@milehimikey/em 1.10.0 → 1.11.0

package/dist/cli/status.d.ts

@@ -91,6 +91,11 @@ export interface ConformanceEntry {
      *  `resolveConformanceEntry` below): a bare "opted out of computing this" state doesn't occur
      *  on the real CLI/MCP call paths, which always supply `sliceDocFacts`. */
     slicePRsBehindHead: number | null;
+    /** MIL-202: whether this model's implementation constitution exists, and where it's expected
+     *  — existence only. `em` never reads or validates the document's content (no LLM, nothing
+     *  parsed): the whole fact is "is the house-rules document there or not". See
+     *  `resolveConstitution` for the two-shape resolution rule. */
+    constitution: ConstitutionEntry;
     /** Set when the state file exists and parses, but git couldn't answer commits-behind-HEAD or
      *  slice-PRs-behind-HEAD (not a git repo, unknown revision, ...) — reported per-model rather
      *  than aborting the whole rollup, since `em status` is a soft report, not a gate. Also carries
@@ -98,6 +103,37 @@ export interface ConformanceEntry {
      *  treatment. */
     error: string | null;
 }
+/** Where the project's implementation constitution is, and whether it's there. `path` is always
+ *  the EXPECTED location — set whether or not the file exists — expressed **relative to the
+ *  entry's own `modelDir`**, always with `/` separators, so the JSON document stays
+ *  machine-independent (never an absolute path, never a Windows separator). `join(modelDir,
+ *  path)` reconstructs the real location. Typed `string | null` for the ruling's shape; on every
+ *  real call path (`resolveConstitution` below) it is non-null, since the expected location is
+ *  always computable from `modelDir` alone. */
+export interface ConstitutionEntry {
+    present: boolean;
+    path: string | null;
+}
+/** Walk up from `startDir` looking for a `.specify/` directory — the same "is this a spec-kit
+ *  project, and where is its root" walk `em-sdd-bridge`'s `findRepoRoot` does (and spec-kit's own
+ *  `find_specify_root`). Returns the directory CONTAINING `.specify/`, or null at the filesystem
+ *  root. Directory existence only; nothing inside `.specify/` is read. */
+export declare function findSpecifyRoot(startDir: string): string | null;
+/**
+ * Resolve one model's implementation constitution (MIL-202). Two project shapes, one document —
+ * em never writes or expects a second copy:
+ *
+ *  - **spec-kit project** (a `.specify/` directory exists at or above `modelDir`): the document
+ *    IS `<root>/.specify/memory/constitution.md`, spec-kit's own slot. em defers to it.
+ *  - **anything else**: `<modelDir>/constitution.md`, beside the model — what `em scaffold`
+ *    writes.
+ *
+ * Existence only: this never opens the file, so a blank stock template and a fully answered,
+ * ratified constitution are indistinguishable here by design (content judgment is a human's, and
+ * `em`'s core stays deterministic and LLM-free). The advisory "is it still an unfilled template"
+ * check belongs to the SDD bridge, not here.
+ */
+export declare function resolveConstitution(modelDir: string): ConstitutionEntry;
 /**
  * `git rev-list --count <revision>..HEAD` in `repo` (any directory inside it, not necessarily
  * its root — same "anchor dir, resolve toplevel" convention `conformScope.ts`'s
@@ -142,9 +178,10 @@ export declare function resolveSlicePRsBehindHead(repo: string, revision: string
  * per-model namespacing), but its `Model file:` bullet names exactly ONE of them — so a sibling
  * file it does NOT describe (the common case: a `conform-scope --seed-asis` scratch copy like
  * `checkout-asis.em` sitting next to `checkout.em`) must not inherit `checkout.em`'s conformance
- * record just because it lives in the same directory. When `Model file:` is set and doesn't match
- * `basename(file)`, the record is reported as unattributed (via `error`, the same non-fatal
- * channel a git failure uses) rather than silently misattributed.
+ * record just because it lives in the same directory. `stateFile.ts`'s `modelPathMismatch` (the
+ * one check both this function and `em conform-scope`, MIL-179, run) reports that case: the
+ * record comes back unattributed (via `error`, the same non-fatal channel a git failure uses)
+ * rather than silently misattributed.
  */
 export declare function resolveConformanceEntry(file: string, repoOverride: string | undefined, sliceDocFacts: SliceDocFacts[], runGit?: GitRunner): ConformanceEntry;
 export interface StatusSliceCounts {
@@ -238,6 +275,10 @@ export declare function aggregateInvariantTotals(testsDir: string, reports: Cove
 /** Exported for `em freshness` (freshness.ts, MIL-164) — the standalone surface for exactly
  *  this one clause, without pulling in the rest of `em status`'s rollup. */
 export declare function formatConformancePart(entry: ConformanceEntry): string;
+/** MIL-202: the per-model constitution clause — `present`, or `absent (<expected path>)` with
+ *  the path the entry already resolved (relative to that model's own directory). Shared by the
+ *  text and markdown reports so the two can't drift. Existence only; never a content judgment. */
+export declare function formatConstitutionPart(entry: ConformanceEntry): string;
 /** The one-line rollup: `"8/8 implemented · 20/20 invariants covered · 0 open issues · last
  *  conformed <rev>, N commits behind HEAD"` (MIL-163's acceptance line). For multiple input
  *  models, the conformance clause reports the FIRST file's entry — a single-file invocation is

package/dist/cli/status.js

@@ -21,11 +21,12 @@
 // Deterministic core: no LLM calls, no wall-clock timestamps in the output, byte-stable for the
 // same inputs. Text/markdown/badge are formatting layers over one aggregated StatusReport; the
 // JSON document (emit/statusJson.ts) is a versioned envelope around the exact same object.
-import { basename, dirname, resolve } from "node:path";
+import { existsSync } from "node:fs";
+import { dirname, join, relative, resolve, sep } from "node:path";
 import { resolveSliceDocJoin } from "../catalog/docJoin.js";
 import { readSliceDoc } from "../catalog/readSliceDoc.js";
 import { realGit } from "./diff-inputs.js";
-import { loadStateFile, parseState } from "./stateFile.js";
+import { loadStateFile, parseState, modelPathMismatch } from "./stateFile.js";
 import { changedPathsSince, buildConformScope } from "./conformScope.js";
 /** The 4 canonical slice-doc lifecycle statuses (docs/slice-doc-schema.md) — the same enum
  *  `em catalog`'s header coloring and `em render`'s status legend already recognize. */
@@ -87,6 +88,41 @@ export function resolveSliceStatusFacts(file, model, refs, baseDir) {
 export function countOpenIssues(model) {
     return model.elements.filter((el) => el.issue).length;
 }
+/** Walk up from `startDir` looking for a `.specify/` directory — the same "is this a spec-kit
+ *  project, and where is its root" walk `em-sdd-bridge`'s `findRepoRoot` does (and spec-kit's own
+ *  `find_specify_root`). Returns the directory CONTAINING `.specify/`, or null at the filesystem
+ *  root. Directory existence only; nothing inside `.specify/` is read. */
+export function findSpecifyRoot(startDir) {
+    let dir = resolve(startDir);
+    for (;;) {
+        if (existsSync(join(dir, ".specify")))
+            return dir;
+        const parent = dirname(dir);
+        if (parent === dir)
+            return null;
+        dir = parent;
+    }
+}
+/**
+ * Resolve one model's implementation constitution (MIL-202). Two project shapes, one document —
+ * em never writes or expects a second copy:
+ *
+ *  - **spec-kit project** (a `.specify/` directory exists at or above `modelDir`): the document
+ *    IS `<root>/.specify/memory/constitution.md`, spec-kit's own slot. em defers to it.
+ *  - **anything else**: `<modelDir>/constitution.md`, beside the model — what `em scaffold`
+ *    writes.
+ *
+ * Existence only: this never opens the file, so a blank stock template and a fully answered,
+ * ratified constitution are indistinguishable here by design (content judgment is a human's, and
+ * `em`'s core stays deterministic and LLM-free). The advisory "is it still an unfilled template"
+ * check belongs to the SDD bridge, not here.
+ */
+export function resolveConstitution(modelDir) {
+    const base = resolve(modelDir);
+    const specifyRoot = findSpecifyRoot(base);
+    const absolute = specifyRoot ? join(specifyRoot, ".specify", "memory", "constitution.md") : join(base, "constitution.md");
+    return { present: existsSync(absolute), path: relative(base, absolute).split(sep).join("/") };
+}
 /**
  * `git rev-list --count <revision>..HEAD` in `repo` (any directory inside it, not necessarily
  * its root — same "anchor dir, resolve toplevel" convention `conformScope.ts`'s
@@ -146,16 +182,20 @@ export function resolveSlicePRsBehindHead(repo, revision, slices, runGit = realG
  * per-model namespacing), but its `Model file:` bullet names exactly ONE of them — so a sibling
  * file it does NOT describe (the common case: a `conform-scope --seed-asis` scratch copy like
  * `checkout-asis.em` sitting next to `checkout.em`) must not inherit `checkout.em`'s conformance
- * record just because it lives in the same directory. When `Model file:` is set and doesn't match
- * `basename(file)`, the record is reported as unattributed (via `error`, the same non-fatal
- * channel a git failure uses) rather than silently misattributed.
+ * record just because it lives in the same directory. `stateFile.ts`'s `modelPathMismatch` (the
+ * one check both this function and `em conform-scope`, MIL-179, run) reports that case: the
+ * record comes back unattributed (via `error`, the same non-fatal channel a git failure uses)
+ * rather than silently misattributed.
  */
 export function resolveConformanceEntry(file, repoOverride, sliceDocFacts, runGit = realGit) {
     const modelDir = dirname(file);
     const repo = repoOverride ?? modelDir;
+    // MIL-202: independent of the state file and of git — the constitution is a per-model fact
+    // every entry carries, including the early-return branches below.
+    const constitution = resolveConstitution(modelDir);
     const loaded = loadStateFile(modelDir);
     if (!loaded.ok) {
-        return { file, modelDir, hasStateFile: false, lastConformance: null, repo, commitsBehindHead: null, slicePRsBehindHead: null, error: null };
+        return { file, modelDir, hasStateFile: false, lastConformance: null, repo, commitsBehindHead: null, slicePRsBehindHead: null, constitution, error: null };
     }
     const parsed = parseState(loaded.text);
     if (!parsed.ok) {
@@ -167,23 +207,16 @@ export function resolveConformanceEntry(file, repoOverride, sliceDocFacts, runGi
             repo,
             commitsBehindHead: null,
             slicePRsBehindHead: null,
+            constitution,
             error: `state file: ${parsed.message}`,
         };
     }
-    if (parsed.state.modelPath && parsed.state.modelPath !== basename(file)) {
-        return {
-            file,
-            modelDir,
-            hasStateFile: true,
-            lastConformance: null,
-            repo,
-            commitsBehindHead: null,
-            slicePRsBehindHead: null,
-            error: `state file describes "${parsed.state.modelPath}", not "${basename(file)}" — not attributing its conformance record`,
-        };
+    const mismatch = modelPathMismatch(parsed.state.modelPath, file);
+    if (mismatch) {
+        return { file, modelDir, hasStateFile: true, lastConformance: null, repo, commitsBehindHead: null, slicePRsBehindHead: null, constitution, error: mismatch };
     }
     if (!parsed.state.lastConformance) {
-        return { file, modelDir, hasStateFile: true, lastConformance: null, repo, commitsBehindHead: null, slicePRsBehindHead: null, error: null };
+        return { file, modelDir, hasStateFile: true, lastConformance: null, repo, commitsBehindHead: null, slicePRsBehindHead: null, constitution, error: null };
     }
     const { date, revision } = parsed.state.lastConformance;
     const commitsResult = commitsBehindHead(repo, revision, runGit);
@@ -196,6 +229,7 @@ export function resolveConformanceEntry(file, repoOverride, sliceDocFacts, runGi
             repo,
             commitsBehindHead: null,
             slicePRsBehindHead: null,
+            constitution,
             error: commitsResult.message,
         };
     }
@@ -209,6 +243,7 @@ export function resolveConformanceEntry(file, repoOverride, sliceDocFacts, runGi
             repo,
             commitsBehindHead: commitsResult.count,
             slicePRsBehindHead: null,
+            constitution,
             error: slicePRsResult.message,
         };
     }
@@ -220,6 +255,7 @@ export function resolveConformanceEntry(file, repoOverride, sliceDocFacts, runGi
         repo,
         commitsBehindHead: commitsResult.count,
         slicePRsBehindHead: slicePRsResult.count,
+        constitution,
         error: null,
     };
 }
@@ -361,6 +397,12 @@ function formatConformanceValue(entry) {
         return "never conformed";
     return `\`${entry.lastConformance.revision}\` — ${formatBehindHead(entry)}`;
 }
+/** MIL-202: the per-model constitution clause — `present`, or `absent (<expected path>)` with
+ *  the path the entry already resolved (relative to that model's own directory). Shared by the
+ *  text and markdown reports so the two can't drift. Existence only; never a content judgment. */
+export function formatConstitutionPart(entry) {
+    return entry.constitution.present ? "present" : `absent (${entry.constitution.path ?? "unresolved"})`;
+}
 /** The one-line rollup: `"8/8 implemented · 20/20 invariants covered · 0 open issues · last
  *  conformed <rev>, N commits behind HEAD"` (MIL-163's acceptance line). For multiple input
  *  models, the conformance clause reports the FIRST file's entry — a single-file invocation is
@@ -398,6 +440,12 @@ export function formatStatusDetail(report) {
         const label = multi ? `conformance (${entry.file}): ` : "conformance: ";
         lines.push(`${label}${formatConformancePart(entry)}`);
     }
+    // MIL-202: one constitution line per model, after the conformance lines, same multi-model
+    // labelling convention.
+    for (const entry of report.conformance) {
+        const label = multi ? `constitution (${entry.file}): ` : "constitution: ";
+        lines.push(`${label}${formatConstitutionPart(entry)}`);
+    }
     if (report.diagnostics.length > 0) {
         lines.push(`doc issues: ${pluralize(report.diagnostics.length, "warning")} — see diagnostics (${report.diagnostics.map((d) => d.code).join(", ")})`);
     }
@@ -440,6 +488,15 @@ export function formatStatusMarkdown(report) {
             rows.push([`Last conformed (${entry.file})`, formatConformanceValue(entry)]);
         }
     }
+    // MIL-202: one Constitution row per model, same single-vs-multi labelling as "Last conformed".
+    if (report.conformance.length <= 1) {
+        rows.push(["Constitution", formatConstitutionPart(report.conformance[0])]);
+    }
+    else {
+        for (const entry of report.conformance) {
+            rows.push([`Constitution (${entry.file})`, formatConstitutionPart(entry)]);
+        }
+    }
     const header = "| Metric | Value |\n|---|---|";
     const body = rows.map(([k, v]) => `| ${escapeCell(k)} | ${escapeCell(v)} |`).join("\n");
     return `${header}\n${body}`;

package/dist/cli/status.js.map

@@ -1 +1 @@
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package/dist/cli.js

@@ -28,12 +28,12 @@ import { validateDocModelConsistency } from "./catalog/docModelConsistencyValida
 import { validateOrphanedSliceDocs } from "./catalog/orphanedSliceDocValidate.js";
 import { validateSliceReady, computeSliceReadyGates } from "./catalog/sliceReadyValidate.js";
 import { detectSliceDocCollisions } from "./catalog/modelCollisionValidate.js";
-import { checkLedger } from "./cli/ledgerCheck.js";
+import { checkLedger, readLedgerWaiverTrailers, applyLedgerWaivers } from "./cli/ledgerCheck.js";
 import { planMigration, verifyMigration } from "./cli/migrateReactionShape.js";
 import { buildLedgerJson } from "./emit/ledgerJson.js";
 import { buildCoverageReport } from "./cli/coverage.js";
 import { buildCoverageJson } from "./emit/coverageJson.js";
-import { resolveSliceStatusFacts, countOpenIssues, resolveConformanceEntry, aggregateInvariantTotals, buildStatusReport, formatStatusText, formatStatusMarkdown, buildStatusBadge, formatConformancePart, } from "./cli/status.js";
+import { resolveSliceStatusFacts, countOpenIssues, resolveConformanceEntry, aggregateInvariantTotals, buildStatusReport, formatStatusText, formatStatusMarkdown, buildStatusBadge, formatConformancePart, findSpecifyRoot, } from "./cli/status.js";
 import { buildStatusJson } from "./emit/statusJson.js";
 import { buildFreshnessJson } from "./emit/freshnessJson.js";
 import { planSkillSyncBundle, applySkillSyncBundle } from "./cli/skillSync.js";
@@ -52,6 +52,7 @@ import { planCatalogArgs } from "./cli/catalog-inputs.js";
 import { runSliceIndex } from "./cli/sliceIndex.js";
 import { runMarkImplemented } from "./cli/markImplemented.js";
 import { runRatify } from "./cli/ratify.js";
+import { runReview } from "./cli/review.js";
 import { runConformSupersede } from "./cli/conformSupersede.js";
 import { buildConformScope, changedPathsSince, resolveSliceDocFacts, seedAsisModel } from "./cli/conformScope.js";
 import { buildSliceDocContent, isSlicePattern, sliceDocKey, SLICE_PATTERNS } from "./cli/sliceNew.js";
@@ -59,8 +60,8 @@ import { wireSliceNote } from "./cli/sliceLink.js";
 import { listModelCommits } from "./cli/changelog-git.js";
 import { buildChangelogDoc } from "./cli/changelogBuild.js";
 import { runReratify } from "./cli/reratify.js";
-import { STATE_FILE_NAME, PHASES, isPhase, loadStateFile, parseState, setPhase, setConformance, setReview, isValidDateString, } from "./cli/stateFile.js";
-import { STARTER_EM, starterEmFor, scaffoldReadme, scaffoldStateFile } from "./templates.js";
+import { STATE_FILE_NAME, PHASES, isPhase, loadStateFile, parseState, setPhase, setConformance, setReview, isValidDateString, modelPathMismatch, } from "./cli/stateFile.js";
+import { STARTER_EM, starterEmFor, scaffoldReadme, scaffoldStateFile, scaffoldConstitution } from "./templates.js";
 import { kebabSlug } from "./util/slug.js";
 import { ciWorkflowPath, conformWorkflowPath, buildCiWorkflowFile, buildConformWorkflowFile, ciManagedBody, conformManagedBody, planCiFile, applyCiFile, findUnsafeCiInitArg, CI_WORKFLOW_MARKER, CONFORM_WORKFLOW_MARKER, } from "./cli/ciInit.js";
 import { RULES } from "./model/rules.js";
@@ -98,7 +99,9 @@ program
 });
 program
     .command("scaffold")
-    .description("scaffold a full project: <slug>/<slug>.em, README.md, .event-modeling.md " +
+    .description("scaffold a full project: <slug>/<slug>.em, README.md, .event-modeling.md, and " +
+    "constitution.md (the implementation constitution — skipped, with a note, in a spec-kit " +
+    "project, where `.specify/memory/constitution.md` IS that document) " +
     "(see docs/cli.md — for just a starter .em, use `em init`; for a multi-model project, " +
     "pass --under to nest it under a shared parent directory)")
     .argument("<name>", "model display name — kebab-cased for the directory and file names, used as-is for titles/prose")
@@ -122,7 +125,18 @@ program
     writeFileSync(join(dirPath, `${slugName}.em`), starterEmFor(name));
     writeFileSync(join(dirPath, "README.md"), scaffoldReadme(name, slugName));
     writeFileSync(join(dirPath, STATE_FILE_NAME), scaffoldStateFile(name, slugName, today));
+    // MIL-202: the implementation constitution. One document per project, never two — in a
+    // spec-kit project `.specify/memory/constitution.md` already IS that slot, so em defers to it
+    // and writes nothing rather than seeding a second, competing copy beside the model. Same
+    // walk-up resolution `em status` reports with (src/cli/status.ts's resolveConstitution).
+    const specifyRoot = findSpecifyRoot(dirPath);
+    if (!specifyRoot)
+        writeFileSync(join(dirPath, "constitution.md"), scaffoldConstitution(name));
     console.log(`scaffolded ${dirPath}/`);
+    if (specifyRoot) {
+        console.log("note: .specify/ found — the implementation constitution is .specify/memory/constitution.md " +
+            "(spec-kit's file); em writes no second copy");
+    }
 });
 program
     .command("render")
@@ -520,17 +534,56 @@ slice
         ? `marked implemented: ${result.path} (implementedIn: ${prUrl})`
         : `already implemented (no-op): ${result.path}`);
 });
+slice
+    .command("review")
+    .description("flip a slice doc's frontmatter to `status: reviewed` and record `reviewedBy:`/`reviewedOn:` " +
+    "— the FIRST of the two human gates (MIL-201, docs/process.md#the-slice-lifecycle-gates): " +
+    "the room walked this slice and every open question it raised is resolved. Ratification is " +
+    "a separate, later gate (`em slice ratify`). Legal from `status: draft`; idempotent on the " +
+    "same --by/--on pair; refuses to overwrite a different one already recorded; refuses a doc " +
+    "already `ready-to-implement`/`implemented`; never touches `version:` or the doc body")
+    .argument("<file>", "input .em file")
+    .argument("<slice-key>", "slice export key (kebab-case)")
+    .requiredOption("--by <name>", "the reviewer's (or facilitator's) name")
+    .option("--on <date>", "review date, YYYY-MM-DD (default: today)")
+    .action((file, sliceKey, opts) => {
+    const { model, refs, diagnostics } = compileFile(file);
+    printDiagnostics(diagnostics);
+    // Scoped the same way `em slice ratify`/`em slice mark-implemented`/`em export --slice`/
+    // `em validate --slice-ready` are: only an error concerning THIS slice refuses.
+    const scopedErrors = diagnostics.filter((d) => d.severity === "error" && d.refs?.some((r) => r === sliceKey || r.startsWith(`${sliceKey}/`)));
+    if (scopedErrors.length > 0) {
+        console.error(`em slice review: slice "${sliceKey}" has errors — fix them first`);
+        process.exit(1);
+    }
+    const today = new Date().toISOString().slice(0, 10);
+    const reviewedOn = opts.on ?? today;
+    if (opts.on !== undefined && !isValidDateString(opts.on)) {
+        console.error(`em slice review: invalid --on date "${opts.on}" — expected YYYY-MM-DD`);
+        process.exit(1);
+    }
+    const result = runReview(model, refs, dirname(file), sliceKey, opts.by, reviewedOn);
+    if (!result.ok) {
+        console.error(`em slice review: ${result.message}`);
+        process.exit(1);
+    }
+    console.log(result.changed
+        ? `reviewed: ${result.path} (reviewedBy: ${opts.by}, reviewedOn: ${reviewedOn})`
+        : `already reviewed (no-op): ${result.path}`);
+});
 slice
     .command("ratify")
     .description("flip a slice doc's frontmatter to `status: ready-to-implement` and record `ratifiedBy:`/" +
-    "`ratifiedOn:` — the handoff sign-off (MIL-165, docs/process.md#what-ratified-means) that " +
-    "makes who ratified, and when, a first-class recorded fact. Idempotent on the same " +
-    "--by/--on pair; refuses to overwrite a different one already recorded; never touches " +
-    "`version:` or the doc body")
+    "`ratifiedOn:` — the handoff sign-off (MIL-165, docs/process.md#the-slice-lifecycle-gates) " +
+    "that makes who ratified, and when, a first-class recorded fact. Refuses a doc that never " +
+    "passed the review gate (`em slice review`) unless --skip-review is passed. Idempotent on " +
+    "the same --by/--on pair; refuses to overwrite a different one already recorded; never " +
+    "touches `version:` or the doc body")
     .argument("<file>", "input .em file")
     .argument("<slice-key>", "slice export key (kebab-case)")
     .requiredOption("--by <name>", "the ratifier's name")
     .option("--on <date>", "ratification date, YYYY-MM-DD (default: today)")
+    .option("--skip-review", "ratify without a recorded review — prints a loud notice on stderr")
     .action((file, sliceKey, opts) => {
     const { model, refs, diagnostics } = compileFile(file);
     printDiagnostics(diagnostics);
@@ -547,11 +600,23 @@ slice
         console.error(`em slice ratify: invalid --on date "${opts.on}" — expected YYYY-MM-DD`);
         process.exit(1);
     }
-    const result = runRatify(model, refs, dirname(file), sliceKey, opts.by, ratifiedOn);
+    const result = runRatify(model, refs, dirname(file), sliceKey, opts.by, ratifiedOn, opts.skipReview === true);
     if (!result.ok) {
         console.error(`em slice ratify: ${result.message}`);
         process.exit(1);
     }
+    // Loud, on stderr, exactly when --skip-review is what let this through — the skip is a
+    // visible act in the terminal and in CI logs, and deliberately leaves no trace in the doc.
+    if (result.skippedReviewFrom !== null) {
+        console.error(`notice: --skip-review — ratifying "${sliceKey}" without a recorded review ` +
+            `(status was ${result.skippedReviewFrom})`);
+    }
+    // MIL-198: advisory only, never refuses — ratifying ahead of an upstream slice the model's
+    // own timeline puts before this one (query index `in` adjacency, one hop, other slices only)
+    // is sometimes deliberate; this just makes it visible in the terminal and CI logs.
+    for (const upstream of result.upstreamWarnings) {
+        console.error(`warn: ratifying "${sliceKey}" ahead of upstream slice "${upstream.sliceKey}" (status: ${upstream.status})`);
+    }
     console.log(result.changed
         ? `ratified: ${result.path} (ratifiedBy: ${opts.by}, ratifiedOn: ${ratifiedOn})`
         : `already ratified (no-op): ${result.path}`);
@@ -561,8 +626,9 @@ slice
     .description("bump `version:` and flip a shipped slice doc's frontmatter back to `status: " +
     "ready-to-implement` — the re-ratification mechanical edit (MIL-161, mirrors `em slice " +
     "mark-implemented`). Only applies to a doc at `status: implemented`; clears any stale " +
-    "`ratifiedBy:`/`ratifiedOn:` (they describe the PRIOR version's sign-off) so a follow-up " +
-    "`em slice ratify --by` applies cleanly; never touches `implementedIn:` or the doc body")
+    "`ratifiedBy:`/`ratifiedOn:`/`reviewedBy:`/`reviewedOn:` (they describe the PRIOR version's " +
+    "review and sign-off) so a follow-up `em slice ratify --by` applies cleanly — and needs no " +
+    "fresh review; never touches `implementedIn:` or the doc body")
     .argument("<file>", "input .em file")
     .argument("<slice-key>", "slice export key (kebab-case)")
     .action((file, sliceKey) => {
@@ -765,7 +831,14 @@ program
         console.error(`em conform-scope: ${parsed.message}`);
         process.exit(1);
     }
-    const { lastConformance } = parsed.state;
+    // MIL-179: the state file names exactly one model in `Model file:`; a sibling this run
+    // isn't describing (e.g. a `--seed-asis` scratch copy) must not inherit its conformance
+    // record. Same check `em status`'s resolveConformanceEntry runs (PR #116).
+    const stateFileMismatch = modelPathMismatch(parsed.state.modelPath, file);
+    if (stateFileMismatch) {
+        console.error(stateFileMismatch);
+    }
+    const lastConformance = stateFileMismatch ? null : parsed.state.lastConformance;
     const { facts, diagnostics: docDiags } = resolveSliceDocFacts(model, refs, dirname(file));
     printDiagnostics(newDiagnostics(docDiags, diagnostics));
     const skipGit = !!opts.full || lastConformance === null;
@@ -780,6 +853,9 @@ program
     }
     const scope = buildConformScope(facts, lastConformance, changedPaths, !!opts.full);
     const output = { ...scope };
+    if (stateFileMismatch) {
+        output.stateFile = { error: stateFileMismatch };
+    }
     if (opts.seedAsis) {
         output.seeded = seedAsisModel(file);
     }
@@ -1031,6 +1107,9 @@ program
     if (plan.refusals.length > 0)
         process.exitCode = 1;
 });
+function describeLedgerWaiveSource(source) {
+    return source.source === "flag" ? "--waive" : `trailer ${source.commit.slice(0, 7)}`;
+}
 program
     .command("ledger")
     .description("check slice docs' version: field agrees with their content across two git revisions " +
@@ -1038,6 +1117,8 @@ program
     .argument("<file>", "anchor .em file — locates slices/ relative to it; never parsed")
     .option("--from <rev>", "baseline revision")
     .option("--to <rev>", "compare revision (default: current working tree)")
+    .option("--waive <slice-key>", "excuse a doc-content-without-version-bump finding for this slice key (repeatable; MIL-185, " +
+    "see docs/cli.md) — never waives a version regression or bump-without-content-change", (value, previous) => [...previous, value], [])
     .option("--json", "print a JSON document instead of the text report (see docs/cli.md)")
     .action((file, opts) => {
     if (!opts.from) {
@@ -1045,18 +1126,30 @@ program
         process.exit(1);
     }
     const to = opts.to ?? null;
-    const result = checkLedger(file, opts.from, to);
+    const rawResult = checkLedger(file, opts.from, to);
+    // Commit trailers apply only to CI/manual runs against a real range — the working-tree
+    // comparison itself (`to === null`) still resolves the trailer range as `from..HEAD`, since
+    // an uncommitted change has no commit to carry a trailer; that gap is `--waive`'s job (see
+    // docs/cli.md).
+    const trailerWaivers = readLedgerWaiverTrailers(file, opts.from, to);
+    const { result, unknownWaivers } = applyLedgerWaivers(rawResult, opts.waive, trailerWaivers);
+    for (const note of unknownWaivers) {
+        console.error(`note: waiver for unknown slice "${note.sliceKey}" ignored`);
+    }
     if (opts.json) {
         process.stdout.write(buildLedgerJson(result, opts.from, to) + "\n");
     }
     else {
         for (const f of result.findings)
             console.log(f.message);
+        for (const w of result.waived)
+            console.log(`waived: ${w.message} (waived by ${describeLedgerWaiveSource(w.waivedBy)})`);
+        const waivedNote = result.waived.length > 0 ? `, ${result.waived.length} waived` : "";
         if (result.findings.length === 0) {
-            console.log(`ok — ledger agrees (${result.checkedCount} slice doc(s) checked)`);
+            console.log(`ok — ledger agrees (${result.checkedCount} slice doc(s) checked${waivedNote})`);
         }
         else {
-            console.log(`${result.findings.length} ledger mismatch(es)`);
+            console.log(`${result.findings.length} ledger mismatch(es)${waivedNote}`);
         }
     }
     // Set the code rather than process.exit(): same rationale as em diff/em glossary — stdout
@@ -1497,8 +1590,14 @@ const skill = program
     .description("manage Claude Code skills bundled with em");
 skill
     .command("install")
-    .description("copy the event-modeling skill bundle into .claude/skills/ (event-modeling, event-modeling-discover/-design/-implement/-conform/-review, event-modeling-shared)")
-    .option("-f, --force", "overwrite an existing installation")
+    .description("copy the event-modeling skill bundle into .claude/skills/ (event-modeling, event-modeling-" +
+    "discover/-design/-implement/-conform/-review, event-modeling-shared); across a structural " +
+    "bundle change (e.g. the MIL-157 split of the old single event-modeling/ directory into " +
+    "this six-directory bundle), `em skill sync` is the migration path — --force now performs " +
+    "the same reconcile (MIL-180)")
+    .option("-f, --force", "overwrite an existing installation, reconciling added/updated/removed files within the " +
+    "bundle's own managed directories the same way `em skill sync` does — never touching an " +
+    "unrelated sibling skill (MIL-180)")
     .option("--no-agents-md", "skip writing/updating the AGENTS.md agent-contract section (on by default, MIL-129)")
     .action(async (opts) => {
     const srcRoot = packagedSkillsRoot();
@@ -1508,6 +1607,31 @@ skill
         console.log(`skill already installed at ${anchor}`);
         console.log("re-run with --force to overwrite");
     }
+    else if (existsSync(anchor)) {
+        // --force on an existing installation (MIL-180): reconcile via the same plan/apply
+        // `em skill sync` uses instead of a raw recursive copy, so a file that no longer exists
+        // in the packaged bundle (e.g. left behind by the MIL-157 6-directory split) is removed
+        // from the vendored copy too. Scoped to EM_ALL_SKILL_BUNDLE_DIRS only, exactly like sync
+        // — an unrelated sibling skill under .claude/skills/ is never walked, never touched.
+        await mkdir(destRoot, { recursive: true });
+        const bundlePlan = planSkillSyncBundle(srcRoot, destRoot, EM_ALL_SKILL_BUNDLE_DIRS);
+        const totalChanges = bundlePlan.reduce((n, { plan }) => n + plan.changes.length, 0);
+        const totalUnchanged = bundlePlan.reduce((n, { plan }) => n + plan.unchangedCount, 0);
+        const removedCount = bundlePlan.reduce((n, { plan }) => n + plan.changes.filter((c) => c.kind === "removed").length, 0);
+        applySkillSyncBundle(bundlePlan, srcRoot, destRoot);
+        for (const { dirName, plan } of bundlePlan) {
+            for (const c of plan.changes)
+                console.log(`${c.kind}: ${dirName}/${c.relPath}`);
+        }
+        if (totalChanges === 0) {
+            console.log(`installed event-modeling skill bundle → ${destRoot} — already up to date (${totalUnchanged} file(s))`);
+        }
+        else {
+            console.log(`installed event-modeling skill bundle → ${destRoot} — ${totalChanges} file(s) changed ` +
+                `(${removedCount} removed), ${totalUnchanged} unchanged`);
+        }
+        console.log("in Claude Code, run /event-modeling to start a guided session");
+    }
     else {
         await mkdir(destRoot, { recursive: true });
         for (const name of EM_ALL_SKILL_BUNDLE_DIRS) {