@milaboratories/pl-model-common 1.21.4 → 1.21.5

package/dist/drivers/pframe/pframe.d.ts

@@ -1,7 +1,7 @@
 import type { PObjectId } from '../../pool';
 import type { TableRange } from './data_types';
 import type { FindColumnsRequest, FindColumnsResponse } from './find_columns';
-import type { PColumn, PColumnIdAndSpec, PColumnSpec } from './spec/spec';
+import type { PColumnIdAndSpec, PColumnSpec } from './spec/spec';
 import type { CalculateTableDataRequest, CalculateTableDataResponse } from './table_calculate';
 import type { UniqueValuesRequest, UniqueValuesResponse } from './unique_values';
 /** Read interface exposed by PFrames library */
@@ -21,5 +21,5 @@ export interface PFrame {
     getUniqueValues(request: UniqueValuesRequest): Promise<UniqueValuesResponse>;
 }
 /** Information required to instantiate a PFrame. */
-export type PFrameDef<Data> = PColumn<Data>[];
+export type PFrameDef<Col> = Col[];
 //# sourceMappingURL=pframe.d.ts.map

package/dist/drivers/pframe/pframe.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"pframe.d.ts","sourceRoot":"","sources":["../../../src/drivers/pframe/pframe.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAC5C,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC/C,OAAO,KAAK,EAAE,kBAAkB,EAAE,mBAAmB,EAAE,MAAM,gBAAgB,CAAC;AAC9E,OAAO,KAAK,EAAE,gBAAgB,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AACjE,OAAO,KAAK,EACV,yBAAyB,EACzB,0BAA0B,EAC3B,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EAAE,mBAAmB,EAAE,oBAAoB,EAAE,MAAM,iBAAiB,CAAC;AAEjF,gDAAgD;AAChD,MAAM,WAAW,MAAM;IACrB;;;SAGK;IACL,WAAW,CAAC,OAAO,EAAE,kBAAkB,GAAG,OAAO,CAAC,mBAAmB,CAAC,CAAC;IAEvE,kCAAkC;IAClC,aAAa,CAAC,QAAQ,EAAE,SAAS,GAAG,OAAO,CAAC,WAAW,CAAC,CAAC;IAEzD,2EAA2E;IAC3E,WAAW,IAAI,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAAC;IAE3C,mFAAmF;IACnF,kBAAkB,CAChB,OAAO,EAAE,yBAAyB,CAAC,SAAS,CAAC,EAC7C,KAAK,CAAC,EAAE,UAAU,GACjB,OAAO,CAAC,0BAA0B,CAAC,CAAC;IAEvC,yFAAyF;IACzF,eAAe,CAAC,OAAO,EAAE,mBAAmB,GAAG,OAAO,CAAC,oBAAoB,CAAC,CAAC;CAC9E;AAED,oDAAoD;AACpD,MAAM,MAAM,SAAS,CAAC,GAAG,IAAI,GAAG,EAAE,CAAC"}

package/dist/drivers/pframe/spec/spec.cjs.map

@@ -1 +1 @@
-{"version":3,"file":"spec.cjs","sources":["../../../../src/drivers/pframe/spec/spec.ts"],"sourcesContent":["import { ensureError } from '../../../errors';\nimport {\n  canonicalizeJson,\n  type CanonicalizedJson,\n  type StringifiedJson,\n} from '../../../json';\nimport type {\n  PObject,\n  PObjectId,\n  PObjectSpec,\n} from '../../../pool';\nimport { z } from 'zod';\n\nexport const ValueType = {\n  Int: 'Int',\n  Long: 'Long',\n  Float: 'Float',\n  Double: 'Double',\n  String: 'String',\n  Bytes: 'Bytes',\n} as const;\n\n/** PFrame columns and axes within them may store one of these types. */\nexport type ValueType = (typeof ValueType)[keyof typeof ValueType];\n\nexport type Metadata = Record<string, string>;\n\nexport function readMetadata<U extends Metadata, T extends keyof U = keyof U>(\n  metadata: Metadata | undefined,\n  key: T,\n): U[T] | undefined {\n  return (metadata as U | undefined)?.[key];\n}\n\ntype MetadataJsonImpl<M> = {\n  [P in keyof M as (M[P] extends StringifiedJson ? P : never)]: M[P] extends StringifiedJson<infer U> ? z.ZodType<U> : never;\n};\nexport type MetadataJson<M> = MetadataJsonImpl<Required<M>>;\n\nexport function readMetadataJsonOrThrow<M extends Metadata, T extends keyof MetadataJson<M>>(\n  metadata: Metadata | undefined,\n  metadataJson: MetadataJson<M>,\n  key: T,\n  methodNameInError: string = 'readMetadataJsonOrThrow',\n): z.infer<MetadataJson<M>[T]> | undefined {\n  const json = readMetadata<M, T>(metadata, key);\n  if (json === undefined) return undefined;\n\n  const schema = metadataJson[key];\n  try {\n    const value = JSON.parse(json);\n    return schema.parse(value);\n  } catch (error: unknown) {\n    throw new Error(\n      `${methodNameInError} failed, `\n      + `key: ${String(key)}, `\n      + `value: ${json}, `\n      + `error: ${ensureError(error)}`,\n    );\n  }\n}\n\nexport function readMetadataJson<M extends Metadata, T extends keyof MetadataJson<M>>(\n  metadata: Metadata | undefined,\n  metadataJson: MetadataJson<M>,\n  key: T,\n): z.infer<MetadataJson<M>[T]> | undefined {\n  try {\n    return readMetadataJsonOrThrow(metadata, metadataJson, key);\n  } catch {\n    return undefined; // treat invalid values as unset\n  }\n}\n\n/// Well-known domains\nexport const Domain = {\n  Alphabet: 'pl7.app/alphabet',\n  BlockId: 'pl7.app/blockId',\n} as const;\n\nexport type Domain = Metadata & Partial<{\n  [Domain.Alphabet]: 'nucleotide' | 'aminoacid' | string;\n  [Domain.BlockId]: string;\n}>;\n\nexport type DomainJson = MetadataJson<Domain>;\nexport const DomainJson: DomainJson = {};\n\n/// Helper function for reading plain domain values\nexport function readDomain<T extends keyof Domain>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): Domain[T] | undefined {\n  return readMetadata<Domain, T>(spec?.domain, key);\n}\n\n/// Helper function for reading json-encoded domain values, throws on JSON parsing error\nexport function readDomainJsonOrThrow<T extends keyof DomainJson>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<DomainJson[T]> | undefined {\n  return readMetadataJsonOrThrow<Domain, T>(spec?.domain, DomainJson, key, 'readDomainJsonOrThrow');\n}\n\n/// Helper function for reading json-encoded domain values, returns undefined on JSON parsing error\nexport function readDomainJson<T extends keyof DomainJson>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<DomainJson[T]> | undefined {\n  return readMetadataJson<Domain, T>(spec?.domain, DomainJson, key);\n}\n\n/// Well-known annotations\nexport const Annotation = {\n  AxisNature: 'pl7.app/axisNature',\n  Alphabet: 'pl7.app/alphabet',\n  Description: 'pl7.app/description',\n  DiscreteValues: 'pl7.app/discreteValues',\n  Format: 'pl7.app/format',\n  Graph: {\n    Axis: {\n      HighCardinality: 'pl7.app/graph/axis/highCardinality',\n      LowerLimit: 'pl7.app/graph/axis/lowerLimit',\n      SymmetricRange: 'pl7.app/graph/axis/symmetricRange',\n      UpperLimit: 'pl7.app/graph/axis/upperLimit',\n    },\n    IsDenseAxis: 'pl7.app/graph/isDenseAxis',\n    IsVirtual: 'pl7.app/graph/isVirtual',\n    Palette: 'pl7.app/graph/palette',\n    Thresholds: 'pl7.app/graph/thresholds',\n    TreatAbsentValuesAs: 'pl7.app/graph/treatAbsentValuesAs',\n  },\n  HideDataFromUi: 'pl7.app/hideDataFromUi',\n  HideDataFromGraphs: 'pl7.app/hideDataFromGraphs',\n  IsDiscreteFilter: 'pl7.app/isDiscreteFilter',\n  IsLinkerColumn: 'pl7.app/isLinkerColumn',\n  IsSubset: 'pl7.app/isSubset',\n  Label: 'pl7.app/label',\n  Max: 'pl7.app/max',\n  Min: 'pl7.app/min',\n  MultipliesBy: 'pl7.app/multipliesBy',\n  Parents: 'pl7.app/parents',\n  Sequence: {\n    Annotation: {\n      Mapping: 'pl7.app/sequence/annotation/mapping',\n    },\n    IsAnnotation: 'pl7.app/sequence/isAnnotation',\n  },\n  Table: {\n    FontFamily: 'pl7.app/table/fontFamily',\n    OrderPriority: 'pl7.app/table/orderPriority',\n    Visibility: 'pl7.app/table/visibility',\n  },\n  Trace: 'pl7.app/trace',\n} as const;\n\nexport type Annotation = Metadata & Partial<{\n  [Annotation.Alphabet]: 'nucleotide' | 'aminoacid' | string;\n  [Annotation.AxisNature]: 'homogeneous' | 'heterogeneous' | 'scaleCompatible' | string;\n  [Annotation.Description]: string;\n  [Annotation.DiscreteValues]: StringifiedJson<number[]> | StringifiedJson<string[]>;\n  [Annotation.Format]: string;\n  [Annotation.Graph.Axis.HighCardinality]: StringifiedJson<boolean>;\n  [Annotation.Graph.Axis.LowerLimit]: StringifiedJson<number>;\n  [Annotation.Graph.Axis.SymmetricRange]: StringifiedJson<boolean>;\n  [Annotation.Graph.Axis.UpperLimit]: StringifiedJson<number>;\n  [Annotation.Graph.IsDenseAxis]: StringifiedJson<boolean>;\n  [Annotation.Graph.IsVirtual]: StringifiedJson<boolean>;\n  [Annotation.Graph.Palette]: StringifiedJson<{ mapping: Record<string, number>; name: string }>;\n  [Annotation.Graph.Thresholds]: StringifiedJson<{ columnId: { valueType: ValueType; name: string }; value: number }[]>;\n  [Annotation.Graph.TreatAbsentValuesAs]: StringifiedJson<number>;\n  [Annotation.HideDataFromUi]: StringifiedJson<boolean>;\n  [Annotation.HideDataFromGraphs]: StringifiedJson<boolean>;\n  [Annotation.IsDiscreteFilter]: StringifiedJson<boolean>;\n  [Annotation.IsLinkerColumn]: StringifiedJson<boolean>;\n  [Annotation.IsSubset]: StringifiedJson<boolean>;\n  [Annotation.Label]: string;\n  [Annotation.Max]: StringifiedJson<number>;\n  [Annotation.Min]: StringifiedJson<number>;\n  [Annotation.MultipliesBy]: StringifiedJson<AxisSpec['name'][]>;\n  [Annotation.Parents]: StringifiedJson<AxisSpec['name'][]>;\n  [Annotation.Sequence.Annotation.Mapping]: StringifiedJson<Record<string, string>>;\n  [Annotation.Sequence.IsAnnotation]: StringifiedJson<boolean>;\n  [Annotation.Table.FontFamily]: string;\n  [Annotation.Table.OrderPriority]: StringifiedJson<number>;\n  [Annotation.Table.Visibility]: 'hidden' | 'optional' | string;\n  [Annotation.Trace]: StringifiedJson<Record<string, unknown>>;\n}>;\n\n// export const AxisSpec = z.object({\n//   type: z.nativeEnum(ValueType),\n//   name: z.string(),\n//   domain: z.record(z.string(), z.string()).optional(),\n//   annotations: z.record(z.string(), z.string()).optional(),\n//   parentAxes: z.array(z.number()).optional(),\n// }).passthrough();\n//\n// type Expect<T extends true> = T;\n// type Equal<X, Y> =\n// (<T>() => T extends X ? 1 : 2) extends (<T>() => T extends Y ? 1 : 2) ? true : false;\n//\n// type _test = Expect<Equal<\n//   Readonly<z.infer<typeof AxisSpec>>,\n//   Readonly<AxisSpec & Record<string, unknown>>\n// >>;\n\nexport type AnnotationJson = MetadataJson<Annotation>;\n\nconst ValueTypeSchema = z.enum(['Int', 'Long', 'Float', 'Double', 'String'] as const);\nexport const AnnotationJson: AnnotationJson = {\n  [Annotation.DiscreteValues]: z.array(z.string()).or(z.array(z.number())),\n  [Annotation.Graph.Axis.HighCardinality]: z.boolean(),\n  [Annotation.Graph.Axis.LowerLimit]: z.number(),\n  [Annotation.Graph.Axis.UpperLimit]: z.number(),\n  [Annotation.Graph.Axis.SymmetricRange]: z.boolean(),\n  [Annotation.Graph.IsDenseAxis]: z.boolean(),\n  [Annotation.Graph.Palette]: z.object({ mapping: z.record(z.number()), name: z.string() }),\n  [Annotation.Graph.Thresholds]: z.array(\n    z.object({\n      columnId: z.object({ valueType: ValueTypeSchema, name: z.string() }),\n      value: z.number(),\n    }),\n  ),\n  [Annotation.Graph.TreatAbsentValuesAs]: z.number(),\n  [Annotation.Graph.IsVirtual]: z.boolean(),\n  [Annotation.HideDataFromUi]: z.boolean(),\n  [Annotation.HideDataFromGraphs]: z.boolean(),\n  [Annotation.IsDiscreteFilter]: z.boolean(),\n  [Annotation.IsLinkerColumn]: z.boolean(),\n  [Annotation.IsSubset]: z.boolean(),\n  [Annotation.Max]: z.number(),\n  [Annotation.Min]: z.number(),\n  [Annotation.MultipliesBy]: z.array(z.string()),\n  [Annotation.Parents]: z.array(z.string()),\n  [Annotation.Sequence.Annotation.Mapping]: z.record(z.string(), z.string()),\n  [Annotation.Sequence.IsAnnotation]: z.boolean(),\n  [Annotation.Table.OrderPriority]: z.number(),\n  [Annotation.Trace]: z.record(z.string(), z.unknown()),\n};\n\n/// Helper function for reading plain annotation values\nexport function readAnnotation<T extends keyof Annotation>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): Annotation[T] | undefined {\n  return readMetadata<Annotation, T>(spec?.annotations, key);\n}\n\n/// Helper function for reading json-encoded annotation values, throws on JSON parsing error\nexport function readAnnotationJsonOrThrow<T extends keyof AnnotationJson>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<AnnotationJson[T]> | undefined {\n  return readMetadataJsonOrThrow<Annotation, T>(spec?.annotations, AnnotationJson, key, 'readAnnotationJsonOrThrow');\n}\n\n/// Helper function for reading json-encoded annotation values, returns undefined on JSON parsing error\nexport function readAnnotationJson<T extends keyof AnnotationJson>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<AnnotationJson[T]> | undefined {\n  return readMetadataJson<Annotation, T>(spec?.annotations, AnnotationJson, key);\n}\n\n/**\n * Specification of an individual axis.\n *\n * Each axis is a part of a composite key that addresses data inside the PColumn.\n *\n * Each record inside a PColumn is addressed by a unique tuple of values set for\n * all the axes specified in the column spec.\n */\nexport interface AxisSpec {\n  /** Type of the axis value. Should not use non-key types like float or double. */\n  readonly type: ValueType;\n\n  /** Name of the axis */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** Any additional information attached to the axis that does not affect its\n   * identifier */\n  readonly annotations?: Record<string, string>;\n\n  /**\n   * Parent axes provide contextual grouping for the axis in question, establishing\n   * a hierarchy where the current axis is dependent on one or more axes for its\n   * full definition and meaning. For instance, in a data structure where each\n   * \"container\" axis may contain multiple \"item\" axes, the `item` axis would\n   * list the index of the `container` axis in this field to denote its dependency.\n   *\n   * This means that the identity or significance of the `item` axis is only\n   * interpretable when combined with its parent `container` axis. An `item` axis\n   * index by itself may be non-unique and only gains uniqueness within the context\n   * of its parent `container`. Therefore, the `parentAxes` field is essential for\n   * mapping these relationships and ensuring data coherence across nested or\n   * multi-level data models.\n   *\n   * A list of zero-based indices of parent axes in the overall axes specification\n   * from the column spec. Each index corresponds to the position of a parent axis\n   * in the list that defines the structure of the data model.\n   */\n  readonly parentAxes?: number[];\n}\n\n/** Parents are specs, not indexes; normalized axis can be used considering its parents independently from column */\nexport interface AxisSpecNormalized extends Omit<AxisSpec, 'parentAxes'> {\n  parentAxesSpec: AxisSpecNormalized[];\n}\n\n/** Tree: axis is a root, its parents are children */\nexport type AxisTree = {\n  axis: AxisSpecNormalized;\n  children: AxisTree[]; // parents\n};\n\nfunction makeAxisTree(axis: AxisSpecNormalized): AxisTree {\n  return { axis, children: [] };\n}\n\n/** Build tree by axis parents annotations */\nexport function getAxesTree(rootAxis: AxisSpecNormalized): AxisTree {\n  const root = makeAxisTree(rootAxis);\n  let nodesQ = [root];\n  while (nodesQ.length) {\n    const nextNodes: AxisTree[] = [];\n    for (const node of nodesQ) {\n      node.children = node.axis.parentAxesSpec.map(makeAxisTree);\n      nextNodes.push(...node.children);\n    }\n    nodesQ = nextNodes;\n  }\n  return root;\n}\n\n/** Get set of canonicalized axisIds from axisTree */\nexport function getSetFromAxisTree(tree: AxisTree): Set<CanonicalizedJson<AxisId>> {\n  const set = new Set([canonicalizeJson(getAxisId(tree.axis))]);\n  let nodesQ = [tree];\n  while (nodesQ.length) {\n    const nextNodes = [];\n    for (const node of nodesQ) {\n      for (const parent of node.children) {\n        set.add(canonicalizeJson(getAxisId(parent.axis)));\n        nextNodes.push(parent);\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return set;\n}\n\n/** Get array of axisSpecs from axisTree */\nexport function getArrayFromAxisTree(tree: AxisTree): AxisSpecNormalized[] {\n  const res = [tree.axis];\n  let nodesQ = [tree];\n  while (nodesQ.length) {\n    const nextNodes = [];\n    for (const node of nodesQ) {\n      for (const parent of node.children) {\n        res.push(parent.axis);\n        nextNodes.push(parent);\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return res;\n}\n\nexport function canonicalizeAxisWithParents(axis: AxisSpecNormalized) {\n  return canonicalizeJson(getArrayFromAxisTree(getAxesTree(axis)).map(getAxisId));\n}\n\nfunction normalizingAxesComparator(axis1: AxisSpecNormalized, axis2: AxisSpecNormalized): 1 | -1 | 0 {\n  if (axis1.name !== axis2.name) {\n    return axis1.name < axis2.name ? 1 : -1;\n  }\n  if (axis1.type !== axis2.type) {\n    return axis1.type < axis2.type ? 1 : -1;\n  }\n  const domain1 = canonicalizeJson(axis1.domain ?? {});\n  const domain2 = canonicalizeJson(axis2.domain ?? {});\n  if (domain1 !== domain2) {\n    return domain1 < domain2 ? 1 : -1;\n  }\n\n  const parents1 = canonicalizeAxisWithParents(axis1);\n  const parents2 = canonicalizeAxisWithParents(axis2);\n\n  if (parents1 !== parents2) {\n    return parents1 < parents2 ? 1 : -1;\n  }\n\n  const annotation1 = canonicalizeJson(axis1.annotations ?? {});\n  const annotation2 = canonicalizeJson(axis2.annotations ?? {});\n  if (annotation1 !== annotation2) {\n    return annotation1 < annotation2 ? 1 : -1;\n  }\n  return 0;\n}\n\nfunction parseParentsFromAnnotations(axis: AxisSpec) {\n  const parentsList = readAnnotationJson(axis, Annotation.Parents);\n  if (parentsList === undefined) {\n    return [];\n  }\n  return parentsList;\n}\n\nfunction sortParentsDeep(axisSpec: AxisSpecNormalized) {\n  axisSpec.parentAxesSpec.forEach(sortParentsDeep);\n  axisSpec.parentAxesSpec.sort(normalizingAxesComparator);\n}\n\nfunction hasCycleOfParents(axisSpec: AxisSpecNormalized) {\n  const root = makeAxisTree(axisSpec);\n  let nodesQ = [root];\n  const ancestors = new Set(canonicalizeJson(getAxisId(axisSpec)));\n  while (nodesQ.length) {\n    const nextNodes: AxisTree[] = [];\n    const levelIds = new Set<CanonicalizedJson<AxisId>>();\n    for (const node of nodesQ) {\n      node.children = node.axis.parentAxesSpec.map(makeAxisTree);\n      for (const child of node.children) {\n        const childId = canonicalizeJson(getAxisId(child.axis));\n        if (!levelIds.has(childId)) {\n          nextNodes.push(child);\n          levelIds.add(childId);\n          if (ancestors.has(childId)) {\n            return true;\n          }\n          ancestors.add(childId);\n        }\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return false;\n}\n\n/** Create list of normalized axisSpec (parents are in array of specs, not indexes) */\nexport function getNormalizedAxesList(axes: AxisSpec[]): AxisSpecNormalized[] {\n  if (!axes.length) {\n    return [];\n  }\n  const modifiedAxes: AxisSpecNormalized[] = axes.map((axis) => {\n    const { parentAxes: _, ...copiedRest } = axis;\n    return { ...copiedRest, annotations: { ...copiedRest.annotations }, parentAxesSpec: [] };\n  });\n\n  axes.forEach((axis, idx) => {\n    const modifiedAxis = modifiedAxes[idx];\n    if (axis.parentAxes) { // if we have parents by indexes then take from the list\n      modifiedAxis.parentAxesSpec = axis.parentAxes.map((idx) => modifiedAxes[idx]);\n    } else { // else try to parse from annotation name\n      const parents = parseParentsFromAnnotations(axis).map((name) => modifiedAxes.find((axis) => axis.name === name));\n      modifiedAxis.parentAxesSpec = parents.some((p) => p === undefined) ? [] : parents as AxisSpecNormalized[];\n\n      delete modifiedAxis.annotations?.[Annotation.Parents];\n    }\n  });\n\n  if (modifiedAxes.some(hasCycleOfParents)) { // Axes list is broken\n    modifiedAxes.forEach((axis) => {\n      axis.parentAxesSpec = [];\n    });\n  } else {\n    modifiedAxes.forEach((axis) => {\n      sortParentsDeep(axis);\n    });\n  }\n\n  return modifiedAxes;\n}\n\n/** Create list of regular axisSpec from normalized (parents are indexes, inside of current axes list) */\nexport function getDenormalizedAxesList(axesSpec: AxisSpecNormalized[]): AxisSpec[] {\n  const idsList = axesSpec.map((axisSpec) => canonicalizeJson(getAxisId(axisSpec)));\n  return axesSpec.map((axisSpec) => {\n    const parentsIds = axisSpec.parentAxesSpec.map((axisSpec) => canonicalizeJson(getAxisId(axisSpec)));\n    const parentIdxs = parentsIds.map((id) => idsList.indexOf(id));\n    const { parentAxesSpec: _, ...copiedRest } = axisSpec;\n    if (parentIdxs.length) {\n      return { ...copiedRest, parentAxes: parentIdxs } as AxisSpec;\n    }\n    return copiedRest;\n  });\n}\n\n/** Common type representing spec for all the axes in a column */\nexport type AxesSpec = AxisSpec[];\n\n/// Well-known column names\nexport const PColumnName = {\n  Label: 'pl7.app/label',\n  Table: {\n    RowSelection: 'pl7.app/table/row-selection',\n  },\n} as const;\n\n/**\n * Full column specification including all axes specs and specs of the column\n * itself.\n *\n * A PColumn in its essence represents a mapping from a fixed size, explicitly\n * typed tuple to an explicitly typed value.\n *\n * (axis1Value1, axis2Value1, ...) -> columnValue\n *\n * Each element in tuple correspond to the axis having the same index in axesSpec.\n */\nexport interface PUniversalColumnSpec extends PObjectSpec {\n  /** Defines specific type of BObject, the most generic type of unit of\n   * information in Platforma Project. */\n  readonly kind: 'PColumn';\n\n  /** Type of column values */\n  readonly valueType: string;\n\n  /** Column name */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** Any additional information attached to the column that does not affect its\n   * identifier */\n  readonly annotations?: Record<string, string>;\n\n  /** A list of zero-based indices of parent axes from the {@link axesSpec} array. */\n  readonly parentAxes?: number[];\n\n  /** Axes specifications */\n  readonly axesSpec: AxesSpec;\n}\n\n/**\n * Specification of a data column.\n *\n * Data column is a specialized type of PColumn that stores only simple values (strings and numbers)\n * addressed by multiple keys. This is in contrast to other PColumn variants that can store more complex\n * values like files or other abstract data types. Data columns are optimized for storing and processing\n * basic tabular data.\n */\nexport interface PDataColumnSpec extends PUniversalColumnSpec {\n  /** Type of column values */\n  readonly valueType: ValueType;\n}\n\n// @todo: change this to PUniversalColumnSpec\nexport type PColumnSpec = PDataColumnSpec;\n\n/** Unique PColumnSpec identifier */\nexport type PColumnSpecId = {\n  /** Defines specific type of BObject, the most generic type of unit of\n   * information in Platforma Project. */\n  readonly kind: 'PColumn';\n\n  /** Type of column values */\n  readonly valueType: ValueType;\n\n  /** Column name */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** A list of zero-based indices of parent axes from the {@link axesSpec} array. */\n  readonly parentAxes?: number[];\n\n  /** Axes id */\n  readonly axesId: AxesId;\n};\n\nexport function getPColumnSpecId(spec: PColumnSpec): PColumnSpecId {\n  return {\n    kind: spec.kind,\n    valueType: spec.valueType,\n    name: spec.name,\n    domain: spec.domain,\n    parentAxes: spec.parentAxes,\n    axesId: getAxesId(spec.axesSpec),\n  };\n}\n\nexport interface PColumn<Data> extends PObject<Data> {\n  /** PColumn spec, allowing it to be found among other PObjects */\n  readonly spec: PColumnSpec;\n}\n\n/** Columns in a PFrame also have internal identifier, this object represents\n * combination of specs and such id */\nexport interface PColumnIdAndSpec {\n  /** Internal column id within the PFrame */\n  readonly columnId: PObjectId;\n\n  /** Column spec */\n  readonly spec: PColumnSpec;\n}\n\n/** Get column id and spec from a column */\nexport function getColumnIdAndSpec<Data>(column: PColumn<Data>): PColumnIdAndSpec {\n  return {\n    columnId: column.id,\n    spec: column.spec,\n  };\n}\n\n/** Information returned by {@link PFrame.listColumns} method */\nexport interface PColumnInfo extends PColumnIdAndSpec {\n  /** True if data was associated with this PColumn */\n  readonly hasData: boolean;\n}\n\nexport interface AxisId {\n  /** Type of the axis or column value. For an axis should not use non-key\n   * types like float or double. */\n  readonly type: ValueType;\n\n  /** Name of the axis or column */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis or column name and type to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n}\n\n/** Array of axis ids */\nexport type AxesId = AxisId[];\n\n/** Extracts axis ids from axis spec */\nexport function getAxisId(spec: AxisSpec): AxisId {\n  const { type, name, domain } = spec;\n  const result = { type, name };\n  if (domain && Object.entries(domain).length > 0) {\n    Object.assign(result, { domain });\n  }\n  return result;\n}\n\n/** Extracts axes ids from axes spec array from column spec */\nexport function getAxesId(spec: AxesSpec): AxesId {\n  return spec.map(getAxisId);\n}\n\n/** Canonicalizes axis id */\nexport function canonicalizeAxisId(id: AxisId): CanonicalizedJson<AxisId> {\n  return canonicalizeJson(getAxisId(id));\n}\n\n/** Returns true 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+{"version":3,"file":"spec.cjs","sources":["../../../../src/drivers/pframe/spec/spec.ts"],"sourcesContent":["import { ensureError } from '../../../errors';\nimport {\n  canonicalizeJson,\n  type CanonicalizedJson,\n  type StringifiedJson,\n} from '../../../json';\nimport type {\n  PObject,\n  PObjectId,\n  PObjectSpec,\n} from '../../../pool';\nimport { z } from 'zod';\n\nexport const ValueType = {\n  Int: 'Int',\n  Long: 'Long',\n  Float: 'Float',\n  Double: 'Double',\n  String: 'String',\n  Bytes: 'Bytes',\n} as const;\n\n/** PFrame columns and axes within them may store one of these types. */\nexport type ValueType = (typeof ValueType)[keyof typeof ValueType];\n\nexport type Metadata = Record<string, string>;\n\nexport function readMetadata<U extends Metadata, T extends keyof U = keyof U>(\n  metadata: Metadata | undefined,\n  key: T,\n): U[T] | undefined {\n  return (metadata as U | undefined)?.[key];\n}\n\ntype MetadataJsonImpl<M> = {\n  [P in keyof M as (M[P] extends StringifiedJson ? P : never)]: M[P] extends StringifiedJson<infer U> ? z.ZodType<U> : never;\n};\nexport type MetadataJson<M> = MetadataJsonImpl<Required<M>>;\n\nexport function readMetadataJsonOrThrow<M extends Metadata, T extends keyof MetadataJson<M>>(\n  metadata: Metadata | undefined,\n  metadataJson: MetadataJson<M>,\n  key: T,\n  methodNameInError: string = 'readMetadataJsonOrThrow',\n): z.infer<MetadataJson<M>[T]> | undefined {\n  const json = readMetadata<M, T>(metadata, key);\n  if (json === undefined) return undefined;\n\n  const schema = metadataJson[key];\n  try {\n    const value = JSON.parse(json);\n    return schema.parse(value);\n  } catch (error: unknown) {\n    throw new Error(\n      `${methodNameInError} failed, `\n      + `key: ${String(key)}, `\n      + `value: ${json}, `\n      + `error: ${ensureError(error)}`,\n    );\n  }\n}\n\nexport function readMetadataJson<M extends Metadata, T extends keyof MetadataJson<M>>(\n  metadata: Metadata | undefined,\n  metadataJson: MetadataJson<M>,\n  key: T,\n): z.infer<MetadataJson<M>[T]> | undefined {\n  try {\n    return readMetadataJsonOrThrow(metadata, metadataJson, key);\n  } catch {\n    return undefined; // treat invalid values as unset\n  }\n}\n\n/// Well-known domains\nexport const Domain = {\n  Alphabet: 'pl7.app/alphabet',\n  BlockId: 'pl7.app/blockId',\n} as const;\n\nexport type Domain = Metadata & Partial<{\n  [Domain.Alphabet]: 'nucleotide' | 'aminoacid' | string;\n  [Domain.BlockId]: string;\n}>;\n\nexport type DomainJson = MetadataJson<Domain>;\nexport const DomainJson: DomainJson = {};\n\n/// Helper function for reading plain domain values\nexport function readDomain<T extends keyof Domain>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): Domain[T] | undefined {\n  return readMetadata<Domain, T>(spec?.domain, key);\n}\n\n/// Helper function for reading json-encoded domain values, throws on JSON parsing error\nexport function readDomainJsonOrThrow<T extends keyof DomainJson>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<DomainJson[T]> | undefined {\n  return readMetadataJsonOrThrow<Domain, T>(spec?.domain, DomainJson, key, 'readDomainJsonOrThrow');\n}\n\n/// Helper function for reading json-encoded domain values, returns undefined on JSON parsing error\nexport function readDomainJson<T extends keyof DomainJson>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<DomainJson[T]> | undefined {\n  return readMetadataJson<Domain, T>(spec?.domain, DomainJson, key);\n}\n\n/// Well-known annotations\nexport const Annotation = {\n  AxisNature: 'pl7.app/axisNature',\n  Alphabet: 'pl7.app/alphabet',\n  Description: 'pl7.app/description',\n  DiscreteValues: 'pl7.app/discreteValues',\n  Format: 'pl7.app/format',\n  Graph: {\n    Axis: {\n      HighCardinality: 'pl7.app/graph/axis/highCardinality',\n      LowerLimit: 'pl7.app/graph/axis/lowerLimit',\n      SymmetricRange: 'pl7.app/graph/axis/symmetricRange',\n      UpperLimit: 'pl7.app/graph/axis/upperLimit',\n    },\n    IsDenseAxis: 'pl7.app/graph/isDenseAxis',\n    IsVirtual: 'pl7.app/graph/isVirtual',\n    Palette: 'pl7.app/graph/palette',\n    Thresholds: 'pl7.app/graph/thresholds',\n    TreatAbsentValuesAs: 'pl7.app/graph/treatAbsentValuesAs',\n  },\n  HideDataFromUi: 'pl7.app/hideDataFromUi',\n  HideDataFromGraphs: 'pl7.app/hideDataFromGraphs',\n  IsDiscreteFilter: 'pl7.app/isDiscreteFilter',\n  IsLinkerColumn: 'pl7.app/isLinkerColumn',\n  IsSubset: 'pl7.app/isSubset',\n  Label: 'pl7.app/label',\n  Max: 'pl7.app/max',\n  Min: 'pl7.app/min',\n  MultipliesBy: 'pl7.app/multipliesBy',\n  Parents: 'pl7.app/parents',\n  Sequence: {\n    Annotation: {\n      Mapping: 'pl7.app/sequence/annotation/mapping',\n    },\n    IsAnnotation: 'pl7.app/sequence/isAnnotation',\n  },\n  Table: {\n    FontFamily: 'pl7.app/table/fontFamily',\n    OrderPriority: 'pl7.app/table/orderPriority',\n    Visibility: 'pl7.app/table/visibility',\n  },\n  Trace: 'pl7.app/trace',\n} as const;\n\nexport type Annotation = Metadata & Partial<{\n  [Annotation.Alphabet]: 'nucleotide' | 'aminoacid' | string;\n  [Annotation.AxisNature]: 'homogeneous' | 'heterogeneous' | 'scaleCompatible' | string;\n  [Annotation.Description]: string;\n  [Annotation.DiscreteValues]: StringifiedJson<number[]> | StringifiedJson<string[]>;\n  [Annotation.Format]: string;\n  [Annotation.Graph.Axis.HighCardinality]: StringifiedJson<boolean>;\n  [Annotation.Graph.Axis.LowerLimit]: StringifiedJson<number>;\n  [Annotation.Graph.Axis.SymmetricRange]: StringifiedJson<boolean>;\n  [Annotation.Graph.Axis.UpperLimit]: StringifiedJson<number>;\n  [Annotation.Graph.IsDenseAxis]: StringifiedJson<boolean>;\n  [Annotation.Graph.IsVirtual]: StringifiedJson<boolean>;\n  [Annotation.Graph.Palette]: StringifiedJson<{ mapping: Record<string, number>; name: string }>;\n  [Annotation.Graph.Thresholds]: StringifiedJson<{ columnId: { valueType: ValueType; name: string }; value: number }[]>;\n  [Annotation.Graph.TreatAbsentValuesAs]: StringifiedJson<number>;\n  [Annotation.HideDataFromUi]: StringifiedJson<boolean>;\n  [Annotation.HideDataFromGraphs]: StringifiedJson<boolean>;\n  [Annotation.IsDiscreteFilter]: StringifiedJson<boolean>;\n  [Annotation.IsLinkerColumn]: StringifiedJson<boolean>;\n  [Annotation.IsSubset]: StringifiedJson<boolean>;\n  [Annotation.Label]: string;\n  [Annotation.Max]: StringifiedJson<number>;\n  [Annotation.Min]: StringifiedJson<number>;\n  [Annotation.MultipliesBy]: StringifiedJson<AxisSpec['name'][]>;\n  [Annotation.Parents]: StringifiedJson<AxisSpec['name'][]>;\n  [Annotation.Sequence.Annotation.Mapping]: StringifiedJson<Record<string, string>>;\n  [Annotation.Sequence.IsAnnotation]: StringifiedJson<boolean>;\n  [Annotation.Table.FontFamily]: string;\n  [Annotation.Table.OrderPriority]: StringifiedJson<number>;\n  [Annotation.Table.Visibility]: 'hidden' | 'optional' | string;\n  [Annotation.Trace]: StringifiedJson<Record<string, unknown>>;\n}>;\n\n// export const AxisSpec = z.object({\n//   type: z.nativeEnum(ValueType),\n//   name: z.string(),\n//   domain: z.record(z.string(), z.string()).optional(),\n//   annotations: z.record(z.string(), z.string()).optional(),\n//   parentAxes: z.array(z.number()).optional(),\n// }).passthrough();\n//\n// type Expect<T extends true> = T;\n// type Equal<X, Y> =\n// (<T>() => T extends X ? 1 : 2) extends (<T>() => T extends Y ? 1 : 2) ? true : false;\n//\n// type _test = Expect<Equal<\n//   Readonly<z.infer<typeof AxisSpec>>,\n//   Readonly<AxisSpec & Record<string, unknown>>\n// >>;\n\nexport type AnnotationJson = MetadataJson<Annotation>;\n\nconst ValueTypeSchema = z.enum(['Int', 'Long', 'Float', 'Double', 'String'] as const);\nexport const AnnotationJson: AnnotationJson = {\n  [Annotation.DiscreteValues]: z.array(z.string()).or(z.array(z.number())),\n  [Annotation.Graph.Axis.HighCardinality]: z.boolean(),\n  [Annotation.Graph.Axis.LowerLimit]: z.number(),\n  [Annotation.Graph.Axis.UpperLimit]: z.number(),\n  [Annotation.Graph.Axis.SymmetricRange]: z.boolean(),\n  [Annotation.Graph.IsDenseAxis]: z.boolean(),\n  [Annotation.Graph.Palette]: z.object({ mapping: z.record(z.number()), name: z.string() }),\n  [Annotation.Graph.Thresholds]: z.array(\n    z.object({\n      columnId: z.object({ valueType: ValueTypeSchema, name: z.string() }),\n      value: z.number(),\n    }),\n  ),\n  [Annotation.Graph.TreatAbsentValuesAs]: z.number(),\n  [Annotation.Graph.IsVirtual]: z.boolean(),\n  [Annotation.HideDataFromUi]: z.boolean(),\n  [Annotation.HideDataFromGraphs]: z.boolean(),\n  [Annotation.IsDiscreteFilter]: z.boolean(),\n  [Annotation.IsLinkerColumn]: z.boolean(),\n  [Annotation.IsSubset]: z.boolean(),\n  [Annotation.Max]: z.number(),\n  [Annotation.Min]: z.number(),\n  [Annotation.MultipliesBy]: z.array(z.string()),\n  [Annotation.Parents]: z.array(z.string()),\n  [Annotation.Sequence.Annotation.Mapping]: z.record(z.string(), z.string()),\n  [Annotation.Sequence.IsAnnotation]: z.boolean(),\n  [Annotation.Table.OrderPriority]: z.number(),\n  [Annotation.Trace]: z.record(z.string(), z.unknown()),\n};\n\n/// Helper function for reading plain annotation values\nexport function readAnnotation<T extends keyof Annotation>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): Annotation[T] | undefined {\n  return readMetadata<Annotation, T>(spec?.annotations, key);\n}\n\n/// Helper function for reading json-encoded annotation values, throws on JSON parsing error\nexport function readAnnotationJsonOrThrow<T extends keyof AnnotationJson>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<AnnotationJson[T]> | undefined {\n  return readMetadataJsonOrThrow<Annotation, T>(spec?.annotations, AnnotationJson, key, 'readAnnotationJsonOrThrow');\n}\n\n/// Helper function for reading json-encoded annotation values, returns undefined on JSON parsing error\nexport function readAnnotationJson<T extends keyof AnnotationJson>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<AnnotationJson[T]> | undefined {\n  return readMetadataJson<Annotation, T>(spec?.annotations, AnnotationJson, key);\n}\n\n/**\n * Specification of an individual axis.\n *\n * Each axis is a part of a composite key that addresses data inside the PColumn.\n *\n * Each record inside a PColumn is addressed by a unique tuple of values set for\n * all the axes specified in the column spec.\n */\nexport type AxisSpec = {\n  /** Type of the axis value. Should not use non-key types like float or double. */\n  readonly type: ValueType;\n\n  /** Name of the axis */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** Any additional information attached to the axis that does not affect its\n   * identifier */\n  readonly annotations?: Record<string, string>;\n\n  /**\n   * Parent axes provide contextual grouping for the axis in question, establishing\n   * a hierarchy where the current axis is dependent on one or more axes for its\n   * full definition and meaning. For instance, in a data structure where each\n   * \"container\" axis may contain multiple \"item\" axes, the `item` axis would\n   * list the index of the `container` axis in this field to denote its dependency.\n   *\n   * This means that the identity or significance of the `item` axis is only\n   * interpretable when combined with its parent `container` axis. An `item` axis\n   * index by itself may be non-unique and only gains uniqueness within the context\n   * of its parent `container`. Therefore, the `parentAxes` field is essential for\n   * mapping these relationships and ensuring data coherence across nested or\n   * multi-level data models.\n   *\n   * A list of zero-based indices of parent axes in the overall axes specification\n   * from the column spec. Each index corresponds to the position of a parent axis\n   * in the list that defines the structure of the data model.\n   */\n  readonly parentAxes?: number[];\n};\n\n/** Parents are specs, not indexes; normalized axis can be used considering its parents independently from column */\nexport interface AxisSpecNormalized extends Omit<AxisSpec, 'parentAxes'> {\n  parentAxesSpec: AxisSpecNormalized[];\n}\n\n/** Tree: axis is a root, its parents are children */\nexport type AxisTree = {\n  axis: AxisSpecNormalized;\n  children: AxisTree[]; // parents\n};\n\nfunction makeAxisTree(axis: AxisSpecNormalized): AxisTree {\n  return { axis, children: [] };\n}\n\n/** Build tree by axis parents annotations */\nexport function getAxesTree(rootAxis: AxisSpecNormalized): AxisTree {\n  const root = makeAxisTree(rootAxis);\n  let nodesQ = [root];\n  while (nodesQ.length) {\n    const nextNodes: AxisTree[] = [];\n    for (const node of nodesQ) {\n      node.children = node.axis.parentAxesSpec.map(makeAxisTree);\n      nextNodes.push(...node.children);\n    }\n    nodesQ = nextNodes;\n  }\n  return root;\n}\n\n/** Get set of canonicalized axisIds from axisTree */\nexport function getSetFromAxisTree(tree: AxisTree): Set<CanonicalizedJson<AxisId>> {\n  const set = new Set([canonicalizeJson(getAxisId(tree.axis))]);\n  let nodesQ = [tree];\n  while (nodesQ.length) {\n    const nextNodes = [];\n    for (const node of nodesQ) {\n      for (const parent of node.children) {\n        set.add(canonicalizeJson(getAxisId(parent.axis)));\n        nextNodes.push(parent);\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return set;\n}\n\n/** Get array of axisSpecs from axisTree */\nexport function getArrayFromAxisTree(tree: AxisTree): AxisSpecNormalized[] {\n  const res = [tree.axis];\n  let nodesQ = [tree];\n  while (nodesQ.length) {\n    const nextNodes = [];\n    for (const node of nodesQ) {\n      for (const parent of node.children) {\n        res.push(parent.axis);\n        nextNodes.push(parent);\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return res;\n}\n\nexport function canonicalizeAxisWithParents(axis: AxisSpecNormalized) {\n  return canonicalizeJson(getArrayFromAxisTree(getAxesTree(axis)).map(getAxisId));\n}\n\nfunction normalizingAxesComparator(axis1: AxisSpecNormalized, axis2: AxisSpecNormalized): 1 | -1 | 0 {\n  if (axis1.name !== axis2.name) {\n    return axis1.name < axis2.name ? 1 : -1;\n  }\n  if (axis1.type !== axis2.type) {\n    return axis1.type < axis2.type ? 1 : -1;\n  }\n  const domain1 = canonicalizeJson(axis1.domain ?? {});\n  const domain2 = canonicalizeJson(axis2.domain ?? {});\n  if (domain1 !== domain2) {\n    return domain1 < domain2 ? 1 : -1;\n  }\n\n  const parents1 = canonicalizeAxisWithParents(axis1);\n  const parents2 = canonicalizeAxisWithParents(axis2);\n\n  if (parents1 !== parents2) {\n    return parents1 < parents2 ? 1 : -1;\n  }\n\n  const annotation1 = canonicalizeJson(axis1.annotations ?? {});\n  const annotation2 = canonicalizeJson(axis2.annotations ?? {});\n  if (annotation1 !== annotation2) {\n    return annotation1 < annotation2 ? 1 : -1;\n  }\n  return 0;\n}\n\nfunction parseParentsFromAnnotations(axis: AxisSpec) {\n  const parentsList = readAnnotationJson(axis, Annotation.Parents);\n  if (parentsList === undefined) {\n    return [];\n  }\n  return parentsList;\n}\n\nfunction sortParentsDeep(axisSpec: AxisSpecNormalized) {\n  axisSpec.parentAxesSpec.forEach(sortParentsDeep);\n  axisSpec.parentAxesSpec.sort(normalizingAxesComparator);\n}\n\nfunction hasCycleOfParents(axisSpec: AxisSpecNormalized) {\n  const root = makeAxisTree(axisSpec);\n  let nodesQ = [root];\n  const ancestors = new Set(canonicalizeJson(getAxisId(axisSpec)));\n  while (nodesQ.length) {\n    const nextNodes: AxisTree[] = [];\n    const levelIds = new Set<CanonicalizedJson<AxisId>>();\n    for (const node of nodesQ) {\n      node.children = node.axis.parentAxesSpec.map(makeAxisTree);\n      for (const child of node.children) {\n        const childId = canonicalizeJson(getAxisId(child.axis));\n        if (!levelIds.has(childId)) {\n          nextNodes.push(child);\n          levelIds.add(childId);\n          if (ancestors.has(childId)) {\n            return true;\n          }\n          ancestors.add(childId);\n        }\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return false;\n}\n\n/** Create list of normalized axisSpec (parents are in array of specs, not indexes) */\nexport function getNormalizedAxesList(axes: AxisSpec[]): AxisSpecNormalized[] {\n  if (!axes.length) {\n    return [];\n  }\n  const modifiedAxes: AxisSpecNormalized[] = axes.map((axis) => {\n    const { parentAxes: _, ...copiedRest } = axis;\n    return { ...copiedRest, annotations: { ...copiedRest.annotations }, parentAxesSpec: [] };\n  });\n\n  axes.forEach((axis, idx) => {\n    const modifiedAxis = modifiedAxes[idx];\n    if (axis.parentAxes) { // if we have parents by indexes then take from the list\n      modifiedAxis.parentAxesSpec = axis.parentAxes.map((idx) => modifiedAxes[idx]);\n    } else { // else try to parse from annotation name\n      const parents = parseParentsFromAnnotations(axis).map((name) => modifiedAxes.find((axis) => axis.name === name));\n      modifiedAxis.parentAxesSpec = parents.some((p) => p === undefined) ? [] : parents as AxisSpecNormalized[];\n\n      delete modifiedAxis.annotations?.[Annotation.Parents];\n    }\n  });\n\n  if (modifiedAxes.some(hasCycleOfParents)) { // Axes list is broken\n    modifiedAxes.forEach((axis) => {\n      axis.parentAxesSpec = [];\n    });\n  } else {\n    modifiedAxes.forEach((axis) => {\n      sortParentsDeep(axis);\n    });\n  }\n\n  return modifiedAxes;\n}\n\n/** Create list of regular axisSpec from normalized (parents are indexes, inside of current axes list) */\nexport function getDenormalizedAxesList(axesSpec: AxisSpecNormalized[]): AxisSpec[] {\n  const idsList = axesSpec.map((axisSpec) => canonicalizeJson(getAxisId(axisSpec)));\n  return axesSpec.map((axisSpec) => {\n    const parentsIds = axisSpec.parentAxesSpec.map((axisSpec) => canonicalizeJson(getAxisId(axisSpec)));\n    const parentIdxs = parentsIds.map((id) => idsList.indexOf(id));\n    const { parentAxesSpec: _, ...copiedRest } = axisSpec;\n    if (parentIdxs.length) {\n      return { ...copiedRest, parentAxes: parentIdxs } as AxisSpec;\n    }\n    return copiedRest;\n  });\n}\n\n/** Common type representing spec for all the axes in a column */\nexport type AxesSpec = AxisSpec[];\n\n/// Well-known column names\nexport const PColumnName = {\n  Label: 'pl7.app/label',\n  Table: {\n    RowSelection: 'pl7.app/table/row-selection',\n  },\n} as const;\n\n/**\n * Full column specification including all axes specs and specs of the column\n * itself.\n *\n * A PColumn in its essence represents a mapping from a fixed size, explicitly\n * typed tuple to an explicitly typed value.\n *\n * (axis1Value1, axis2Value1, ...) -> columnValue\n *\n * Each element in tuple correspond to the axis having the same index in axesSpec.\n */\nexport type PUniversalColumnSpec = PObjectSpec & {\n  /** Defines specific type of BObject, the most generic type of unit of\n   * information in Platforma Project. */\n  readonly kind: 'PColumn';\n\n  /** Type of column values */\n  readonly valueType: string;\n\n  /** Column name */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** Any additional information attached to the column that does not affect its\n   * identifier */\n  readonly annotations?: Record<string, string>;\n\n  /** A list of zero-based indices of parent axes from the {@link axesSpec} array. */\n  readonly parentAxes?: number[];\n\n  /** Axes specifications */\n  readonly axesSpec: AxesSpec;\n};\n\n/**\n * Specification of a data column.\n *\n * Data column is a specialized type of PColumn that stores only simple values (strings and numbers)\n * addressed by multiple keys. This is in contrast to other PColumn variants that can store more complex\n * values like files or other abstract data types. Data columns are optimized for storing and processing\n * basic tabular data.\n */\nexport type PDataColumnSpec = PUniversalColumnSpec & {\n  /** Type of column values */\n  readonly valueType: ValueType;\n};\n\n// @todo: change this to PUniversalColumnSpec\nexport type PColumnSpec = PDataColumnSpec;\n\n/** Unique PColumnSpec identifier */\nexport type PColumnSpecId = {\n  /** Defines specific type of BObject, the most generic type of unit of\n   * information in Platforma Project. */\n  readonly kind: 'PColumn';\n\n  /** Type of column values */\n  readonly valueType: ValueType;\n\n  /** Column name */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** A list of zero-based indices of parent axes from the {@link axesSpec} array. */\n  readonly parentAxes?: number[];\n\n  /** Axes id */\n  readonly axesId: AxesId;\n};\n\nexport function getPColumnSpecId(spec: PColumnSpec): PColumnSpecId {\n  return {\n    kind: spec.kind,\n    valueType: spec.valueType,\n    name: spec.name,\n    domain: spec.domain,\n    parentAxes: spec.parentAxes,\n    axesId: getAxesId(spec.axesSpec),\n  };\n}\n\nexport interface PColumn<Data> extends PObject<Data> {\n  /** PColumn spec, allowing it to be found among other PObjects */\n  readonly spec: PColumnSpec;\n}\n\n/** Columns in a PFrame also have internal identifier, this object represents\n * combination of specs and such id */\nexport interface PColumnIdAndSpec {\n  /** Internal column id within the PFrame */\n  readonly columnId: PObjectId;\n\n  /** Column spec */\n  readonly spec: PColumnSpec;\n}\n\n/** Get column id and spec from a column */\nexport function getColumnIdAndSpec<Data>(column: PColumn<Data>): PColumnIdAndSpec {\n  return {\n    columnId: column.id,\n    spec: column.spec,\n  };\n}\n\n/** Information returned by {@link PFrame.listColumns} method */\nexport interface PColumnInfo extends PColumnIdAndSpec {\n  /** True if data was associated with this PColumn */\n  readonly hasData: boolean;\n}\n\nexport interface AxisId {\n  /** Type of the axis or column value. For an axis should not use non-key\n   * types like float or double. */\n  readonly type: ValueType;\n\n  /** Name of the axis or column */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis or column name and type to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n}\n\n/** Array of axis ids */\nexport type AxesId = AxisId[];\n\n/** Extracts axis ids from axis spec */\nexport function getAxisId(spec: AxisSpec): AxisId {\n  const { type, name, domain } = spec;\n  const result = { type, name };\n  if (domain && Object.entries(domain).length > 0) {\n    Object.assign(result, { domain });\n  }\n  return result;\n}\n\n/** Extracts axes ids from axes spec array from column spec */\nexport function getAxesId(spec: AxesSpec): AxesId {\n  return spec.map(getAxisId);\n}\n\n/** Canonicalizes axis id */\nexport function canonicalizeAxisId(id: AxisId): CanonicalizedJson<AxisId> {\n  return canonicalizeJson(getAxisId(id));\n}\n\n/** Returns true if all domains from query are found in target */\nfunction matchDomain(query?: Record<string, string>, target?: Record<string, string>) {\n  if (query === undefined) return target === undefined;\n  if (target === undefined) return true;\n  for (const k in target) {\n    if (query[k] !== target[k]) return false;\n  }\n  return true;\n}\n\n/** Returns whether \"match\" axis id is compatible with the \"query\" */\nexport function matchAxisId(query: AxisId, target: AxisId): boolean {\n  return query.name === target.name && matchDomain(query.domain, 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package/dist/drivers/pframe/spec/spec.d.ts

@@ -140,7 +140,7 @@ export declare function readAnnotationJson<T extends keyof AnnotationJson>(spec:
  * Each record inside a PColumn is addressed by a unique tuple of values set for
  * all the axes specified in the column spec.
  */
-export interface AxisSpec {
+export type AxisSpec = {
     /** Type of the axis value. Should not use non-key types like float or double. */
     readonly type: ValueType;
     /** Name of the axis */
@@ -170,7 +170,7 @@ export interface AxisSpec {
      * in the list that defines the structure of the data model.
      */
     readonly parentAxes?: number[];
-}
+};
 /** Parents are specs, not indexes; normalized axis can be used considering its parents independently from column */
 export interface AxisSpecNormalized extends Omit<AxisSpec, 'parentAxes'> {
     parentAxesSpec: AxisSpecNormalized[];
@@ -212,7 +212,7 @@ export declare const PColumnName: {
  *
  * Each element in tuple correspond to the axis having the same index in axesSpec.
  */
-export interface PUniversalColumnSpec extends PObjectSpec {
+export type PUniversalColumnSpec = PObjectSpec & {
     /** Defines specific type of BObject, the most generic type of unit of
      * information in Platforma Project. */
     readonly kind: 'PColumn';
@@ -230,7 +230,7 @@ export interface PUniversalColumnSpec extends PObjectSpec {
     readonly parentAxes?: number[];
     /** Axes specifications */
     readonly axesSpec: AxesSpec;
-}
+};
 /**
  * Specification of a data column.
  *
@@ -239,10 +239,10 @@ export interface PUniversalColumnSpec extends PObjectSpec {
  * values like files or other abstract data types. Data columns are optimized for storing and processing
  * basic tabular data.
  */
-export interface PDataColumnSpec extends PUniversalColumnSpec {
+export type PDataColumnSpec = PUniversalColumnSpec & {
     /** Type of column values */
     readonly valueType: ValueType;
-}
+};
 export type PColumnSpec = PDataColumnSpec;
 /** Unique PColumnSpec identifier */
 export type PColumnSpecId = {

package/dist/drivers/pframe/spec/spec.d.ts.map

@@ -1 +1 @@
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package/dist/drivers/pframe/spec/spec.js.map

@@ -1 +1 @@
-{"version":3,"file":"spec.js","sources":["../../../../src/drivers/pframe/spec/spec.ts"],"sourcesContent":["import { ensureError } from '../../../errors';\nimport {\n  canonicalizeJson,\n  type CanonicalizedJson,\n  type StringifiedJson,\n} from '../../../json';\nimport type {\n  PObject,\n  PObjectId,\n  PObjectSpec,\n} from '../../../pool';\nimport { z } from 'zod';\n\nexport const ValueType = {\n  Int: 'Int',\n  Long: 'Long',\n  Float: 'Float',\n  Double: 'Double',\n  String: 'String',\n  Bytes: 'Bytes',\n} as const;\n\n/** PFrame columns and axes within them may store one of these types. */\nexport type ValueType = (typeof ValueType)[keyof typeof ValueType];\n\nexport type Metadata = Record<string, string>;\n\nexport function readMetadata<U extends Metadata, T extends keyof U = keyof U>(\n  metadata: Metadata | undefined,\n  key: T,\n): U[T] | undefined {\n  return (metadata as U | undefined)?.[key];\n}\n\ntype MetadataJsonImpl<M> = {\n  [P in keyof M as (M[P] extends StringifiedJson ? P : never)]: M[P] extends StringifiedJson<infer U> ? z.ZodType<U> : never;\n};\nexport type MetadataJson<M> = MetadataJsonImpl<Required<M>>;\n\nexport function readMetadataJsonOrThrow<M extends Metadata, T extends keyof MetadataJson<M>>(\n  metadata: Metadata | undefined,\n  metadataJson: MetadataJson<M>,\n  key: T,\n  methodNameInError: string = 'readMetadataJsonOrThrow',\n): z.infer<MetadataJson<M>[T]> | undefined {\n  const json = readMetadata<M, T>(metadata, key);\n  if (json === undefined) return undefined;\n\n  const schema = metadataJson[key];\n  try {\n    const value = JSON.parse(json);\n    return schema.parse(value);\n  } catch (error: unknown) {\n    throw new Error(\n      `${methodNameInError} failed, `\n      + `key: ${String(key)}, `\n      + `value: ${json}, `\n      + `error: ${ensureError(error)}`,\n    );\n  }\n}\n\nexport function readMetadataJson<M extends Metadata, T extends keyof MetadataJson<M>>(\n  metadata: Metadata | undefined,\n  metadataJson: MetadataJson<M>,\n  key: T,\n): z.infer<MetadataJson<M>[T]> | undefined {\n  try {\n    return readMetadataJsonOrThrow(metadata, metadataJson, key);\n  } catch {\n    return undefined; // treat invalid values as unset\n  }\n}\n\n/// Well-known domains\nexport const Domain = {\n  Alphabet: 'pl7.app/alphabet',\n  BlockId: 'pl7.app/blockId',\n} as const;\n\nexport type Domain = Metadata & Partial<{\n  [Domain.Alphabet]: 'nucleotide' | 'aminoacid' | string;\n  [Domain.BlockId]: string;\n}>;\n\nexport type DomainJson = MetadataJson<Domain>;\nexport const DomainJson: DomainJson = {};\n\n/// Helper function for reading plain domain values\nexport function readDomain<T extends keyof Domain>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): Domain[T] | undefined {\n  return readMetadata<Domain, T>(spec?.domain, key);\n}\n\n/// Helper function for reading json-encoded domain values, throws on JSON parsing error\nexport function readDomainJsonOrThrow<T extends keyof DomainJson>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<DomainJson[T]> | undefined {\n  return readMetadataJsonOrThrow<Domain, T>(spec?.domain, DomainJson, key, 'readDomainJsonOrThrow');\n}\n\n/// Helper function for reading json-encoded domain values, returns undefined on JSON parsing error\nexport function readDomainJson<T extends keyof DomainJson>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<DomainJson[T]> | undefined {\n  return readMetadataJson<Domain, T>(spec?.domain, DomainJson, key);\n}\n\n/// Well-known annotations\nexport const Annotation = {\n  AxisNature: 'pl7.app/axisNature',\n  Alphabet: 'pl7.app/alphabet',\n  Description: 'pl7.app/description',\n  DiscreteValues: 'pl7.app/discreteValues',\n  Format: 'pl7.app/format',\n  Graph: {\n    Axis: {\n      HighCardinality: 'pl7.app/graph/axis/highCardinality',\n      LowerLimit: 'pl7.app/graph/axis/lowerLimit',\n      SymmetricRange: 'pl7.app/graph/axis/symmetricRange',\n      UpperLimit: 'pl7.app/graph/axis/upperLimit',\n    },\n    IsDenseAxis: 'pl7.app/graph/isDenseAxis',\n    IsVirtual: 'pl7.app/graph/isVirtual',\n    Palette: 'pl7.app/graph/palette',\n    Thresholds: 'pl7.app/graph/thresholds',\n    TreatAbsentValuesAs: 'pl7.app/graph/treatAbsentValuesAs',\n  },\n  HideDataFromUi: 'pl7.app/hideDataFromUi',\n  HideDataFromGraphs: 'pl7.app/hideDataFromGraphs',\n  IsDiscreteFilter: 'pl7.app/isDiscreteFilter',\n  IsLinkerColumn: 'pl7.app/isLinkerColumn',\n  IsSubset: 'pl7.app/isSubset',\n  Label: 'pl7.app/label',\n  Max: 'pl7.app/max',\n  Min: 'pl7.app/min',\n  MultipliesBy: 'pl7.app/multipliesBy',\n  Parents: 'pl7.app/parents',\n  Sequence: {\n    Annotation: {\n      Mapping: 'pl7.app/sequence/annotation/mapping',\n    },\n    IsAnnotation: 'pl7.app/sequence/isAnnotation',\n  },\n  Table: {\n    FontFamily: 'pl7.app/table/fontFamily',\n    OrderPriority: 'pl7.app/table/orderPriority',\n    Visibility: 'pl7.app/table/visibility',\n  },\n  Trace: 'pl7.app/trace',\n} as const;\n\nexport type Annotation = Metadata & Partial<{\n  [Annotation.Alphabet]: 'nucleotide' | 'aminoacid' | string;\n  [Annotation.AxisNature]: 'homogeneous' | 'heterogeneous' | 'scaleCompatible' | string;\n  [Annotation.Description]: string;\n  [Annotation.DiscreteValues]: StringifiedJson<number[]> | StringifiedJson<string[]>;\n  [Annotation.Format]: string;\n  [Annotation.Graph.Axis.HighCardinality]: StringifiedJson<boolean>;\n  [Annotation.Graph.Axis.LowerLimit]: StringifiedJson<number>;\n  [Annotation.Graph.Axis.SymmetricRange]: StringifiedJson<boolean>;\n  [Annotation.Graph.Axis.UpperLimit]: StringifiedJson<number>;\n  [Annotation.Graph.IsDenseAxis]: StringifiedJson<boolean>;\n  [Annotation.Graph.IsVirtual]: StringifiedJson<boolean>;\n  [Annotation.Graph.Palette]: StringifiedJson<{ mapping: Record<string, number>; name: string }>;\n  [Annotation.Graph.Thresholds]: StringifiedJson<{ columnId: { valueType: ValueType; name: string }; value: number }[]>;\n  [Annotation.Graph.TreatAbsentValuesAs]: StringifiedJson<number>;\n  [Annotation.HideDataFromUi]: StringifiedJson<boolean>;\n  [Annotation.HideDataFromGraphs]: StringifiedJson<boolean>;\n  [Annotation.IsDiscreteFilter]: StringifiedJson<boolean>;\n  [Annotation.IsLinkerColumn]: StringifiedJson<boolean>;\n  [Annotation.IsSubset]: StringifiedJson<boolean>;\n  [Annotation.Label]: string;\n  [Annotation.Max]: StringifiedJson<number>;\n  [Annotation.Min]: StringifiedJson<number>;\n  [Annotation.MultipliesBy]: StringifiedJson<AxisSpec['name'][]>;\n  [Annotation.Parents]: StringifiedJson<AxisSpec['name'][]>;\n  [Annotation.Sequence.Annotation.Mapping]: StringifiedJson<Record<string, string>>;\n  [Annotation.Sequence.IsAnnotation]: StringifiedJson<boolean>;\n  [Annotation.Table.FontFamily]: string;\n  [Annotation.Table.OrderPriority]: StringifiedJson<number>;\n  [Annotation.Table.Visibility]: 'hidden' | 'optional' | string;\n  [Annotation.Trace]: StringifiedJson<Record<string, unknown>>;\n}>;\n\n// export const AxisSpec = z.object({\n//   type: z.nativeEnum(ValueType),\n//   name: z.string(),\n//   domain: z.record(z.string(), z.string()).optional(),\n//   annotations: z.record(z.string(), z.string()).optional(),\n//   parentAxes: z.array(z.number()).optional(),\n// }).passthrough();\n//\n// type Expect<T extends true> = T;\n// type Equal<X, Y> =\n// (<T>() => T extends X ? 1 : 2) extends (<T>() => T extends Y ? 1 : 2) ? true : false;\n//\n// type _test = Expect<Equal<\n//   Readonly<z.infer<typeof AxisSpec>>,\n//   Readonly<AxisSpec & Record<string, unknown>>\n// >>;\n\nexport type AnnotationJson = MetadataJson<Annotation>;\n\nconst ValueTypeSchema = z.enum(['Int', 'Long', 'Float', 'Double', 'String'] as const);\nexport const AnnotationJson: AnnotationJson = {\n  [Annotation.DiscreteValues]: z.array(z.string()).or(z.array(z.number())),\n  [Annotation.Graph.Axis.HighCardinality]: z.boolean(),\n  [Annotation.Graph.Axis.LowerLimit]: z.number(),\n  [Annotation.Graph.Axis.UpperLimit]: z.number(),\n  [Annotation.Graph.Axis.SymmetricRange]: z.boolean(),\n  [Annotation.Graph.IsDenseAxis]: z.boolean(),\n  [Annotation.Graph.Palette]: z.object({ mapping: z.record(z.number()), name: z.string() }),\n  [Annotation.Graph.Thresholds]: z.array(\n    z.object({\n      columnId: z.object({ valueType: ValueTypeSchema, name: z.string() }),\n      value: z.number(),\n    }),\n  ),\n  [Annotation.Graph.TreatAbsentValuesAs]: z.number(),\n  [Annotation.Graph.IsVirtual]: z.boolean(),\n  [Annotation.HideDataFromUi]: z.boolean(),\n  [Annotation.HideDataFromGraphs]: z.boolean(),\n  [Annotation.IsDiscreteFilter]: z.boolean(),\n  [Annotation.IsLinkerColumn]: z.boolean(),\n  [Annotation.IsSubset]: z.boolean(),\n  [Annotation.Max]: z.number(),\n  [Annotation.Min]: z.number(),\n  [Annotation.MultipliesBy]: z.array(z.string()),\n  [Annotation.Parents]: z.array(z.string()),\n  [Annotation.Sequence.Annotation.Mapping]: z.record(z.string(), z.string()),\n  [Annotation.Sequence.IsAnnotation]: z.boolean(),\n  [Annotation.Table.OrderPriority]: z.number(),\n  [Annotation.Trace]: z.record(z.string(), z.unknown()),\n};\n\n/// Helper function for reading plain annotation values\nexport function readAnnotation<T extends keyof Annotation>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): Annotation[T] | undefined {\n  return readMetadata<Annotation, T>(spec?.annotations, key);\n}\n\n/// Helper function for reading json-encoded annotation values, throws on JSON parsing error\nexport function readAnnotationJsonOrThrow<T extends keyof AnnotationJson>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<AnnotationJson[T]> | undefined {\n  return readMetadataJsonOrThrow<Annotation, T>(spec?.annotations, AnnotationJson, key, 'readAnnotationJsonOrThrow');\n}\n\n/// Helper function for reading json-encoded annotation values, returns undefined on JSON parsing error\nexport function readAnnotationJson<T extends keyof AnnotationJson>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<AnnotationJson[T]> | undefined {\n  return readMetadataJson<Annotation, T>(spec?.annotations, AnnotationJson, key);\n}\n\n/**\n * Specification of an individual axis.\n *\n * Each axis is a part of a composite key that addresses data inside the PColumn.\n *\n * Each record inside a PColumn is addressed by a unique tuple of values set for\n * all the axes specified in the column spec.\n */\nexport interface AxisSpec {\n  /** Type of the axis value. Should not use non-key types like float or double. */\n  readonly type: ValueType;\n\n  /** Name of the axis */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** Any additional information attached to the axis that does not affect its\n   * identifier */\n  readonly annotations?: Record<string, string>;\n\n  /**\n   * Parent axes provide contextual grouping for the axis in question, establishing\n   * a hierarchy where the current axis is dependent on one or more axes for its\n   * full definition and meaning. For instance, in a data structure where each\n   * \"container\" axis may contain multiple \"item\" axes, the `item` axis would\n   * list the index of the `container` axis in this field to denote its dependency.\n   *\n   * This means that the identity or significance of the `item` axis is only\n   * interpretable when combined with its parent `container` axis. An `item` axis\n   * index by itself may be non-unique and only gains uniqueness within the context\n   * of its parent `container`. Therefore, the `parentAxes` field is essential for\n   * mapping these relationships and ensuring data coherence across nested or\n   * multi-level data models.\n   *\n   * A list of zero-based indices of parent axes in the overall axes specification\n   * from the column spec. Each index corresponds to the position of a parent axis\n   * in the list that defines the structure of the data model.\n   */\n  readonly parentAxes?: number[];\n}\n\n/** Parents are specs, not indexes; normalized axis can be used considering its parents independently from column */\nexport interface AxisSpecNormalized extends Omit<AxisSpec, 'parentAxes'> {\n  parentAxesSpec: AxisSpecNormalized[];\n}\n\n/** Tree: axis is a root, its parents are children */\nexport type AxisTree = {\n  axis: AxisSpecNormalized;\n  children: AxisTree[]; // parents\n};\n\nfunction makeAxisTree(axis: AxisSpecNormalized): AxisTree {\n  return { axis, children: [] };\n}\n\n/** Build tree by axis parents annotations */\nexport function getAxesTree(rootAxis: AxisSpecNormalized): AxisTree {\n  const root = makeAxisTree(rootAxis);\n  let nodesQ = [root];\n  while (nodesQ.length) {\n    const nextNodes: AxisTree[] = [];\n    for (const node of nodesQ) {\n      node.children = node.axis.parentAxesSpec.map(makeAxisTree);\n      nextNodes.push(...node.children);\n    }\n    nodesQ = nextNodes;\n  }\n  return root;\n}\n\n/** Get set of canonicalized axisIds from axisTree */\nexport function getSetFromAxisTree(tree: AxisTree): Set<CanonicalizedJson<AxisId>> {\n  const set = new Set([canonicalizeJson(getAxisId(tree.axis))]);\n  let nodesQ = [tree];\n  while (nodesQ.length) {\n    const nextNodes = [];\n    for (const node of nodesQ) {\n      for (const parent of node.children) {\n        set.add(canonicalizeJson(getAxisId(parent.axis)));\n        nextNodes.push(parent);\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return set;\n}\n\n/** Get array of axisSpecs from axisTree */\nexport function getArrayFromAxisTree(tree: AxisTree): AxisSpecNormalized[] {\n  const res = [tree.axis];\n  let nodesQ = [tree];\n  while (nodesQ.length) {\n    const nextNodes = [];\n    for (const node of nodesQ) {\n      for (const parent of node.children) {\n        res.push(parent.axis);\n        nextNodes.push(parent);\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return res;\n}\n\nexport function canonicalizeAxisWithParents(axis: AxisSpecNormalized) {\n  return canonicalizeJson(getArrayFromAxisTree(getAxesTree(axis)).map(getAxisId));\n}\n\nfunction normalizingAxesComparator(axis1: AxisSpecNormalized, axis2: AxisSpecNormalized): 1 | -1 | 0 {\n  if (axis1.name !== axis2.name) {\n    return axis1.name < axis2.name ? 1 : -1;\n  }\n  if (axis1.type !== axis2.type) {\n    return axis1.type < axis2.type ? 1 : -1;\n  }\n  const domain1 = canonicalizeJson(axis1.domain ?? {});\n  const domain2 = canonicalizeJson(axis2.domain ?? {});\n  if (domain1 !== domain2) {\n    return domain1 < domain2 ? 1 : -1;\n  }\n\n  const parents1 = canonicalizeAxisWithParents(axis1);\n  const parents2 = canonicalizeAxisWithParents(axis2);\n\n  if (parents1 !== parents2) {\n    return parents1 < parents2 ? 1 : -1;\n  }\n\n  const annotation1 = canonicalizeJson(axis1.annotations ?? {});\n  const annotation2 = canonicalizeJson(axis2.annotations ?? {});\n  if (annotation1 !== annotation2) {\n    return annotation1 < annotation2 ? 1 : -1;\n  }\n  return 0;\n}\n\nfunction parseParentsFromAnnotations(axis: AxisSpec) {\n  const parentsList = readAnnotationJson(axis, Annotation.Parents);\n  if (parentsList === undefined) {\n    return [];\n  }\n  return parentsList;\n}\n\nfunction sortParentsDeep(axisSpec: AxisSpecNormalized) {\n  axisSpec.parentAxesSpec.forEach(sortParentsDeep);\n  axisSpec.parentAxesSpec.sort(normalizingAxesComparator);\n}\n\nfunction hasCycleOfParents(axisSpec: AxisSpecNormalized) {\n  const root = makeAxisTree(axisSpec);\n  let nodesQ = [root];\n  const ancestors = new Set(canonicalizeJson(getAxisId(axisSpec)));\n  while (nodesQ.length) {\n    const nextNodes: AxisTree[] = [];\n    const levelIds = new Set<CanonicalizedJson<AxisId>>();\n    for (const node of nodesQ) {\n      node.children = node.axis.parentAxesSpec.map(makeAxisTree);\n      for (const child of node.children) {\n        const childId = canonicalizeJson(getAxisId(child.axis));\n        if (!levelIds.has(childId)) {\n          nextNodes.push(child);\n          levelIds.add(childId);\n          if (ancestors.has(childId)) {\n            return true;\n          }\n          ancestors.add(childId);\n        }\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return false;\n}\n\n/** Create list of normalized axisSpec (parents are in array of specs, not indexes) */\nexport function getNormalizedAxesList(axes: AxisSpec[]): AxisSpecNormalized[] {\n  if (!axes.length) {\n    return [];\n  }\n  const modifiedAxes: AxisSpecNormalized[] = axes.map((axis) => {\n    const { parentAxes: _, ...copiedRest } = axis;\n    return { ...copiedRest, annotations: { ...copiedRest.annotations }, parentAxesSpec: [] };\n  });\n\n  axes.forEach((axis, idx) => {\n    const modifiedAxis = modifiedAxes[idx];\n    if (axis.parentAxes) { // if we have parents by indexes then take from the list\n      modifiedAxis.parentAxesSpec = axis.parentAxes.map((idx) => modifiedAxes[idx]);\n    } else { // else try to parse from annotation name\n      const parents = parseParentsFromAnnotations(axis).map((name) => modifiedAxes.find((axis) => axis.name === name));\n      modifiedAxis.parentAxesSpec = parents.some((p) => p === undefined) ? [] : parents as AxisSpecNormalized[];\n\n      delete modifiedAxis.annotations?.[Annotation.Parents];\n    }\n  });\n\n  if (modifiedAxes.some(hasCycleOfParents)) { // Axes list is broken\n    modifiedAxes.forEach((axis) => {\n      axis.parentAxesSpec = [];\n    });\n  } else {\n    modifiedAxes.forEach((axis) => {\n      sortParentsDeep(axis);\n    });\n  }\n\n  return modifiedAxes;\n}\n\n/** Create list of regular axisSpec from normalized (parents are indexes, inside of current axes list) */\nexport function getDenormalizedAxesList(axesSpec: AxisSpecNormalized[]): AxisSpec[] {\n  const idsList = axesSpec.map((axisSpec) => canonicalizeJson(getAxisId(axisSpec)));\n  return axesSpec.map((axisSpec) => {\n    const parentsIds = axisSpec.parentAxesSpec.map((axisSpec) => canonicalizeJson(getAxisId(axisSpec)));\n    const parentIdxs = parentsIds.map((id) => idsList.indexOf(id));\n    const { parentAxesSpec: _, ...copiedRest } = axisSpec;\n    if (parentIdxs.length) {\n      return { ...copiedRest, parentAxes: parentIdxs } as AxisSpec;\n    }\n    return copiedRest;\n  });\n}\n\n/** Common type representing spec for all the axes in a column */\nexport type AxesSpec = AxisSpec[];\n\n/// Well-known column names\nexport const PColumnName = {\n  Label: 'pl7.app/label',\n  Table: {\n    RowSelection: 'pl7.app/table/row-selection',\n  },\n} as const;\n\n/**\n * Full column specification including all axes specs and specs of the column\n * itself.\n *\n * A PColumn in its essence represents a mapping from a fixed size, explicitly\n * typed tuple to an explicitly typed value.\n *\n * (axis1Value1, axis2Value1, ...) -> columnValue\n *\n * Each element in tuple correspond to the axis having the same index in axesSpec.\n */\nexport interface PUniversalColumnSpec extends PObjectSpec {\n  /** Defines specific type of BObject, the most generic type of unit of\n   * information in Platforma Project. */\n  readonly kind: 'PColumn';\n\n  /** Type of column values */\n  readonly valueType: string;\n\n  /** Column name */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** Any additional information attached to the column that does not affect its\n   * identifier */\n  readonly annotations?: Record<string, string>;\n\n  /** A list of zero-based indices of parent axes from the {@link axesSpec} array. */\n  readonly parentAxes?: number[];\n\n  /** Axes specifications */\n  readonly axesSpec: AxesSpec;\n}\n\n/**\n * Specification of a data column.\n *\n * Data column is a specialized type of PColumn that stores only simple values (strings and numbers)\n * addressed by multiple keys. This is in contrast to other PColumn variants that can store more complex\n * values like files or other abstract data types. Data columns are optimized for storing and processing\n * basic tabular data.\n */\nexport interface PDataColumnSpec extends PUniversalColumnSpec {\n  /** Type of column values */\n  readonly valueType: ValueType;\n}\n\n// @todo: change this to PUniversalColumnSpec\nexport type PColumnSpec = PDataColumnSpec;\n\n/** Unique PColumnSpec identifier */\nexport type PColumnSpecId = {\n  /** Defines specific type of BObject, the most generic type of unit of\n   * information in Platforma Project. */\n  readonly kind: 'PColumn';\n\n  /** Type of column values */\n  readonly valueType: ValueType;\n\n  /** Column name */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** A list of zero-based indices of parent axes from the {@link axesSpec} array. */\n  readonly parentAxes?: number[];\n\n  /** Axes id */\n  readonly axesId: AxesId;\n};\n\nexport function getPColumnSpecId(spec: PColumnSpec): PColumnSpecId {\n  return {\n    kind: spec.kind,\n    valueType: spec.valueType,\n    name: spec.name,\n    domain: spec.domain,\n    parentAxes: spec.parentAxes,\n    axesId: getAxesId(spec.axesSpec),\n  };\n}\n\nexport interface PColumn<Data> extends PObject<Data> {\n  /** PColumn spec, allowing it to be found among other PObjects */\n  readonly spec: PColumnSpec;\n}\n\n/** Columns in a PFrame also have internal identifier, this object represents\n * combination of specs and such id */\nexport interface PColumnIdAndSpec {\n  /** Internal column id within the PFrame */\n  readonly columnId: PObjectId;\n\n  /** Column spec */\n  readonly spec: PColumnSpec;\n}\n\n/** Get column id and spec from a column */\nexport function getColumnIdAndSpec<Data>(column: PColumn<Data>): PColumnIdAndSpec {\n  return {\n    columnId: column.id,\n    spec: column.spec,\n  };\n}\n\n/** Information returned by {@link PFrame.listColumns} method */\nexport interface PColumnInfo extends PColumnIdAndSpec {\n  /** True if data was associated with this PColumn */\n  readonly hasData: boolean;\n}\n\nexport interface AxisId {\n  /** Type of the axis or column value. For an axis should not use non-key\n   * types like float or double. */\n  readonly type: ValueType;\n\n  /** Name of the axis or column */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis or column name and type to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n}\n\n/** Array of axis ids */\nexport type AxesId = AxisId[];\n\n/** Extracts axis ids from axis spec */\nexport function getAxisId(spec: AxisSpec): AxisId {\n  const { type, name, domain } = spec;\n  const result = { type, name };\n  if (domain && Object.entries(domain).length > 0) {\n    Object.assign(result, { domain });\n  }\n  return result;\n}\n\n/** Extracts axes ids from axes spec array from column spec */\nexport function getAxesId(spec: AxesSpec): AxesId {\n  return spec.map(getAxisId);\n}\n\n/** Canonicalizes axis id */\nexport function canonicalizeAxisId(id: AxisId): CanonicalizedJson<AxisId> {\n  return canonicalizeJson(getAxisId(id));\n}\n\n/** Returns true if all domains from query are found in target */\nfunction matchDomain(query?: Record<string, string>, target?: Record<string, string>) {\n  if (query === undefined) return target === undefined;\n  if (target === undefined) return true;\n  for (const k in target) {\n    if (query[k] !== target[k]) return false;\n  }\n  return true;\n}\n\n/** Returns whether \"match\" axis id is compatible with the \"query\" */\nexport function matchAxisId(query: AxisId, target: AxisId): boolean {\n  return query.name === target.name && matchDomain(query.domain, 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+{"version":3,"file":"spec.js","sources":["../../../../src/drivers/pframe/spec/spec.ts"],"sourcesContent":["import { ensureError } from '../../../errors';\nimport {\n  canonicalizeJson,\n  type CanonicalizedJson,\n  type StringifiedJson,\n} from '../../../json';\nimport type {\n  PObject,\n  PObjectId,\n  PObjectSpec,\n} from '../../../pool';\nimport { z } from 'zod';\n\nexport const ValueType = {\n  Int: 'Int',\n  Long: 'Long',\n  Float: 'Float',\n  Double: 'Double',\n  String: 'String',\n  Bytes: 'Bytes',\n} as const;\n\n/** PFrame columns and axes within them may store one of these types. */\nexport type ValueType = (typeof ValueType)[keyof typeof ValueType];\n\nexport type Metadata = Record<string, string>;\n\nexport function readMetadata<U extends Metadata, T extends keyof U = keyof U>(\n  metadata: Metadata | undefined,\n  key: T,\n): U[T] | undefined {\n  return (metadata as U | undefined)?.[key];\n}\n\ntype MetadataJsonImpl<M> = {\n  [P in keyof M as (M[P] extends StringifiedJson ? P : never)]: M[P] extends StringifiedJson<infer U> ? z.ZodType<U> : never;\n};\nexport type MetadataJson<M> = MetadataJsonImpl<Required<M>>;\n\nexport function readMetadataJsonOrThrow<M extends Metadata, T extends keyof MetadataJson<M>>(\n  metadata: Metadata | undefined,\n  metadataJson: MetadataJson<M>,\n  key: T,\n  methodNameInError: string = 'readMetadataJsonOrThrow',\n): z.infer<MetadataJson<M>[T]> | undefined {\n  const json = readMetadata<M, T>(metadata, key);\n  if (json === undefined) return undefined;\n\n  const schema = metadataJson[key];\n  try {\n    const value = JSON.parse(json);\n    return schema.parse(value);\n  } catch (error: unknown) {\n    throw new Error(\n      `${methodNameInError} failed, `\n      + `key: ${String(key)}, `\n      + `value: ${json}, `\n      + `error: ${ensureError(error)}`,\n    );\n  }\n}\n\nexport function readMetadataJson<M extends Metadata, T extends keyof MetadataJson<M>>(\n  metadata: Metadata | undefined,\n  metadataJson: MetadataJson<M>,\n  key: T,\n): z.infer<MetadataJson<M>[T]> | undefined {\n  try {\n    return readMetadataJsonOrThrow(metadata, metadataJson, key);\n  } catch {\n    return undefined; // treat invalid values as unset\n  }\n}\n\n/// Well-known domains\nexport const Domain = {\n  Alphabet: 'pl7.app/alphabet',\n  BlockId: 'pl7.app/blockId',\n} as const;\n\nexport type Domain = Metadata & Partial<{\n  [Domain.Alphabet]: 'nucleotide' | 'aminoacid' | string;\n  [Domain.BlockId]: string;\n}>;\n\nexport type DomainJson = MetadataJson<Domain>;\nexport const DomainJson: DomainJson = {};\n\n/// Helper function for reading plain domain values\nexport function readDomain<T extends keyof Domain>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): Domain[T] | undefined {\n  return readMetadata<Domain, T>(spec?.domain, key);\n}\n\n/// Helper function for reading json-encoded domain values, throws on JSON parsing error\nexport function readDomainJsonOrThrow<T extends keyof DomainJson>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<DomainJson[T]> | undefined {\n  return readMetadataJsonOrThrow<Domain, T>(spec?.domain, DomainJson, key, 'readDomainJsonOrThrow');\n}\n\n/// Helper function for reading json-encoded domain values, returns undefined on JSON parsing error\nexport function readDomainJson<T extends keyof DomainJson>(\n  spec: { domain?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<DomainJson[T]> | undefined {\n  return readMetadataJson<Domain, T>(spec?.domain, DomainJson, key);\n}\n\n/// Well-known annotations\nexport const Annotation = {\n  AxisNature: 'pl7.app/axisNature',\n  Alphabet: 'pl7.app/alphabet',\n  Description: 'pl7.app/description',\n  DiscreteValues: 'pl7.app/discreteValues',\n  Format: 'pl7.app/format',\n  Graph: {\n    Axis: {\n      HighCardinality: 'pl7.app/graph/axis/highCardinality',\n      LowerLimit: 'pl7.app/graph/axis/lowerLimit',\n      SymmetricRange: 'pl7.app/graph/axis/symmetricRange',\n      UpperLimit: 'pl7.app/graph/axis/upperLimit',\n    },\n    IsDenseAxis: 'pl7.app/graph/isDenseAxis',\n    IsVirtual: 'pl7.app/graph/isVirtual',\n    Palette: 'pl7.app/graph/palette',\n    Thresholds: 'pl7.app/graph/thresholds',\n    TreatAbsentValuesAs: 'pl7.app/graph/treatAbsentValuesAs',\n  },\n  HideDataFromUi: 'pl7.app/hideDataFromUi',\n  HideDataFromGraphs: 'pl7.app/hideDataFromGraphs',\n  IsDiscreteFilter: 'pl7.app/isDiscreteFilter',\n  IsLinkerColumn: 'pl7.app/isLinkerColumn',\n  IsSubset: 'pl7.app/isSubset',\n  Label: 'pl7.app/label',\n  Max: 'pl7.app/max',\n  Min: 'pl7.app/min',\n  MultipliesBy: 'pl7.app/multipliesBy',\n  Parents: 'pl7.app/parents',\n  Sequence: {\n    Annotation: {\n      Mapping: 'pl7.app/sequence/annotation/mapping',\n    },\n    IsAnnotation: 'pl7.app/sequence/isAnnotation',\n  },\n  Table: {\n    FontFamily: 'pl7.app/table/fontFamily',\n    OrderPriority: 'pl7.app/table/orderPriority',\n    Visibility: 'pl7.app/table/visibility',\n  },\n  Trace: 'pl7.app/trace',\n} as const;\n\nexport type Annotation = Metadata & Partial<{\n  [Annotation.Alphabet]: 'nucleotide' | 'aminoacid' | string;\n  [Annotation.AxisNature]: 'homogeneous' | 'heterogeneous' | 'scaleCompatible' | string;\n  [Annotation.Description]: string;\n  [Annotation.DiscreteValues]: StringifiedJson<number[]> | StringifiedJson<string[]>;\n  [Annotation.Format]: string;\n  [Annotation.Graph.Axis.HighCardinality]: StringifiedJson<boolean>;\n  [Annotation.Graph.Axis.LowerLimit]: StringifiedJson<number>;\n  [Annotation.Graph.Axis.SymmetricRange]: StringifiedJson<boolean>;\n  [Annotation.Graph.Axis.UpperLimit]: StringifiedJson<number>;\n  [Annotation.Graph.IsDenseAxis]: StringifiedJson<boolean>;\n  [Annotation.Graph.IsVirtual]: StringifiedJson<boolean>;\n  [Annotation.Graph.Palette]: StringifiedJson<{ mapping: Record<string, number>; name: string }>;\n  [Annotation.Graph.Thresholds]: StringifiedJson<{ columnId: { valueType: ValueType; name: string }; value: number }[]>;\n  [Annotation.Graph.TreatAbsentValuesAs]: StringifiedJson<number>;\n  [Annotation.HideDataFromUi]: StringifiedJson<boolean>;\n  [Annotation.HideDataFromGraphs]: StringifiedJson<boolean>;\n  [Annotation.IsDiscreteFilter]: StringifiedJson<boolean>;\n  [Annotation.IsLinkerColumn]: StringifiedJson<boolean>;\n  [Annotation.IsSubset]: StringifiedJson<boolean>;\n  [Annotation.Label]: string;\n  [Annotation.Max]: StringifiedJson<number>;\n  [Annotation.Min]: StringifiedJson<number>;\n  [Annotation.MultipliesBy]: StringifiedJson<AxisSpec['name'][]>;\n  [Annotation.Parents]: StringifiedJson<AxisSpec['name'][]>;\n  [Annotation.Sequence.Annotation.Mapping]: StringifiedJson<Record<string, string>>;\n  [Annotation.Sequence.IsAnnotation]: StringifiedJson<boolean>;\n  [Annotation.Table.FontFamily]: string;\n  [Annotation.Table.OrderPriority]: StringifiedJson<number>;\n  [Annotation.Table.Visibility]: 'hidden' | 'optional' | string;\n  [Annotation.Trace]: StringifiedJson<Record<string, unknown>>;\n}>;\n\n// export const AxisSpec = z.object({\n//   type: z.nativeEnum(ValueType),\n//   name: z.string(),\n//   domain: z.record(z.string(), z.string()).optional(),\n//   annotations: z.record(z.string(), z.string()).optional(),\n//   parentAxes: z.array(z.number()).optional(),\n// }).passthrough();\n//\n// type Expect<T extends true> = T;\n// type Equal<X, Y> =\n// (<T>() => T extends X ? 1 : 2) extends (<T>() => T extends Y ? 1 : 2) ? true : false;\n//\n// type _test = Expect<Equal<\n//   Readonly<z.infer<typeof AxisSpec>>,\n//   Readonly<AxisSpec & Record<string, unknown>>\n// >>;\n\nexport type AnnotationJson = MetadataJson<Annotation>;\n\nconst ValueTypeSchema = z.enum(['Int', 'Long', 'Float', 'Double', 'String'] as const);\nexport const AnnotationJson: AnnotationJson = {\n  [Annotation.DiscreteValues]: z.array(z.string()).or(z.array(z.number())),\n  [Annotation.Graph.Axis.HighCardinality]: z.boolean(),\n  [Annotation.Graph.Axis.LowerLimit]: z.number(),\n  [Annotation.Graph.Axis.UpperLimit]: z.number(),\n  [Annotation.Graph.Axis.SymmetricRange]: z.boolean(),\n  [Annotation.Graph.IsDenseAxis]: z.boolean(),\n  [Annotation.Graph.Palette]: z.object({ mapping: z.record(z.number()), name: z.string() }),\n  [Annotation.Graph.Thresholds]: z.array(\n    z.object({\n      columnId: z.object({ valueType: ValueTypeSchema, name: z.string() }),\n      value: z.number(),\n    }),\n  ),\n  [Annotation.Graph.TreatAbsentValuesAs]: z.number(),\n  [Annotation.Graph.IsVirtual]: z.boolean(),\n  [Annotation.HideDataFromUi]: z.boolean(),\n  [Annotation.HideDataFromGraphs]: z.boolean(),\n  [Annotation.IsDiscreteFilter]: z.boolean(),\n  [Annotation.IsLinkerColumn]: z.boolean(),\n  [Annotation.IsSubset]: z.boolean(),\n  [Annotation.Max]: z.number(),\n  [Annotation.Min]: z.number(),\n  [Annotation.MultipliesBy]: z.array(z.string()),\n  [Annotation.Parents]: z.array(z.string()),\n  [Annotation.Sequence.Annotation.Mapping]: z.record(z.string(), z.string()),\n  [Annotation.Sequence.IsAnnotation]: z.boolean(),\n  [Annotation.Table.OrderPriority]: z.number(),\n  [Annotation.Trace]: z.record(z.string(), z.unknown()),\n};\n\n/// Helper function for reading plain annotation values\nexport function readAnnotation<T extends keyof Annotation>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): Annotation[T] | undefined {\n  return readMetadata<Annotation, T>(spec?.annotations, key);\n}\n\n/// Helper function for reading json-encoded annotation values, throws on JSON parsing error\nexport function readAnnotationJsonOrThrow<T extends keyof AnnotationJson>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<AnnotationJson[T]> | undefined {\n  return readMetadataJsonOrThrow<Annotation, T>(spec?.annotations, AnnotationJson, key, 'readAnnotationJsonOrThrow');\n}\n\n/// Helper function for reading json-encoded annotation values, returns undefined on JSON parsing error\nexport function readAnnotationJson<T extends keyof AnnotationJson>(\n  spec: { annotations?: Metadata | undefined } | undefined,\n  key: T,\n): z.infer<AnnotationJson[T]> | undefined {\n  return readMetadataJson<Annotation, T>(spec?.annotations, AnnotationJson, key);\n}\n\n/**\n * Specification of an individual axis.\n *\n * Each axis is a part of a composite key that addresses data inside the PColumn.\n *\n * Each record inside a PColumn is addressed by a unique tuple of values set for\n * all the axes specified in the column spec.\n */\nexport type AxisSpec = {\n  /** Type of the axis value. Should not use non-key types like float or double. */\n  readonly type: ValueType;\n\n  /** Name of the axis */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** Any additional information attached to the axis that does not affect its\n   * identifier */\n  readonly annotations?: Record<string, string>;\n\n  /**\n   * Parent axes provide contextual grouping for the axis in question, establishing\n   * a hierarchy where the current axis is dependent on one or more axes for its\n   * full definition and meaning. For instance, in a data structure where each\n   * \"container\" axis may contain multiple \"item\" axes, the `item` axis would\n   * list the index of the `container` axis in this field to denote its dependency.\n   *\n   * This means that the identity or significance of the `item` axis is only\n   * interpretable when combined with its parent `container` axis. An `item` axis\n   * index by itself may be non-unique and only gains uniqueness within the context\n   * of its parent `container`. Therefore, the `parentAxes` field is essential for\n   * mapping these relationships and ensuring data coherence across nested or\n   * multi-level data models.\n   *\n   * A list of zero-based indices of parent axes in the overall axes specification\n   * from the column spec. Each index corresponds to the position of a parent axis\n   * in the list that defines the structure of the data model.\n   */\n  readonly parentAxes?: number[];\n};\n\n/** Parents are specs, not indexes; normalized axis can be used considering its parents independently from column */\nexport interface AxisSpecNormalized extends Omit<AxisSpec, 'parentAxes'> {\n  parentAxesSpec: AxisSpecNormalized[];\n}\n\n/** Tree: axis is a root, its parents are children */\nexport type AxisTree = {\n  axis: AxisSpecNormalized;\n  children: AxisTree[]; // parents\n};\n\nfunction makeAxisTree(axis: AxisSpecNormalized): AxisTree {\n  return { axis, children: [] };\n}\n\n/** Build tree by axis parents annotations */\nexport function getAxesTree(rootAxis: AxisSpecNormalized): AxisTree {\n  const root = makeAxisTree(rootAxis);\n  let nodesQ = [root];\n  while (nodesQ.length) {\n    const nextNodes: AxisTree[] = [];\n    for (const node of nodesQ) {\n      node.children = node.axis.parentAxesSpec.map(makeAxisTree);\n      nextNodes.push(...node.children);\n    }\n    nodesQ = nextNodes;\n  }\n  return root;\n}\n\n/** Get set of canonicalized axisIds from axisTree */\nexport function getSetFromAxisTree(tree: AxisTree): Set<CanonicalizedJson<AxisId>> {\n  const set = new Set([canonicalizeJson(getAxisId(tree.axis))]);\n  let nodesQ = [tree];\n  while (nodesQ.length) {\n    const nextNodes = [];\n    for (const node of nodesQ) {\n      for (const parent of node.children) {\n        set.add(canonicalizeJson(getAxisId(parent.axis)));\n        nextNodes.push(parent);\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return set;\n}\n\n/** Get array of axisSpecs from axisTree */\nexport function getArrayFromAxisTree(tree: AxisTree): AxisSpecNormalized[] {\n  const res = [tree.axis];\n  let nodesQ = [tree];\n  while (nodesQ.length) {\n    const nextNodes = [];\n    for (const node of nodesQ) {\n      for (const parent of node.children) {\n        res.push(parent.axis);\n        nextNodes.push(parent);\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return res;\n}\n\nexport function canonicalizeAxisWithParents(axis: AxisSpecNormalized) {\n  return canonicalizeJson(getArrayFromAxisTree(getAxesTree(axis)).map(getAxisId));\n}\n\nfunction normalizingAxesComparator(axis1: AxisSpecNormalized, axis2: AxisSpecNormalized): 1 | -1 | 0 {\n  if (axis1.name !== axis2.name) {\n    return axis1.name < axis2.name ? 1 : -1;\n  }\n  if (axis1.type !== axis2.type) {\n    return axis1.type < axis2.type ? 1 : -1;\n  }\n  const domain1 = canonicalizeJson(axis1.domain ?? {});\n  const domain2 = canonicalizeJson(axis2.domain ?? {});\n  if (domain1 !== domain2) {\n    return domain1 < domain2 ? 1 : -1;\n  }\n\n  const parents1 = canonicalizeAxisWithParents(axis1);\n  const parents2 = canonicalizeAxisWithParents(axis2);\n\n  if (parents1 !== parents2) {\n    return parents1 < parents2 ? 1 : -1;\n  }\n\n  const annotation1 = canonicalizeJson(axis1.annotations ?? {});\n  const annotation2 = canonicalizeJson(axis2.annotations ?? {});\n  if (annotation1 !== annotation2) {\n    return annotation1 < annotation2 ? 1 : -1;\n  }\n  return 0;\n}\n\nfunction parseParentsFromAnnotations(axis: AxisSpec) {\n  const parentsList = readAnnotationJson(axis, Annotation.Parents);\n  if (parentsList === undefined) {\n    return [];\n  }\n  return parentsList;\n}\n\nfunction sortParentsDeep(axisSpec: AxisSpecNormalized) {\n  axisSpec.parentAxesSpec.forEach(sortParentsDeep);\n  axisSpec.parentAxesSpec.sort(normalizingAxesComparator);\n}\n\nfunction hasCycleOfParents(axisSpec: AxisSpecNormalized) {\n  const root = makeAxisTree(axisSpec);\n  let nodesQ = [root];\n  const ancestors = new Set(canonicalizeJson(getAxisId(axisSpec)));\n  while (nodesQ.length) {\n    const nextNodes: AxisTree[] = [];\n    const levelIds = new Set<CanonicalizedJson<AxisId>>();\n    for (const node of nodesQ) {\n      node.children = node.axis.parentAxesSpec.map(makeAxisTree);\n      for (const child of node.children) {\n        const childId = canonicalizeJson(getAxisId(child.axis));\n        if (!levelIds.has(childId)) {\n          nextNodes.push(child);\n          levelIds.add(childId);\n          if (ancestors.has(childId)) {\n            return true;\n          }\n          ancestors.add(childId);\n        }\n      }\n    }\n    nodesQ = nextNodes;\n  }\n  return false;\n}\n\n/** Create list of normalized axisSpec (parents are in array of specs, not indexes) */\nexport function getNormalizedAxesList(axes: AxisSpec[]): AxisSpecNormalized[] {\n  if (!axes.length) {\n    return [];\n  }\n  const modifiedAxes: AxisSpecNormalized[] = axes.map((axis) => {\n    const { parentAxes: _, ...copiedRest } = axis;\n    return { ...copiedRest, annotations: { ...copiedRest.annotations }, parentAxesSpec: [] };\n  });\n\n  axes.forEach((axis, idx) => {\n    const modifiedAxis = modifiedAxes[idx];\n    if (axis.parentAxes) { // if we have parents by indexes then take from the list\n      modifiedAxis.parentAxesSpec = axis.parentAxes.map((idx) => modifiedAxes[idx]);\n    } else { // else try to parse from annotation name\n      const parents = parseParentsFromAnnotations(axis).map((name) => modifiedAxes.find((axis) => axis.name === name));\n      modifiedAxis.parentAxesSpec = parents.some((p) => p === undefined) ? [] : parents as AxisSpecNormalized[];\n\n      delete modifiedAxis.annotations?.[Annotation.Parents];\n    }\n  });\n\n  if (modifiedAxes.some(hasCycleOfParents)) { // Axes list is broken\n    modifiedAxes.forEach((axis) => {\n      axis.parentAxesSpec = [];\n    });\n  } else {\n    modifiedAxes.forEach((axis) => {\n      sortParentsDeep(axis);\n    });\n  }\n\n  return modifiedAxes;\n}\n\n/** Create list of regular axisSpec from normalized (parents are indexes, inside of current axes list) */\nexport function getDenormalizedAxesList(axesSpec: AxisSpecNormalized[]): AxisSpec[] {\n  const idsList = axesSpec.map((axisSpec) => canonicalizeJson(getAxisId(axisSpec)));\n  return axesSpec.map((axisSpec) => {\n    const parentsIds = axisSpec.parentAxesSpec.map((axisSpec) => canonicalizeJson(getAxisId(axisSpec)));\n    const parentIdxs = parentsIds.map((id) => idsList.indexOf(id));\n    const { parentAxesSpec: _, ...copiedRest } = axisSpec;\n    if (parentIdxs.length) {\n      return { ...copiedRest, parentAxes: parentIdxs } as AxisSpec;\n    }\n    return copiedRest;\n  });\n}\n\n/** Common type representing spec for all the axes in a column */\nexport type AxesSpec = AxisSpec[];\n\n/// Well-known column names\nexport const PColumnName = {\n  Label: 'pl7.app/label',\n  Table: {\n    RowSelection: 'pl7.app/table/row-selection',\n  },\n} as const;\n\n/**\n * Full column specification including all axes specs and specs of the column\n * itself.\n *\n * A PColumn in its essence represents a mapping from a fixed size, explicitly\n * typed tuple to an explicitly typed value.\n *\n * (axis1Value1, axis2Value1, ...) -> columnValue\n *\n * Each element in tuple correspond to the axis having the same index in axesSpec.\n */\nexport type PUniversalColumnSpec = PObjectSpec & {\n  /** Defines specific type of BObject, the most generic type of unit of\n   * information in Platforma Project. */\n  readonly kind: 'PColumn';\n\n  /** Type of column values */\n  readonly valueType: string;\n\n  /** Column name */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** Any additional information attached to the column that does not affect its\n   * identifier */\n  readonly annotations?: Record<string, string>;\n\n  /** A list of zero-based indices of parent axes from the {@link axesSpec} array. */\n  readonly parentAxes?: number[];\n\n  /** Axes specifications */\n  readonly axesSpec: AxesSpec;\n};\n\n/**\n * Specification of a data column.\n *\n * Data column is a specialized type of PColumn that stores only simple values (strings and numbers)\n * addressed by multiple keys. This is in contrast to other PColumn variants that can store more complex\n * values like files or other abstract data types. Data columns are optimized for storing and processing\n * basic tabular data.\n */\nexport type PDataColumnSpec = PUniversalColumnSpec & {\n  /** Type of column values */\n  readonly valueType: ValueType;\n};\n\n// @todo: change this to PUniversalColumnSpec\nexport type PColumnSpec = PDataColumnSpec;\n\n/** Unique PColumnSpec identifier */\nexport type PColumnSpecId = {\n  /** Defines specific type of BObject, the most generic type of unit of\n   * information in Platforma Project. */\n  readonly kind: 'PColumn';\n\n  /** Type of column values */\n  readonly valueType: ValueType;\n\n  /** Column name */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis name, type and parents to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n\n  /** A list of zero-based indices of parent axes from the {@link axesSpec} array. */\n  readonly parentAxes?: number[];\n\n  /** Axes id */\n  readonly axesId: AxesId;\n};\n\nexport function getPColumnSpecId(spec: PColumnSpec): PColumnSpecId {\n  return {\n    kind: spec.kind,\n    valueType: spec.valueType,\n    name: spec.name,\n    domain: spec.domain,\n    parentAxes: spec.parentAxes,\n    axesId: getAxesId(spec.axesSpec),\n  };\n}\n\nexport interface PColumn<Data> extends PObject<Data> {\n  /** PColumn spec, allowing it to be found among other PObjects */\n  readonly spec: PColumnSpec;\n}\n\n/** Columns in a PFrame also have internal identifier, this object represents\n * combination of specs and such id */\nexport interface PColumnIdAndSpec {\n  /** Internal column id within the PFrame */\n  readonly columnId: PObjectId;\n\n  /** Column spec */\n  readonly spec: PColumnSpec;\n}\n\n/** Get column id and spec from a column */\nexport function getColumnIdAndSpec<Data>(column: PColumn<Data>): PColumnIdAndSpec {\n  return {\n    columnId: column.id,\n    spec: column.spec,\n  };\n}\n\n/** Information returned by {@link PFrame.listColumns} method */\nexport interface PColumnInfo extends PColumnIdAndSpec {\n  /** True if data was associated with this PColumn */\n  readonly hasData: boolean;\n}\n\nexport interface AxisId {\n  /** Type of the axis or column value. For an axis should not use non-key\n   * types like float or double. */\n  readonly type: ValueType;\n\n  /** Name of the axis or column */\n  readonly name: string;\n\n  /** Adds auxiliary information to the axis or column name and type to form a\n   * unique identifier */\n  readonly domain?: Record<string, string>;\n}\n\n/** Array of axis ids */\nexport type AxesId = AxisId[];\n\n/** Extracts axis ids from axis spec */\nexport function getAxisId(spec: AxisSpec): AxisId {\n  const { type, name, domain } = spec;\n  const result = { type, name };\n  if (domain && Object.entries(domain).length > 0) {\n    Object.assign(result, { domain });\n  }\n  return result;\n}\n\n/** Extracts axes ids from axes spec array from column spec */\nexport function getAxesId(spec: AxesSpec): AxesId {\n  return spec.map(getAxisId);\n}\n\n/** Canonicalizes axis id */\nexport function canonicalizeAxisId(id: AxisId): CanonicalizedJson<AxisId> {\n  return canonicalizeJson(getAxisId(id));\n}\n\n/** Returns true if all domains from query are found in target */\nfunction matchDomain(query?: Record<string, string>, target?: Record<string, string>) {\n  if (query === undefined) return target === undefined;\n  if (target === undefined) return true;\n  for (const k in target) {\n    if (query[k] !== target[k]) return false;\n  }\n  return true;\n}\n\n/** Returns whether \"match\" axis id is compatible with the \"query\" */\nexport function matchAxisId(query: AxisId, target: AxisId): boolean {\n  return query.name === target.name && matchDomain(query.domain, 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package/dist/index.cjs

@@ -130,6 +130,7 @@ exports.RuntimeCapabilities = flag_utils.RuntimeCapabilities;
 exports.checkBlockFlag = flag_utils.checkBlockFlag;
 exports.extractAllRequirements = flag_utils.extractAllRequirements;
 exports.extractAllSupports = flag_utils.extractAllSupports;
+exports.bigintReplacer = json.bigintReplacer;
 exports.canonicalizeJson = json.canonicalizeJson;
 exports.parseJson = json.parseJson;
 exports.stringifyJson = json.stringifyJson;

package/dist/index.cjs.map

@@ -1 +1 @@
-{"version":3,"file":"index.cjs","sources":[],"sourcesContent":[],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;"}
+{"version":3,"file":"index.cjs","sources":[],"sourcesContent":[],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;"}

package/dist/index.js

@@ -20,7 +20,7 @@ export { ChunkedStreamReader } from './drivers/ChunkedStreamReader.js';
 export { AbortError, PFrameDriverError, PFrameError, UiError, deserializeError, deserializeResult, ensureError, hasAbortError, isAbortError, isAggregateError, isPFrameDriverError, isPFrameError, serializeError, serializeResult, unwrapResult, wrapAndSerialize, wrapAndSerializeAsync, wrapAsyncCallback, wrapCallback } from './errors.js';
 export { AllRequiresFeatureFlags, AllSupportsFeatureFlags } from './flags/block_flags.js';
 export { IncompatibleFlagsError, RuntimeCapabilities, checkBlockFlag, extractAllRequirements, extractAllSupports } from './flags/flag_utils.js';
-export { canonicalizeJson, parseJson, stringifyJson } from './json.js';
+export { bigintReplacer, canonicalizeJson, parseJson, stringifyJson } from './json.js';
 export { DefaultNavigationState } from './navigation.js';
 export { PlId, PlIdBytes, PlIdLength, digestPlId, plId, uniquePlId } from './plid.js';
 export { ensurePColumn, extractAllColumns, isPColumn, isPColumnResult, isPColumnSpec, isPColumnSpecResult, mapPObjectData } from './pool/spec.js';

package/dist/json.cjs

@@ -11,7 +11,11 @@ function canonicalizeJson(value) {
 function parseJson(value) {
     return JSON.parse(value);
 }
+function bigintReplacer(_key, value) {
+    return typeof value === 'bigint' ? value.toString() : value;
+}
 
+exports.bigintReplacer = bigintReplacer;
 exports.canonicalizeJson = canonicalizeJson;
 exports.parseJson = parseJson;
 exports.stringifyJson = stringifyJson;

package/dist/json.cjs.map

@@ -1 +1 @@
-{"version":3,"file":"json.cjs","sources":["../src/json.ts"],"sourcesContent":["import canonicalize from 'canonicalize';\n\ntype JsonPrimitive = string | number | boolean | null | undefined;\n\ntype JsonValue = JsonPrimitive | JsonValue[] | {\n  [key: string]: JsonValue;\n};\n\n// eslint-disable-next-line @typescript-eslint/no-unsafe-function-type\ntype NotAssignableToJson = bigint | symbol | Function;\n\nexport type JsonCompatible<T> = unknown extends T ? unknown : {\n  [P in keyof T]:\n  T[P] extends JsonValue ? T[P] :\n    T[P] extends NotAssignableToJson ? never :\n      JsonCompatible<T[P]>;\n};\n\nexport type StringifiedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {\n  __json_stringified: T;\n};\n\nexport function stringifyJson<T>(value: JsonCompatible<T>): StringifiedJson<T> {\n  return JSON.stringify(value)! as StringifiedJson<T>;\n}\n\nexport type CanonicalizedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {\n  __json_canonicalized: T;\n};\n\nexport function canonicalizeJson<T>(value: JsonCompatible<T>): CanonicalizedJson<T> {\n  return canonicalize(value)! as CanonicalizedJson<T>;\n}\n\nexport function parseJson<T>(value: StringifiedJson<T> | CanonicalizedJson<T>): T {\n  return JSON.parse(value) as T;\n}\n"],"names":[],"mappings":";;;;AAsBM,SAAU,aAAa,CAAI,KAAwB,EAAA;AACvD,IAAA,OAAO,IAAI,CAAC,SAAS,CAAC,KAAK,CAAwB;AACrD;AAMM,SAAU,gBAAgB,CAAI,KAAwB,EAAA;AAC1D,IAAA,OAAO,YAAY,CAAC,KAAK,CAA0B;AACrD;AAEM,SAAU,SAAS,CAAI,KAAgD,EAAA;AAC3E,IAAA,OAAO,IAAI,CAAC,KAAK,CAAC,KAAK,CAAM;AAC/B;;;;;;"}
+{"version":3,"file":"json.cjs","sources":["../src/json.ts"],"sourcesContent":["import canonicalize from 'canonicalize';\n\ntype JsonPrimitive = string | number | boolean | null;\n\ntype JsonValue = JsonPrimitive | JsonValue[] | { [key: string]: JsonValue };\n\nexport type JsonSerializable =\n  | JsonPrimitive\n  | JsonSerializable[]\n  | { [key: string]: JsonSerializable }\n  | { toJSON(): JsonValue };\n\n// eslint-disable-next-line @typescript-eslint/no-unsafe-function-type\ntype NotAssignableToJson = bigint | symbol | Function;\n\nexport type JsonCompatible<T> = unknown extends T ? unknown\n  : [T] extends [JsonValue] ? T\n      : [T] extends [NotAssignableToJson] ? never\n          : {\n              [P in keyof T]: [Exclude<T[P], undefined>] extends [JsonValue] ? T[P]\n                : [Exclude<T[P], undefined>] extends [NotAssignableToJson] ? never\n                    : JsonCompatible<T[P]>;\n            };\n\nexport type StringifiedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {\n  __json_stringified: T;\n};\n\nexport function stringifyJson<T>(value: JsonCompatible<T>): StringifiedJson<T>;\nexport function stringifyJson<T extends JsonSerializable>(value: T): string;\nexport function stringifyJson(value: unknown): string {\n  return JSON.stringify(value);\n}\n\nexport type CanonicalizedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {\n  __json_canonicalized: T;\n};\n\nexport function canonicalizeJson<T>(value: JsonCompatible<T>): CanonicalizedJson<T>;\nexport function canonicalizeJson<T extends JsonSerializable>(value: T): string;\nexport function canonicalizeJson(value: unknown): string {\n  return canonicalize(value)!;\n}\n\nexport function parseJson<T>(value: StringifiedJson<T> | CanonicalizedJson<T>): T {\n  return JSON.parse(value) as T;\n}\n\nexport function bigintReplacer(_key: string, value: unknown): unknown {\n  return typeof value === 'bigint' ? value.toString() : value;\n}\n"],"names":[],"mappings":";;;;AA8BM,SAAU,aAAa,CAAC,KAAc,EAAA;AAC1C,IAAA,OAAO,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC;AAC9B;AAQM,SAAU,gBAAgB,CAAC,KAAc,EAAA;AAC7C,IAAA,OAAO,YAAY,CAAC,KAAK,CAAE;AAC7B;AAEM,SAAU,SAAS,CAAI,KAAgD,EAAA;AAC3E,IAAA,OAAO,IAAI,CAAC,KAAK,CAAC,KAAK,CAAM;AAC/B;AAEM,SAAU,cAAc,CAAC,IAAY,EAAE,KAAc,EAAA;AACzD,IAAA,OAAO,OAAO,KAAK,KAAK,QAAQ,GAAG,KAAK,CAAC,QAAQ,EAAE,GAAG,KAAK;AAC7D;;;;;;;"}

package/dist/json.d.ts

@@ -1,19 +1,27 @@
-type JsonPrimitive = string | number | boolean | null | undefined;
+type JsonPrimitive = string | number | boolean | null;
 type JsonValue = JsonPrimitive | JsonValue[] | {
     [key: string]: JsonValue;
 };
+export type JsonSerializable = JsonPrimitive | JsonSerializable[] | {
+    [key: string]: JsonSerializable;
+} | {
+    toJSON(): JsonValue;
+};
 type NotAssignableToJson = bigint | symbol | Function;
-export type JsonCompatible<T> = unknown extends T ? unknown : {
-    [P in keyof T]: T[P] extends JsonValue ? T[P] : T[P] extends NotAssignableToJson ? never : JsonCompatible<T[P]>;
+export type JsonCompatible<T> = unknown extends T ? unknown : [T] extends [JsonValue] ? T : [T] extends [NotAssignableToJson] ? never : {
+    [P in keyof T]: [Exclude<T[P], undefined>] extends [JsonValue] ? T[P] : [Exclude<T[P], undefined>] extends [NotAssignableToJson] ? never : JsonCompatible<T[P]>;
 };
 export type StringifiedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {
     __json_stringified: T;
 };
 export declare function stringifyJson<T>(value: JsonCompatible<T>): StringifiedJson<T>;
+export declare function stringifyJson<T extends JsonSerializable>(value: T): string;
 export type CanonicalizedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {
     __json_canonicalized: T;
 };
 export declare function canonicalizeJson<T>(value: JsonCompatible<T>): CanonicalizedJson<T>;
+export declare function canonicalizeJson<T extends JsonSerializable>(value: T): string;
 export declare function parseJson<T>(value: StringifiedJson<T> | CanonicalizedJson<T>): T;
+export declare function bigintReplacer(_key: string, value: unknown): unknown;
 export {};
 //# sourceMappingURL=json.d.ts.map

package/dist/json.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"json.d.ts","sourceRoot":"","sources":["../src/json.ts"],"names":[],"mappings":"AAEA,KAAK,aAAa,GAAG,MAAM,GAAG,MAAM,GAAG,OAAO,GAAG,IAAI,GAAG,SAAS,CAAC;AAElE,KAAK,SAAS,GAAG,aAAa,GAAG,SAAS,EAAE,GAAG;IAC7C,CAAC,GAAG,EAAE,MAAM,GAAG,SAAS,CAAC;CAC1B,CAAC;AAGF,KAAK,mBAAmB,GAAG,MAAM,GAAG,MAAM,GAAG,QAAQ,CAAC;AAEtD,MAAM,MAAM,cAAc,CAAC,CAAC,IAAI,OAAO,SAAS,CAAC,GAAG,OAAO,GAAG;KAC3D,CAAC,IAAI,MAAM,CAAC,GACb,CAAC,CAAC,CAAC,CAAC,SAAS,SAAS,GAAG,CAAC,CAAC,CAAC,CAAC,GAC3B,CAAC,CAAC,CAAC,CAAC,SAAS,mBAAmB,GAAG,KAAK,GACtC,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;CACzB,CAAC;AAEF,MAAM,MAAM,eAAe,CAAC,CAAC,GAAG,OAAO,IAAI,cAAc,CAAC,CAAC,CAAC,SAAS,KAAK,GAAG,KAAK,GAAG,MAAM,GAAG;IAC5F,kBAAkB,EAAE,CAAC,CAAC;CACvB,CAAC;AAEF,wBAAgB,aAAa,CAAC,CAAC,EAAE,KAAK,EAAE,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,CAAC,CAAC,CAAC,CAE7E;AAED,MAAM,MAAM,iBAAiB,CAAC,CAAC,GAAG,OAAO,IAAI,cAAc,CAAC,CAAC,CAAC,SAAS,KAAK,GAAG,KAAK,GAAG,MAAM,GAAG;IAC9F,oBAAoB,EAAE,CAAC,CAAC;CACzB,CAAC;AAEF,wBAAgB,gBAAgB,CAAC,CAAC,EAAE,KAAK,EAAE,cAAc,CAAC,CAAC,CAAC,GAAG,iBAAiB,CAAC,CAAC,CAAC,CAElF;AAED,wBAAgB,SAAS,CAAC,CAAC,EAAE,KAAK,EAAE,eAAe,CAAC,CAAC,CAAC,GAAG,iBAAiB,CAAC,CAAC,CAAC,GAAG,CAAC,CAEhF"}
+{"version":3,"file":"json.d.ts","sourceRoot":"","sources":["../src/json.ts"],"names":[],"mappings":"AAEA,KAAK,aAAa,GAAG,MAAM,GAAG,MAAM,GAAG,OAAO,GAAG,IAAI,CAAC;AAEtD,KAAK,SAAS,GAAG,aAAa,GAAG,SAAS,EAAE,GAAG;IAAE,CAAC,GAAG,EAAE,MAAM,GAAG,SAAS,CAAA;CAAE,CAAC;AAE5E,MAAM,MAAM,gBAAgB,GACxB,aAAa,GACb,gBAAgB,EAAE,GAClB;IAAE,CAAC,GAAG,EAAE,MAAM,GAAG,gBAAgB,CAAA;CAAE,GACnC;IAAE,MAAM,IAAI,SAAS,CAAA;CAAE,CAAC;AAG5B,KAAK,mBAAmB,GAAG,MAAM,GAAG,MAAM,GAAG,QAAQ,CAAC;AAEtD,MAAM,MAAM,cAAc,CAAC,CAAC,IAAI,OAAO,SAAS,CAAC,GAAG,OAAO,GACvD,CAAC,CAAC,CAAC,SAAS,CAAC,SAAS,CAAC,GAAG,CAAC,GACvB,CAAC,CAAC,CAAC,SAAS,CAAC,mBAAmB,CAAC,GAAG,KAAK,GACrC;KACG,CAAC,IAAI,MAAM,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,SAAS,CAAC,CAAC,SAAS,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GACjE,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,SAAS,CAAC,CAAC,SAAS,CAAC,mBAAmB,CAAC,GAAG,KAAK,GAC5D,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;CAC7B,CAAC;AAEd,MAAM,MAAM,eAAe,CAAC,CAAC,GAAG,OAAO,IAAI,cAAc,CAAC,CAAC,CAAC,SAAS,KAAK,GAAG,KAAK,GAAG,MAAM,GAAG;IAC5F,kBAAkB,EAAE,CAAC,CAAC;CACvB,CAAC;AAEF,wBAAgB,aAAa,CAAC,CAAC,EAAE,KAAK,EAAE,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,CAAC,CAAC,CAAC,CAAC;AAC/E,wBAAgB,aAAa,CAAC,CAAC,SAAS,gBAAgB,EAAE,KAAK,EAAE,CAAC,GAAG,MAAM,CAAC;AAK5E,MAAM,MAAM,iBAAiB,CAAC,CAAC,GAAG,OAAO,IAAI,cAAc,CAAC,CAAC,CAAC,SAAS,KAAK,GAAG,KAAK,GAAG,MAAM,GAAG;IAC9F,oBAAoB,EAAE,CAAC,CAAC;CACzB,CAAC;AAEF,wBAAgB,gBAAgB,CAAC,CAAC,EAAE,KAAK,EAAE,cAAc,CAAC,CAAC,CAAC,GAAG,iBAAiB,CAAC,CAAC,CAAC,CAAC;AACpF,wBAAgB,gBAAgB,CAAC,CAAC,SAAS,gBAAgB,EAAE,KAAK,EAAE,CAAC,GAAG,MAAM,CAAC;AAK/E,wBAAgB,SAAS,CAAC,CAAC,EAAE,KAAK,EAAE,eAAe,CAAC,CAAC,CAAC,GAAG,iBAAiB,CAAC,CAAC,CAAC,GAAG,CAAC,CAEhF;AAED,wBAAgB,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,OAAO,GAAG,OAAO,CAEpE"}

package/dist/json.js

@@ -9,6 +9,9 @@ function canonicalizeJson(value) {
 function parseJson(value) {
     return JSON.parse(value);
 }
+function bigintReplacer(_key, value) {
+    return typeof value === 'bigint' ? value.toString() : value;
+}
 
-export { canonicalizeJson, parseJson, stringifyJson };
+export { bigintReplacer, canonicalizeJson, parseJson, stringifyJson };
 //# sourceMappingURL=json.js.map

package/dist/json.js.map

@@ -1 +1 @@
-{"version":3,"file":"json.js","sources":["../src/json.ts"],"sourcesContent":["import canonicalize from 'canonicalize';\n\ntype JsonPrimitive = string | number | boolean | null | undefined;\n\ntype JsonValue = JsonPrimitive | JsonValue[] | {\n  [key: string]: JsonValue;\n};\n\n// eslint-disable-next-line @typescript-eslint/no-unsafe-function-type\ntype NotAssignableToJson = bigint | symbol | Function;\n\nexport type JsonCompatible<T> = unknown extends T ? unknown : {\n  [P in keyof T]:\n  T[P] extends JsonValue ? T[P] :\n    T[P] extends NotAssignableToJson ? never :\n      JsonCompatible<T[P]>;\n};\n\nexport type StringifiedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {\n  __json_stringified: T;\n};\n\nexport function stringifyJson<T>(value: JsonCompatible<T>): StringifiedJson<T> {\n  return JSON.stringify(value)! as StringifiedJson<T>;\n}\n\nexport type CanonicalizedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {\n  __json_canonicalized: T;\n};\n\nexport function canonicalizeJson<T>(value: JsonCompatible<T>): CanonicalizedJson<T> {\n  return canonicalize(value)! as CanonicalizedJson<T>;\n}\n\nexport function parseJson<T>(value: StringifiedJson<T> | CanonicalizedJson<T>): T {\n  return JSON.parse(value) as T;\n}\n"],"names":[],"mappings":";;AAsBM,SAAU,aAAa,CAAI,KAAwB,EAAA;AACvD,IAAA,OAAO,IAAI,CAAC,SAAS,CAAC,KAAK,CAAwB;AACrD;AAMM,SAAU,gBAAgB,CAAI,KAAwB,EAAA;AAC1D,IAAA,OAAO,YAAY,CAAC,KAAK,CAA0B;AACrD;AAEM,SAAU,SAAS,CAAI,KAAgD,EAAA;AAC3E,IAAA,OAAO,IAAI,CAAC,KAAK,CAAC,KAAK,CAAM;AAC/B;;;;"}
+{"version":3,"file":"json.js","sources":["../src/json.ts"],"sourcesContent":["import canonicalize from 'canonicalize';\n\ntype JsonPrimitive = string | number | boolean | null;\n\ntype JsonValue = JsonPrimitive | JsonValue[] | { [key: string]: JsonValue };\n\nexport type JsonSerializable =\n  | JsonPrimitive\n  | JsonSerializable[]\n  | { [key: string]: JsonSerializable }\n  | { toJSON(): JsonValue };\n\n// eslint-disable-next-line @typescript-eslint/no-unsafe-function-type\ntype NotAssignableToJson = bigint | symbol | Function;\n\nexport type JsonCompatible<T> = unknown extends T ? unknown\n  : [T] extends [JsonValue] ? T\n      : [T] extends [NotAssignableToJson] ? never\n          : {\n              [P in keyof T]: [Exclude<T[P], undefined>] extends [JsonValue] ? T[P]\n                : [Exclude<T[P], undefined>] extends [NotAssignableToJson] ? never\n                    : JsonCompatible<T[P]>;\n            };\n\nexport type StringifiedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {\n  __json_stringified: T;\n};\n\nexport function stringifyJson<T>(value: JsonCompatible<T>): StringifiedJson<T>;\nexport function stringifyJson<T extends JsonSerializable>(value: T): string;\nexport function stringifyJson(value: unknown): string {\n  return JSON.stringify(value);\n}\n\nexport type CanonicalizedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {\n  __json_canonicalized: T;\n};\n\nexport function canonicalizeJson<T>(value: JsonCompatible<T>): CanonicalizedJson<T>;\nexport function canonicalizeJson<T extends JsonSerializable>(value: T): string;\nexport function canonicalizeJson(value: unknown): string {\n  return canonicalize(value)!;\n}\n\nexport function parseJson<T>(value: StringifiedJson<T> | CanonicalizedJson<T>): T {\n  return JSON.parse(value) as T;\n}\n\nexport function bigintReplacer(_key: string, value: unknown): unknown {\n  return typeof value === 'bigint' ? value.toString() : value;\n}\n"],"names":[],"mappings":";;AA8BM,SAAU,aAAa,CAAC,KAAc,EAAA;AAC1C,IAAA,OAAO,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC;AAC9B;AAQM,SAAU,gBAAgB,CAAC,KAAc,EAAA;AAC7C,IAAA,OAAO,YAAY,CAAC,KAAK,CAAE;AAC7B;AAEM,SAAU,SAAS,CAAI,KAAgD,EAAA;AAC3E,IAAA,OAAO,IAAI,CAAC,KAAK,CAAC,KAAK,CAAM;AAC/B;AAEM,SAAU,cAAc,CAAC,IAAY,EAAE,KAAc,EAAA;AACzD,IAAA,OAAO,OAAO,KAAK,KAAK,QAAQ,GAAG,KAAK,CAAC,QAAQ,EAAE,GAAG,KAAK;AAC7D;;;;"}

package/dist/pool/spec.cjs.map

@@ -1 +1 @@
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undefined\n    : {\n        ...pObj,\n        data: cb(pObj.data),\n      };\n}\n\nexport function extractAllColumns<D>(entry: JoinEntry<PColumn<D>>): PColumn<D>[] {\n  const columns = new Map<PObjectId, PColumn<D>>();\n  const addAllColumns = (entry: JoinEntry<PColumn<D>>) => {\n    switch (entry.type) {\n      case 'column':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'slicedColumn':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'artificialColumn':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'inlineColumn':\n        return;\n      case 'full':\n      case 'inner':\n        for (const e of entry.entries) addAllColumns(e);\n        return;\n      case 'outer':\n        addAllColumns(entry.primary);\n        for (const e of entry.secondary) addAllColumns(e);\n        return;\n      default:\n        assertNever(entry);\n    }\n  };\n  addAllColumns(entry);\n  return [...columns.values()];\n}\n"],"names":["assertNever"],"mappings":";;;;AAuCM,SAAU,aAAa,CAAC,IAAiB,EAAA;AAC7C,IAAA,OAAO,IAAI,CAAC,IAAI,KAAK,SAAS;AAChC;AAEM,SAAU,SAAS,CAAI,GAAe,EAAA;AAC1C,IAAA,OAAO,aAAa,CAAC,GAAG,CAAC,IAAI,CAAC;AAChC;AAEM,SAAU,mBAAmB,CACjC,CAA+B,EAAA;AAE/B,IAAA,OAAO,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC;AAC7B;AAEM,SAAU,eAAe,CAC7B,CAA8B,EAAA;IAE9B,OAAO,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC;AAClC;AAEM,SAAU,aAAa,CAAI,GAAe,EAAA;AAC9C,IAAA,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC;QAAE,MAAM,IAAI,KAAK,CAAC,CAAA,sBAAA,EAAyB,GAAG,CAAC,IAAI,CAAC,IAAI,CAAA,CAAA,CAAG,CAAC;AAC/E,IAAA,OAAO,GAAG;AACZ;AAYM,SAAU,cAAc,CAC5B,IAA6B,EAC7B,EAAiB,EAAA;IAEjB,OAAO,IAAI,KAAK;AACd,UAAE;AACF,UAAE;AACE,YAAA,GAAG,IAAI;AACP,YAAA,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC;SACpB;AACP;AAEM,SAAU,iBAAiB,CAAI,KAA4B,EAAA;AAC/D,IAAA,MAAM,OAAO,GAAG,IAAI,GAAG,EAAyB;AAChD,IAAA,MAAM,aAAa,GAAG,CAAC,KAA4B,KAAI;AACrD,QAAA,QAAQ,KAAK,CAAC,IAAI;AAChB,YAAA,KAAK,QAAQ;AACX,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,cAAc;AACjB,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,kBAAkB;AACrB,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,cAAc;gBACjB;AACF,YAAA,KAAK,MAAM;AACX,YAAA,KAAK,OAAO;AACV,gBAAA,KAAK,MAAM,CAAC,IAAI,KAAK,CAAC,OAAO;oBAAE,aAAa,CAAC,CAAC,CAAC;gBAC/C;AACF,YAAA,KAAK,OAAO;AACV,gBAAA,aAAa,CAAC,KAAK,CAAC,OAAO,CAAC;AAC5B,gBAAA,KAAK,MAAM,CAAC,IAAI,KAAK,CAAC,SAAS;oBAAE,aAAa,CAAC,CAAC,CAAC;gBACjD;AACF,YAAA;gBACEA,gBAAW,CAAC,KAAK,CAAC;;AAExB,IAAA,CAAC;IACD,aAAa,CAAC,KAAK,CAAC;AACpB,IAAA,OAAO,CAAC,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC;AAC9B;;;;;;;;;;"}
+{"version":3,"file":"spec.cjs","sources":["../../src/pool/spec.ts"],"sourcesContent":["import type { Branded } from '../branding';\nimport type { JoinEntry, PColumn, PColumnSpec } from '../drivers';\nimport { assertNever } from '../util';\nimport type { ResultPoolEntry } from './entry';\n\n/** Any object exported into the result pool by the block always have spec attached to it */\nexport type PObjectSpec = {\n  /** PObject kind discriminator */\n  readonly kind: string;\n\n  /** Name is common part of PObject identity */\n  readonly name: string;\n\n  /** Domain is a set of key-value pairs that can be used to identify the object */\n  readonly domain?: Record<string, string>;\n\n  /** Additional information attached to the object */\n  readonly annotations?: Record<string, string>;\n};\n\n/** Stable PObject id */\nexport type PObjectId = Branded<string, 'PColumnId'>;\n\n/**\n * Full PObject representation.\n *\n * @template Data type of the object referencing or describing the \"data\" part of the PObject\n * */\nexport interface PObject<Data> {\n  /** Fully rendered PObjects are assigned a stable identifier. */\n  readonly id: PObjectId;\n\n  /** PObject spec, allowing it to be found among other PObjects */\n  readonly spec: PObjectSpec;\n\n  /** A handle to data object */\n  readonly data: Data;\n}\n\nexport function isPColumnSpec(spec: PObjectSpec): spec is PColumnSpec {\n  return spec.kind === 'PColumn';\n}\n\nexport function isPColumn<T>(obj: PObject<T>): obj is PColumn<T> {\n  return isPColumnSpec(obj.spec);\n}\n\nexport function isPColumnSpecResult(\n  r: ResultPoolEntry<PObjectSpec>,\n): r is ResultPoolEntry<PColumnSpec> {\n  return isPColumnSpec(r.obj);\n}\n\nexport function isPColumnResult<T>(\n  r: ResultPoolEntry<PObject<T>>,\n): r is ResultPoolEntry<PColumn<T>> {\n  return isPColumnSpec(r.obj.spec);\n}\n\nexport function ensurePColumn<T>(obj: PObject<T>): PColumn<T> {\n  if (!isPColumn(obj)) throw new Error(`not a PColumn (kind = ${obj.spec.kind})`);\n  return obj;\n}\n\nexport function mapPObjectData<D1, D2>(pObj: PColumn<D1>, cb: (d: D1) => D2): PColumn<D2>;\nexport function mapPObjectData<D1, D2>(\n  pObj: PColumn<D1> | undefined,\n  cb: (d: D1) => D2\n): PColumn<D2> | undefined;\nexport function mapPObjectData<D1, D2>(pObj: PObject<D1>, cb: (d: D1) => D2): PObject<D2>;\nexport function mapPObjectData<D1, D2>(\n  pObj: PObject<D1> | undefined,\n  cb: (d: D1) => D2\n): PObject<D2> | undefined;\nexport function mapPObjectData<D1, D2>(\n  pObj: PObject<D1> | undefined,\n  cb: (d: D1) => D2,\n): PObject<D2> | undefined {\n  return pObj === undefined\n    ? undefined\n    : {\n        ...pObj,\n        data: cb(pObj.data),\n      };\n}\n\nexport function extractAllColumns<D>(entry: JoinEntry<PColumn<D>>): PColumn<D>[] {\n  const columns = new Map<PObjectId, PColumn<D>>();\n  const addAllColumns = (entry: JoinEntry<PColumn<D>>) => {\n    switch (entry.type) {\n      case 'column':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'slicedColumn':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'artificialColumn':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'inlineColumn':\n        return;\n      case 'full':\n      case 'inner':\n        for (const e of entry.entries) addAllColumns(e);\n        return;\n      case 'outer':\n        addAllColumns(entry.primary);\n        for (const e of entry.secondary) addAllColumns(e);\n        return;\n      default:\n        assertNever(entry);\n    }\n  };\n  addAllColumns(entry);\n  return [...columns.values()];\n}\n"],"names":["assertNever"],"mappings":";;;;AAuCM,SAAU,aAAa,CAAC,IAAiB,EAAA;AAC7C,IAAA,OAAO,IAAI,CAAC,IAAI,KAAK,SAAS;AAChC;AAEM,SAAU,SAAS,CAAI,GAAe,EAAA;AAC1C,IAAA,OAAO,aAAa,CAAC,GAAG,CAAC,IAAI,CAAC;AAChC;AAEM,SAAU,mBAAmB,CACjC,CAA+B,EAAA;AAE/B,IAAA,OAAO,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC;AAC7B;AAEM,SAAU,eAAe,CAC7B,CAA8B,EAAA;IAE9B,OAAO,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC;AAClC;AAEM,SAAU,aAAa,CAAI,GAAe,EAAA;AAC9C,IAAA,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC;QAAE,MAAM,IAAI,KAAK,CAAC,CAAA,sBAAA,EAAyB,GAAG,CAAC,IAAI,CAAC,IAAI,CAAA,CAAA,CAAG,CAAC;AAC/E,IAAA,OAAO,GAAG;AACZ;AAYM,SAAU,cAAc,CAC5B,IAA6B,EAC7B,EAAiB,EAAA;IAEjB,OAAO,IAAI,KAAK;AACd,UAAE;AACF,UAAE;AACE,YAAA,GAAG,IAAI;AACP,YAAA,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC;SACpB;AACP;AAEM,SAAU,iBAAiB,CAAI,KAA4B,EAAA;AAC/D,IAAA,MAAM,OAAO,GAAG,IAAI,GAAG,EAAyB;AAChD,IAAA,MAAM,aAAa,GAAG,CAAC,KAA4B,KAAI;AACrD,QAAA,QAAQ,KAAK,CAAC,IAAI;AAChB,YAAA,KAAK,QAAQ;AACX,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,cAAc;AACjB,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,kBAAkB;AACrB,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,cAAc;gBACjB;AACF,YAAA,KAAK,MAAM;AACX,YAAA,KAAK,OAAO;AACV,gBAAA,KAAK,MAAM,CAAC,IAAI,KAAK,CAAC,OAAO;oBAAE,aAAa,CAAC,CAAC,CAAC;gBAC/C;AACF,YAAA,KAAK,OAAO;AACV,gBAAA,aAAa,CAAC,KAAK,CAAC,OAAO,CAAC;AAC5B,gBAAA,KAAK,MAAM,CAAC,IAAI,KAAK,CAAC,SAAS;oBAAE,aAAa,CAAC,CAAC,CAAC;gBACjD;AACF,YAAA;gBACEA,gBAAW,CAAC,KAAK,CAAC;;AAExB,IAAA,CAAC;IACD,aAAa,CAAC,KAAK,CAAC;AACpB,IAAA,OAAO,CAAC,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC;AAC9B;;;;;;;;;;"}

package/dist/pool/spec.d.ts

@@ -2,7 +2,7 @@ import type { Branded } from '../branding';
 import type { JoinEntry, PColumn, PColumnSpec } from '../drivers';
 import type { ResultPoolEntry } from './entry';
 /** Any object exported into the result pool by the block always have spec attached to it */
-export interface PObjectSpec {
+export type PObjectSpec = {
     /** PObject kind discriminator */
     readonly kind: string;
     /** Name is common part of PObject identity */
@@ -11,7 +11,7 @@ export interface PObjectSpec {
     readonly domain?: Record<string, string>;
     /** Additional information attached to the object */
     readonly annotations?: Record<string, string>;
-}
+};
 /** Stable PObject id */
 export type PObjectId = Branded<string, 'PColumnId'>;
 /**

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package/dist/pool/spec.js.map

@@ -1 +1 @@
-{"version":3,"file":"spec.js","sources":["../../src/pool/spec.ts"],"sourcesContent":["import type { Branded } from '../branding';\nimport type { JoinEntry, PColumn, PColumnSpec } from '../drivers';\nimport { assertNever } from '../util';\nimport type { ResultPoolEntry } from './entry';\n\n/** Any object exported into the result pool by the block always have spec attached to it */\nexport interface PObjectSpec {\n  /** PObject kind discriminator */\n  readonly kind: string;\n\n  /** Name is common part of PObject identity */\n  readonly name: string;\n\n  /** Domain is a set of key-value pairs that can be used to identify the object */\n  readonly domain?: Record<string, string>;\n\n  /** Additional information attached to the object */\n  readonly annotations?: Record<string, string>;\n}\n\n/** Stable PObject id */\nexport type PObjectId = Branded<string, 'PColumnId'>;\n\n/**\n * Full PObject representation.\n *\n * @template Data type of the object referencing or describing the \"data\" part of the PObject\n * */\nexport interface PObject<Data> {\n  /** Fully rendered PObjects are assigned a stable identifier. */\n  readonly id: PObjectId;\n\n  /** PObject spec, allowing it to be found among other PObjects */\n  readonly spec: PObjectSpec;\n\n  /** A handle to data object */\n  readonly data: Data;\n}\n\nexport function isPColumnSpec(spec: PObjectSpec): spec is PColumnSpec {\n  return spec.kind === 'PColumn';\n}\n\nexport function isPColumn<T>(obj: PObject<T>): obj is PColumn<T> {\n  return isPColumnSpec(obj.spec);\n}\n\nexport function isPColumnSpecResult(\n  r: ResultPoolEntry<PObjectSpec>,\n): r is ResultPoolEntry<PColumnSpec> {\n  return isPColumnSpec(r.obj);\n}\n\nexport function isPColumnResult<T>(\n  r: ResultPoolEntry<PObject<T>>,\n): r is ResultPoolEntry<PColumn<T>> {\n  return isPColumnSpec(r.obj.spec);\n}\n\nexport function ensurePColumn<T>(obj: PObject<T>): PColumn<T> {\n  if (!isPColumn(obj)) throw new Error(`not a PColumn (kind = ${obj.spec.kind})`);\n  return obj;\n}\n\nexport function mapPObjectData<D1, D2>(pObj: PColumn<D1>, cb: (d: D1) => D2): PColumn<D2>;\nexport function mapPObjectData<D1, D2>(\n  pObj: PColumn<D1> | undefined,\n  cb: (d: D1) => D2\n): PColumn<D2> | undefined;\nexport function mapPObjectData<D1, D2>(pObj: PObject<D1>, cb: (d: D1) => D2): PObject<D2>;\nexport function mapPObjectData<D1, D2>(\n  pObj: PObject<D1> | undefined,\n  cb: (d: D1) => D2\n): PObject<D2> | undefined;\nexport function mapPObjectData<D1, D2>(\n  pObj: PObject<D1> | undefined,\n  cb: (d: D1) => D2,\n): PObject<D2> | undefined {\n  return pObj === undefined\n    ? undefined\n    : {\n        ...pObj,\n        data: cb(pObj.data),\n      };\n}\n\nexport function extractAllColumns<D>(entry: JoinEntry<PColumn<D>>): PColumn<D>[] {\n  const columns = new Map<PObjectId, PColumn<D>>();\n  const addAllColumns = (entry: JoinEntry<PColumn<D>>) => {\n    switch (entry.type) {\n      case 'column':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'slicedColumn':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'artificialColumn':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'inlineColumn':\n        return;\n      case 'full':\n      case 'inner':\n        for (const e of entry.entries) addAllColumns(e);\n        return;\n      case 'outer':\n        addAllColumns(entry.primary);\n        for (const e of entry.secondary) addAllColumns(e);\n        return;\n      default:\n        assertNever(entry);\n    }\n  };\n  addAllColumns(entry);\n  return [...columns.values()];\n}\n"],"names":[],"mappings":";;AAuCM,SAAU,aAAa,CAAC,IAAiB,EAAA;AAC7C,IAAA,OAAO,IAAI,CAAC,IAAI,KAAK,SAAS;AAChC;AAEM,SAAU,SAAS,CAAI,GAAe,EAAA;AAC1C,IAAA,OAAO,aAAa,CAAC,GAAG,CAAC,IAAI,CAAC;AAChC;AAEM,SAAU,mBAAmB,CACjC,CAA+B,EAAA;AAE/B,IAAA,OAAO,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC;AAC7B;AAEM,SAAU,eAAe,CAC7B,CAA8B,EAAA;IAE9B,OAAO,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC;AAClC;AAEM,SAAU,aAAa,CAAI,GAAe,EAAA;AAC9C,IAAA,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC;QAAE,MAAM,IAAI,KAAK,CAAC,CAAA,sBAAA,EAAyB,GAAG,CAAC,IAAI,CAAC,IAAI,CAAA,CAAA,CAAG,CAAC;AAC/E,IAAA,OAAO,GAAG;AACZ;AAYM,SAAU,cAAc,CAC5B,IAA6B,EAC7B,EAAiB,EAAA;IAEjB,OAAO,IAAI,KAAK;AACd,UAAE;AACF,UAAE;AACE,YAAA,GAAG,IAAI;AACP,YAAA,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC;SACpB;AACP;AAEM,SAAU,iBAAiB,CAAI,KAA4B,EAAA;AAC/D,IAAA,MAAM,OAAO,GAAG,IAAI,GAAG,EAAyB;AAChD,IAAA,MAAM,aAAa,GAAG,CAAC,KAA4B,KAAI;AACrD,QAAA,QAAQ,KAAK,CAAC,IAAI;AAChB,YAAA,KAAK,QAAQ;AACX,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,cAAc;AACjB,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,kBAAkB;AACrB,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,cAAc;gBACjB;AACF,YAAA,KAAK,MAAM;AACX,YAAA,KAAK,OAAO;AACV,gBAAA,KAAK,MAAM,CAAC,IAAI,KAAK,CAAC,OAAO;oBAAE,aAAa,CAAC,CAAC,CAAC;gBAC/C;AACF,YAAA,KAAK,OAAO;AACV,gBAAA,aAAa,CAAC,KAAK,CAAC,OAAO,CAAC;AAC5B,gBAAA,KAAK,MAAM,CAAC,IAAI,KAAK,CAAC,SAAS;oBAAE,aAAa,CAAC,CAAC,CAAC;gBACjD;AACF,YAAA;gBACE,WAAW,CAAC,KAAK,CAAC;;AAExB,IAAA,CAAC;IACD,aAAa,CAAC,KAAK,CAAC;AACpB,IAAA,OAAO,CAAC,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC;AAC9B;;;;"}
+{"version":3,"file":"spec.js","sources":["../../src/pool/spec.ts"],"sourcesContent":["import type { Branded } from '../branding';\nimport type { JoinEntry, PColumn, PColumnSpec } from '../drivers';\nimport { assertNever } from '../util';\nimport type { ResultPoolEntry } from './entry';\n\n/** Any object exported into the result pool by the block always have spec attached to it */\nexport type PObjectSpec = {\n  /** PObject kind discriminator */\n  readonly kind: string;\n\n  /** Name is common part of PObject identity */\n  readonly name: string;\n\n  /** Domain is a set of key-value pairs that can be used to identify the object */\n  readonly domain?: Record<string, string>;\n\n  /** Additional information attached to the object */\n  readonly annotations?: Record<string, string>;\n};\n\n/** Stable PObject id */\nexport type PObjectId = Branded<string, 'PColumnId'>;\n\n/**\n * Full PObject representation.\n *\n * @template Data type of the object referencing or describing the \"data\" part of the PObject\n * */\nexport interface PObject<Data> {\n  /** Fully rendered PObjects are assigned a stable identifier. */\n  readonly id: PObjectId;\n\n  /** PObject spec, allowing it to be found among other PObjects */\n  readonly spec: PObjectSpec;\n\n  /** A handle to data object */\n  readonly data: Data;\n}\n\nexport function isPColumnSpec(spec: PObjectSpec): spec is PColumnSpec {\n  return spec.kind === 'PColumn';\n}\n\nexport function isPColumn<T>(obj: PObject<T>): obj is PColumn<T> {\n  return isPColumnSpec(obj.spec);\n}\n\nexport function isPColumnSpecResult(\n  r: ResultPoolEntry<PObjectSpec>,\n): r is ResultPoolEntry<PColumnSpec> {\n  return isPColumnSpec(r.obj);\n}\n\nexport function isPColumnResult<T>(\n  r: ResultPoolEntry<PObject<T>>,\n): r is ResultPoolEntry<PColumn<T>> {\n  return isPColumnSpec(r.obj.spec);\n}\n\nexport function ensurePColumn<T>(obj: PObject<T>): PColumn<T> {\n  if (!isPColumn(obj)) throw new Error(`not a PColumn (kind = ${obj.spec.kind})`);\n  return obj;\n}\n\nexport function mapPObjectData<D1, D2>(pObj: PColumn<D1>, cb: (d: D1) => D2): PColumn<D2>;\nexport function mapPObjectData<D1, D2>(\n  pObj: PColumn<D1> | undefined,\n  cb: (d: D1) => D2\n): PColumn<D2> | undefined;\nexport function mapPObjectData<D1, D2>(pObj: PObject<D1>, cb: (d: D1) => D2): PObject<D2>;\nexport function mapPObjectData<D1, D2>(\n  pObj: PObject<D1> | undefined,\n  cb: (d: D1) => D2\n): PObject<D2> | undefined;\nexport function mapPObjectData<D1, D2>(\n  pObj: PObject<D1> | undefined,\n  cb: (d: D1) => D2,\n): PObject<D2> | undefined {\n  return pObj === undefined\n    ? undefined\n    : {\n        ...pObj,\n        data: cb(pObj.data),\n      };\n}\n\nexport function extractAllColumns<D>(entry: JoinEntry<PColumn<D>>): PColumn<D>[] {\n  const columns = new Map<PObjectId, PColumn<D>>();\n  const addAllColumns = (entry: JoinEntry<PColumn<D>>) => {\n    switch (entry.type) {\n      case 'column':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'slicedColumn':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'artificialColumn':\n        columns.set(entry.column.id, entry.column);\n        return;\n      case 'inlineColumn':\n        return;\n      case 'full':\n      case 'inner':\n        for (const e of entry.entries) addAllColumns(e);\n        return;\n      case 'outer':\n        addAllColumns(entry.primary);\n        for (const e of entry.secondary) addAllColumns(e);\n        return;\n      default:\n        assertNever(entry);\n    }\n  };\n  addAllColumns(entry);\n  return [...columns.values()];\n}\n"],"names":[],"mappings":";;AAuCM,SAAU,aAAa,CAAC,IAAiB,EAAA;AAC7C,IAAA,OAAO,IAAI,CAAC,IAAI,KAAK,SAAS;AAChC;AAEM,SAAU,SAAS,CAAI,GAAe,EAAA;AAC1C,IAAA,OAAO,aAAa,CAAC,GAAG,CAAC,IAAI,CAAC;AAChC;AAEM,SAAU,mBAAmB,CACjC,CAA+B,EAAA;AAE/B,IAAA,OAAO,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC;AAC7B;AAEM,SAAU,eAAe,CAC7B,CAA8B,EAAA;IAE9B,OAAO,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC;AAClC;AAEM,SAAU,aAAa,CAAI,GAAe,EAAA;AAC9C,IAAA,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC;QAAE,MAAM,IAAI,KAAK,CAAC,CAAA,sBAAA,EAAyB,GAAG,CAAC,IAAI,CAAC,IAAI,CAAA,CAAA,CAAG,CAAC;AAC/E,IAAA,OAAO,GAAG;AACZ;AAYM,SAAU,cAAc,CAC5B,IAA6B,EAC7B,EAAiB,EAAA;IAEjB,OAAO,IAAI,KAAK;AACd,UAAE;AACF,UAAE;AACE,YAAA,GAAG,IAAI;AACP,YAAA,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC;SACpB;AACP;AAEM,SAAU,iBAAiB,CAAI,KAA4B,EAAA;AAC/D,IAAA,MAAM,OAAO,GAAG,IAAI,GAAG,EAAyB;AAChD,IAAA,MAAM,aAAa,GAAG,CAAC,KAA4B,KAAI;AACrD,QAAA,QAAQ,KAAK,CAAC,IAAI;AAChB,YAAA,KAAK,QAAQ;AACX,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,cAAc;AACjB,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,kBAAkB;AACrB,gBAAA,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,EAAE,KAAK,CAAC,MAAM,CAAC;gBAC1C;AACF,YAAA,KAAK,cAAc;gBACjB;AACF,YAAA,KAAK,MAAM;AACX,YAAA,KAAK,OAAO;AACV,gBAAA,KAAK,MAAM,CAAC,IAAI,KAAK,CAAC,OAAO;oBAAE,aAAa,CAAC,CAAC,CAAC;gBAC/C;AACF,YAAA,KAAK,OAAO;AACV,gBAAA,aAAa,CAAC,KAAK,CAAC,OAAO,CAAC;AAC5B,gBAAA,KAAK,MAAM,CAAC,IAAI,KAAK,CAAC,SAAS;oBAAE,aAAa,CAAC,CAAC,CAAC;gBACjD;AACF,YAAA;gBACE,WAAW,CAAC,KAAK,CAAC;;AAExB,IAAA,CAAC;IACD,aAAa,CAAC,KAAK,CAAC;AACpB,IAAA,OAAO,CAAC,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC;AAC9B;;;;"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@milaboratories/pl-model-common",
-  "version": "1.21.4",
+  "version": "1.21.5",
   "description": "Platforma SDK Model",
   "type": "module",
   "types": "./dist/index.d.ts",
@@ -24,18 +24,18 @@
   "devDependencies": {
     "eslint": "^9.25.1",
     "typescript": "~5.6.3",
-    "vitest": "^2.1.9",
-    "@milaboratories/build-configs": "1.0.8",
-    "@milaboratories/ts-builder": "1.0.5",
+    "vitest": "^4.0.7",
     "@platforma-sdk/eslint-config": "1.1.0",
-    "@milaboratories/ts-configs": "1.0.6"
+    "@milaboratories/ts-configs": "1.0.6",
+    "@milaboratories/build-configs": "1.0.8",
+    "@milaboratories/ts-builder": "1.0.5"
   },
   "scripts": {
     "type-check": "ts-builder types --target node",
     "build": "ts-builder build --target node",
     "watch": "ts-builder build --target node --watch",
     "lint": "eslint .",
-    "test": "vitest",
+    "test": "vitest run",
     "do-pack": "rm -f *.tgz && pnpm pack && mv *.tgz package.tgz"
   }
 }

package/src/drivers/pframe/pframe.ts

@@ -1,7 +1,7 @@
 import type { PObjectId } from '../../pool';
 import type { TableRange } from './data_types';
 import type { FindColumnsRequest, FindColumnsResponse } from './find_columns';
-import type { PColumn, PColumnIdAndSpec, PColumnSpec } from './spec/spec';
+import type { PColumnIdAndSpec, PColumnSpec } from './spec/spec';
 import type {
   CalculateTableDataRequest,
   CalculateTableDataResponse,
@@ -33,4 +33,4 @@ export interface PFrame {
 }
 
 /** Information required to instantiate a PFrame. */
-export type PFrameDef<Data> = PColumn<Data>[];
+export type PFrameDef<Col> = Col[];

package/src/drivers/pframe/spec/spec.ts

@@ -270,7 +270,7 @@ export function readAnnotationJson<T extends keyof AnnotationJson>(
  * Each record inside a PColumn is addressed by a unique tuple of values set for
  * all the axes specified in the column spec.
  */
-export interface AxisSpec {
+export type AxisSpec = {
   /** Type of the axis value. Should not use non-key types like float or double. */
   readonly type: ValueType;
 
@@ -304,7 +304,7 @@ export interface AxisSpec {
    * in the list that defines the structure of the data model.
    */
   readonly parentAxes?: number[];
-}
+};
 
 /** Parents are specs, not indexes; normalized axis can be used considering its parents independently from column */
 export interface AxisSpecNormalized extends Omit<AxisSpec, 'parentAxes'> {
@@ -512,7 +512,7 @@ export const PColumnName = {
  *
  * Each element in tuple correspond to the axis having the same index in axesSpec.
  */
-export interface PUniversalColumnSpec extends PObjectSpec {
+export type PUniversalColumnSpec = PObjectSpec & {
   /** Defines specific type of BObject, the most generic type of unit of
    * information in Platforma Project. */
   readonly kind: 'PColumn';
@@ -536,7 +536,7 @@ export interface PUniversalColumnSpec extends PObjectSpec {
 
   /** Axes specifications */
   readonly axesSpec: AxesSpec;
-}
+};
 
 /**
  * Specification of a data column.
@@ -546,10 +546,10 @@ export interface PUniversalColumnSpec extends PObjectSpec {
  * values like files or other abstract data types. Data columns are optimized for storing and processing
  * basic tabular data.
  */
-export interface PDataColumnSpec extends PUniversalColumnSpec {
+export type PDataColumnSpec = PUniversalColumnSpec & {
   /** Type of column values */
   readonly valueType: ValueType;
-}
+};
 
 // @todo: change this to PUniversalColumnSpec
 export type PColumnSpec = PDataColumnSpec;

package/src/json.ts

@@ -1,37 +1,51 @@
 import canonicalize from 'canonicalize';
 
-type JsonPrimitive = string | number | boolean | null | undefined;
+type JsonPrimitive = string | number | boolean | null;
 
-type JsonValue = JsonPrimitive | JsonValue[] | {
-  [key: string]: JsonValue;
-};
+type JsonValue = JsonPrimitive | JsonValue[] | { [key: string]: JsonValue };
+
+export type JsonSerializable =
+  | JsonPrimitive
+  | JsonSerializable[]
+  | { [key: string]: JsonSerializable }
+  | { toJSON(): JsonValue };
 
 // eslint-disable-next-line @typescript-eslint/no-unsafe-function-type
 type NotAssignableToJson = bigint | symbol | Function;
 
-export type JsonCompatible<T> = unknown extends T ? unknown : {
-  [P in keyof T]:
-  T[P] extends JsonValue ? T[P] :
-    T[P] extends NotAssignableToJson ? never :
-      JsonCompatible<T[P]>;
-};
+export type JsonCompatible<T> = unknown extends T ? unknown
+  : [T] extends [JsonValue] ? T
+      : [T] extends [NotAssignableToJson] ? never
+          : {
+              [P in keyof T]: [Exclude<T[P], undefined>] extends [JsonValue] ? T[P]
+                : [Exclude<T[P], undefined>] extends [NotAssignableToJson] ? never
+                    : JsonCompatible<T[P]>;
+            };
 
 export type StringifiedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {
   __json_stringified: T;
 };
 
-export function stringifyJson<T>(value: JsonCompatible<T>): StringifiedJson<T> {
-  return JSON.stringify(value)! as StringifiedJson<T>;
+export function stringifyJson<T>(value: JsonCompatible<T>): StringifiedJson<T>;
+export function stringifyJson<T extends JsonSerializable>(value: T): string;
+export function stringifyJson(value: unknown): string {
+  return JSON.stringify(value);
 }
 
 export type CanonicalizedJson<T = unknown> = JsonCompatible<T> extends never ? never : string & {
   __json_canonicalized: T;
 };
 
-export function canonicalizeJson<T>(value: JsonCompatible<T>): CanonicalizedJson<T> {
-  return canonicalize(value)! as CanonicalizedJson<T>;
+export function canonicalizeJson<T>(value: JsonCompatible<T>): CanonicalizedJson<T>;
+export function canonicalizeJson<T extends JsonSerializable>(value: T): string;
+export function canonicalizeJson(value: unknown): string {
+  return canonicalize(value)!;
 }
 
 export function parseJson<T>(value: StringifiedJson<T> | CanonicalizedJson<T>): T {
   return JSON.parse(value) as T;
 }
+
+export function bigintReplacer(_key: string, value: unknown): unknown {
+  return typeof value === 'bigint' ? value.toString() : value;
+}

package/src/pool/spec.ts

@@ -4,7 +4,7 @@ import { assertNever } from '../util';
 import type { ResultPoolEntry } from './entry';
 
 /** Any object exported into the result pool by the block always have spec attached to it */
-export interface PObjectSpec {
+export type PObjectSpec = {
   /** PObject kind discriminator */
   readonly kind: string;
 
@@ -16,7 +16,7 @@ export interface PObjectSpec {
 
   /** Additional information attached to the object */
   readonly annotations?: Record<string, string>;
-}
+};
 
 /** Stable PObject id */
 export type PObjectId = Branded<string, 'PColumnId'>;