@mindfoldhq/trellis 0.6.4 → 0.6.6

package/dist/commands/uninstall.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"uninstall.d.ts","sourceRoot":"","sources":["../../src/commands/uninstall.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;GAiBG;AA6BH,MAAM,WAAW,gBAAgB;IAC/B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAgUD;;GAEG;AACH,wBAAsB,SAAS,CAAC,OAAO,GAAE,gBAAqB,GAAG,OAAO,CAAC,IAAI,CAAC,CAwG7E"}
+{"version":3,"file":"uninstall.d.ts","sourceRoot":"","sources":["../../src/commands/uninstall.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;GAiBG;AAmCH,MAAM,WAAW,gBAAgB;IAC/B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AA2UD;;GAEG;AACH,wBAAsB,SAAS,CAAC,OAAO,GAAE,gBAAqB,GAAG,OAAO,CAAC,IAAI,CAAC,CAwG7E"}

package/dist/commands/uninstall.js

@@ -27,7 +27,8 @@ import { cleanupEmptyDirs } from "./update.js";
 import { ALL_MANAGED_DIRS, getConfiguredPlatforms, } from "../configurators/index.js";
 import { pruneOrphanManifestKeys } from "../utils/manifest-prune.js";
 import { isCwdHomedir, homedirGuardMessage, homedirBypassEnabled, } from "../utils/cwd-guard.js";
-import { scrubHooksJson, scrubOpencodePackageJson, scrubPiSettings, scrubCodexConfigToml, } from "../utils/uninstall-scrubbers.js";
+import { scrubHooksJson, scrubOpencodePackageJson, scrubPiSettings, scrubCodexConfigToml, scrubManagedMarkdownBlock, } from "../utils/uninstall-scrubbers.js";
+import { COPILOT_INSTRUCTIONS_BLOCK_END, COPILOT_INSTRUCTIONS_BLOCK_START, COPILOT_INSTRUCTIONS_PATH, } from "../templates/copilot/index.js";
 /**
  * Build the dispatch table for structured config scrubbers.
  *
@@ -43,6 +44,7 @@ function buildStructuredFileSpecs() {
             ".codebuddy/settings.json",
             ".qoder/settings.json",
             ".codex/hooks.json",
+            ".trae/hooks.json",
         ].map((p) => ({
             posixPath: p,
             reason: "Strip trellis hooks; preserve user fields",
@@ -69,6 +71,11 @@ function buildStructuredFileSpecs() {
             reason: "Remove trellis project_doc_fallback_filenames and notes",
             scrub: (content) => scrubCodexConfigToml(content),
         },
+        {
+            posixPath: COPILOT_INSTRUCTIONS_PATH,
+            reason: "Remove Trellis Copilot guidance; preserve repo instructions",
+            scrub: (content) => scrubManagedMarkdownBlock(content, COPILOT_INSTRUCTIONS_BLOCK_START, COPILOT_INSTRUCTIONS_BLOCK_END),
+        },
     ];
     const map = new Map();
     for (const spec of specs) {

package/dist/commands/uninstall.js.map

@@ -1 +1 @@
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package/dist/commands/update.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"update.d.ts","sourceRoot":"","sources":["../../src/commands/update.ts"],"names":[],"mappings":"AAeA,OAAO,KAAK,EACV,kBAAkB,EAClB,aAAa,EAKd,MAAM,uBAAuB,CAAC;AAoD/B,MAAM,WAAW,aAAa;IAC5B,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,cAAc,CAAC,EAAE,OAAO,CAAC;IACzB,OAAO,CAAC,EAAE,OAAO,CAAC;CACnB;AAwXD;;;;;;;;;;GAUG;AACH,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,EAAE,CA6DzD;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAgB,oBAAoB,CAClC,QAAQ,EAAE,MAAM,EAChB,cAAc,EAAE,MAAM,GACrB,MAAM,GAAG,IAAI,CA2Bf;AAED;;;;;;;;;GASG;AACH,wBAAgB,wBAAwB,CACtC,OAAO,EAAE,kBAAkB,EAAE,EAC7B,GAAG,EAAE,MAAM,EACX,gBAAgB,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,GACpC;IAAE,QAAQ,EAAE,MAAM,CAAA;CAAE,CA0CtB;AA0kBD;;;GAGG;AACH,wBAAgB,uBAAuB,CAAC,YAAY,EAAE,MAAM,GAAG,OAAO,CAerE;AA6bD;;;GAGG;AACH,0CAA0C;AAC1C,wBAAgB,gBAAgB,CAAC,GAAG,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,GAAG,IAAI,CAgCnE;AAED;;;;GAIG;AACH,0CAA0C;AAC1C,wBAAgB,0BAA0B,CACxC,UAAU,EAAE,aAAa,EAAE,GAC1B,aAAa,EAAE,CAajB;AAuMD;;GAEG;AACH,wBAAsB,MAAM,CAAC,OAAO,EAAE,aAAa,GAAG,OAAO,CAAC,IAAI,CAAC,CAizBlE"}

package/dist/commands/update.js

@@ -16,6 +16,7 @@ import { getAllScripts, getAllAgents,
 // Configuration
 configYamlTemplate, gitignoreTemplate, workflowMdTemplate, } from "../templates/trellis/index.js";
 import { agentsMdContent } from "../templates/markdown/index.js";
+import { COPILOT_INSTRUCTIONS_BLOCK_END, COPILOT_INSTRUCTIONS_BLOCK_START, COPILOT_INSTRUCTIONS_PATH, getCopilotInstructions, } from "../templates/copilot/index.js";
 import { ALL_MANAGED_DIRS, getConfiguredPlatforms, collectPlatformTemplates, isManagedPath, isManagedRootDir, } from "../configurators/index.js";
 import { replacePythonCommandLiterals } from "../configurators/shared.js";
 import { pruneOrphanManifestKeys } from "../utils/manifest-prune.js";
@@ -40,57 +41,63 @@ const PROTECTED_PATHS = [
     `${DIR_NAMES.WORKFLOW}/.developer`,
     `${DIR_NAMES.WORKFLOW}/.current-task`,
 ];
-function getTrellisManagedBlock(content) {
-    const start = content.indexOf(TRELLIS_BLOCK_START);
+function getManagedBlock(content, startMarker, endMarker) {
+    const start = content.indexOf(startMarker);
     if (start === -1) {
         return null;
     }
-    const end = content.indexOf(TRELLIS_BLOCK_END, start);
+    const end = content.indexOf(endMarker, start);
     if (end === -1) {
         return null;
     }
-    return content.slice(start, end + TRELLIS_BLOCK_END.length);
+    return content.slice(start, end + endMarker.length);
+}
+function getTrellisManagedBlock(content) {
+    return getManagedBlock(content, TRELLIS_BLOCK_START, TRELLIS_BLOCK_END);
 }
-function replaceTrellisManagedBlock(existingContent, templateContent) {
-    const existingStart = existingContent.indexOf(TRELLIS_BLOCK_START);
+function replaceManagedBlock(existingContent, templateContent, startMarker, endMarker) {
+    const existingStart = existingContent.indexOf(startMarker);
     if (existingStart === -1) {
         return null;
     }
-    const existingEnd = existingContent.indexOf(TRELLIS_BLOCK_END, existingStart);
+    const existingEnd = existingContent.indexOf(endMarker, existingStart);
     if (existingEnd === -1) {
         return null;
     }
-    const templateBlock = getTrellisManagedBlock(templateContent);
+    const templateBlock = getManagedBlock(templateContent, startMarker, endMarker);
     if (!templateBlock) {
         return null;
     }
     return (existingContent.slice(0, existingStart) +
         templateBlock +
-        existingContent.slice(existingEnd + TRELLIS_BLOCK_END.length));
+        existingContent.slice(existingEnd + endMarker.length));
 }
-function buildAgentsMdTemplate(cwd) {
-    const fullPath = path.join(cwd, FILE_NAMES.AGENTS);
-    if (!fs.existsSync(fullPath)) {
-        return agentsMdContent;
-    }
-    const existingContent = fs.readFileSync(fullPath, "utf-8");
-    // Existing file already has TRELLIS:START/END markers — replace just the
-    // managed block, preserving everything outside it.
-    const replaced = replaceTrellisManagedBlock(existingContent, agentsMdContent);
+function mergeManagedBlockContent(existingContent, templateContent, startMarker, endMarker) {
+    const replaced = replaceManagedBlock(existingContent, templateContent, startMarker, endMarker);
     if (replaced !== null) {
         return replaced;
     }
-    // Existing file has no managed-block markers (pre-0.5.0-beta.18 project, or
-    // user hand-wrote AGENTS.md without ever running through Trellis). Append
-    // the template's managed block at the end so user content is preserved
-    // instead of clobbered.
-    const templateBlock = getTrellisManagedBlock(agentsMdContent);
+    const templateBlock = getManagedBlock(templateContent, startMarker, endMarker);
     if (!templateBlock) {
-        return agentsMdContent;
+        return templateContent;
     }
     const trimmed = existingContent.replace(/\s+$/, "");
     return `${trimmed}\n\n${templateBlock}\n`;
 }
+function buildManagedBlockTemplate(cwd, relativePath, templateContent, startMarker, endMarker) {
+    const fullPath = path.join(cwd, ...relativePath.split("/"));
+    if (!fs.existsSync(fullPath)) {
+        return templateContent;
+    }
+    const existingContent = fs.readFileSync(fullPath, "utf-8");
+    return mergeManagedBlockContent(existingContent, templateContent, startMarker, endMarker);
+}
+function buildAgentsMdTemplate(cwd) {
+    return buildManagedBlockTemplate(cwd, FILE_NAMES.AGENTS, agentsMdContent, TRELLIS_BLOCK_START, TRELLIS_BLOCK_END);
+}
+function buildCopilotInstructionsTemplate(cwd) {
+    return buildManagedBlockTemplate(cwd, COPILOT_INSTRUCTIONS_PATH, getCopilotInstructions(), COPILOT_INSTRUCTIONS_BLOCK_START, COPILOT_INSTRUCTIONS_BLOCK_END);
+}
 function isKnownUntrackedTemplate(relativePath, existingContent) {
     if (relativePath !== FILE_NAMES.AGENTS) {
         return false;
@@ -101,6 +108,15 @@ function isKnownUntrackedTemplate(relativePath, existingContent) {
     }
     return LEGACY_UNTRACKED_AGENTS_MD_BLOCK_HASHES.has(computeHash(managedBlock));
 }
+function isSafeUntrackedCopilotInstructionsMerge(relativePath, existingContent, newContent) {
+    if (relativePath !== COPILOT_INSTRUCTIONS_PATH) {
+        return false;
+    }
+    if (getManagedBlock(existingContent, COPILOT_INSTRUCTIONS_BLOCK_START, COPILOT_INSTRUCTIONS_BLOCK_END)) {
+        return false;
+    }
+    return (mergeManagedBlockContent(existingContent, getCopilotInstructions(), COPILOT_INSTRUCTIONS_BLOCK_START, COPILOT_INSTRUCTIONS_BLOCK_END) === newContent);
+}
 /**
  * Check if a path is blocked by PROTECTED_PATHS
  */
@@ -396,18 +412,30 @@ function needsCodexUpgrade(cwd) {
     if (fs.existsSync(path.join(cwd, ".codex"))) {
         return false;
     }
-    // Codex-only marker: legacy Codex installs always tracked the
-    // command-as-skill files `trellis-continue/SKILL.md` and
-    // `trellis-finish-work/SKILL.md` under `.agents/skills/`. Other platforms
-    // that share `.agents/skills/` (e.g. Gemini CLI 0.40+ via the workspace
-    // alias — issue #224) only write shared common skills and never these two
-    // command files, so their presence in the hash file is a reliable signal
-    // that the project was originally configured with Codex before `.codex/`
-    // existed as a separate config dir.
+    // Legacy Codex marker: old Codex installs tracked command-as-skill files
+    // under `.agents/skills/` before `.codex/` existed as a separate config dir.
+    // A current or future non-Codex platform may own those paths too, so do not
+    // trigger the Codex backfill when a configured non-Codex platform declares
+    // the marker paths in its templates.
     const hashes = loadHashes(cwd);
-    const keys = Object.keys(hashes);
-    return (keys.some((key) => key === ".agents/skills/trellis-continue/SKILL.md") ||
-        keys.some((key) => key === ".agents/skills/trellis-finish-work/SKILL.md"));
+    const legacyMarkers = [
+        ".agents/skills/trellis-continue/SKILL.md",
+        ".agents/skills/trellis-finish-work/SKILL.md",
+    ];
+    const hasLegacyMarker = legacyMarkers.some((key) => hashes[key] !== undefined);
+    if (!hasLegacyMarker) {
+        return false;
+    }
+    for (const platformId of getConfiguredPlatforms(cwd)) {
+        if (platformId === "codex") {
+            continue;
+        }
+        const platformFiles = collectPlatformTemplates(platformId);
+        if (platformFiles && legacyMarkers.some((key) => platformFiles.has(key))) {
+            return false;
+        }
+    }
+    return true;
 }
 function preserveExistingClaudeStatusLine(cwd, templates) {
     const newSettingsContent = templates.get(CLAUDE_SETTINGS_PATH);
@@ -545,6 +573,9 @@ bypassUpdateSkip = false) {
             for (const [filePath, content] of platformFiles) {
                 files.set(filePath, content);
             }
+            if (platformId === "copilot") {
+                files.set(COPILOT_INSTRUCTIONS_PATH, buildCopilotInstructionsTemplate(cwd));
+            }
         }
     }
     preserveExistingClaudeStatusLine(cwd, files);
@@ -619,7 +650,9 @@ function analyzeChanges(cwd, hashes, templates) {
                 const currentHash = computeHash(existingContent);
                 if ((storedHash && storedHash === currentHash) ||
                     (!storedHash &&
-                        isKnownUntrackedTemplate(relativePath, existingContent))) {
+                        isKnownUntrackedTemplate(relativePath, existingContent)) ||
+                    (!storedHash &&
+                        isSafeUntrackedCopilotInstructionsMerge(relativePath, existingContent, newContent))) {
                     // Either the tracked hash matches, or this is a known pristine template
                     // from before the path was hash-tracked. Safe to auto-update.
                     change.status = "changed";
@@ -636,10 +669,11 @@ function analyzeChanges(cwd, hashes, templates) {
     }
     return result;
 }
-function collectMissingAgentsMdHash(changes, hashes) {
+function collectMissingManagedFileHashes(changes, hashes) {
     const files = new Map();
+    const managedFiles = new Set([FILE_NAMES.AGENTS, COPILOT_INSTRUCTIONS_PATH]);
     for (const file of changes.unchangedFiles) {
-        if (file.relativePath === FILE_NAMES.AGENTS && !hashes[file.relativePath]) {
+        if (managedFiles.has(file.relativePath) && !hashes[file.relativePath]) {
             files.set(file.relativePath, file.newContent);
         }
     }
@@ -900,6 +934,13 @@ async function getLatestNpmVersion() {
 function collectAllFiles(dirPath, cwd = process.cwd()) {
     if (!fs.existsSync(dirPath))
         return [];
+    const rootStat = fs.statSync(dirPath);
+    if (rootStat.isFile()) {
+        return [dirPath];
+    }
+    if (!rootStat.isDirectory()) {
+        return [];
+    }
     const files = [];
     const stack = [dirPath];
     while (stack.length > 0) {
@@ -1611,7 +1652,7 @@ export async function update(options) {
     }
     // Analyze changes (pass hashes for modification detection)
     const changes = analyzeChanges(cwd, hashes, templates);
-    const missingAgentsMdHash = collectMissingAgentsMdHash(changes, hashes);
+    const missingManagedFileHashes = collectMissingManagedFileHashes(changes, hashes);
     // Print summary
     printChangeSummary(changes);
     // First-time hash tracking hint
@@ -1634,8 +1675,8 @@ export async function update(options) {
         changes.changedFiles.length === 0 &&
         !hasPendingMigrations &&
         !hasSafeDeletes) {
-        if (!options.dryRun && missingAgentsMdHash.size > 0) {
-            updateHashes(cwd, missingAgentsMdHash);
+        if (!options.dryRun && missingManagedFileHashes.size > 0) {
+            updateHashes(cwd, missingManagedFileHashes);
         }
         if (isSameVersion) {
             console.log(chalk.green("✓ Already up to date!"));
@@ -1839,7 +1880,7 @@ export async function update(options) {
     // Update version file
     updateVersionFile(cwd);
     // Update template hashes for new, auto-updated, and overwritten files
-    const filesToHash = new Map(missingAgentsMdHash);
+    const filesToHash = new Map(missingManagedFileHashes);
     for (const file of changes.newFiles) {
         filesToHash.set(file.relativePath, file.newContent);
     }