@milaboratories/pl-deployments 1.1.6 → 1.1.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/common/pl_binary.d.ts +2 -0
- package/dist/common/pl_binary.d.ts.map +1 -1
- package/dist/common/pl_binary_download.d.ts +2 -4
- package/dist/common/pl_binary_download.d.ts.map +1 -1
- package/dist/index.js +8 -8
- package/dist/index.js.map +1 -1
- package/dist/index.mjs +144 -141
- package/dist/index.mjs.map +1 -1
- package/dist/local/pl.d.ts.map +1 -1
- package/dist/ssh/pl.d.ts +6 -2
- package/dist/ssh/pl.d.ts.map +1 -1
- package/package.json +5 -5
- package/src/common/pl_binary.ts +11 -2
- package/src/common/pl_binary_download.ts +26 -55
- package/src/local/pl.ts +3 -1
- package/src/ssh/__tests__/pl-docker.test.ts +18 -9
- package/src/ssh/pl.ts +9 -4
package/src/common/pl_binary.ts
CHANGED
|
@@ -1,8 +1,10 @@
|
|
|
1
1
|
import type { MiLogger } from '@milaboratories/ts-helpers';
|
|
2
2
|
import { assertNever } from '@milaboratories/ts-helpers';
|
|
3
|
-
import {
|
|
3
|
+
import { downloadBinary } from './pl_binary_download';
|
|
4
4
|
import { getDefaultPlVersion } from './pl_version';
|
|
5
5
|
import os from 'os';
|
|
6
|
+
import upath from 'upath';
|
|
7
|
+
import { newOs, OSType } from './os_and_arch';
|
|
6
8
|
|
|
7
9
|
/** Shows how the binary should be got. */
|
|
8
10
|
export type PlBinarySource = PlBinarySourceDownload | PlBinarySourceLocal;
|
|
@@ -28,7 +30,8 @@ export async function resolveLocalPlBinaryPath(
|
|
|
28
30
|
): Promise<string> {
|
|
29
31
|
switch (src.type) {
|
|
30
32
|
case 'Download':
|
|
31
|
-
|
|
33
|
+
const ops = await downloadBinary(logger, downloadDir, 'pl', `pl-${src.version}`, os.arch(), os.platform());
|
|
34
|
+
return upath.join(ops.baseName, 'binaries', osToBinaryName[newOs(os.platform())]);
|
|
32
35
|
|
|
33
36
|
case 'Local':
|
|
34
37
|
return src.path;
|
|
@@ -37,3 +40,9 @@ export async function resolveLocalPlBinaryPath(
|
|
|
37
40
|
assertNever(src);
|
|
38
41
|
}
|
|
39
42
|
}
|
|
43
|
+
|
|
44
|
+
export const osToBinaryName: Record<OSType, string> = {
|
|
45
|
+
linux: 'platforma',
|
|
46
|
+
macos: 'platforma',
|
|
47
|
+
windows: 'platforma.exe',
|
|
48
|
+
};
|
|
@@ -11,13 +11,19 @@ import decompress from 'decompress';
|
|
|
11
11
|
import type { ArchType, OSType } from './os_and_arch';
|
|
12
12
|
import { newOs, newArch } from './os_and_arch';
|
|
13
13
|
|
|
14
|
+
const cdn = 'https://cdn.platforma.bio/software';
|
|
15
|
+
// We'll download things from Global Access if downloading from CDN has failed
|
|
16
|
+
// (it might be that it's blocked from the company's network.)
|
|
17
|
+
const gaCdn = 'https://cdn-ga.pl-open.science/software';
|
|
18
|
+
|
|
14
19
|
export type DownloadBinaryResult = {
|
|
15
20
|
archiveUrl: string;
|
|
21
|
+
alternativeArchiveGAUrl: string;
|
|
22
|
+
wasDownloadedFrom?: string;
|
|
16
23
|
archivePath: string;
|
|
17
24
|
archiveType: ArchiveType;
|
|
18
25
|
targetFolder: string;
|
|
19
26
|
baseName: string;
|
|
20
|
-
binaryPath?: string;
|
|
21
27
|
};
|
|
22
28
|
|
|
23
29
|
export async function downloadBinaryNoExtract(
|
|
@@ -29,9 +35,15 @@ export async function downloadBinaryNoExtract(
|
|
|
29
35
|
platform: string,
|
|
30
36
|
): Promise<DownloadBinaryResult> {
|
|
31
37
|
const opts = getPathsForDownload(softwareName, tgzName, baseDir, newArch(arch), newOs(platform));
|
|
32
|
-
const { archiveUrl, archivePath } = opts;
|
|
38
|
+
const { archiveUrl, alternativeArchiveGAUrl, archivePath } = opts;
|
|
33
39
|
|
|
34
|
-
|
|
40
|
+
try {
|
|
41
|
+
await downloadArchive(logger, archiveUrl, archivePath);
|
|
42
|
+
opts.wasDownloadedFrom = archiveUrl;
|
|
43
|
+
} catch (e: unknown) {
|
|
44
|
+
await downloadArchive(logger, alternativeArchiveGAUrl, archivePath);
|
|
45
|
+
opts.wasDownloadedFrom = alternativeArchiveGAUrl;
|
|
46
|
+
}
|
|
35
47
|
|
|
36
48
|
return opts;
|
|
37
49
|
}
|
|
@@ -45,25 +57,16 @@ export async function downloadBinary(
|
|
|
45
57
|
platform: string,
|
|
46
58
|
): Promise<DownloadBinaryResult> {
|
|
47
59
|
const opts = getPathsForDownload(softwareName, archiveName, baseDir, newArch(arch), newOs(platform));
|
|
48
|
-
const { archiveUrl, archivePath, archiveType, targetFolder, baseName } = opts;
|
|
49
|
-
|
|
50
|
-
await downloadArchive(logger, archiveUrl, archivePath);
|
|
51
|
-
await extractArchive(logger, archivePath, archiveType, targetFolder);
|
|
60
|
+
const { archiveUrl, alternativeArchiveGAUrl, archivePath, archiveType, targetFolder, baseName } = opts;
|
|
52
61
|
|
|
53
|
-
|
|
54
|
-
|
|
55
|
-
|
|
56
|
-
|
|
57
|
-
|
|
58
|
-
|
|
59
|
-
|
|
60
|
-
arch: string,
|
|
61
|
-
platform: string,
|
|
62
|
-
): Promise<DownloadBinaryResult> {
|
|
63
|
-
const opts = localDownloadPlOptions(plVersion, baseDir, newArch(arch), newOs(platform));
|
|
64
|
-
const { archiveUrl, archivePath, archiveType, targetFolder, binaryPath } = opts;
|
|
62
|
+
try {
|
|
63
|
+
await downloadArchive(logger, archiveUrl, archivePath);
|
|
64
|
+
opts.wasDownloadedFrom = archiveUrl;
|
|
65
|
+
} catch (e: unknown) {
|
|
66
|
+
await downloadArchive(logger, alternativeArchiveGAUrl, archivePath);
|
|
67
|
+
opts.wasDownloadedFrom = alternativeArchiveGAUrl;
|
|
68
|
+
}
|
|
65
69
|
|
|
66
|
-
await downloadArchive(logger, archiveUrl, archivePath);
|
|
67
70
|
await extractArchive(logger, archivePath, archiveType, targetFolder);
|
|
68
71
|
|
|
69
72
|
return opts;
|
|
@@ -80,13 +83,15 @@ function getPathsForDownload(
|
|
|
80
83
|
const archiveType = osToArchiveType[os];
|
|
81
84
|
|
|
82
85
|
const archiveFileName = `${baseName}.${archiveType}`;
|
|
83
|
-
const archiveUrl =
|
|
86
|
+
const archiveUrl = `${cdn}/${softwareName}/${os}/${archiveFileName}`;
|
|
87
|
+
const alternativeArchiveGAUrl = `${gaCdn}/${softwareName}/${os}/${archiveFileName}`;
|
|
84
88
|
const archivePath = upath.join(baseDir, archiveFileName);
|
|
85
89
|
// folder where binary distribution of pl will be unpacked
|
|
86
90
|
const targetFolder = upath.join(baseDir, baseName);
|
|
87
91
|
|
|
88
92
|
return {
|
|
89
93
|
archiveUrl,
|
|
94
|
+
alternativeArchiveGAUrl,
|
|
90
95
|
archivePath,
|
|
91
96
|
archiveType,
|
|
92
97
|
targetFolder,
|
|
@@ -94,34 +99,6 @@ function getPathsForDownload(
|
|
|
94
99
|
};
|
|
95
100
|
}
|
|
96
101
|
|
|
97
|
-
export function localDownloadPlOptions(
|
|
98
|
-
plVersion: string,
|
|
99
|
-
baseDir: string,
|
|
100
|
-
arch: ArchType,
|
|
101
|
-
os: OSType,
|
|
102
|
-
): DownloadBinaryResult {
|
|
103
|
-
const baseName = `pl-${plVersion}-${arch}`;
|
|
104
|
-
const archiveType = osToArchiveType[os];
|
|
105
|
-
|
|
106
|
-
const archiveFileName = `${baseName}.${archiveType}`;
|
|
107
|
-
const archiveUrl = `https://cdn.platforma.bio/software/pl/${os}/${archiveFileName}`;
|
|
108
|
-
const archivePath = upath.join(baseDir, archiveFileName);
|
|
109
|
-
|
|
110
|
-
// folder where binary distribution of pl will be unpacked
|
|
111
|
-
const targetFolder = upath.join(baseDir, baseName);
|
|
112
|
-
|
|
113
|
-
const binaryPath = upath.join(baseName, 'binaries', osToBinaryName[os]);
|
|
114
|
-
|
|
115
|
-
return {
|
|
116
|
-
archiveUrl,
|
|
117
|
-
archivePath,
|
|
118
|
-
archiveType,
|
|
119
|
-
targetFolder,
|
|
120
|
-
binaryPath,
|
|
121
|
-
baseName,
|
|
122
|
-
};
|
|
123
|
-
}
|
|
124
|
-
|
|
125
102
|
export type DownloadInfo = {
|
|
126
103
|
dstArchive?: string;
|
|
127
104
|
fileExisted?: boolean;
|
|
@@ -250,9 +227,3 @@ const osToArchiveType: Record<OSType, ArchiveType> = {
|
|
|
250
227
|
macos: 'tgz',
|
|
251
228
|
windows: 'zip',
|
|
252
229
|
};
|
|
253
|
-
|
|
254
|
-
const osToBinaryName: Record<OSType, string> = {
|
|
255
|
-
linux: 'platforma',
|
|
256
|
-
macos: 'platforma',
|
|
257
|
-
windows: 'platforma.exe',
|
|
258
|
-
};
|
package/src/local/pl.ts
CHANGED
|
@@ -162,7 +162,9 @@ export async function localPlatformaInit(logger: MiLogger, _ops: LocalPlOptions)
|
|
|
162
162
|
logger.info(`writing configuration '${configPath}'...`);
|
|
163
163
|
await fsp.writeFile(configPath, ops.config);
|
|
164
164
|
|
|
165
|
-
const
|
|
165
|
+
const plBinPath = upath.join(workDir, 'binaries');
|
|
166
|
+
const baseBinaryPath = await resolveLocalPlBinaryPath(logger, plBinPath, ops.plBinary);
|
|
167
|
+
|
|
166
168
|
const binaryPath = trace('binaryPath', upath.join('binaries', baseBinaryPath));
|
|
167
169
|
|
|
168
170
|
const processOpts: ProcessOptions = {
|
|
@@ -5,7 +5,7 @@ import upath from 'upath';
|
|
|
5
5
|
import { getDefaultPlVersion } from '../../common/pl_version';
|
|
6
6
|
import { existsSync, unlinkSync, rmSync } from 'fs';
|
|
7
7
|
import { newArch } from '../../common/os_and_arch';
|
|
8
|
-
import { downloadBinary
|
|
8
|
+
import { downloadBinary } from '../../common/pl_binary_download';
|
|
9
9
|
import { ConsoleLoggerAdapter } from '@milaboratories/ts-helpers';
|
|
10
10
|
import * as plpath from '../pl_paths';
|
|
11
11
|
|
|
@@ -39,12 +39,15 @@ describe('SshPl', async () => {
|
|
|
39
39
|
expect(platformInfo).toHaveProperty('platform');
|
|
40
40
|
expect(platformInfo).toHaveProperty('arch');
|
|
41
41
|
|
|
42
|
-
expect(platformInfo?.arch).toBe('x86_64');
|
|
42
|
+
// expect(platformInfo?.arch).toBe('x86_64');
|
|
43
43
|
expect(platformInfo?.platform).toBe('Linux');
|
|
44
44
|
});
|
|
45
45
|
|
|
46
46
|
it('Check start/stop cmd', async () => {
|
|
47
|
-
await sshPl.platformaInit(
|
|
47
|
+
await sshPl.platformaInit({
|
|
48
|
+
localWorkdir: downloadDestination,
|
|
49
|
+
license: {type: 'env'},
|
|
50
|
+
});
|
|
48
51
|
expect(await sshPl.isAlive()).toBe(true);
|
|
49
52
|
|
|
50
53
|
await sshPl.stop();
|
|
@@ -71,7 +74,10 @@ describe('SshPl', async () => {
|
|
|
71
74
|
});
|
|
72
75
|
|
|
73
76
|
it('platformaInit', async () => {
|
|
74
|
-
const result = await sshPl.platformaInit(
|
|
77
|
+
const result = await sshPl.platformaInit({
|
|
78
|
+
localWorkdir: downloadDestination,
|
|
79
|
+
license: { type: 'env' },
|
|
80
|
+
});
|
|
75
81
|
|
|
76
82
|
const remoteHome = await sshPl.getUserHomeDirectory();
|
|
77
83
|
|
|
@@ -84,10 +90,10 @@ describe('SshPl', async () => {
|
|
|
84
90
|
it('Transfer Platforma to server', async () => {
|
|
85
91
|
const arch = await sshPl.getArch();
|
|
86
92
|
|
|
87
|
-
const plPath = await
|
|
93
|
+
const plPath = await downloadBinary(
|
|
88
94
|
new ConsoleLoggerAdapter(),
|
|
89
95
|
downloadDestination,
|
|
90
|
-
getDefaultPlVersion()
|
|
96
|
+
'pl', `pl-${getDefaultPlVersion()}`,
|
|
91
97
|
arch.arch,
|
|
92
98
|
arch.platform,
|
|
93
99
|
);
|
|
@@ -104,7 +110,10 @@ describe('SshPl', async () => {
|
|
|
104
110
|
});
|
|
105
111
|
|
|
106
112
|
it('Get free port', async () => {
|
|
107
|
-
await sshPl
|
|
113
|
+
await sshPl.platformaInit({
|
|
114
|
+
localWorkdir: downloadDestination,
|
|
115
|
+
license: { type: 'env' },
|
|
116
|
+
})
|
|
108
117
|
const isAlive = await sshPl?.isAlive();
|
|
109
118
|
expect(isAlive).toBe(true);
|
|
110
119
|
|
|
@@ -154,10 +163,10 @@ describe('SshPl download binaries', async () => {
|
|
|
154
163
|
it('Download pl. We have archive and extracted data', async () => {
|
|
155
164
|
const arch = await sshPl.getArch();
|
|
156
165
|
|
|
157
|
-
const result = await
|
|
166
|
+
const result = await downloadBinary(
|
|
158
167
|
new ConsoleLoggerAdapter(),
|
|
159
168
|
downloadDestination,
|
|
160
|
-
getDefaultPlVersion()
|
|
169
|
+
'pl', `pl-${getDefaultPlVersion()}`,
|
|
161
170
|
arch.arch,
|
|
162
171
|
arch.platform,
|
|
163
172
|
);
|
package/src/ssh/pl.ts
CHANGED
|
@@ -9,7 +9,7 @@ import * as plpath from './pl_paths';
|
|
|
9
9
|
import { getDefaultPlVersion } from '../common/pl_version';
|
|
10
10
|
|
|
11
11
|
import net from 'net';
|
|
12
|
-
import type { SshPlConfigGenerationResult } from '@milaboratories/pl-config';
|
|
12
|
+
import type { PlLicenseMode, SshPlConfigGenerationResult } from '@milaboratories/pl-config';
|
|
13
13
|
import { generateSshPlConfigs, getFreePort } from '@milaboratories/pl-config';
|
|
14
14
|
import { supervisorStatus, supervisorStop as supervisorCtlShutdown, generateSupervisordConfig, supervisorCtlStart } from './supervisord';
|
|
15
15
|
|
|
@@ -98,8 +98,8 @@ export class SshPl {
|
|
|
98
98
|
return true;
|
|
99
99
|
}
|
|
100
100
|
|
|
101
|
-
public async platformaInit(
|
|
102
|
-
const state: PlatformaInitState = { localWorkdir };
|
|
101
|
+
public async platformaInit(ops: SshPlConfig): Promise<SshInitReturnTypes> {
|
|
102
|
+
const state: PlatformaInitState = { localWorkdir: ops.localWorkdir };
|
|
103
103
|
|
|
104
104
|
try {
|
|
105
105
|
state.arch = await this.getArch();
|
|
@@ -115,7 +115,7 @@ export class SshPl {
|
|
|
115
115
|
}
|
|
116
116
|
|
|
117
117
|
const downloadRes = await this.downloadBinariesAndUploadToTheServer(
|
|
118
|
-
localWorkdir, state.remoteHome, state.arch,
|
|
118
|
+
ops.localWorkdir, state.remoteHome, state.arch,
|
|
119
119
|
);
|
|
120
120
|
state.binPaths = { ...downloadRes, history: undefined };
|
|
121
121
|
state.downloadedBinaries = downloadRes.history;
|
|
@@ -428,6 +428,11 @@ export type SshPlatformaPorts = {
|
|
|
428
428
|
|
|
429
429
|
type Arch = { platform: string; arch: string };
|
|
430
430
|
|
|
431
|
+
export type SshPlConfig = {
|
|
432
|
+
localWorkdir: string;
|
|
433
|
+
license: PlLicenseMode;
|
|
434
|
+
}
|
|
435
|
+
|
|
431
436
|
export type SshInitReturnTypes = {
|
|
432
437
|
plUser: string;
|
|
433
438
|
plPassword: string;
|