@milaboratories/pframes-rs-node 1.0.108 → 1.0.109

package/export/tests/test_data/complex_join/export.cloneset.ReadsCount.datainfo

@@ -0,0 +1,86 @@
+{
+  "type": "JsonPartitioned",
+  "partitionKeyLength": 2,
+  "parts": {
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+    "[\"trb\",\"XQXJLQU5XFX45SPRI6GX7XOP\"]": "export.cloneset.ReadsCount.7IFCRZFNQ62AIPBKYYWNJKLP.jdata",
+    "[\"trb\",\"YMNIXEH5ZXZSL4VDDUNSUKLB\"]": "export.cloneset.ReadsCount.LXBE5P62YKG5UDJGJRL6MSQC.jdata",
+    "[\"trb\",\"YNF3R7ZIWRTNXHQWS53KEWC7\"]": "export.cloneset.ReadsCount.VCKGU2COVX6O3RUXNRC7FRCJ.jdata",
+    "[\"trb\",\"YVJNUJW2L2SDQSY6ZQ3SNCUY\"]": "export.cloneset.ReadsCount.UXO4UE2Q7HO42SNSO4DULKJJ.jdata",
+    "[\"trb\",\"YXPTTYI2E46KL6DSHF663SUS\"]": "export.cloneset.ReadsCount.SOVBQDZPBYCVZTRZF3CXHWOW.jdata",
+    "[\"trb\",\"ZHRGCH2EYTUMYJN65RMX5DPN\"]": "export.cloneset.ReadsCount.3K6KCP5JDGW4X7DXT5RF6ZAF.jdata",
+    "[\"trb\",\"ZN4DY2AJ2ZRFNBJ6B4TEOQAX\"]": "export.cloneset.ReadsCount.NWX7DKTFXRVH4ZYUTZULRDWT.jdata"
+  }
+}

package/export/tests/test_data/complex_join/export.cloneset.ReadsCount.spec

@@ -0,0 +1,37 @@
+{
+  "kind": "PColumn",
+  "valueType": "Long",
+  "axesSpec": [
+    {
+      "type": "String",
+      "name": "mixcr.com/chain",
+      "annotations": {
+        "pl7.app/axisNature": "scaleCompatible",
+        "pl7.app/id": "Cloneset.Chain",
+        "pl7.app/label": "Chain",
+        "pl7.app/valuesDiversity": "Low"
+      }
+    },
+    {
+      "type": "String",
+      "name": "pl7.app/sampleId",
+      "domain": { "pl7.app/blockId": "00-SamplesAndData" },
+      "annotations": { "pl7.app/label": "Sample id" }
+    },
+    {
+      "type": "Int",
+      "name": "mixcr.com/cloneId",
+      "domain": { "pl7.app/gateId": "gateId" },
+      "parentAxes": [1],
+      "annotations": { "pl7.app/label": "Clone id" }
+    }
+  ],
+  "name": "Cloneset.Count.Read",
+  "annotations": {
+    "mixcr.com/abundanceMeasure": "Read",
+    "mixcr.com/isAbundance": "true",
+    "pl7.app/id": "Cloneset.Count.Read",
+    "pl7.app/isWeight": "true",
+    "pl7.app/label": "Read count"
+  }
+}

package/export/tests/test_data/complex_join/metadata.7ZNW7LBUDMBSQJ26KYSSTBPJ.datainfo

@@ -0,0 +1,5 @@
+{
+  "type": "JsonPartitioned",
+  "partitionKeyLength": 0,
+  "parts": { "[]": "metadata.7ZNW7LBUDMBSQJ26KYSSTBPJ.jdata" }
+}

package/export/tests/test_data/complex_join/metadata.7ZNW7LBUDMBSQJ26KYSSTBPJ.jdata

@@ -0,0 +1,82 @@
+{
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+  "[\"QSGI5TRXZ5WP4VGJ44W7RX26\"]": "Donor1",
+  "[\"R6M4WOB7A2CXWSPEBJI7VSR7\"]": "Donor273",
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+  "[\"XBDWUTIFYF6N42BHCI6L4BYT\"]": "Donor311",
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+  "[\"XL2F2F67E4BR33EMLUUX4XWA\"]": "Donor145",
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+  "[\"YNF3R7ZIWRTNXHQWS53KEWC7\"]": "Donor17",
+  "[\"YVJNUJW2L2SDQSY6ZQ3SNCUY\"]": "Donor311",
+  "[\"YXPTTYI2E46KL6DSHF663SUS\"]": "Donor105",
+  "[\"ZHRGCH2EYTUMYJN65RMX5DPN\"]": "Donor311",
+  "[\"ZN4DY2AJ2ZRFNBJ6B4TEOQAX\"]": "Donor157"
+}

package/export/tests/test_data/complex_join/metadata.7ZNW7LBUDMBSQJ26KYSSTBPJ.spec

@@ -0,0 +1,14 @@
+{
+  "kind": "PColumn",
+  "valueType": "String",
+  "axesSpec": [
+    {
+      "type": "String",
+      "name": "pl7.app/sampleId",
+      "domain": { "pl7.app/blockId": "00-SamplesAndData" },
+      "annotations": { "pl7.app/label": "Sample id" }
+    }
+  ],
+  "name": "metadata.7ZNW7LBUDMBSQJ26KYSSTBPJ",
+  "annotations": { "pl7.app/isMetadata": "true", "pl7.app/label": "Donor Id" }
+}

package/export/tests/test_data/complex_join/request.json

@@ -0,0 +1,43 @@
+{
+  "src": {
+    "type": "outer",
+    "primary": {
+      "type": "inner",
+      "entries": [
+        {
+          "type": "column",
+          "columnId": "export.cloneset.CDR3_length_aa",
+          "qualifications": []
+        },
+        {
+          "type": "column",
+          "columnId": "export.cloneset.ReadsCount",
+          "qualifications": []
+        }
+      ]
+    },
+    "secondary": [
+      {
+        "type": "column",
+        "columnId": "metadata.7ZNW7LBUDMBSQJ26KYSSTBPJ",
+        "qualifications": []
+      }
+    ]
+  },
+  "filters": [
+    {
+      "type": "bySingleColumnV2",
+      "column": {
+        "type": "axis",
+        "id": {
+          "type": "String",
+          "name": "mixcr.com/chain"
+        }
+      },
+      "predicate": {
+        "operator": "Equal",
+        "reference": "trb"
+      }
+    }
+  ]
+}

package/export/tests/test_data/create_table_request_1/column.datainfo

@@ -0,0 +1,7 @@
+{
+  "type": "Json",
+  "keyLength": 1,
+  "data": {
+    "[10]": 10.0
+  }
+}

package/export/tests/test_data/create_table_request_1/column.spec

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "name": "column",
+  "valueType": "Float",
+  "axesSpec": [
+    {
+      "name": "axis",
+      "type": "Int"
+    }
+  ]
+}

package/export/tests/test_data/create_table_request_1/request.json

@@ -0,0 +1,8 @@
+{
+  "src": {
+    "type": "column",
+    "columnId": "column",
+    "qualifications": []
+  },
+  "filters": []
+}

package/export/tests/test_data/create_table_request_2/column.datainfo

@@ -0,0 +1,7 @@
+{
+  "type": "Json",
+  "keyLength": 1,
+  "data": {
+    "[10]": 10.0
+  }
+}

package/export/tests/test_data/create_table_request_2/column.spec

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "name": "column",
+  "valueType": "Double",
+  "axesSpec": [
+    {
+      "name": "axis",
+      "type": "Long"
+    }
+  ]
+}

package/export/tests/test_data/create_table_request_2/request.json

@@ -0,0 +1,8 @@
+{
+  "src": {
+    "type": "column",
+    "columnId": "column",
+    "qualifications": []
+  },
+  "filters": []
+}

package/export/tests/test_data/create_table_request_3/column.datainfo

@@ -0,0 +1,7 @@
+{
+  "type": "Json",
+  "keyLength": 1,
+  "data": {
+    "[\"10\"]": "MTA="
+  }
+}

package/export/tests/test_data/create_table_request_3/column.spec

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "name": "column",
+  "valueType": "Bytes",
+  "axesSpec": [
+    {
+      "name": "axis",
+      "type": "String"
+    }
+  ]
+}

package/export/tests/test_data/create_table_request_3/request.json

@@ -0,0 +1,8 @@
+{
+  "src": {
+    "type": "column",
+    "columnId": "column",
+    "qualifications": []
+  },
+  "filters": []
+}

package/export/tests/test_data/create_table_request_4/column.datainfo

@@ -0,0 +1,7 @@
+{
+  "type": "Json",
+  "keyLength": 1,
+  "data": {
+    "[\"10\"]": null
+  }
+}

package/export/tests/test_data/create_table_request_4/column.spec

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "name": "column",
+  "valueType": "Float",
+  "axesSpec": [
+    {
+      "name": "axis",
+      "type": "String"
+    }
+  ]
+}

package/export/tests/test_data/create_table_request_4/request.json

@@ -0,0 +1,8 @@
+{
+  "src": {
+    "type": "column",
+    "columnId": "column",
+    "qualifications": []
+  },
+  "filters": []
+}

package/export/tests/test_data/create_table_request_fail/column.datainfo

@@ -0,0 +1,5 @@
+{
+  "type": "JsonPartitioned",
+  "partitionKeyLength": 0,
+  "parts": { "[]": "column.jdata" }
+}

package/export/tests/test_data/create_table_request_fail/column.spec

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "name": "column",
+  "valueType": "Bytes",
+  "axesSpec": [
+    {
+      "name": "axis",
+      "type": "String"
+    }
+  ]
+}

package/export/tests/test_data/create_table_request_fail/request.json

@@ -0,0 +1,8 @@
+{
+  "src": {
+    "type": "column",
+    "columnId": "column",
+    "qualifications": []
+  },
+  "filters": []
+}

package/export/tests/test_data/delete_column_request/request.json

@@ -0,0 +1,27 @@
+{
+  "columns": [
+    {
+      "axesSpec": [
+        {
+          "type": "Int",
+          "name": "a1"
+        }
+      ],
+      "qualifications": []
+    },
+    {
+      "axesSpec": [
+        {
+          "type": "Int",
+          "name": "a1"
+        },
+        {
+          "type": "Int",
+          "name": "a2"
+        }
+      ],
+      "qualifications": []
+    }
+  ],
+  "delete": 1
+}

package/export/tests/test_data/delete_column_request/response.json

@@ -0,0 +1,13 @@
+{
+  "columns": [
+    {
+      "axesSpec": [
+        {
+          "type": "Int",
+          "name": "a1"
+        }
+      ],
+      "qualifications": []
+    }
+  ]
+}

package/export/tests/test_data/find_columns_request/column.spec

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "name": "column1",
+  "valueType": "Int",
+  "axesSpec": [
+    {
+      "type": "Int",
+      "name": "a1"
+    }
+  ]
+}

package/export/tests/test_data/find_columns_request/request.json

@@ -0,0 +1,5 @@
+{
+  "columnFilter": {},
+  "compatibleWith": [],
+  "strictlyCompatible": false
+}

package/export/tests/test_data/find_columns_request/response.json

@@ -0,0 +1,21 @@
+{
+  "hits": [
+    {
+      "hit": {
+        "columnId": "column1",
+        "spec": {
+          "kind": "PColumn",
+          "name": "column1",
+          "valueType": "Int",
+          "axesSpec": [
+            {
+              "type": "Int",
+              "name": "a1"
+            }
+          ]
+        }
+      },
+      "mappingVariants": []
+    }
+  ]
+}

package/export/tests/test_data/get_column_spec_request/column.spec

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "name": "column1",
+  "valueType": "Int",
+  "axesSpec": [
+    {
+      "type": "Int",
+      "name": "a1"
+    }
+  ]
+}

package/export/tests/test_data/get_column_spec_request/response.json

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "name": "column1",
+  "valueType": "Int",
+  "axesSpec": [
+    {
+      "type": "Int",
+      "name": "a1"
+    }
+  ]
+}

package/export/tests/test_data/set_column_data_request/column.datainfo

@@ -0,0 +1,5 @@
+{
+  "type": "JsonPartitioned",
+  "partitionKeyLength": 0,
+  "parts": { "[]": "column.jdata" }
+}

package/export/tests/test_data/set_column_data_request/column.jdata

@@ -0,0 +1,24 @@
+{
+  "[\"3WOKVWNSHQZM463FFF22KPLM\"]": "MISC1",
+  "[\"475RXKH7EUTMHXWNHKY5BDDI\"]": "MISC5",
+  "[\"6JWQLE5VUPM4QHKVN3KYHLKT\"]": "FebControl4",
+  "[\"6SOFGFV6ZQHYRB6SQMHZQZDR\"]": "FebControl12",
+  "[\"6VCYBXFRDOH5VZ6QY74GMIHA\"]": "MISC4",
+  "[\"7CS2NGNIEEQTOJGZDAHNER26\"]": "FebControl9",
+  "[\"7XRPQ7UZBSBHODVR3GGHNJ7P\"]": "FebControl6",
+  "[\"AXPQSWV5MJ3BREIYTNT7TQUX\"]": "MISC11",
+  "[\"FDFA4ZNPBIT5RIBEXZU2RXP3\"]": "FebControl2",
+  "[\"FKYEFEWFEZEZZLOTT45FWOEH\"]": "MISC6",
+  "[\"GVNK2PVS3Z3ZHZIPLG2CBKAO\"]": "FebControl8",
+  "[\"H66ONZUXPFR5WYQYEDB3LOXN\"]": "FebControl11",
+  "[\"HTQIFQ6RFG3RNT2A57Y5WZUL\"]": "FebControl3",
+  "[\"JBW3IZKAYBM6A3MDCOLWPIO7\"]": "FebControl10",
+  "[\"JQFOPV2EBY67YA6K2AAS3NAG\"]": "MISC2",
+  "[\"KPJ6NMVMC5IOJYTCF3R465JN\"]": "FebControl14",
+  "[\"KVPL75UNVHR5NYBRVUX35YBQ\"]": "MISC3",
+  "[\"LXQGHUMUIEOPZD2I3U5LPS5Y\"]": "FebControl1",
+  "[\"NOBHWRGGEZYMGF2GP7UOZICS\"]": "FebControl15",
+  "[\"XQXJLQU5XFX45SPRI6GX7XOP\"]": "MISC10",
+  "[\"YNF3R7ZIWRTNXHQWS53KEWC7\"]": "FebControl7",
+  "[\"ZN4DY2AJ2ZRFNBJ6B4TEOQAX\"]": "FebControl13"
+}

package/export/tests/test_data/set_column_data_request/column.spec

@@ -0,0 +1,14 @@
+{
+  "kind": "PColumn",
+  "name": "column",
+  "valueType": "String",
+  "axesSpec": [
+    {
+      "type": "String",
+      "name": "pl7.app/sampleId",
+      "domain": { "pl7.app/blockId": "00-SamplesAndData" },
+      "annotations": { "pl7.app/label": "Sample id" }
+    }
+  ],
+  "annotations": { "pl7.app/isLabel": "true", "pl7.app/label": "Sample label" }
+}

package/export/tests/test_data/sort_table_request/column1.datainfo

@@ -0,0 +1,5 @@
+{
+  "type": "JsonPartitioned",
+  "partitionKeyLength": 0,
+  "parts": { "[]": "column1.jdata" }
+}

package/export/tests/test_data/sort_table_request/column1.jdata

@@ -0,0 +1,4 @@
+{
+  "[1]": "IntOne",
+  "[2]": "IntTwo"
+}

package/export/tests/test_data/sort_table_request/column1.spec

@@ -0,0 +1,11 @@
+{
+  "kind": "PColumn",
+  "valueType": "String",
+  "name": "C1",
+  "axesSpec": [
+    {
+      "type": "Long",
+      "name": "A1"
+    }
+  ]
+}

package/export/tests/test_data/sort_table_request/column2.datainfo

@@ -0,0 +1,5 @@
+{
+  "type": "JsonPartitioned",
+  "partitionKeyLength": 0,
+  "parts": { "[]": "column2.jdata" }
+}

package/export/tests/test_data/sort_table_request/column2.jdata

@@ -0,0 +1,4 @@
+{
+  "[0,\"FloatOne\"]": 1.0,
+  "[0,\"FloatTwo\"]": 2.0
+}