestamp;
+    writeWorkspaceInstallState(statePath, state);
+}
+
+function resolveWorkspaceInstallStateTargets(workspaceRoot) {
+    const { state } = readWorkspaceInstallState(workspaceRoot);
+    return normalizeTargets(Object.keys(state.targets || {}));
+}
+
 function sleepSync(ms) {
     const buffer = new SharedArrayBuffer(4);
     const view = new Int32Array(buffer);
@@ -899,19 +1012,41 @@ function normalizeTargets(rawTargets) {
     return result;
 }
 
+function resolveIndexedWorkspaceTargets(workspaceRoot) {
+    try {
+        const { index } = readWorkspaceIndex();
+        const record = findWorkspaceRecord(index, workspaceRoot);
+        if (!record) {
+            return [];
+        }
+        return normalizeTargets(Object.keys(record.targets || {}));
+    } catch (_err) {
+        return [];
+    }
+}
+
 function detectInstalledTargets(workspaceRoot) {
     const targets = [];
+    const localTargets = resolveWorkspaceInstallStateTargets(workspaceRoot);
+    const indexedTargets = resolveIndexedWorkspaceTargets(workspaceRoot);
     if (fs.existsSync(path.join(workspaceRoot, ".agent"))) {
-        targets.push("gemini");
+        const sharedTargets = localTargets
+            .filter((target) => SHARED_AGENT_TARGETS.includes(target))
+            .concat(indexedTargets.filter((target) => SHARED_AGENT_TARGETS.includes(target)));
+        if (sharedTargets.length > 0) {
+            targets.push(...sharedTargets);
+        } else {
+            targets.push("gemini");
+        }
     }
     if (fs.existsSync(path.join(workspaceRoot, ".agents")) || fs.existsSync(path.join(workspaceRoot, ".codex"))) {
         targets.push("codex");
     }
-    return targets;
+    return normalizeTargets(targets);
 }
 
 function isTargetInstalled(workspaceRoot, targetName) {
-    if (targetName === "gemini") {
+    if (SHARED_AGENT_TARGETS.includes(targetName)) {
         return fs.existsSync(path.join(workspaceRoot, ".agent"));
     }
     if (targetName === "codex") {
@@ -920,6 +1055,27 @@ function isTargetInstalled(workspaceRoot, targetName) {
     return false;
 }
 
+function groupTargetsByInstallSurface(targets) {
+    const normalizedTargets = normalizeTargets(targets);
+    const groups = [];
+    const sharedTargets = normalizedTargets.filter((target) => SHARED_AGENT_TARGETS.includes(target));
+    if (sharedTargets.length > 0) {
+        groups.push({
+            installSurface: ".agent",
+            adapterTarget: sharedTargets.includes("gemini") ? "gemini" : "antigravity",
+            logicalTargets: sharedTargets,
+        });
+    }
+    if (normalizedTargets.includes("codex")) {
+        groups.push({
+            installSurface: ".agents",
+            adapterTarget: "codex",
+            logicalTargets: ["codex"],
+        });
+    }
+    return groups;
+}
+
 function setQuietStatusExitCode(state) {
     process.exitCode = Object.prototype.hasOwnProperty.call(QUIET_STATUS_EXIT_CODES, state)
         ? QUIET_STATUS_EXIT_CODES[state]
@@ -1015,8 +1171,11 @@ function evaluateGlobalState() {
 }
 
 function createAdapter(targetName, workspaceRoot, options) {
-    if (targetName === "gemini") {
-        return new GeminiAdapter(workspaceRoot, options);
+    if (SHARED_AGENT_TARGETS.includes(targetName)) {
+        return new GeminiAdapter(workspaceRoot, {
+            ...options,
+            targetName,
+        });
     }
     if (targetName === "codex") {
         return new CodexAdapter(workspaceRoot, options);
@@ -1060,8 +1219,7 @@ function resolveTargetsForGlobalSync(options) {
     if (requested.length > 0) {
         return requested;
     }
-    // 保持 global sync 简洁：默认同步 codex + gemini；其中 gemini 会展开为 gemini-cli 与 antigravity。
-    return ["codex", "gemini"];
+    return [...SUPPORTED_TARGETS];
 }
 
 function resolveAgentInstallSource(options) {
@@ -1228,7 +1386,7 @@ function planGlobalSyncTasks(targetName, agentDir) {
         };
     }
 
-    if (targetName === "gemini") {
+    if (SHARED_AGENT_TARGETS.includes(targetName)) {
         const skillsRoot = path.join(agentDir, "skills");
         const skillNames = listSkillDirectories(skillsRoot);
         const tasks = [];
@@ -1310,7 +1468,7 @@ function applyGlobalSync(targetName, agentDir, timestamp, options) {
         }
     }
 
-    if (targetName === "gemini") {
+    if (SHARED_AGENT_TARGETS.includes(targetName)) {
         const skillsRoot = path.join(agentDir, "skills");
         return syncGlobalSkillsFromRoot(targetName, skillsRoot, timestamp, options);
     }
@@ -1447,6 +1605,10 @@ function getSpecHomeDir() {
     return path.join(resolveGlobalRootDir(), ".ling", "spec");
 }
 
+function getSpecWorkspaceDir() {
+    return path.join(resolveGlobalRootDir(), ".ling", "spec-workspace");
+}
+
 function getSpecStatePath() {
     return path.join(getSpecHomeDir(), "state.json");
 }
@@ -1524,6 +1686,46 @@ function ensureBundledSpecResources() {
     }
 }
 
+function listMissingFiles(rootDir, requiredRelPaths) {
+    if (!fs.existsSync(rootDir)) {
+        return requiredRelPaths.map((rel) => rel);
+    }
+    return requiredRelPaths.filter((rel) => !fs.existsSync(path.join(rootDir, ...rel.split("/"))));
+}
+
+function collectSpecOrphanIssues(specHome, hasStateFile) {
+    const issues = [];
+    const templatesDir = path.join(specHome, "templates");
+    const referencesDir = path.join(specHome, "references");
+    const profilesDir = path.join(specHome, "profiles");
+
+    if (fs.existsSync(templatesDir)) issues.push("Detected spec templates directory");
+    if (fs.existsSync(referencesDir)) issues.push("Detected spec references directory");
+    if (fs.existsSync(profilesDir)) issues.push("Detected spec profiles directory");
+
+    for (const targetName of SUPPORTED_TARGETS) {
+        for (const destination of getGlobalDestinations(targetName)) {
+            for (const skillName of SPEC_SKILL_NAMES) {
+                if (fs.existsSync(path.join(destination.skillsRoot, skillName, "SKILL.md"))) {
+                    issues.push(`Detected spec skill: ${destination.id}/${skillName}`);
+                }
+            }
+        }
+    }
+
+    if (issues.length === 0) {
+        return [];
+    }
+
+    if (!hasStateFile) {
+        issues.unshift("Spec artifacts detected but state.json missing (run: ling spec enable to repair)");
+    } else {
+        issues.unshift("Spec artifacts detected but no targets enabled (run: ling spec enable to reconcile or clean manually)");
+    }
+
+    return issues;
+}
+
 function backupDirSnapshot(sourceDir, backupDir, options, label) {
     if (!fs.existsSync(sourceDir)) {
         return "";
@@ -1560,6 +1762,59 @@ function removeDirIfExists(targetDir, options, label) {
     log(options, `[clean] 已删除 ${label}: ${targetDir}`);
 }
 
+function atomicWriteFile(targetPath, content, options, label) {
+    const targetDir = path.dirname(targetPath);
+    if (options.dryRun) {
+        log(options, `[dry-run] 将写入 ${label}: ${targetPath}`);
+        return;
+    }
+    fs.mkdirSync(targetDir, { recursive: true });
+    const tempPath = `${targetPath}.tmp-${Date.now()}-${Math.random().toString(36).slice(2, 8)}`;
+    fs.writeFileSync(tempPath, content, "utf8");
+    try {
+        if (fs.existsSync(targetPath)) {
+            const backupPath = `${targetPath}.bak-${Date.now()}-${Math.random().toString(36).slice(2, 5)}`;
+            fs.renameSync(targetPath, backupPath);
+            try {
+                fs.renameSync(tempPath, targetPath);
+            } catch (err) {
+                try {
+                    fs.renameSync(backupPath, targetPath);
+                } catch (restoreErr) {
+                    throw new Error(`临界失败: 无法将新版本写入目标且无法恢复旧版本。旧版本位于 ${backupPath}。错误: ${err.message}`);
+                }
+                throw err;
+            }
+            try {
+                fs.rmSync(backupPath, { force: true });
+            } catch (cleanupErr) {
+                log(options, `[warn] 无法清理备份文件 ${backupPath}: ${cleanupErr.message}`);
+            }
+            return;
+        }
+        fs.renameSync(tempPath, targetPath);
+    } catch (err) {
+        if (fs.existsSync(tempPath)) {
+            fs.rmSync(tempPath, { force: true });
+        }
+        throw new Error(`原子写入失败: ${err.message}`);
+    }
+}
+
+function backupFileSnapshot(sourcePath, backupPath, options, label) {
+    if (!fs.existsSync(sourcePath)) {
+        return "";
+    }
+    if (options.dryRun) {
+        log(options, `[dry-run] 将备份 ${label}: ${sourcePath} -> ${backupPath}`);
+        return backupPath;
+    }
+    fs.mkdirSync(path.dirname(backupPath), { recursive: true });
+    fs.copyFileSync(sourcePath, backupPath);
+    log(options, `[backup] 已备份 ${label}: ${sourcePath} -> ${backupPath}`);
+    return backupPath;
+}
+
 async function ensureSpecAssetsInstalled(state, timestamp, options, prompter) {
     const specHome = getSpecHomeDir();
     const assets = {
@@ -1571,14 +1826,37 @@ async function ensureSpecAssetsInstalled(state, timestamp, options, prompter) {
             sourceDir: path.join(BUNDLED_SPEC_DIR, "references"),
             destDir: path.join(specHome, "references"),
         },
+        profiles: {
+            sourceDir: path.join(BUNDLED_SPEC_DIR, "profiles"),
+            destDir: path.join(specHome, "profiles"),
+        },
     };
 
     for (const [assetName, config] of Object.entries(assets)) {
-        if (state.assets[assetName] && state.assets[assetName].installedAt) {
+        const existingAssetState = state.assets[assetName];
+        const hasState = existingAssetState && existingAssetState.installedAt;
+        const exists = fs.existsSync(config.destDir);
+        const mode = normalizeSpecAssetMode(existingAssetState);
+
+        if (mode === "kept" && exists) {
+            continue;
+        }
+
+        const equal = exists ? areDirectoriesEqual(config.sourceDir, config.destDir) : false;
+
+        if (exists && equal) {
+            if (!hasState) {
+                log(options, `[skip] Spec ${assetName} 已存在且一致，视为已启用: ${config.destDir}`);
+                state.assets[assetName] = {
+                    destPath: config.destDir,
+                    backupPath: "",
+                    installedAt: nowISO(),
+                    mode: "kept",
+                };
+            }
             continue;
         }
 
-        const exists = fs.existsSync(config.destDir);
         let action = exists ? "backup" : "";
         if (exists && prompter) {
             action = await prompter.resolveConflict({
@@ -1586,6 +1864,8 @@ async function ensureSpecAssetsInstalled(state, timestamp, options, prompter) {
                 label: `Spec ${assetName}`,
                 path: config.destDir,
             });
+        } else if (exists && !prompter && (options.nonInteractive || !process.stdin.isTTY)) {
+            action = "backup";
         }
 
         if (action === "keep") {
@@ -1650,26 +1930,59 @@ function restoreSpecAsset(assetState, options, label) {
 }
 
 async function enableSpecTarget(targetName, state, timestamp, options, prompter) {
-    if (state.targets[targetName]) {
-        log(options, `[skip] Spec 目标已启用: ${targetName}`);
-        return;
-    }
-
     const destinations = getGlobalDestinations(targetName);
-    const targetState = {
+    const existingTargetState = state.targets[targetName];
+    if (existingTargetState) {
+        log(options, `[info] Spec 目标已启用，执行一致性修复: ${targetName}`);
+    }
+    const targetState = existingTargetState || {
         enabledAt: nowISO(),
         consumers: {},
     };
 
     for (const destination of destinations) {
+        const existingConsumerState =
+            targetState.consumers && targetState.consumers[destination.id] ? targetState.consumers[destination.id] : null;
         const consumerState = {
             skills: [],
         };
+        const existingSkills = new Map();
+        if (existingConsumerState && Array.isArray(existingConsumerState.skills)) {
+            for (const skill of existingConsumerState.skills) {
+                if (skill && typeof skill.name === "string") {
+                    existingSkills.set(skill.name, skill);
+                }
+            }
+        }
 
         for (const skillName of SPEC_SKILL_NAMES) {
             const srcDir = path.join(BUNDLED_SPEC_DIR, "skills", skillName);
             const destDir = path.join(destination.skillsRoot, skillName);
+            const existingSkillState = existingSkills.get(skillName);
+            const mode = normalizeSpecAssetMode(existingSkillState);
             const exists = fs.existsSync(destDir);
+            const equal = exists ? areDirectoriesEqual(srcDir, destDir) : false;
+
+            if (mode === "kept" && exists) {
+                consumerState.skills.push({
+                    name: skillName,
+                    destPath: destDir,
+                    backupPath: existingSkillState && existingSkillState.backupPath ? existingSkillState.backupPath : "",
+                    mode: "kept",
+                });
+                continue;
+            }
+
+            if (exists && equal) {
+                consumerState.skills.push({
+                    name: skillName,
+                    destPath: destDir,
+                    backupPath: existingSkillState && existingSkillState.backupPath ? existingSkillState.backupPath : "",
+                    mode: existingSkillState && existingSkillState.mode ? existingSkillState.mode : "kept",
+                });
+                continue;
+            }
+
             let action = exists ? "backup" : "";
             if (exists && prompter) {
                 action = await prompter.resolveConflict({
@@ -1677,6 +1990,8 @@ async function enableSpecTarget(targetName, state, timestamp, options, prompter)
                     label: `Spec Skill ${destination.id}/${skillName}`,
                     path: destDir,
                 });
+            } else if (exists && !prompter && (options.nonInteractive || !process.stdin.isTTY)) {
+                action = "backup";
             }
 
             if (action === "keep") {
@@ -1684,13 +1999,13 @@ async function enableSpecTarget(targetName, state, timestamp, options, prompter)
                 consumerState.skills.push({
                     name: skillName,
                     destPath: destDir,
-                    backupPath: "",
+                    backupPath: existingSkillState && existingSkillState.backupPath ? existingSkillState.backupPath : "",
                     mode: "kept",
                 });
                 continue;
             }
 
-            let backupPath = "";
+            let backupPath = existingSkillState && existingSkillState.backupPath ? existingSkillState.backupPath : "";
             if (exists && action !== "remove") {
                 backupPath = backupDirSnapshot(
                     destDir,
@@ -1742,14 +2057,28 @@ function disableSpecTarget(targetName, state, options) {
 }
 
 function evaluateSpecState() {
+    const statePath = getSpecStatePath();
+    const hasStateFile = fs.existsSync(statePath);
     const { state } = readSpecState();
     const targetNames = Object.keys(state.targets || {});
     if (targetNames.length === 0) {
+        const specHome = getSpecHomeDir();
+        const orphanIssues = collectSpecOrphanIssues(specHome, hasStateFile);
+        if (orphanIssues.length > 0) {
+            return {
+                state: "broken",
+                targets: [],
+                assets: state.assets || {},
+                specHome,
+                issues: orphanIssues,
+            };
+        }
         return {
             state: "missing",
             targets: [],
             assets: state.assets || {},
-            specHome: getSpecHomeDir(),
+            specHome,
+            issues: [],
         };
     }
 
@@ -1765,10 +2094,23 @@ function evaluateSpecState() {
         }
     }
 
-    for (const assetName of ["templates", "references"]) {
+    const specHome = getSpecHomeDir();
+    const assetRequirements = {
+        templates: { dir: path.join(specHome, "templates"), files: SPEC_TEMPLATE_REQUIRED_FILES },
+        references: { dir: path.join(specHome, "references"), files: SPEC_REFERENCE_REQUIRED_FILES },
+        profiles: { dir: path.join(specHome, "profiles"), files: SPEC_PROFILE_REQUIRED_FILES },
+    };
+
+    for (const assetName of ["templates", "references", "profiles"]) {
         const asset = state.assets[assetName];
         if (!asset || !asset.destPath || !fs.existsSync(asset.destPath)) {
             issues.push(`Missing spec asset: ${assetName}`);
+            continue;
+        }
+        const requirement = assetRequirements[assetName];
+        const missing = listMissingFiles(requirement.dir, requirement.files);
+        for (const rel of missing) {
+            issues.push(`Missing spec asset file: ${assetName}/${rel}`);
         }
     }
 
@@ -1777,7 +2119,7 @@ function evaluateSpecState() {
         targets: targetNames,
         issues,
         assets: state.assets || {},
-        specHome: getSpecHomeDir(),
+        specHome,
     };
 }
 
@@ -1808,6 +2150,337 @@ function commandSpecStatus(options) {
     setQuietStatusExitCode(summary.state);
 }
 
+function stripUtf8Bom(text) {
+    if (!text) return "";
+    return text.charCodeAt(0) === 0xFEFF ? text.slice(1) : text;
+}
+
+function parseCsvLine(line) {
+    const cells = [];
+    let current = "";
+    let inQuotes = false;
+
+    for (let i = 0; i < line.length; i++) {
+        const ch = line[i];
+        if (ch === "\"") {
+            if (inQuotes && line[i + 1] === "\"") {
+                current += "\"";
+                i += 1;
+                continue;
+            }
+            inQuotes = !inQuotes;
+            continue;
+        }
+        if (ch === "," && !inQuotes) {
+            cells.push(current);
+            current = "";
+            continue;
+        }
+        current += ch;
+    }
+    cells.push(current);
+    return cells;
+}
+
+function analyzeIssuesCsv(issuesPath) {
+    if (!fs.existsSync(issuesPath)) {
+        return { status: "missing", issues: ["Missing issues.csv"], stats: { total: 0, inProgress: 0 } };
+    }
+
+    const raw = stripUtf8Bom(fs.readFileSync(issuesPath, "utf8"));
+    const lines = raw.split(/\r?\n/).filter((line) => line.trim().length > 0);
+    if (lines.length === 0) {
+        return { status: "broken", issues: ["issues.csv is empty"], stats: { total: 0, inProgress: 0 } };
+    }
+
+    const header = parseCsvLine(lines[0]).map((cell) => cell.trim());
+    const statusIndex = header.findIndex((cell) => cell === "状态" || cell.includes("(状态)") || /状态/.test(cell));
+    if (statusIndex < 0) {
+        return { status: "broken", issues: ["issues.csv header missing 状态 column"], stats: { total: Math.max(0, lines.length - 1), inProgress: 0 } };
+    }
+
+    const allowedStates = new Set(["未开始", "进行中", "已完成"]);
+    let total = 0;
+    let inProgress = 0;
+    const issues = [];
+
+    for (let i = 1; i < lines.length; i++) {
+        const row = parseCsvLine(lines[i]);
+        const isEmpty = row.every((cell) => String(cell || "").trim() === "");
+        if (isEmpty) {
+            continue;
+        }
+        total += 1;
+        const state = String(row[statusIndex] || "").trim();
+        if (!allowedStates.has(state)) {
+            issues.push(`Invalid 状态 at row ${i + 1}: ${state || "(empty)"}`);
+            continue;
+        }
+        if (state === "进行中") {
+            inProgress += 1;
+        }
+    }
+
+    if (inProgress > 1) {
+        issues.push(`Multiple tasks in 进行中: ${inProgress}`);
+    }
+
+    return {
+        status: issues.length > 0 ? "broken" : "ok",
+        issues,
+        stats: { total, inProgress },
+    };
+}
+
+function checkSpecProjectIntegrity(workspaceRoot) {
+    const issues = [];
+    const issuesPath = path.join(workspaceRoot, "issues.csv");
+    const issuesResult = analyzeIssuesCsv(issuesPath);
+
+    const specDir = path.join(workspaceRoot, ".ling", "spec");
+    const templatesDir = path.join(specDir, "templates");
+    const referencesDir = path.join(specDir, "references");
+    const profilesDir = path.join(specDir, "profiles");
+
+    const hasSpecDir = fs.existsSync(specDir);
+    const globalSpecSummary = !hasSpecDir && issuesResult.status !== "missing" ? evaluateSpecState() : null;
+    const canFallbackToGlobalSpec = Boolean(globalSpecSummary && globalSpecSummary.state === "installed");
+    if (!hasSpecDir) {
+        if (issuesResult.status !== "missing") {
+            if (!canFallbackToGlobalSpec) {
+                issues.push("Missing .ling/spec directory (run: ling spec init)");
+                if (globalSpecSummary && globalSpecSummary.state === "missing") {
+                    issues.push("Global Spec is not enabled (run: ling spec enable)");
+                } else if (globalSpecSummary && globalSpecSummary.state === "broken") {
+                    issues.push("Global Spec is broken (run: ling spec enable)");
+                    for (const issue of globalSpecSummary.issues || []) {
+                        issues.push(`Global Spec issue: ${issue}`);
+                    }
+                }
+            }
+        }
+    } else {
+        if (issuesResult.status === "missing") {
+            issues.push("Missing issues.csv (run: ling spec init)");
+        }
+        for (const rel of SPEC_TEMPLATE_REQUIRED_FILES) {
+            const filePath = path.join(templatesDir, rel);
+            if (!fs.existsSync(filePath)) {
+                issues.push(`Missing spec template: .ling/spec/templates/${rel}`);
+            }
+        }
+        for (const rel of SPEC_REFERENCE_REQUIRED_FILES) {
+            const filePath = path.join(referencesDir, rel);
+            if (!fs.existsSync(filePath)) {
+                issues.push(`Missing spec reference: .ling/spec/references/${rel}`);
+            }
+        }
+        for (const rel of SPEC_PROFILE_REQUIRED_FILES) {
+            const filePath = path.join(profilesDir, ...rel.split("/"));
+            if (!fs.existsSync(filePath)) {
+                issues.push(`Missing spec profile: .ling/spec/profiles/${rel}`);
+            }
+        }
+    }
+
+    if (issuesResult.status === "broken") {
+        issues.push(...issuesResult.issues);
+    }
+
+    const hasAnySpecSignal = hasSpecDir || issuesResult.status !== "missing";
+    if (!hasAnySpecSignal) {
+        return { status: "missing", issues: [], stats: { total: 0, inProgress: 0 } };
+    }
+
+    return {
+        status: issues.length > 0 ? "broken" : "ok",
+        issues,
+        stats: issuesResult.stats,
+    };
+}
+
+function resolveWorkspaceSpecBackupRoot(workspaceRoot, timestamp) {
+    return path.join(workspaceRoot, ".ling", "backups", "spec", timestamp, "before");
+}
+
+async function commandSpecInit(options) {
+    const workspaceRoot = options.path
+        ? resolveWorkspaceRoot(options.path)
+        : (options.specWorkspace ? getSpecWorkspaceDir() : resolveWorkspaceRoot());
+    const csvOnly = Boolean(options.csvOnly);
+    const prompter = createConflictPrompter(options);
+    const timestamp = nowISO().replace(/[:.]/g, "-");
+    const backupRoot = resolveWorkspaceSpecBackupRoot(workspaceRoot, timestamp);
+
+    const specDir = path.join(workspaceRoot, ".ling", "spec");
+    let specSourceDir = BUNDLED_SPEC_DIR;
+    let cleanupSpec = null;
+    if (options.branch) {
+        const remote = cloneBranchSpecDir(options.branch, {
+            quiet: options.quiet,
+            logger: log.bind(null, options),
+        });
+        specSourceDir = remote.specDir;
+        cleanupSpec = remote.cleanup;
+    }
+    const assets = {
+        templates: {
+            sourceDir: path.join(specSourceDir, "templates"),
+            destDir: path.join(specDir, "templates"),
+        },
+        references: {
+            sourceDir: path.join(specSourceDir, "references"),
+            destDir: path.join(specDir, "references"),
+        },
+        profiles: {
+            sourceDir: path.join(specSourceDir, "profiles"),
+            destDir: path.join(specDir, "profiles"),
+        },
+    };
+
+    try {
+        fs.mkdirSync(workspaceRoot, { recursive: true });
+
+        if (!csvOnly) {
+            for (const [assetName, config] of Object.entries(assets)) {
+                const exists = fs.existsSync(config.destDir);
+                if (exists && areDirectoriesEqual(config.sourceDir, config.destDir)) {
+                    log(options, `[skip] Spec ${assetName} 已最新，无需覆盖: ${config.destDir}`);
+                    continue;
+                }
+
+                let action = exists ? "backup" : "";
+                if (exists && prompter) {
+                    action = await prompter.resolveConflict({
+                        category: "spec:project:assets",
+                        label: `Spec ${assetName}`,
+                        path: config.destDir,
+                    });
+                } else if (exists && !prompter && (options.force || options.nonInteractive || !process.stdin.isTTY)) {
+                    action = "backup";
+                }
+
+                if (action === "keep") {
+                    log(options, `[skip] 已保留 Spec ${assetName} 资产，不覆盖: ${config.destDir}`);
+                    continue;
+                }
+
+                if (exists && action !== "remove") {
+                    backupDirSnapshot(config.destDir, path.join(backupRoot, "assets", assetName), options, `Spec ${assetName}`);
+                } else if (exists && action === "remove") {
+                    removeDirIfExists(config.destDir, options, `Spec ${assetName}`);
+                }
+                applyDirSnapshot(config.sourceDir, config.destDir, options, `Spec ${assetName}`);
+            }
+        }
+
+        const issuesPath = path.join(workspaceRoot, "issues.csv");
+        let issuesTemplatePath = path.join(specSourceDir, "templates", "issues.template.csv");
+        if (csvOnly && !options.branch) {
+            const globalTemplatePath = path.join(getSpecHomeDir(), "templates", "issues.template.csv");
+            if (fs.existsSync(globalTemplatePath)) {
+                issuesTemplatePath = globalTemplatePath;
+            } else if (!options.quiet) {
+                log(options, "[warn] 未检测到全局 Spec templates，已使用内置模板生成 issues.csv。可执行: ling spec enable");
+            }
+        }
+        const issuesTemplate = stripUtf8Bom(fs.readFileSync(issuesTemplatePath, "utf8"));
+        const hasIssues = fs.existsSync(issuesPath);
+        if (hasIssues) {
+            let action = "backup";
+            if (prompter) {
+                action = await prompter.resolveConflict({
+                    category: "spec:project:file",
+                    label: "issues.csv",
+                    path: issuesPath,
+                });
+            }
+            if (action === "keep") {
+                log(options, "[skip] 已保留现有 issues.csv，不覆盖");
+            } else {
+                if (action !== "remove") {
+                    backupFileSnapshot(issuesPath, path.join(backupRoot, "issues.csv"), options, "issues.csv");
+                } else if (!options.dryRun) {
+                    fs.rmSync(issuesPath, { force: true });
+                }
+                atomicWriteFile(issuesPath, `${issuesTemplate.trimEnd()}\n`, options, "issues.csv");
+                log(options, options.dryRun ? `[dry-run] 将写入任务跟踪文件: ${issuesPath}` : `[ok] 已写入任务跟踪文件: ${issuesPath}`);
+            }
+        } else {
+            atomicWriteFile(issuesPath, `${issuesTemplate.trimEnd()}\n`, options, "issues.csv");
+            log(options, options.dryRun ? `[dry-run] 将创建任务跟踪文件: ${issuesPath}` : `[ok] 已创建任务跟踪文件: ${issuesPath}`);
+        }
+
+        const docsReviewsDir = path.join(workspaceRoot, "docs", "reviews");
+        const docsHandoffDir = path.join(workspaceRoot, "docs", "handoff");
+        if (options.dryRun) {
+            log(options, `[dry-run] 将确保目录存在: ${docsReviewsDir}`);
+            log(options, `[dry-run] 将确保目录存在: ${docsHandoffDir}`);
+        } else {
+            fs.mkdirSync(docsReviewsDir, { recursive: true });
+            fs.mkdirSync(docsHandoffDir, { recursive: true });
+        }
+
+        const requestedTargets = normalizeTargets(options.targets);
+        const isSpecWorkspaceMode = Boolean(!options.path && options.specWorkspace);
+        const shouldInitTargets = isSpecWorkspaceMode ? true : requestedTargets.length > 0;
+        const targets = shouldInitTargets ? (requestedTargets.length > 0 ? requestedTargets : [...SUPPORTED_TARGETS]) : [];
+        if (targets.length > 0) {
+            await initTargets(workspaceRoot, targets, options, prompter);
+        }
+
+        log(options, `[ok] Spec 初始化完成: ${workspaceRoot}`);
+    } finally {
+        if (cleanupSpec) cleanupSpec();
+        if (prompter) prompter.close();
+    }
+}
+
+function commandSpecDoctor(options) {
+    const workspaceRoot = options.path
+        ? resolveWorkspaceRoot(options.path)
+        : (options.specWorkspace ? getSpecWorkspaceDir() : resolveWorkspaceRoot());
+    const result = checkSpecProjectIntegrity(workspaceRoot);
+    const state = result.status === "ok" ? "installed" : result.status;
+
+    if (options.quiet) {
+        console.log(state);
+        setQuietStatusExitCode(state);
+        return;
+    }
+
+    if (state === "missing") {
+        console.log("[warn] 未检测到 Spec 项目资产");
+        console.log(`   工作区: ${workspaceRoot}`);
+        setQuietStatusExitCode("missing");
+        return;
+    }
+
+    console.log(state === "installed" ? "[ok] Spec 项目资产状态正常" : "[warn] Spec 项目资产存在问题");
+    console.log(`   工作区: ${workspaceRoot}`);
+    const specDir = path.join(workspaceRoot, ".ling", "spec");
+    const hasSpecDir = fs.existsSync(specDir);
+    const issuesPath = path.join(workspaceRoot, "issues.csv");
+    const hasIssues = fs.existsSync(issuesPath);
+    if (hasSpecDir) {
+        console.log("   模式: project");
+        console.log(`   Spec 根目录: ${specDir}`);
+    } else if (hasIssues) {
+        const globalSpecSummary = evaluateSpecState();
+        const fallback = globalSpecSummary.state === "installed";
+        console.log(`   模式: csv-only${fallback ? " (global fallback)" : ""}`);
+        if (fallback) {
+            console.log(`   Spec 根目录: ${getSpecHomeDir()}`);
+        }
+    }
+    console.log(`   任务数: ${result.stats.total}`);
+    console.log(`   进行中: ${result.stats.inProgress}`);
+    for (const issue of result.issues || []) {
+        console.log(`   Issue: ${issue}`);
+    }
+    setQuietStatusExitCode(state);
+}
+
 async function commandSpecEnable(options) {
     ensureBundledSpecResources();
     const targets = resolveTargetsForSpec(options);
@@ -1844,6 +2517,7 @@ function commandSpecDisable(options) {
     if (remainingTargets.length === 0) {
         restoreSpecAsset(state.assets.templates, options, "Spec templates");
         restoreSpecAsset(state.assets.references, options, "Spec references");
+        restoreSpecAsset(state.assets.profiles, options, "Spec profiles");
         state.assets = {};
     }
 
@@ -1851,6 +2525,14 @@ function commandSpecDisable(options) {
     if (!options.dryRun) {
         if (remainingTargets.length === 0) {
             removeSpecStateFile();
+            const specHome = getSpecHomeDir();
+            try {
+                if (fs.existsSync(specHome) && fs.readdirSync(specHome).length === 0) {
+                    fs.rmdirSync(specHome);
+                }
+            } catch (err) {
+                log(options, `[warn] 无法清理 Spec 根目录: ${err.message}`);
+            }
         } else {
             writeSpecState(statePath, state);
         }
@@ -1870,87 +2552,100 @@ async function commandSpec(options) {
     if (subcommand === "disable") {
         return commandSpecDisable(options);
     }
+    if (subcommand === "init") {
+        return await commandSpecInit(options);
+    }
+    if (subcommand === "doctor") {
+        return commandSpecDoctor(options);
+    }
     throw new Error(`未知 spec 子命令: ${subcommand}`);
 }
 
-async function commandInit(options) {
-    const workspaceRoot = resolveWorkspaceRoot(options.path);
-    const targets = await resolveTargetsForInit(options);
-    const prompter = createConflictPrompter(options);
+async function initTargets(workspaceRoot, targets, options, prompter) {
+    for (const group of groupTargetsByInstallSurface(targets)) {
+        const runOptions = { ...options };
+        const conflicts = [];
 
-    try {
-        for (const target of targets) {
-            const runOptions = { ...options };
-            const conflicts = [];
+        if (group.installSurface === ".agent") {
+            const agentDir = path.join(workspaceRoot, ".agent");
+            if (fs.existsSync(agentDir)) {
+                conflicts.push({
+                    category: "project:shared-agent",
+                    label: ".agent",
+                    path: agentDir,
+                    target: group.logicalTargets.join(","),
+                });
+            }
+        }
 
-            if (target === "gemini") {
-                const agentDir = path.join(workspaceRoot, ".agent");
-                if (fs.existsSync(agentDir)) {
+        if (group.adapterTarget === "codex") {
+            const managedDir = path.join(workspaceRoot, ".agents");
+            const legacyDir = path.join(workspaceRoot, ".codex");
+            if (fs.existsSync(managedDir) || fs.existsSync(legacyDir)) {
+                if (fs.existsSync(managedDir)) {
                     conflicts.push({
-                        category: "project:gemini",
-                        label: ".agent",
-                        path: agentDir,
+                        category: "project:codex",
+                        label: ".agents",
+                        path: managedDir,
                         target,
                     });
                 }
-            }
-
-            if (target === "codex") {
-                const managedDir = path.join(workspaceRoot, ".agents");
-                const legacyDir = path.join(workspaceRoot, ".codex");
-                if (fs.existsSync(managedDir) || fs.existsSync(legacyDir)) {
-                    if (fs.existsSync(managedDir)) {
-                        conflicts.push({
-                            category: "project:codex",
-                            label: ".agents",
-                            path: managedDir,
-                            target,
-                        });
-                    }
-                    if (fs.existsSync(legacyDir)) {
-                        conflicts.push({
-                            category: "project:codex",
-                            label: ".codex",
-                            path: legacyDir,
-                            target,
-                        });
-                    }
+                if (fs.existsSync(legacyDir)) {
+                    conflicts.push({
+                        category: "project:codex",
+                        label: ".codex",
+                        path: legacyDir,
+                        target,
+                    });
                 }
             }
+        }
 
-            if (conflicts.length > 0) {
-                if (!prompter && !runOptions.force) {
-                    throw new Error("检测到已有资产且当前环境不可交互，请使用 --force 或在交互终端中重试。");
-                }
+        if (conflicts.length > 0) {
+            if (!prompter && !runOptions.force) {
+                throw new Error("检测到已有资产且当前环境不可交互，请使用 --force 或在交互终端中重试。");
+            }
 
-                const timestamp = nowISO().replace(/[:.]/g, "-");
-                let shouldSkip = false;
+            const timestamp = nowISO().replace(/[:.]/g, "-");
+            let shouldSkip = false;
 
-                for (const conflict of conflicts) {
-                    const action = prompter ? await prompter.resolveConflict(conflict) : "backup";
-                    if (action === "keep") {
-                        log(options, `[skip] 已保留现有资产，跳过初始化: ${conflict.label}`);
-                        shouldSkip = true;
-                        break;
-                    }
-                    if (action === "backup") {
-                        const backupRootName = conflict.label === ".agent" ? ".agent-backup" : ".agents-backup";
-                        backupWorkspaceDir(workspaceRoot, conflict.path, backupRootName, timestamp, options, `工作区资产 ${conflict.label}`);
-                    }
-                    // remove/backup 都需要强制覆盖才能继续
-                    runOptions.force = true;
+            for (const conflict of conflicts) {
+                const action = prompter ? await prompter.resolveConflict(conflict) : "backup";
+                if (action === "keep") {
+                    log(options, `[skip] 已保留现有资产，跳过初始化: ${conflict.label}`);
+                    shouldSkip = true;
+                    break;
                 }
-
-                if (shouldSkip) {
-                    continue;
+                if (action === "backup") {
+                    const backupRootName = conflict.label === ".agent" ? ".agent-backup" : ".agents-backup";
+                    backupWorkspaceDir(workspaceRoot, conflict.path, backupRootName, timestamp, options, `工作区资产 ${conflict.label}`);
                 }
+                // remove/backup 都需要强制覆盖才能继续
+                runOptions.force = true;
             }
 
-            const adapter = createAdapter(target, workspaceRoot, runOptions);
-            log(options, `[sync] 正在初始化目标 [${target}] ...`);
-            adapter.install(BUNDLED_AGENT_DIR);
+            if (shouldSkip) {
+                continue;
+            }
+        }
+
+        const adapter = createAdapter(group.adapterTarget, workspaceRoot, runOptions);
+        log(options, `[sync] 正在初始化目标 [${group.logicalTargets.join(", ")}] ...`);
+        adapter.install(BUNDLED_AGENT_DIR);
+        recordWorkspaceInstallTargets(workspaceRoot, group.logicalTargets, runOptions);
+        for (const target of group.logicalTargets) {
             registerWorkspaceTarget(workspaceRoot, target, runOptions);
         }
+    }
+}
+
+async function commandInit(options) {
+    const workspaceRoot = resolveWorkspaceRoot(options.path);
+    const targets = await resolveTargetsForInit(options);
+    const prompter = createConflictPrompter(options);
+
+    try {
+        await initTargets(workspaceRoot, targets, options, prompter);
     } finally {
         if (prompter) prompter.close();
     }
@@ -2025,71 +2720,73 @@ async function commandUpdate(options) {
 
     let updatedAny = false;
     try {
-        for (const target of targets) {
-        if (!isTargetInstalled(workspaceRoot, target) && options.targets.length > 0) {
-            throw new Error(`目标未安装: ${target}`);
-        }
-        if (!isTargetInstalled(workspaceRoot, target)) {
-            log(options, `[skip] 目标未安装，跳过: ${target}`);
-            continue;
-        }
+        for (const group of groupTargetsByInstallSurface(targets)) {
+            if (!isTargetInstalled(workspaceRoot, group.adapterTarget) && options.targets.length > 0) {
+                throw new Error(`目标未安装: ${group.logicalTargets.join(", ")}`);
+            }
+            if (!isTargetInstalled(workspaceRoot, group.adapterTarget)) {
+                log(options, `[skip] 目标未安装，跳过: ${group.logicalTargets.join(", ")}`);
+                continue;
+            }
 
-        const runOptions = { ...options, force: true };
+            const runOptions = { ...options, force: true };
+            const timestamp = nowISO().replace(/[:.]/g, "-");
 
-        const timestamp = nowISO().replace(/[:.]/g, "-");
-        if (target === "gemini") {
-            const agentDir = path.join(workspaceRoot, ".agent");
-            if (fs.existsSync(agentDir) && !areDirectoriesEqual(BUNDLED_AGENT_DIR, agentDir)) {
-                let action = "backup";
-                if (prompter) {
-                    action = await prompter.resolveConflict({
-                        category: "project:gemini",
-                        label: ".agent",
-                        path: agentDir,
-                        target,
-                    });
-                }
-                if (action === "keep") {
-                    log(options, "[skip] 已保留现有资产，跳过更新: .agent");
-                    continue;
-                }
-                if (action === "backup") {
-                    backupWorkspaceDir(workspaceRoot, agentDir, ".agent-backup", timestamp, options, "工作区资产 .agent");
+            if (group.installSurface === ".agent") {
+                const agentDir = path.join(workspaceRoot, ".agent");
+                if (fs.existsSync(agentDir) && !areDirectoriesEqual(BUNDLED_AGENT_DIR, agentDir)) {
+                    let action = "backup";
+                    if (prompter) {
+                        action = await prompter.resolveConflict({
+                            category: "project:shared-agent",
+                            label: ".agent",
+                            path: agentDir,
+                            target: group.logicalTargets.join(","),
+                        });
+                    }
+                    if (action === "keep") {
+                        log(options, "[skip] 已保留现有资产，跳过更新: .agent");
+                        continue;
+                    }
+                    if (action === "backup") {
+                        backupWorkspaceDir(workspaceRoot, agentDir, ".agent-backup", timestamp, options, "工作区资产 .agent");
+                    }
                 }
             }
-        }
 
-        if (target === "codex") {
-            const managedDir = path.join(workspaceRoot, ".agents");
-            const legacyDir = path.join(workspaceRoot, ".codex");
-            const activeDir = fs.existsSync(managedDir) ? managedDir : legacyDir;
-            const conflict = evaluateCodexUpdateConflict(activeDir);
-            if (conflict.hasConflict) {
-                let action = "backup";
-                if (prompter) {
-                    action = await prompter.resolveConflict({
-                        category: "project:codex",
-                        label: fs.existsSync(managedDir) ? ".agents" : ".codex",
-                        path: activeDir,
-                        target,
-                    });
-                }
-                if (action === "keep") {
-                    log(options, `[skip] 已保留现有资产，跳过更新: ${path.basename(activeDir)}`);
-                    continue;
-                }
-                if (action === "backup") {
-                    const backupRootName = ".agents-backup";
-                    backupWorkspaceDir(workspaceRoot, activeDir, backupRootName, timestamp, options, `工作区资产 ${path.basename(activeDir)}`);
+            if (group.adapterTarget === "codex") {
+                const managedDir = path.join(workspaceRoot, ".agents");
+                const legacyDir = path.join(workspaceRoot, ".codex");
+                const activeDir = fs.existsSync(managedDir) ? managedDir : legacyDir;
+                const conflict = evaluateCodexUpdateConflict(activeDir);
+                if (conflict.hasConflict) {
+                    let action = "backup";
+                    if (prompter) {
+                        action = await prompter.resolveConflict({
+                            category: "project:codex",
+                            label: fs.existsSync(managedDir) ? ".agents" : ".codex",
+                            path: activeDir,
+                            target: group.logicalTargets.join(","),
+                        });
+                    }
+                    if (action === "keep") {
+                        log(options, `[skip] 已保留现有资产，跳过更新: ${path.basename(activeDir)}`);
+                        continue;
+                    }
+                    if (action === "backup") {
+                        backupWorkspaceDir(workspaceRoot, activeDir, ".agents-backup", timestamp, options, `工作区资产 ${path.basename(activeDir)}`);
+                    }
                 }
             }
-        }
 
-        const adapter = createAdapter(target, workspaceRoot, runOptions);
-        log(options, `[sync] 更新 [${target}] ...`);
-        adapter.update(BUNDLED_AGENT_DIR);
-        registerWorkspaceTarget(workspaceRoot, target, runOptions);
-        updatedAny = true;
+            const adapter = createAdapter(group.adapterTarget, workspaceRoot, runOptions);
+            log(options, `[sync] 更新 [${group.logicalTargets.join(", ")}] ...`);
+            adapter.update(BUNDLED_AGENT_DIR);
+            recordWorkspaceInstallTargets(workspaceRoot, group.logicalTargets, runOptions);
+            for (const target of group.logicalTargets) {
+                registerWorkspaceTarget(workspaceRoot, target, runOptions);
+            }
+            updatedAny = true;
         }
     } finally {
         if (prompter) prompter.close();
@@ -2182,7 +2879,7 @@ async function commandUpdateAll(options) {
         const installedTargets = detectInstalledTargets(workspacePath);
         let targets = [];
         if (requestedTargets.length > 0) {
-            targets = installedTargets.filter((target) => requestedTargets.includes(target));
+            targets = requestedTargets.filter((target) => isTargetInstalled(workspacePath, target));
         } else {
             targets = [...Object.keys(item.targets || {}), ...installedTargets];
         }
@@ -2198,9 +2895,9 @@ async function commandUpdateAll(options) {
         log(options, `[sync] [${i + 1}/${records.length}] 更新: ${workspacePath} [${targets.join(", ")}]`);
 
         const updatedTargets = [];
-        for (const target of targets) {
-            if (!isTargetInstalled(workspacePath, target)) {
-                log(options, `[skip] [${i + 1}/${records.length}] 目标未安装，跳过: ${target}`);
+        for (const group of groupTargetsByInstallSurface(targets)) {
+            if (!isTargetInstalled(workspacePath, group.adapterTarget)) {
+                log(options, `[skip] [${i + 1}/${records.length}] 目标未安装，跳过: ${group.logicalTargets.join(", ")}`);
                 continue;
             }
 
@@ -2214,19 +2911,19 @@ async function commandUpdateAll(options) {
 
                 const timestampForBackup = nowISO().replace(/[:.]/g, "-");
 
-                if (target === "gemini") {
+                if (group.installSurface === ".agent") {
                     const agentDir = path.join(workspacePath, ".agent");
                     if (fs.existsSync(agentDir) && !areDirectoriesEqual(BUNDLED_AGENT_DIR, agentDir)) {
                         let action = "backup";
                         if (prompter) {
                             action = await prompter.resolveConflict({
-                                category: "update-all:project:gemini",
+                                category: "update-all:project:shared-agent",
                                 label: `.agent (${workspacePath})`,
                                 path: agentDir,
                             });
                         }
                         if (action === "keep") {
-                            log(options, `[skip] [${i + 1}/${records.length}] 已保留现有资产，跳过更新: ${workspacePath} [gemini]`);
+                            log(options, `[skip] [${i + 1}/${records.length}] 已保留现有资产，跳过更新: ${workspacePath} [${group.logicalTargets.join(", ")}]`);
                             continue;
                         }
                         if (action === "backup") {
@@ -2235,7 +2932,7 @@ async function commandUpdateAll(options) {
                     }
                 }
 
-                if (target === "codex") {
+                if (group.adapterTarget === "codex") {
                     const managedDir = path.join(workspacePath, ".agents");
                     const legacyDir = path.join(workspacePath, ".codex");
                     const activeDir = fs.existsSync(managedDir) ? managedDir : legacyDir;
@@ -2259,13 +2956,14 @@ async function commandUpdateAll(options) {
                     }
                 }
 
-                const adapter = createAdapter(target, workspacePath, runOptions);
+                const adapter = createAdapter(group.adapterTarget, workspacePath, runOptions);
                 adapter.update(BUNDLED_AGENT_DIR);
-                updatedTargets.push(target);
+                recordWorkspaceInstallTargets(workspacePath, group.logicalTargets, runOptions);
+                updatedTargets.push(...group.logicalTargets);
             } catch (err) {
                 failed += 1;
                 if (!options.quiet) {
-                    console.error(`[error] 更新失败: ${workspacePath} [${target}]`);
+                    console.error(`[error] 更新失败: ${workspacePath} [${group.logicalTargets.join(", ")}]`);
                     console.error(`   ${err.message}`);
                 }
             }
@@ -2385,6 +3083,22 @@ async function commandDoctor(options) {
         }
     }
 
+    const specResult = checkSpecProjectIntegrity(workspaceRoot);
+    if (specResult.status !== "missing") {
+        out(`\n[SPEC] 检查 Spec 项目资产...`);
+        if (specResult.status === "ok") {
+            out("  [ok] 状态正常");
+            out(`     - 任务数: ${specResult.stats.total}, 进行中: ${specResult.stats.inProgress}`);
+        } else {
+            out(`  [error] 状态: ${specResult.status}`);
+            out(`     - 任务数: ${specResult.stats.total}, 进行中: ${specResult.stats.inProgress}`);
+            for (const issue of specResult.issues || []) {
+                out(`     - ${issue}`);
+            }
+            hasIssue = true;
+        }
+    }
+
     if (hasIssue) {
         process.exitCode = 1;
     }
@@ -2554,6 +3268,25 @@ function countSkillsRecursive(dir) {
     return count;
 }
 
+function printSharedAgentTargetStatus(workspaceRoot, targetState, label) {
+    const agentDir = path.join(workspaceRoot, ".agent");
+    const agentsCount = countFilesIfExists(path.join(agentDir, "agents"), (name) => name.endsWith(".md"));
+    const workflowsCount = countFilesIfExists(path.join(agentDir, "workflows"), (name) => name.endsWith(".md"));
+    const skillsCount = countSkillsRecursive(path.join(agentDir, "skills"));
+    console.log(`\n[${label}]`);
+    console.log(`   状态: ${targetState.state}`);
+    console.log(`   路径: ${agentDir}`);
+    if (targetState.state === "installed") {
+        console.log(`   Agents: ${agentsCount}`);
+        console.log(`   Skills: ${skillsCount}`);
+        console.log(`   Workflows: ${workflowsCount}`);
+        return;
+    }
+    for (const issue of targetState.integrity.issues || []) {
+        console.log(`   Issue: ${issue}`);
+    }
+}
+
 function commandStatus(options) {
     const workspaceRoot = resolveWorkspaceRoot(options.path);
     const summary = evaluateWorkspaceState(workspaceRoot, options);
@@ -2584,22 +3317,12 @@ function commandStatus(options) {
 
     const geminiState = summary.targets.find((item) => item.targetName === "gemini");
     if (geminiState) {
-        const agentDir = path.join(workspaceRoot, ".agent");
-        const agentsCount = countFilesIfExists(path.join(agentDir, "agents"), (name) => name.endsWith(".md"));
-        const workflowsCount = countFilesIfExists(path.join(agentDir, "workflows"), (name) => name.endsWith(".md"));
-        const skillsCount = countSkillsRecursive(path.join(agentDir, "skills"));
-        console.log("\n[gemini]");
-        console.log(`   状态: ${geminiState.state}`);
-        console.log(`   路径: ${agentDir}`);
-        if (geminiState.state === "installed") {
-            console.log(`   Agents: ${agentsCount}`);
-            console.log(`   Skills: ${skillsCount}`);
-            console.log(`   Workflows: ${workflowsCount}`);
-        } else {
-            for (const issue of geminiState.integrity.issues || []) {
-                console.log(`   Issue: ${issue}`);
-            }
-        }
+        printSharedAgentTargetStatus(workspaceRoot, geminiState, "gemini");
+    }
+
+    const antigravityState = summary.targets.find((item) => item.targetName === "antigravity");
+    if (antigravityState) {
+        printSharedAgentTargetStatus(workspaceRoot, antigravityState, "antigravity");
     }
 
     const codexState = summary.targets.find((item) => item.targetName === "codex");