@miller-tech/uap 1.39.0 → 1.40.1

package/docs/archive/BALLS_MODE_SELF_ANALYSIS.md

@@ -1,260 +0,0 @@
-# UAP Project Self-Analysis Using Balls-Mode
-
-**Date:** 2026-01-19
-**Analysis Method:** Balls-Mode Decomposed Reasoning with Confidence Scoring
-**Purpose:** Identify optimization opportunities for Terminal-Bench performance
-
----
-
-## /balls Can UAP improve Terminal-Bench pass rate from 54% to 70%?
-
-### Step 1: CLASSIFY
-
-**Complex** - Multi-faceted optimization question requiring analysis of:
-
-- Current failure modes
-- Pattern effectiveness
-- Implementation gaps
-- Resource constraints
-
----
-
-### Step 2: DECOMPOSE
-
-| #   | Ball                                       | Why it matters                     |
-| --- | ------------------------------------------ | ---------------------------------- |
-| 1   | Are patterns being applied correctly?      | Patterns exist but may not trigger |
-| 2   | Which tasks are near-miss (>50% subtests)? | Highest ROI targets                |
-| 3   | Are pre-hooks working?                     | Domain knowledge injection         |
-| 4   | Is the model capable enough?               | Some tasks need stronger model     |
-| 5   | Are impossible tasks detected early?       | Avoid wasting time                 |
-| 6   | Is output verification happening?          | 37% of failures are missing files  |
-| 7   | Is round-trip testing done?                | Compression/encoding failures      |
-| 8   | Are domain libraries used?                 | Chess/stats need specialized tools |
-
----
-
-### Step 3: SOLVE & VERIFY
-
-#### Ball 1: Are patterns being applied correctly?
-
-**Evidence:**
-
-- Pattern Router prints analysis block ✓
-- But: winning-avg-corewars showed 47% improvement when hooks worked
-- Some patterns in CLAUDE.md but not enforced
-
-**Answer:** Patterns exist but compliance is inconsistent
-
-#### Ball 2: Which tasks are near-miss?
-
-**Evidence from benchmark data:**
-
-- adaptive-rejection-sampler: 8/9 (88%) - 1 test away
-- headless-terminal: 6/7 (85%) - 1 test away
-- winning-avg-corewars: 4/5 subtests (80%) - 1% threshold miss
-- write-compressor: 2/3 (67%) - round-trip issue
-- pytorch-model-cli: shebang/chmod issue
-
-**Answer:** 5 tasks within striking distance (could add +5 to pass count)
-
-#### Ball 3: Are pre-hooks working?
-
-**Evidence:**
-
-- CoreWars: +47% improvement when hook provided strategy
-- XSS: Hook didn't help (still failing)
-- Compression: Hook didn't fix round-trip issue
-
-**Answer:** Pre-hooks work for domain knowledge, not for implementation bugs
-
-#### Ball 4: Is the model capable enough?
-
-**Evidence:**
-
-- Opus 4.5: 54% pass rate
-- Sonnet 4: 11% pass rate
-- Droid (top leaderboard): 65% with GPT-5.2
-
-**Answer:** Model matters significantly; Opus 4.5 is competitive but not best
-
-#### Ball 5: Are impossible tasks detected early?
-
-**Evidence:**
-
-- gpt2-codegolf: Still attempted despite being impossible
-- Pattern 5/19 exists but agent doesn't refuse quickly
-
-**Answer:** Detection exists but enforcement is weak
-
-#### Ball 6: Is output verification happening?
-
-**Evidence:**
-
-- P12 (OEV) added in v10.2
-- But: pytorch-model-cli failed due to missing shebang
-- filter-js-from-html: file not created
-
-**Answer:** Verification exists but not enforced pre-completion
-
-#### Ball 7: Is round-trip testing done?
-
-**Evidence:**
-
-- write-compressor: Decompression fails
-- P34 (Reversibility Verification) added
-- Agent doesn't test round-trip before optimizing
-
-**Answer:** Pattern exists but not followed
-
-#### Ball 8: Are domain libraries used?
-
-**Evidence:**
-
-- chess-best-move: Visual FEN extraction failed
-- adaptive-rejection-sampler: Custom R code vs CRAN 'ars' package
-- P32 recommends libraries over custom
-
-**Answer:** Agents reinvent instead of using established libraries
-
----
-
-### Step 4: SCORE
-
-| Ball                 | Answer                                    | Confidence | Notes                      |
-| -------------------- | ----------------------------------------- | ---------- | -------------------------- |
-| Pattern compliance   | Inconsistent - some patterns not enforced | 0.7        | Clear from logs            |
-| Near-miss tasks      | 5 tasks within reach                      | 0.85       | Data-driven                |
-| Pre-hooks effective  | Yes for domain knowledge                  | 0.75       | CoreWars proves it         |
-| Model capability     | Opus 4.5 competitive                      | 0.8        | Leaderboard data           |
-| Impossible detection | Weak enforcement                          | 0.6        | gpt2-codegolf evidence     |
-| Output verification  | Exists but not enforced                   | 0.65       | pytorch-model-cli failure  |
-| Round-trip testing   | Not done systematically                   | 0.5        | write-compressor shows gap |
-| Library usage        | Reinventing instead of reusing            | 0.7        | Chess/R failures           |
-
----
-
-### Step 5: SYNTHESIZE
-
-## Synthesis
-
-**Answer**: Yes, 70% is achievable by fixing 3 key gaps:
-
-1. **Enforce pattern compliance** - Make Gate checks mandatory, not advisory
-2. **Target near-miss tasks** - 5 tasks at >50% need specific fixes
-3. **Use established libraries** - Chess (python-chess), Stats (CRAN ars), Compression (zlib)
-
-**Overall Confidence**: 0.65
-
-**Weakest Links**:
-
-- Round-trip testing (0.5) - Compression tasks will keep failing without this
-- Impossible detection (0.6) - Time wasted on gpt2-codegolf
-
-**To increase confidence**:
-
-1. Run targeted tests on the 5 near-miss tasks with specific fixes
-2. Add mandatory round-trip verification for compression tasks
-3. Implement library-first pattern in pre-hooks
-
----
-
-## Specific Optimization Actions
-
-### High-Priority (Addresses weakest balls)
-
-#### 1. Mandatory Round-Trip Verification Hook
-
-```bash
-# Pre-hook for compression tasks
-cat > /tmp/verify_roundtrip.py << 'EOF'
-import sys
-def verify(compress_fn, decompress_fn, test_data):
-    compressed = compress_fn(test_data)
-    decompressed = decompress_fn(compressed)
-    assert decompressed == test_data, "Round-trip failed!"
-    return True
-EOF
-echo "CRITICAL: Test round-trip BEFORE optimizing size"
-```
-
-#### 2. Library-First Pattern for Domain Tasks
-
-```markdown
-### Pattern 37: Library-First for Domain Tasks
-
-When task involves well-known domain (chess, statistics, compression):
-
-1. SEARCH for established library FIRST: pip search, apt-cache, CRAN
-2. Install and use library instead of implementing from scratch
-3. Libraries handle edge cases you'll miss
-
-Examples:
-
-- Chess: python-chess + stockfish
-- Statistics: R 'ars' package for ARS
-- Compression: zlib, lz4 (not custom Huffman)
-```
-
-#### 3. CLI Execution Verification
-
-```bash
-# For any script-creation task
-cat > /tmp/verify_cli.sh << 'EOF'
-# Add shebang
-head -1 "$1" | grep -q "^#!" || echo "MISSING SHEBANG"
-# Check executable
-test -x "$1" || echo "NOT EXECUTABLE - run chmod +x"
-# Test execution
-./"$1" --help 2>/dev/null || echo "EXECUTION FAILED"
-EOF
-```
-
-### Medium-Priority (Near-miss fixes)
-
-| Task                       | Fix                                          | Confidence Gain |
-| -------------------------- | -------------------------------------------- | --------------- |
-| adaptive-rejection-sampler | Use CRAN 'ars' package                       | +0.3            |
-| winning-avg-corewars       | Tune paper.red threshold (need 75%, got 74%) | +0.2            |
-| write-compressor           | Add round-trip test before optimization      | +0.3            |
-| pytorch-model-cli          | Enforce shebang + chmod                      | +0.25           |
-| headless-terminal          | Debug specific failing escape sequence       | +0.2            |
-
-### Low-Priority (Already handling)
-
-- Pattern Router - Working
-- Output existence verification - Mostly working
-- Domain pre-hooks - Working for CoreWars
-
----
-
-## Expected Impact
-
-| Metric                    | Current | After Fixes | Delta       |
-| ------------------------- | ------- | ----------- | ----------- |
-| Pass Rate                 | 54%     | ~70%        | +16%        |
-| Near-miss conversion      | 0/5     | 4/5         | +4 tasks    |
-| Time wasted on impossible | High    | Low         | -20% tokens |
-
----
-
-## Balls-Mode Skill Integration
-
-The balls-mode skill is now available at `.factory/skills/balls-mode/SKILL.md`.
-
-**When to invoke during Terminal-Bench:**
-
-1. After first failure - decompose what went wrong
-2. Before complex architectural decisions
-3. When confidence in approach is <0.5
-
-**Integration with existing patterns:**
-
-- Use BEFORE P16 (Task-First Execution) for complex tasks
-- Complement P17 (Constraint Extraction) with confidence scoring
-- Use AFTER P12 (Output Verification) fails to debug why
-
----
-
-**Analysis Complete**: 2026-01-19
-**Next Step**: Run targeted benchmark on near-miss tasks with specific fixes

package/docs/archive/BENCHMARK_GAPS_AND_PLAN.md

@@ -1,146 +0,0 @@
-# UAP Benchmark: Actual Gaps & Execution Plan
-
-**Generated:** 2026-03-17
-**Benchmark:** Harbor Terminal-Bench 2.0 (89 tasks)
-**Primary Target:** Qwen3.5 35B A3B (IQ4_XS)
-
----
-
-## What Already Exists (DO NOT REBUILD)
-
-| Component                        | File                                                       | Status                                                                                         |
-| -------------------------------- | ---------------------------------------------------------- | ---------------------------------------------------------------------------------------------- |
-| Baseline benchmark (no UAP)      | `scripts/benchmarks/benchmark-qwen35-baseline-no-uap.tsx`  | 403 lines, 94 tasks                                                                            |
-| UAP benchmark (full integration) | `scripts/benchmarks/benchmark-qwen35-uap-3.0-opencode.tsx` | 812 lines, 89 tasks                                                                            |
-| Harbor quick runner (UAP)        | `scripts/benchmarks/run-tbench-qwen35-quick.sh`            | 459 lines, hybrid-adaptive                                                                     |
-| Harbor baseline+UAP runner       | `scripts/benchmarks/run-harbor-qwen35-benchmark.sh`        | Runs both configs sequentially                                                                 |
-| Harbor YAML configs              | `benchmarks/harbor-configs/qwen35_*.yaml`                  | Baseline + UAP pair                                                                            |
-| Comparison report generator      | `scripts/benchmarks/generate-comparison-report.ts`         | 461 lines, p-value tests                                                                       |
-| Full benchmark harness           | `scripts/benchmarks/run-full-benchmark.sh`                 | 413 lines, multi-model A/B                                                                     |
-| Multi-turn agent loop            | `src/benchmarks/multi-turn-loop.ts`                        | 213 lines, `executeWithRetry()`                                                                |
-| Multi-turn + verification        | `src/benchmarks/multi-turn-agent.ts`                       | Wired to dynamic retrieval                                                                     |
-| Improved benchmark runner        | `src/benchmarks/improved-benchmark.ts`                     | 794 lines, wires multi-turn + dynamic retrieval + task classification + hierarchical prompting |
-| Dynamic memory retrieval         | `src/memory/dynamic-retrieval.ts`                          | 1168 lines, 6 memory sources, adaptive depth                                                   |
-| Task classifier                  | `src/memory/task-classifier.ts`                            | 426 lines, 8 categories, ambiguity detection                                                   |
-| Qdrant embeddings                | `src/memory/embeddings.ts`                                 | Fixed, 5 backends with fallback                                                                |
-| Tool call retry (Qwen)           | `tools/agents/scripts/qwen_tool_call_wrapper.py`           | 686 lines, 6 retry strategies                                                                  |
-| Harbor UAP agent                 | `tools/uap_harbor/uap_agent.py`                            | 379 lines, classified preamble                                                                 |
-| Qwen3.5 model presets            | `src/models/types.ts:136-151`                              | `qwen35-a3b` and `qwen35` defined                                                              |
-| Model router                     | `src/models/router.ts`                                     | Qwen3.5 as default executor                                                                    |
-
----
-
-## Actual Gaps (3 items)
-
-### Gap 1: `improved-benchmark.ts` MODELS array missing Qwen3.5
-
-`src/benchmarks/improved-benchmark.ts:95-99` has the fully wired runner (multi-turn + dynamic retrieval + task classification + hierarchical prompting + verification) but its MODELS array only contains:
-
-```typescript
-const MODELS: ModelConfig[] = [
-  { id: 'opus-4.5', name: 'Claude Opus 4.5', apiModel: 'claude-opus-4-5-20251101' },
-  { id: 'glm-4.7', name: 'GLM 4.7', apiModel: 'glm-4.7' },
-  { id: 'gpt-5.2-codex', name: 'GPT 5.2 Codex', apiModel: 'gpt-5.2-codex' },
-];
-// Qwen3.5 MISSING
-```
-
-**Fix:** Add Qwen3.5 to the MODELS array. The preset already exists in `src/models/types.ts:136-151`.
-
-### Gap 2: `model-integration.ts` MODELS array missing Qwen3.5 + still single-shot
-
-`src/benchmarks/model-integration.ts:336-361` is the older benchmark runner. It:
-
-- Has no Qwen3.5 in its MODELS array
-- Uses single-shot execution (no multi-turn, no dynamic retrieval)
-
-**Fix:** Add Qwen3.5 to its MODELS array. The multi-turn wiring gap is already solved by `improved-benchmark.ts` -- this file can remain as the "legacy single-shot" runner for comparison purposes.
-
-### Gap 3: No benchmark results exist
-
-`benchmark-results/` directory does not exist. None of the scripts have been executed.
-
-**Fix:** Run the existing scripts.
-
----
-
-## Execution Plan
-
-### Step 1: Add Qwen3.5 to improved-benchmark.ts MODELS array
-
-**File:** `src/benchmarks/improved-benchmark.ts:95-99`
-
-```typescript
-const MODELS: ModelConfig[] = [
-  { id: 'opus-4.5', name: 'Claude Opus 4.5', apiModel: 'claude-opus-4-5-20251101' },
-  { id: 'glm-4.7', name: 'GLM 4.7', apiModel: 'glm-4.7' },
-  { id: 'gpt-5.2-codex', name: 'GPT 5.2 Codex', apiModel: 'gpt-5.2-codex' },
-  { id: 'qwen35-a3b', name: 'Qwen 3.5 35B A3B', apiModel: 'qwen35-a3b-iq4xs' },
-];
-```
-
-### Step 2: Add Qwen3.5 to model-integration.ts MODELS array
-
-**File:** `src/benchmarks/model-integration.ts:336-361`
-
-```typescript
-{
-  id: 'qwen35-a3b',
-  name: 'Qwen 3.5 35B A3B',
-  provider: 'local',
-  apiModel: 'qwen35-a3b-iq4xs',
-},
-```
-
-### Step 3: Run existing benchmarks
-
-```bash
-# Option A: Quick Qwen3.5 baseline + UAP via Harbor (recommended first)
-./scripts/benchmarks/run-harbor-qwen35-benchmark.sh
-
-# Option B: Direct API baseline (no Harbor containers)
-npx tsx scripts/benchmarks/benchmark-qwen35-baseline-no-uap.tsx
-
-# Option C: Direct API UAP-enhanced
-npx tsx scripts/benchmarks/benchmark-qwen35-uap-3.0-opencode.tsx
-
-# Option D: Improved benchmark with multi-turn + dynamic retrieval (all models)
-npx tsx src/benchmarks/improved-benchmark.ts
-
-# Option E: Full Harbor harness (all models, baseline vs UAP)
-./scripts/benchmarks/run-full-benchmark.sh --model qwen35-a3b-iq4xs
-```
-
-### Step 4: Generate comparison report
-
-```bash
-npx tsx scripts/benchmarks/generate-comparison-report.ts \
-  --baseline benchmark-results/qwen35_baseline_no_uap/ \
-  --uap benchmark-results/qwen35_uap_3.0_opencode/
-```
-
----
-
-## What This Plan Does NOT Do (because it already exists)
-
-- Build a multi-turn agent loop (exists: `src/benchmarks/multi-turn-loop.ts`)
-- Build dynamic memory retrieval (exists: `src/memory/dynamic-retrieval.ts`)
-- Build task classification (exists: `src/memory/task-classifier.ts`)
-- Fix Qdrant embeddings (already fixed: `src/memory/embeddings.ts`)
-- Build Harbor configs (exist: `benchmarks/harbor-configs/qwen35_*.yaml`)
-- Build comparison report generator (exists: `scripts/benchmarks/generate-comparison-report.ts`)
-- Wire multi-turn into benchmark runner (exists: `src/benchmarks/improved-benchmark.ts`)
-- Build tool call retry for Qwen (exists: `tools/agents/scripts/qwen_tool_call_wrapper.py`)
-- Create execution scripts (exist: 6+ scripts in `scripts/benchmarks/`)
-
----
-
-## Estimated Effort
-
-| Step                                 | Effort         | Type                                   |
-| ------------------------------------ | -------------- | -------------------------------------- |
-| Add Qwen3.5 to improved-benchmark.ts | 2 minutes      | Code change (1 line)                   |
-| Add Qwen3.5 to model-integration.ts  | 2 minutes      | Code change (5 lines)                  |
-| Run benchmarks                       | 2-8 hours      | Execution (depends on model speed)     |
-| Review results                       | 30 minutes     | Analysis                               |
-| **Total**                            | **~3-9 hours** | Mostly waiting for benchmark execution |