@milaboratories/pf-driver 1.7.1 → 1.7.3

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Files changed (7) hide show
  1. package/dist/driver_impl.cjs +2 -3
  2. package/dist/driver_impl.cjs.map +1 -1
  3. package/dist/driver_impl.d.ts.map +1 -1
  4. package/dist/driver_impl.js +1 -2
  5. package/dist/driver_impl.js.map +1 -1
  6. package/package.json +6 -6
  7. package/src/driver_impl.ts +1 -1
package/dist/driver_impl.cjs CHANGED
@@ -210,11 +210,10 @@ var AbstractPFrameDriver = class {
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  for (const index of columnIndices) headers[index] = require_csv_writer.columnLabel(def.tableSpec[index]);
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  return await this.tableConcurrencyLimiter.run(async () => {
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  if (path.toLowerCase().endsWith(".xlsx")) {
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- const XLSX_MAX_ROWS_PER_SHEET = 1e6;
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  const shape = await pTable.getShape({ signal: combinedSignal });
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- if (shape.rows > XLSX_MAX_ROWS_PER_SHEET) {
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+ if (shape.rows > _milaboratories_pl_model_common.XLSX_MAX_ROWS_PER_SHEET) {
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  const error = new _milaboratories_pl_model_common.PFrameDriverError(`exportPTable failed`);
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- error.cause = /* @__PURE__ */ new Error(`xlsx export rejected: ${shape.rows} rows exceed the per-sheet limit of ${XLSX_MAX_ROWS_PER_SHEET} rows`);
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+ error.cause = /* @__PURE__ */ new Error(`xlsx export rejected: ${shape.rows} rows exceed the per-sheet limit of ${_milaboratories_pl_model_common.XLSX_MAX_ROWS_PER_SHEET} rows`);
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  throw error;
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  }
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  }
package/dist/driver_impl.cjs.map CHANGED
@@ -1 +1 @@
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- {"version":3,"file":"driver_impl.cjs","names":["PTableCachePerFrameOpsDefaults","PTableCachePlainOpsDefaults","PFrameFactory","ConcurrencyLimitingExecutor","PFramePool","PTableDefPool","PTablePool","PTableCachePerFrame","PTableCachePlain","ValueType","PoolEntryGuard","logPFrames","streamPTableRows","fs","Readable","zlib","columnLabel","PFrameDriverError","bigintReplacer"],"sources":["../src/driver_impl.ts"],"sourcesContent":["import {\n mapPObjectData,\n mapPTableDef,\n extractAllColumns,\n uniqueBy,\n canonicalizeJson,\n bigintReplacer,\n ValueType,\n type CalculateTableDataRequest,\n type CalculateTableDataResponse,\n type FindColumnsRequest,\n type FindColumnsResponse,\n type PColumnIdAndSpec,\n type PColumnSpec,\n type PFrameHandle,\n type PObjectId,\n type PTableColumnSpec,\n type PTableHandle,\n type PTableShape,\n type PTableVector,\n type TableRange,\n type UniqueValuesRequest,\n type UniqueValuesResponse,\n type PColumn,\n type PFrameDef,\n type PTableDef,\n type PTableRecordSingleValueFilterV2,\n type PTableRecordFilter,\n type JsonSerializable,\n type PTableDefV2,\n mapSpecQueryColumns,\n collectSpecQueryColumns,\n sortSpecQuery,\n sortPTableDef,\n resolveAnnotationParents,\n PFrameDriverError,\n} from \"@milaboratories/pl-model-common\";\nimport type { PFrameInternal } from \"@milaboratories/pl-model-middle-layer\";\nimport {\n ConcurrencyLimitingExecutor,\n createPathAtomically,\n type MiLogger,\n} from \"@milaboratories/ts-helpers\";\nimport { isNil, PoolEntryGuard, type PoolEntry } from \"@milaboratories/helpers\";\nimport { PFrameFactory } from \"@milaboratories/pframes-rs-node\";\nimport { expandAxes, findTableColumn, rewriteLegacyFilters } from \"@milaboratories/pframes-rs-wasm\";\nimport { tmpdir } from \"node:os\";\nimport * as fs from \"node:fs\";\nimport { Readable } from \"node:stream\";\nimport { pipeline } from \"node:stream/promises\";\nimport * as zlib from \"node:zlib\";\nimport { columnLabel, streamPTableRows } from \"./csv_writer\";\nimport type {\n AbstractInternalPFrameDriver,\n WritePTableToFsOptions,\n WritePTableToFsResult,\n ExportPTableOptions,\n} from \"./driver_decl\";\nimport { logPFrames } from \"./logging\";\nimport {\n PFramePool,\n type LocalBlobProvider as PoolLocalBlobProvider,\n type RemoteBlobProvider as PoolRemoteBlobProvider,\n} from \"./pframe_pool\";\nimport { PTableDefPool } from \"./ptable_def_pool\";\nimport { PTablePool } from \"./ptable_pool\";\nimport {\n PTableCachePerFrame,\n PTableCachePerFrameOpsDefaults,\n type PTableCachePerFrameOps,\n} from \"./ptable_cache_per_frame\";\nimport {\n PTableCachePlain,\n PTableCachePlainOpsDefaults,\n type PTableCachePlainOps,\n} from \"./ptable_cache_plain\";\n\nexport interface LocalBlobProvider<TreeEntry extends JsonSerializable>\n extends PoolLocalBlobProvider<TreeEntry>, AsyncDisposable {}\n\nexport interface RemoteBlobProvider<TreeEntry extends JsonSerializable>\n extends PoolRemoteBlobProvider<TreeEntry>, AsyncDisposable {}\n\nexport type AbstractPFrameDriverOps = PTableCachePerFrameOps &\n PTableCachePlainOps & {\n /** Concurrency limits for `getUniqueValues` and `calculateTableData` requests */\n pFrameConcurrency: number;\n /** Concurrency limits for `getShape` and `getData` requests */\n pTableConcurrency: number;\n };\n\nexport const AbstractPFrameDriverOpsDefaults: AbstractPFrameDriverOps = {\n ...PTableCachePerFrameOpsDefaults,\n ...PTableCachePlainOpsDefaults,\n pFrameConcurrency: 1, // 1 join is executed in parallel and utilize all RAM and CPU cores\n pTableConcurrency: 1, // 1 joined table is read from disk at a time, which matches 1 table the user can view in the UI\n};\n\nexport type DataInfoResolver<PColumnData, TreeEntry extends JsonSerializable> = (\n spec: PColumnSpec,\n data: PColumnData,\n) => PFrameInternal.DataInfo<TreeEntry>;\n\nexport class AbstractPFrameDriver<\n PColumnData,\n TreeEntry extends JsonSerializable,\n> implements AbstractInternalPFrameDriver<PColumnData> {\n private readonly logger: PFrameInternal.Logger;\n\n private readonly localBlobProvider: LocalBlobProvider<TreeEntry>;\n private readonly remoteBlobProvider: RemoteBlobProvider<TreeEntry>;\n\n private readonly resolveDataInfo: DataInfoResolver<PColumnData, TreeEntry>;\n\n private readonly pFrames: PFramePool<TreeEntry>;\n private readonly pTableDefs: PTableDefPool;\n private readonly pTables: PTablePool<TreeEntry>;\n\n private readonly pTableCachePerFrame: PTableCachePerFrame;\n private readonly pTableCachePlain: PTableCachePlain;\n\n private readonly frameConcurrencyLimiter: ConcurrencyLimitingExecutor;\n private readonly tableConcurrencyLimiter: ConcurrencyLimitingExecutor;\n\n public async pprofDump(): Promise<Uint8Array> {\n return await PFrameFactory.pprofDump();\n }\n\n public constructor({\n logger = () => {},\n localBlobProvider,\n remoteBlobProvider,\n spillPath = tmpdir(),\n options = AbstractPFrameDriverOpsDefaults,\n resolveDataInfo,\n }: {\n logger?: PFrameInternal.Logger;\n localBlobProvider: LocalBlobProvider<TreeEntry>;\n remoteBlobProvider: RemoteBlobProvider<TreeEntry>;\n spillPath?: string;\n options?: AbstractPFrameDriverOps;\n resolveDataInfo: DataInfoResolver<PColumnData, TreeEntry>;\n }) {\n this.logger = logger;\n\n this.localBlobProvider = localBlobProvider;\n this.remoteBlobProvider = remoteBlobProvider;\n\n this.resolveDataInfo = resolveDataInfo;\n\n this.frameConcurrencyLimiter = new ConcurrencyLimitingExecutor(options.pFrameConcurrency);\n this.tableConcurrencyLimiter = new ConcurrencyLimitingExecutor(options.pTableConcurrency);\n\n this.pFrames = new PFramePool(\n this.localBlobProvider,\n this.remoteBlobProvider,\n this.logger,\n spillPath,\n );\n this.pTableDefs = new PTableDefPool(this.logger);\n this.pTables = new PTablePool(this.pFrames, this.pTableDefs, this.logger);\n\n this.pTableCachePerFrame = new PTableCachePerFrame(this.logger, options);\n this.pTableCachePlain = new PTableCachePlain(this.logger, options);\n }\n\n async dispose(): Promise<void> {\n void (await Promise.allSettled([\n this.pTables[Symbol.asyncDispose](),\n this.pTableDefs[Symbol.asyncDispose](),\n this.pFrames[Symbol.asyncDispose](),\n this.localBlobProvider[Symbol.asyncDispose](),\n this.remoteBlobProvider[Symbol.asyncDispose](),\n ]));\n }\n\n async [Symbol.asyncDispose](): Promise<void> {\n return await this.dispose();\n }\n\n //\n // Internal / Config API Methods\n //\n\n public createPFrame(def: PFrameDef<PColumn<PColumnData>>): PoolEntry<PFrameHandle> {\n const ValueTypes = new Set(Object.values(ValueType));\n const supportedColumns = def\n .filter((column) => ValueTypes.has(column.spec.valueType))\n .map((c) => ({ ...c, spec: resolveAnnotationParents(c.spec) }));\n const uniqueColumns = uniqueBy(supportedColumns, (column) => column.id);\n const columns = uniqueColumns.map((c) =>\n mapPObjectData(c, (d) => this.resolveDataInfo(c.spec, d)),\n );\n\n return this.pFrames.acquire(columns);\n }\n\n public createPTable(rawDef: PTableDef<PColumn<PColumnData>>): PoolEntry<PTableHandle> {\n const columns = uniqueBy(extractAllColumns(rawDef.src), (c) => c.id);\n using pFrameGuard = new PoolEntryGuard(this.createPFrame(columns));\n const sortedDef = sortPTableDef(\n migrateTableFilter(\n mapPTableDef(rawDef, (c) => c.id),\n this.logger,\n ),\n );\n const pFrameSpec = this.pFrames.getByKey(pFrameGuard.key).pFrameSpec;\n using pTableGuard = new PoolEntryGuard(\n this.pTableDefs.acquireFromLegacy({\n pFrameHandle: pFrameGuard.key,\n def: sortedDef,\n pFrameSpec,\n }).entry,\n );\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Create PTable call (pFrameHandle = ${pFrameGuard.key}; pTableHandle = ${pTableGuard.key})`,\n );\n }\n\n const pFrameEntry = pFrameGuard.keep();\n const pTableEntry = pTableGuard.keep();\n const unref = () => {\n pTableEntry.unref();\n pFrameEntry.unref();\n };\n return {\n key: pTableEntry.key,\n resource: pTableEntry.resource,\n unref,\n [Symbol.dispose]: unref,\n };\n }\n\n public createPTableV2(def: PTableDefV2<PColumn<PColumnData>>): PoolEntry<PTableHandle> {\n const columns = uniqueBy(collectSpecQueryColumns(def.query), (c) => c.id);\n using pFrameGuard = new PoolEntryGuard(this.createPFrame(columns));\n const pFrameSpec = this.pFrames.getByKey(pFrameGuard.key).pFrameSpec;\n const sortedQuery = sortSpecQuery(mapSpecQueryColumns(def.query, (c) => c.id));\n const { tableSpec, dataQuery } = pFrameSpec.evaluateQuery(sortedQuery);\n\n using pTableGuard = new PoolEntryGuard(\n this.pTableDefs.acquire({\n pFrameHandle: pFrameGuard.key,\n tableSpec,\n dataQuery,\n }),\n );\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Create PTable call (pFrameHandle = ${pFrameGuard.key}; pTableHandle = ${pTableGuard.key})`,\n );\n }\n\n const pFrameEntry = pFrameGuard.keep();\n const pTableEntry = pTableGuard.keep();\n const unref = () => {\n pTableEntry.unref();\n pFrameEntry.unref();\n };\n return {\n key: pTableEntry.key,\n resource: pTableEntry.resource,\n unref,\n [Symbol.dispose]: unref,\n };\n }\n\n public async writePTableToFs(\n handle: PTableHandle,\n options: WritePTableToFsOptions,\n ): Promise<WritePTableToFsResult> {\n this.logger(\n \"info\",\n `[WritePTableToFs] ENTER (handle = ${handle}, path = ${options.path}, format = ${options.format}, compression = ${options.compression ?? \"auto\"}, columns = ${options.columnIndices.length})`,\n );\n const startTime = performance.now();\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any(\n [options.signal, disposeSignal].filter((s): s is AbortSignal => !isNil(s)),\n );\n\n return await this.tableConcurrencyLimiter.run(async () => {\n const shape = await pTable.getShape({ signal: combinedSignal });\n const clippedRange = clipRange(options.range, shape);\n const specs = def.tableSpec;\n const separator = options.format === \"tsv\" ? \"\\t\" : \",\";\n\n const iterable = streamPTableRows({\n pTable,\n specs,\n columnIndices: options.columnIndices,\n range: clippedRange,\n chunkSize: options.chunkSize ?? 50_000,\n separator,\n includeHeader: options.includeHeader ?? true,\n bom: options.bom ?? true,\n signal: combinedSignal,\n });\n\n const miLogger: MiLogger = {\n info: (msg) => this.logger(\"info\", String(msg)),\n warn: (msg) => this.logger(\"warn\", String(msg)),\n error: (msg) => this.logger(\"error\", String(msg)),\n };\n\n let bytesWritten = 0;\n await createPathAtomically(miLogger, options.path, async (tempPath) => {\n const writeStream = fs.createWriteStream(tempPath, { flags: \"wx\" });\n const source = Readable.from(iterable, { objectMode: false });\n if (options.compression?.type === \"gzip\") {\n const gzip = zlib.createGzip({ level: options.compression.level ?? 6 });\n await pipeline(source, gzip, writeStream, { signal: combinedSignal });\n } else {\n await pipeline(source, writeStream, { signal: combinedSignal });\n }\n bytesWritten = writeStream.bytesWritten;\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n\n // rowsWritten equals the clipped range length — the generator streams the\n // entire effective range without early termination, so this is accurate.\n const rowsWritten = clippedRange.length;\n\n if (logPFrames()) {\n const durationMs = Math.round(performance.now() - startTime);\n this.logger(\n \"info\",\n `[WritePTableToFs] complete (handle = ${handle}, columns = ${options.columnIndices.length}, rows = ${rowsWritten}, bytes = ${bytesWritten}, duration = ${durationMs}ms)`,\n );\n }\n\n return { path: options.path, rowsWritten, bytesWritten };\n });\n }\n\n public async exportPTable(\n handle: PTableHandle,\n options: ExportPTableOptions,\n signal?: AbortSignal,\n ): Promise<void> {\n const { path, columnIndices } = options;\n\n this.logger(\"info\", `[ExportPTable] ENTER (handle = ${handle}, path = ${path})`);\n const startTime = performance.now();\n\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any(\n [signal, disposeSignal].filter((s): s is AbortSignal => !isNil(s)),\n );\n\n const headers: Record<number, string> = {};\n for (const index of columnIndices) {\n headers[index] = columnLabel(def.tableSpec[index]);\n }\n\n return await this.tableConcurrencyLimiter.run(async () => {\n // Cap data rows per xlsx sheet below Excel's hard limit of 1,048,576.\n if (path.toLowerCase().endsWith(\".xlsx\")) {\n const XLSX_MAX_ROWS_PER_SHEET = 1_000_000;\n const shape = await pTable.getShape({ signal: combinedSignal });\n if (shape.rows > XLSX_MAX_ROWS_PER_SHEET) {\n const error = new PFrameDriverError(`exportPTable failed`);\n error.cause = new Error(\n `xlsx export rejected: ${shape.rows} rows exceed the per-sheet ` +\n `limit of ${XLSX_MAX_ROWS_PER_SHEET} rows`,\n );\n throw error;\n }\n }\n\n await pTable.export(path, headers, { signal: combinedSignal });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n\n if (logPFrames()) {\n const durationMs = Math.round(performance.now() - startTime);\n this.logger(\n \"info\",\n `[ExportPTable] complete (handle = ${handle}, path = ${path}), ` +\n `duration = ${durationMs}ms`,\n );\n }\n });\n }\n\n //\n // PFrame instance methods\n //\n\n public async findColumns(\n handle: PFrameHandle,\n request: FindColumnsRequest,\n ): Promise<FindColumnsResponse> {\n const iRequest: PFrameInternal.FindColumnsRequest = {\n ...request,\n compatibleWith:\n request.compatibleWith.length !== 0\n ? [\n {\n axesSpec: [\n ...new Map(\n request.compatibleWith.map((item) => [canonicalizeJson(item), item] as const),\n ).values(),\n ],\n qualifications: [],\n },\n ]\n : [],\n };\n\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const response = pFrameSpec.findColumns(iRequest);\n return {\n hits: response.hits\n .filter(\n (h) =>\n // only exactly matching columns\n h.mappingVariants.length === 0 ||\n h.mappingVariants.some(\n (v) =>\n v.qualifications.forHit.length === 0 &&\n v.qualifications.forQueries.every((q) => q.length === 0),\n ),\n )\n .map((h) => h.hit),\n };\n }\n\n public async getColumnSpec(\n handle: PFrameHandle,\n columnId: PObjectId,\n ): Promise<PColumnSpec | null> {\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const info = pFrameSpec.listColumns().find((c) => c.columnId === columnId);\n return info?.spec ?? null;\n }\n\n public async listColumns(handle: PFrameHandle): Promise<PColumnIdAndSpec[]> {\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n return pFrameSpec.listColumns().map(({ columnId, spec }) => ({ columnId, spec }));\n }\n\n public async calculateTableData(\n handle: PFrameHandle,\n request: CalculateTableDataRequest<PObjectId>,\n range: TableRange | undefined,\n signal?: AbortSignal,\n ): Promise<CalculateTableDataResponse> {\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Call calculateTableData, handle = ${handle}, request = ${JSON.stringify(request, bigintReplacer)}`,\n );\n }\n\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const sortedDef = sortPTableDef(migrateTableFilter(request, this.logger));\n const { def, entry } = this.pTables.acquireFromLegacy({\n pFrameHandle: handle,\n def: sortedDef,\n pFrameSpec,\n });\n using tableGuard = new PoolEntryGuard(entry);\n const tableSpec = def.tableSpec;\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n return await this.frameConcurrencyLimiter.run(async () => {\n // TODO: throw error when more then 150k rows is requested\n // after pf-plots migration to stream API\n\n const data = await pTable.getData([...tableSpec.keys()], {\n range,\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePerFrame.cache(tableGuard.keep(), overallSize);\n\n return tableSpec.map((spec, i) => ({\n spec: spec,\n data: data[i],\n }));\n });\n }\n\n public async getUniqueValues(\n handle: PFrameHandle,\n request: UniqueValuesRequest,\n signal?: AbortSignal,\n ): Promise<UniqueValuesResponse> {\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Call getUniqueValues, handle = ${handle}, request = ${JSON.stringify(request, bigintReplacer)}`,\n );\n }\n\n const { pFrameDataPromise, pFrameSpec, disposeSignal } = this.pFrames.getByKey(handle);\n const pFrameData = await pFrameDataPromise;\n\n const column = pFrameSpec.listColumns().find((c) => c.columnId === request.columnId);\n if (!column) {\n const error = new PFrameDriverError(`getUniqueValues failed`);\n error.cause = new Error(`column ${request.columnId} is not registered in the PFrame`);\n throw error;\n }\n\n const axisIds = expandAxes(column.spec.axesSpec);\n const tableSpec: PTableColumnSpec[] = [\n ...column.spec.axesSpec.map(\n (axisSpec, i): PTableColumnSpec => ({\n type: \"axis\",\n id: axisIds[i],\n spec: axisSpec,\n }),\n ),\n { type: \"column\", id: request.columnId, spec: column.spec },\n ];\n\n let axisIndex: number | undefined;\n if (request.axis !== undefined) {\n const index = findTableColumn(tableSpec, { type: \"axis\", id: request.axis });\n if (index < 0) {\n const error = new PFrameDriverError(`getUniqueValues failed`);\n error.cause = new Error(\n `axis ${JSON.stringify(request.axis)} not found among axes of column ${request.columnId}`,\n );\n throw error;\n }\n axisIndex = index;\n }\n\n const resolvedRequest: PFrameInternal.UniqueValuesRequestV2 = {\n columnId: request.columnId,\n axisIndex,\n filters: rewriteLegacyFilters({\n tableSpec,\n filters: migrateFilters(request.filters, this.logger),\n }),\n limit: request.limit,\n };\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n return await this.frameConcurrencyLimiter.run(async () => {\n return await pFrameData.getUniqueValues(resolvedRequest, { signal: combinedSignal });\n });\n }\n\n //\n // PTable instance methods\n //\n\n public async getSpec(handle: PTableHandle): Promise<PTableColumnSpec[]> {\n const { def } = this.pTableDefs.getByKey(handle);\n return def.tableSpec;\n }\n\n public async getShape(handle: PTableHandle, signal?: AbortSignal): Promise<PTableShape> {\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n const { shape, overallSize } = await this.tableConcurrencyLimiter.run(async () => {\n const shape = await pTable.getShape({\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n\n return { shape, overallSize };\n });\n\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n return shape;\n }\n\n public async getData(\n handle: PTableHandle,\n columnIndices: number[],\n range: TableRange | undefined,\n signal?: AbortSignal,\n ): Promise<PTableVector[]> {\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n const { data, overallSize } = await this.tableConcurrencyLimiter.run(async () => {\n const data = await pTable.getData(columnIndices, {\n range,\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n\n return { data, overallSize };\n });\n\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n return data;\n }\n}\n\n/** Clamp range to table shape. When range is undefined, returns full table range. */\nfunction clipRange(range: undefined | TableRange, shape: PTableShape): TableRange {\n if (isNil(range)) {\n return { offset: 0, length: shape.rows };\n }\n const clampedOffset = Math.min(range.offset, shape.rows);\n const clampedLength = Math.min(range.length, shape.rows - clampedOffset);\n return { offset: clampedOffset, length: clampedLength };\n}\n\nfunction migrateFilters(\n filters: PTableRecordFilter[],\n logger: PFrameInternal.Logger,\n): PTableRecordFilter[] {\n const filtersV1 = [];\n const filtersV2: PTableRecordSingleValueFilterV2[] = [];\n for (const filter of filters) {\n if ((filter.type as unknown) === \"bySingleColumn\") {\n filtersV1.push(filter);\n filtersV2.push({\n ...filter,\n type: \"bySingleColumnV2\",\n });\n } else {\n filtersV2.push(filter);\n }\n }\n if (filtersV1.length > 0) {\n const filtersV1Json = JSON.stringify(filtersV1);\n logger(\n \"warn\",\n `type overwritten from 'bySingleColumn' to 'bySingleColumnV2' for filters: ${filtersV1Json}`,\n );\n }\n return filtersV2;\n}\n\nfunction migrateTableFilter<T>(\n def: Omit<PTableDef<T>, \"partitionFilters\"> | PTableDef<T>,\n logger: PFrameInternal.Logger,\n): PTableDef<T> {\n if (!(\"partitionFilters\" in def)) {\n // For old blocks assume all axes filters to be partition filters\n return {\n ...def,\n partitionFilters: migrateFilters(\n def.filters.filter((f) => f.column.type === \"axis\"),\n logger,\n ),\n filters: migrateFilters(\n def.filters.filter((f) => f.column.type === \"column\"),\n logger,\n ),\n };\n }\n return {\n ...def,\n partitionFilters: migrateFilters(def.partitionFilters, logger),\n filters: migrateFilters(def.filters, logger),\n 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1
+ {"version":3,"file":"driver_impl.cjs","names":["PTableCachePerFrameOpsDefaults","PTableCachePlainOpsDefaults","PFrameFactory","ConcurrencyLimitingExecutor","PFramePool","PTableDefPool","PTablePool","PTableCachePerFrame","PTableCachePlain","ValueType","PoolEntryGuard","logPFrames","streamPTableRows","fs","Readable","zlib","columnLabel","XLSX_MAX_ROWS_PER_SHEET","PFrameDriverError","bigintReplacer"],"sources":["../src/driver_impl.ts"],"sourcesContent":["import {\n mapPObjectData,\n mapPTableDef,\n extractAllColumns,\n uniqueBy,\n canonicalizeJson,\n bigintReplacer,\n ValueType,\n type CalculateTableDataRequest,\n type CalculateTableDataResponse,\n type FindColumnsRequest,\n type FindColumnsResponse,\n type PColumnIdAndSpec,\n type PColumnSpec,\n type PFrameHandle,\n type PObjectId,\n type PTableColumnSpec,\n type PTableHandle,\n type PTableShape,\n type PTableVector,\n type TableRange,\n type UniqueValuesRequest,\n type UniqueValuesResponse,\n type PColumn,\n type PFrameDef,\n type PTableDef,\n type PTableRecordSingleValueFilterV2,\n type PTableRecordFilter,\n type JsonSerializable,\n type PTableDefV2,\n mapSpecQueryColumns,\n collectSpecQueryColumns,\n sortSpecQuery,\n sortPTableDef,\n resolveAnnotationParents,\n PFrameDriverError,\n XLSX_MAX_ROWS_PER_SHEET,\n} from \"@milaboratories/pl-model-common\";\nimport type { PFrameInternal } from \"@milaboratories/pl-model-middle-layer\";\nimport {\n ConcurrencyLimitingExecutor,\n createPathAtomically,\n type MiLogger,\n} from \"@milaboratories/ts-helpers\";\nimport { isNil, PoolEntryGuard, type PoolEntry } from \"@milaboratories/helpers\";\nimport { PFrameFactory } from \"@milaboratories/pframes-rs-node\";\nimport { expandAxes, findTableColumn, rewriteLegacyFilters } from \"@milaboratories/pframes-rs-wasm\";\nimport { tmpdir } from \"node:os\";\nimport * as fs from \"node:fs\";\nimport { Readable } from \"node:stream\";\nimport { pipeline } from \"node:stream/promises\";\nimport * as zlib from \"node:zlib\";\nimport { columnLabel, streamPTableRows } from \"./csv_writer\";\nimport type {\n AbstractInternalPFrameDriver,\n WritePTableToFsOptions,\n WritePTableToFsResult,\n ExportPTableOptions,\n} from \"./driver_decl\";\nimport { logPFrames } from \"./logging\";\nimport {\n PFramePool,\n type LocalBlobProvider as PoolLocalBlobProvider,\n type RemoteBlobProvider as PoolRemoteBlobProvider,\n} from \"./pframe_pool\";\nimport { PTableDefPool } from \"./ptable_def_pool\";\nimport { PTablePool } from \"./ptable_pool\";\nimport {\n PTableCachePerFrame,\n PTableCachePerFrameOpsDefaults,\n type PTableCachePerFrameOps,\n} from \"./ptable_cache_per_frame\";\nimport {\n PTableCachePlain,\n PTableCachePlainOpsDefaults,\n type PTableCachePlainOps,\n} from \"./ptable_cache_plain\";\n\nexport interface LocalBlobProvider<TreeEntry extends JsonSerializable>\n extends PoolLocalBlobProvider<TreeEntry>, AsyncDisposable {}\n\nexport interface RemoteBlobProvider<TreeEntry extends JsonSerializable>\n extends PoolRemoteBlobProvider<TreeEntry>, AsyncDisposable {}\n\nexport type AbstractPFrameDriverOps = PTableCachePerFrameOps &\n PTableCachePlainOps & {\n /** Concurrency limits for `getUniqueValues` and `calculateTableData` requests */\n pFrameConcurrency: number;\n /** Concurrency limits for `getShape` and `getData` requests */\n pTableConcurrency: number;\n };\n\nexport const AbstractPFrameDriverOpsDefaults: AbstractPFrameDriverOps = {\n ...PTableCachePerFrameOpsDefaults,\n ...PTableCachePlainOpsDefaults,\n pFrameConcurrency: 1, // 1 join is executed in parallel and utilize all RAM and CPU cores\n pTableConcurrency: 1, // 1 joined table is read from disk at a time, which matches 1 table the user can view in the UI\n};\n\nexport type DataInfoResolver<PColumnData, TreeEntry extends JsonSerializable> = (\n spec: PColumnSpec,\n data: PColumnData,\n) => PFrameInternal.DataInfo<TreeEntry>;\n\nexport class AbstractPFrameDriver<\n PColumnData,\n TreeEntry extends JsonSerializable,\n> implements AbstractInternalPFrameDriver<PColumnData> {\n private readonly logger: PFrameInternal.Logger;\n\n private readonly localBlobProvider: LocalBlobProvider<TreeEntry>;\n private readonly remoteBlobProvider: RemoteBlobProvider<TreeEntry>;\n\n private readonly resolveDataInfo: DataInfoResolver<PColumnData, TreeEntry>;\n\n private readonly pFrames: PFramePool<TreeEntry>;\n private readonly pTableDefs: PTableDefPool;\n private readonly pTables: PTablePool<TreeEntry>;\n\n private readonly pTableCachePerFrame: PTableCachePerFrame;\n private readonly pTableCachePlain: PTableCachePlain;\n\n private readonly frameConcurrencyLimiter: ConcurrencyLimitingExecutor;\n private readonly tableConcurrencyLimiter: ConcurrencyLimitingExecutor;\n\n public async pprofDump(): Promise<Uint8Array> {\n return await PFrameFactory.pprofDump();\n }\n\n public constructor({\n logger = () => {},\n localBlobProvider,\n remoteBlobProvider,\n spillPath = tmpdir(),\n options = AbstractPFrameDriverOpsDefaults,\n resolveDataInfo,\n }: {\n logger?: PFrameInternal.Logger;\n localBlobProvider: LocalBlobProvider<TreeEntry>;\n remoteBlobProvider: RemoteBlobProvider<TreeEntry>;\n spillPath?: string;\n options?: AbstractPFrameDriverOps;\n resolveDataInfo: DataInfoResolver<PColumnData, TreeEntry>;\n }) {\n this.logger = logger;\n\n this.localBlobProvider = localBlobProvider;\n this.remoteBlobProvider = remoteBlobProvider;\n\n this.resolveDataInfo = resolveDataInfo;\n\n this.frameConcurrencyLimiter = new ConcurrencyLimitingExecutor(options.pFrameConcurrency);\n this.tableConcurrencyLimiter = new ConcurrencyLimitingExecutor(options.pTableConcurrency);\n\n this.pFrames = new PFramePool(\n this.localBlobProvider,\n this.remoteBlobProvider,\n this.logger,\n spillPath,\n );\n this.pTableDefs = new PTableDefPool(this.logger);\n this.pTables = new PTablePool(this.pFrames, this.pTableDefs, this.logger);\n\n this.pTableCachePerFrame = new PTableCachePerFrame(this.logger, options);\n this.pTableCachePlain = new PTableCachePlain(this.logger, options);\n }\n\n async dispose(): Promise<void> {\n void (await Promise.allSettled([\n this.pTables[Symbol.asyncDispose](),\n this.pTableDefs[Symbol.asyncDispose](),\n this.pFrames[Symbol.asyncDispose](),\n this.localBlobProvider[Symbol.asyncDispose](),\n this.remoteBlobProvider[Symbol.asyncDispose](),\n ]));\n }\n\n async [Symbol.asyncDispose](): Promise<void> {\n return await this.dispose();\n }\n\n //\n // Internal / Config API Methods\n //\n\n public createPFrame(def: PFrameDef<PColumn<PColumnData>>): PoolEntry<PFrameHandle> {\n const ValueTypes = new Set(Object.values(ValueType));\n const supportedColumns = def\n .filter((column) => ValueTypes.has(column.spec.valueType))\n .map((c) => ({ ...c, spec: resolveAnnotationParents(c.spec) }));\n const uniqueColumns = uniqueBy(supportedColumns, (column) => column.id);\n const columns = uniqueColumns.map((c) =>\n mapPObjectData(c, (d) => this.resolveDataInfo(c.spec, d)),\n );\n\n return this.pFrames.acquire(columns);\n }\n\n public createPTable(rawDef: PTableDef<PColumn<PColumnData>>): PoolEntry<PTableHandle> {\n const columns = uniqueBy(extractAllColumns(rawDef.src), (c) => c.id);\n using pFrameGuard = new PoolEntryGuard(this.createPFrame(columns));\n const sortedDef = sortPTableDef(\n migrateTableFilter(\n mapPTableDef(rawDef, (c) => c.id),\n this.logger,\n ),\n );\n const pFrameSpec = this.pFrames.getByKey(pFrameGuard.key).pFrameSpec;\n using pTableGuard = new PoolEntryGuard(\n this.pTableDefs.acquireFromLegacy({\n pFrameHandle: pFrameGuard.key,\n def: sortedDef,\n pFrameSpec,\n }).entry,\n );\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Create PTable call (pFrameHandle = ${pFrameGuard.key}; pTableHandle = ${pTableGuard.key})`,\n );\n }\n\n const pFrameEntry = pFrameGuard.keep();\n const pTableEntry = pTableGuard.keep();\n const unref = () => {\n pTableEntry.unref();\n pFrameEntry.unref();\n };\n return {\n key: pTableEntry.key,\n resource: pTableEntry.resource,\n unref,\n [Symbol.dispose]: unref,\n };\n }\n\n public createPTableV2(def: PTableDefV2<PColumn<PColumnData>>): PoolEntry<PTableHandle> {\n const columns = uniqueBy(collectSpecQueryColumns(def.query), (c) => c.id);\n using pFrameGuard = new PoolEntryGuard(this.createPFrame(columns));\n const pFrameSpec = this.pFrames.getByKey(pFrameGuard.key).pFrameSpec;\n const sortedQuery = sortSpecQuery(mapSpecQueryColumns(def.query, (c) => c.id));\n const { tableSpec, dataQuery } = pFrameSpec.evaluateQuery(sortedQuery);\n\n using pTableGuard = new PoolEntryGuard(\n this.pTableDefs.acquire({\n pFrameHandle: pFrameGuard.key,\n tableSpec,\n dataQuery,\n }),\n );\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Create PTable call (pFrameHandle = ${pFrameGuard.key}; pTableHandle = ${pTableGuard.key})`,\n );\n }\n\n const pFrameEntry = pFrameGuard.keep();\n const pTableEntry = pTableGuard.keep();\n const unref = () => {\n pTableEntry.unref();\n pFrameEntry.unref();\n };\n return {\n key: pTableEntry.key,\n resource: pTableEntry.resource,\n unref,\n [Symbol.dispose]: unref,\n };\n }\n\n public async writePTableToFs(\n handle: PTableHandle,\n options: WritePTableToFsOptions,\n ): Promise<WritePTableToFsResult> {\n this.logger(\n \"info\",\n `[WritePTableToFs] ENTER (handle = ${handle}, path = ${options.path}, format = ${options.format}, compression = ${options.compression ?? \"auto\"}, columns = ${options.columnIndices.length})`,\n );\n const startTime = performance.now();\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any(\n [options.signal, disposeSignal].filter((s): s is AbortSignal => !isNil(s)),\n );\n\n return await this.tableConcurrencyLimiter.run(async () => {\n const shape = await pTable.getShape({ signal: combinedSignal });\n const clippedRange = clipRange(options.range, shape);\n const specs = def.tableSpec;\n const separator = options.format === \"tsv\" ? \"\\t\" : \",\";\n\n const iterable = streamPTableRows({\n pTable,\n specs,\n columnIndices: options.columnIndices,\n range: clippedRange,\n chunkSize: options.chunkSize ?? 50_000,\n separator,\n includeHeader: options.includeHeader ?? true,\n bom: options.bom ?? true,\n signal: combinedSignal,\n });\n\n const miLogger: MiLogger = {\n info: (msg) => this.logger(\"info\", String(msg)),\n warn: (msg) => this.logger(\"warn\", String(msg)),\n error: (msg) => this.logger(\"error\", String(msg)),\n };\n\n let bytesWritten = 0;\n await createPathAtomically(miLogger, options.path, async (tempPath) => {\n const writeStream = fs.createWriteStream(tempPath, { flags: \"wx\" });\n const source = Readable.from(iterable, { objectMode: false });\n if (options.compression?.type === \"gzip\") {\n const gzip = zlib.createGzip({ level: options.compression.level ?? 6 });\n await pipeline(source, gzip, writeStream, { signal: combinedSignal });\n } else {\n await pipeline(source, writeStream, { signal: combinedSignal });\n }\n bytesWritten = writeStream.bytesWritten;\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n\n // rowsWritten equals the clipped range length — the generator streams the\n // entire effective range without early termination, so this is accurate.\n const rowsWritten = clippedRange.length;\n\n if (logPFrames()) {\n const durationMs = Math.round(performance.now() - startTime);\n this.logger(\n \"info\",\n `[WritePTableToFs] complete (handle = ${handle}, columns = ${options.columnIndices.length}, rows = ${rowsWritten}, bytes = ${bytesWritten}, duration = ${durationMs}ms)`,\n );\n }\n\n return { path: options.path, rowsWritten, bytesWritten };\n });\n }\n\n public async exportPTable(\n handle: PTableHandle,\n options: ExportPTableOptions,\n signal?: AbortSignal,\n ): Promise<void> {\n const { path, columnIndices } = options;\n\n this.logger(\"info\", `[ExportPTable] ENTER (handle = ${handle}, path = ${path})`);\n const startTime = performance.now();\n\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any(\n [signal, disposeSignal].filter((s): s is AbortSignal => !isNil(s)),\n );\n\n const headers: Record<number, string> = {};\n for (const index of columnIndices) {\n headers[index] = columnLabel(def.tableSpec[index]);\n }\n\n return await this.tableConcurrencyLimiter.run(async () => {\n // Cap data rows per xlsx sheet below Excel's hard limit of 1,048,576.\n if (path.toLowerCase().endsWith(\".xlsx\")) {\n const shape = await pTable.getShape({ signal: combinedSignal });\n if (shape.rows > XLSX_MAX_ROWS_PER_SHEET) {\n const error = new PFrameDriverError(`exportPTable failed`);\n error.cause = new Error(\n `xlsx export rejected: ${shape.rows} rows exceed the per-sheet ` +\n `limit of ${XLSX_MAX_ROWS_PER_SHEET} rows`,\n );\n throw error;\n }\n }\n\n await pTable.export(path, headers, { signal: combinedSignal });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n\n if (logPFrames()) {\n const durationMs = Math.round(performance.now() - startTime);\n this.logger(\n \"info\",\n `[ExportPTable] complete (handle = ${handle}, path = ${path}), ` +\n `duration = ${durationMs}ms`,\n );\n }\n });\n }\n\n //\n // PFrame instance methods\n //\n\n public async findColumns(\n handle: PFrameHandle,\n request: FindColumnsRequest,\n ): Promise<FindColumnsResponse> {\n const iRequest: PFrameInternal.FindColumnsRequest = {\n ...request,\n compatibleWith:\n request.compatibleWith.length !== 0\n ? [\n {\n axesSpec: [\n ...new Map(\n request.compatibleWith.map((item) => [canonicalizeJson(item), item] as const),\n ).values(),\n ],\n qualifications: [],\n },\n ]\n : [],\n };\n\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const response = pFrameSpec.findColumns(iRequest);\n return {\n hits: response.hits\n .filter(\n (h) =>\n // only exactly matching columns\n h.mappingVariants.length === 0 ||\n h.mappingVariants.some(\n (v) =>\n v.qualifications.forHit.length === 0 &&\n v.qualifications.forQueries.every((q) => q.length === 0),\n ),\n )\n .map((h) => h.hit),\n };\n }\n\n public async getColumnSpec(\n handle: PFrameHandle,\n columnId: PObjectId,\n ): Promise<PColumnSpec | null> {\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const info = pFrameSpec.listColumns().find((c) => c.columnId === columnId);\n return info?.spec ?? null;\n }\n\n public async listColumns(handle: PFrameHandle): Promise<PColumnIdAndSpec[]> {\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n return pFrameSpec.listColumns().map(({ columnId, spec }) => ({ columnId, spec }));\n }\n\n public async calculateTableData(\n handle: PFrameHandle,\n request: CalculateTableDataRequest<PObjectId>,\n range: TableRange | undefined,\n signal?: AbortSignal,\n ): Promise<CalculateTableDataResponse> {\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Call calculateTableData, handle = ${handle}, request = ${JSON.stringify(request, bigintReplacer)}`,\n );\n }\n\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const sortedDef = sortPTableDef(migrateTableFilter(request, this.logger));\n const { def, entry } = this.pTables.acquireFromLegacy({\n pFrameHandle: handle,\n def: sortedDef,\n pFrameSpec,\n });\n using tableGuard = new PoolEntryGuard(entry);\n const tableSpec = def.tableSpec;\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n return await this.frameConcurrencyLimiter.run(async () => {\n // TODO: throw error when more then 150k rows is requested\n // after pf-plots migration to stream API\n\n const data = await pTable.getData([...tableSpec.keys()], {\n range,\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePerFrame.cache(tableGuard.keep(), overallSize);\n\n return tableSpec.map((spec, i) => ({\n spec: spec,\n data: data[i],\n }));\n });\n }\n\n public async getUniqueValues(\n handle: PFrameHandle,\n request: UniqueValuesRequest,\n signal?: AbortSignal,\n ): Promise<UniqueValuesResponse> {\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Call getUniqueValues, handle = ${handle}, request = ${JSON.stringify(request, bigintReplacer)}`,\n );\n }\n\n const { pFrameDataPromise, pFrameSpec, disposeSignal } = this.pFrames.getByKey(handle);\n const pFrameData = await pFrameDataPromise;\n\n const column = pFrameSpec.listColumns().find((c) => c.columnId === request.columnId);\n if (!column) {\n const error = new PFrameDriverError(`getUniqueValues failed`);\n error.cause = new Error(`column ${request.columnId} is not registered in the PFrame`);\n throw error;\n }\n\n const axisIds = expandAxes(column.spec.axesSpec);\n const tableSpec: PTableColumnSpec[] = [\n ...column.spec.axesSpec.map(\n (axisSpec, i): PTableColumnSpec => ({\n type: \"axis\",\n id: axisIds[i],\n spec: axisSpec,\n }),\n ),\n { type: \"column\", id: request.columnId, spec: column.spec },\n ];\n\n let axisIndex: number | undefined;\n if (request.axis !== undefined) {\n const index = findTableColumn(tableSpec, { type: \"axis\", id: request.axis });\n if (index < 0) {\n const error = new PFrameDriverError(`getUniqueValues failed`);\n error.cause = new Error(\n `axis ${JSON.stringify(request.axis)} not found among axes of column ${request.columnId}`,\n );\n throw error;\n }\n axisIndex = index;\n }\n\n const resolvedRequest: PFrameInternal.UniqueValuesRequestV2 = {\n columnId: request.columnId,\n axisIndex,\n filters: rewriteLegacyFilters({\n tableSpec,\n filters: migrateFilters(request.filters, this.logger),\n }),\n limit: request.limit,\n };\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n return await this.frameConcurrencyLimiter.run(async () => {\n return await pFrameData.getUniqueValues(resolvedRequest, { signal: combinedSignal });\n });\n }\n\n //\n // PTable instance methods\n //\n\n public async getSpec(handle: PTableHandle): Promise<PTableColumnSpec[]> {\n const { def } = this.pTableDefs.getByKey(handle);\n return def.tableSpec;\n }\n\n public async getShape(handle: PTableHandle, signal?: AbortSignal): Promise<PTableShape> {\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n const { shape, overallSize } = await this.tableConcurrencyLimiter.run(async () => {\n const shape = await pTable.getShape({\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n\n return { shape, overallSize };\n });\n\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n return shape;\n }\n\n public async getData(\n handle: PTableHandle,\n columnIndices: number[],\n range: TableRange | undefined,\n signal?: AbortSignal,\n ): Promise<PTableVector[]> {\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n const { data, overallSize } = await this.tableConcurrencyLimiter.run(async () => {\n const data = await pTable.getData(columnIndices, {\n range,\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n\n return { data, overallSize };\n });\n\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n return data;\n }\n}\n\n/** Clamp range to table shape. When range is undefined, returns full table range. */\nfunction clipRange(range: undefined | TableRange, shape: PTableShape): TableRange {\n if (isNil(range)) {\n return { offset: 0, length: shape.rows };\n }\n const clampedOffset = Math.min(range.offset, shape.rows);\n const clampedLength = Math.min(range.length, shape.rows - clampedOffset);\n return { offset: clampedOffset, length: clampedLength };\n}\n\nfunction migrateFilters(\n filters: PTableRecordFilter[],\n logger: PFrameInternal.Logger,\n): PTableRecordFilter[] {\n const filtersV1 = [];\n const filtersV2: PTableRecordSingleValueFilterV2[] = [];\n for (const filter of filters) {\n if ((filter.type as unknown) === \"bySingleColumn\") {\n filtersV1.push(filter);\n filtersV2.push({\n ...filter,\n type: \"bySingleColumnV2\",\n });\n } else {\n filtersV2.push(filter);\n }\n }\n if (filtersV1.length > 0) {\n const filtersV1Json = JSON.stringify(filtersV1);\n logger(\n \"warn\",\n `type overwritten from 'bySingleColumn' to 'bySingleColumnV2' for filters: ${filtersV1Json}`,\n );\n }\n return filtersV2;\n}\n\nfunction migrateTableFilter<T>(\n def: Omit<PTableDef<T>, \"partitionFilters\"> | PTableDef<T>,\n logger: PFrameInternal.Logger,\n): PTableDef<T> {\n if (!(\"partitionFilters\" in def)) {\n // For old blocks assume all axes filters to be partition filters\n return {\n ...def,\n partitionFilters: migrateFilters(\n def.filters.filter((f) => f.column.type === \"axis\"),\n logger,\n ),\n filters: migrateFilters(\n def.filters.filter((f) => f.column.type === \"column\"),\n logger,\n ),\n };\n }\n return {\n ...def,\n partitionFilters: migrateFilters(def.partitionFilters, logger),\n filters: migrateFilters(def.filters, logger),\n 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package/dist/driver_impl.d.ts.map CHANGED
@@ -1 +1 @@
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package/dist/driver_impl.js CHANGED
@@ -6,7 +6,7 @@ import { PTablePool } from "./ptable_pool.js";
6
6
  import { PTableCachePerFrame, PTableCachePerFrameOpsDefaults } from "./ptable_cache_per_frame.js";
7
7
  import { PTableCachePlain, PTableCachePlainOpsDefaults } from "./ptable_cache_plain.js";
8
8
  import { _usingCtx } from "./_virtual/_@oxc-project_runtime@0.123.0/helpers/usingCtx.js";
9
- import { PFrameDriverError, ValueType, bigintReplacer, canonicalizeJson, collectSpecQueryColumns, extractAllColumns, mapPObjectData, mapPTableDef, mapSpecQueryColumns, resolveAnnotationParents, sortPTableDef, sortSpecQuery, uniqueBy } from "@milaboratories/pl-model-common";
9
+ import { PFrameDriverError, ValueType, XLSX_MAX_ROWS_PER_SHEET, bigintReplacer, canonicalizeJson, collectSpecQueryColumns, extractAllColumns, mapPObjectData, mapPTableDef, mapSpecQueryColumns, resolveAnnotationParents, sortPTableDef, sortSpecQuery, uniqueBy } from "@milaboratories/pl-model-common";
10
10
  import { ConcurrencyLimitingExecutor, createPathAtomically } from "@milaboratories/ts-helpers";
11
11
  import { PoolEntryGuard, isNil } from "@milaboratories/helpers";
12
12
  import { PFrameFactory } from "@milaboratories/pframes-rs-node";
@@ -207,7 +207,6 @@ var AbstractPFrameDriver = class {
207
207
  for (const index of columnIndices) headers[index] = columnLabel(def.tableSpec[index]);
208
208
  return await this.tableConcurrencyLimiter.run(async () => {
209
209
  if (path.toLowerCase().endsWith(".xlsx")) {
210
- const XLSX_MAX_ROWS_PER_SHEET = 1e6;
211
210
  const shape = await pTable.getShape({ signal: combinedSignal });
212
211
  if (shape.rows > XLSX_MAX_ROWS_PER_SHEET) {
213
212
  const error = new PFrameDriverError(`exportPTable failed`);
package/dist/driver_impl.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"driver_impl.js","names":["fs"],"sources":["../src/driver_impl.ts"],"sourcesContent":["import {\n mapPObjectData,\n mapPTableDef,\n extractAllColumns,\n uniqueBy,\n canonicalizeJson,\n bigintReplacer,\n ValueType,\n type CalculateTableDataRequest,\n type CalculateTableDataResponse,\n type FindColumnsRequest,\n type FindColumnsResponse,\n type PColumnIdAndSpec,\n type PColumnSpec,\n type PFrameHandle,\n type PObjectId,\n type PTableColumnSpec,\n type PTableHandle,\n type PTableShape,\n type PTableVector,\n type TableRange,\n type UniqueValuesRequest,\n type UniqueValuesResponse,\n type PColumn,\n type PFrameDef,\n type PTableDef,\n type PTableRecordSingleValueFilterV2,\n type PTableRecordFilter,\n type JsonSerializable,\n type PTableDefV2,\n mapSpecQueryColumns,\n collectSpecQueryColumns,\n sortSpecQuery,\n sortPTableDef,\n resolveAnnotationParents,\n PFrameDriverError,\n} from \"@milaboratories/pl-model-common\";\nimport type { PFrameInternal } from \"@milaboratories/pl-model-middle-layer\";\nimport {\n ConcurrencyLimitingExecutor,\n createPathAtomically,\n type MiLogger,\n} from \"@milaboratories/ts-helpers\";\nimport { isNil, PoolEntryGuard, type PoolEntry } from \"@milaboratories/helpers\";\nimport { PFrameFactory } from \"@milaboratories/pframes-rs-node\";\nimport { expandAxes, findTableColumn, rewriteLegacyFilters } from \"@milaboratories/pframes-rs-wasm\";\nimport { tmpdir } from \"node:os\";\nimport * as fs from \"node:fs\";\nimport { Readable } from \"node:stream\";\nimport { pipeline } from \"node:stream/promises\";\nimport * as zlib from \"node:zlib\";\nimport { columnLabel, streamPTableRows } from \"./csv_writer\";\nimport type {\n AbstractInternalPFrameDriver,\n WritePTableToFsOptions,\n WritePTableToFsResult,\n ExportPTableOptions,\n} from \"./driver_decl\";\nimport { logPFrames } from \"./logging\";\nimport {\n PFramePool,\n type LocalBlobProvider as PoolLocalBlobProvider,\n type RemoteBlobProvider as PoolRemoteBlobProvider,\n} from \"./pframe_pool\";\nimport { PTableDefPool } from \"./ptable_def_pool\";\nimport { PTablePool } from \"./ptable_pool\";\nimport {\n PTableCachePerFrame,\n PTableCachePerFrameOpsDefaults,\n type PTableCachePerFrameOps,\n} from \"./ptable_cache_per_frame\";\nimport {\n PTableCachePlain,\n PTableCachePlainOpsDefaults,\n type PTableCachePlainOps,\n} from \"./ptable_cache_plain\";\n\nexport interface LocalBlobProvider<TreeEntry extends JsonSerializable>\n extends PoolLocalBlobProvider<TreeEntry>, AsyncDisposable {}\n\nexport interface RemoteBlobProvider<TreeEntry extends JsonSerializable>\n extends PoolRemoteBlobProvider<TreeEntry>, AsyncDisposable {}\n\nexport type AbstractPFrameDriverOps = PTableCachePerFrameOps &\n PTableCachePlainOps & {\n /** Concurrency limits for `getUniqueValues` and `calculateTableData` requests */\n pFrameConcurrency: number;\n /** Concurrency limits for `getShape` and `getData` requests */\n pTableConcurrency: number;\n };\n\nexport const AbstractPFrameDriverOpsDefaults: AbstractPFrameDriverOps = {\n ...PTableCachePerFrameOpsDefaults,\n ...PTableCachePlainOpsDefaults,\n pFrameConcurrency: 1, // 1 join is executed in parallel and utilize all RAM and CPU cores\n pTableConcurrency: 1, // 1 joined table is read from disk at a time, which matches 1 table the user can view in the UI\n};\n\nexport type DataInfoResolver<PColumnData, TreeEntry extends JsonSerializable> = (\n spec: PColumnSpec,\n data: PColumnData,\n) => PFrameInternal.DataInfo<TreeEntry>;\n\nexport class AbstractPFrameDriver<\n PColumnData,\n TreeEntry extends JsonSerializable,\n> implements AbstractInternalPFrameDriver<PColumnData> {\n private readonly logger: PFrameInternal.Logger;\n\n private readonly localBlobProvider: LocalBlobProvider<TreeEntry>;\n private readonly remoteBlobProvider: RemoteBlobProvider<TreeEntry>;\n\n private readonly resolveDataInfo: DataInfoResolver<PColumnData, TreeEntry>;\n\n private readonly pFrames: PFramePool<TreeEntry>;\n private readonly pTableDefs: PTableDefPool;\n private readonly pTables: PTablePool<TreeEntry>;\n\n private readonly pTableCachePerFrame: PTableCachePerFrame;\n private readonly pTableCachePlain: PTableCachePlain;\n\n private readonly frameConcurrencyLimiter: ConcurrencyLimitingExecutor;\n private readonly tableConcurrencyLimiter: ConcurrencyLimitingExecutor;\n\n public async pprofDump(): Promise<Uint8Array> {\n return await PFrameFactory.pprofDump();\n }\n\n public constructor({\n logger = () => {},\n localBlobProvider,\n remoteBlobProvider,\n spillPath = tmpdir(),\n options = AbstractPFrameDriverOpsDefaults,\n resolveDataInfo,\n }: {\n logger?: PFrameInternal.Logger;\n localBlobProvider: LocalBlobProvider<TreeEntry>;\n remoteBlobProvider: RemoteBlobProvider<TreeEntry>;\n spillPath?: string;\n options?: AbstractPFrameDriverOps;\n resolveDataInfo: DataInfoResolver<PColumnData, TreeEntry>;\n }) {\n this.logger = logger;\n\n this.localBlobProvider = localBlobProvider;\n this.remoteBlobProvider = remoteBlobProvider;\n\n this.resolveDataInfo = resolveDataInfo;\n\n this.frameConcurrencyLimiter = new ConcurrencyLimitingExecutor(options.pFrameConcurrency);\n this.tableConcurrencyLimiter = new ConcurrencyLimitingExecutor(options.pTableConcurrency);\n\n this.pFrames = new PFramePool(\n this.localBlobProvider,\n this.remoteBlobProvider,\n this.logger,\n spillPath,\n );\n this.pTableDefs = new PTableDefPool(this.logger);\n this.pTables = new PTablePool(this.pFrames, this.pTableDefs, this.logger);\n\n this.pTableCachePerFrame = new PTableCachePerFrame(this.logger, options);\n this.pTableCachePlain = new PTableCachePlain(this.logger, options);\n }\n\n async dispose(): Promise<void> {\n void (await Promise.allSettled([\n this.pTables[Symbol.asyncDispose](),\n this.pTableDefs[Symbol.asyncDispose](),\n this.pFrames[Symbol.asyncDispose](),\n this.localBlobProvider[Symbol.asyncDispose](),\n this.remoteBlobProvider[Symbol.asyncDispose](),\n ]));\n }\n\n async [Symbol.asyncDispose](): Promise<void> {\n return await this.dispose();\n }\n\n //\n // Internal / Config API Methods\n //\n\n public createPFrame(def: PFrameDef<PColumn<PColumnData>>): PoolEntry<PFrameHandle> {\n const ValueTypes = new Set(Object.values(ValueType));\n const supportedColumns = def\n .filter((column) => ValueTypes.has(column.spec.valueType))\n .map((c) => ({ ...c, spec: resolveAnnotationParents(c.spec) }));\n const uniqueColumns = uniqueBy(supportedColumns, (column) => column.id);\n const columns = uniqueColumns.map((c) =>\n mapPObjectData(c, (d) => this.resolveDataInfo(c.spec, d)),\n );\n\n return this.pFrames.acquire(columns);\n }\n\n public createPTable(rawDef: PTableDef<PColumn<PColumnData>>): PoolEntry<PTableHandle> {\n const columns = uniqueBy(extractAllColumns(rawDef.src), (c) => c.id);\n using pFrameGuard = new PoolEntryGuard(this.createPFrame(columns));\n const sortedDef = sortPTableDef(\n migrateTableFilter(\n mapPTableDef(rawDef, (c) => c.id),\n this.logger,\n ),\n );\n const pFrameSpec = this.pFrames.getByKey(pFrameGuard.key).pFrameSpec;\n using pTableGuard = new PoolEntryGuard(\n this.pTableDefs.acquireFromLegacy({\n pFrameHandle: pFrameGuard.key,\n def: sortedDef,\n pFrameSpec,\n }).entry,\n );\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Create PTable call (pFrameHandle = ${pFrameGuard.key}; pTableHandle = ${pTableGuard.key})`,\n );\n }\n\n const pFrameEntry = pFrameGuard.keep();\n const pTableEntry = pTableGuard.keep();\n const unref = () => {\n pTableEntry.unref();\n pFrameEntry.unref();\n };\n return {\n key: pTableEntry.key,\n resource: pTableEntry.resource,\n unref,\n [Symbol.dispose]: unref,\n };\n }\n\n public createPTableV2(def: PTableDefV2<PColumn<PColumnData>>): PoolEntry<PTableHandle> {\n const columns = uniqueBy(collectSpecQueryColumns(def.query), (c) => c.id);\n using pFrameGuard = new PoolEntryGuard(this.createPFrame(columns));\n const pFrameSpec = this.pFrames.getByKey(pFrameGuard.key).pFrameSpec;\n const sortedQuery = sortSpecQuery(mapSpecQueryColumns(def.query, (c) => c.id));\n const { tableSpec, dataQuery } = pFrameSpec.evaluateQuery(sortedQuery);\n\n using pTableGuard = new PoolEntryGuard(\n this.pTableDefs.acquire({\n pFrameHandle: pFrameGuard.key,\n tableSpec,\n dataQuery,\n }),\n );\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Create PTable call (pFrameHandle = ${pFrameGuard.key}; pTableHandle = ${pTableGuard.key})`,\n );\n }\n\n const pFrameEntry = pFrameGuard.keep();\n const pTableEntry = pTableGuard.keep();\n const unref = () => {\n pTableEntry.unref();\n pFrameEntry.unref();\n };\n return {\n key: pTableEntry.key,\n resource: pTableEntry.resource,\n unref,\n [Symbol.dispose]: unref,\n };\n }\n\n public async writePTableToFs(\n handle: PTableHandle,\n options: WritePTableToFsOptions,\n ): Promise<WritePTableToFsResult> {\n this.logger(\n \"info\",\n `[WritePTableToFs] ENTER (handle = ${handle}, path = ${options.path}, format = ${options.format}, compression = ${options.compression ?? \"auto\"}, columns = ${options.columnIndices.length})`,\n );\n const startTime = performance.now();\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any(\n [options.signal, disposeSignal].filter((s): s is AbortSignal => !isNil(s)),\n );\n\n return await this.tableConcurrencyLimiter.run(async () => {\n const shape = await pTable.getShape({ signal: combinedSignal });\n const clippedRange = clipRange(options.range, shape);\n const specs = def.tableSpec;\n const separator = options.format === \"tsv\" ? \"\\t\" : \",\";\n\n const iterable = streamPTableRows({\n pTable,\n specs,\n columnIndices: options.columnIndices,\n range: clippedRange,\n chunkSize: options.chunkSize ?? 50_000,\n separator,\n includeHeader: options.includeHeader ?? true,\n bom: options.bom ?? true,\n signal: combinedSignal,\n });\n\n const miLogger: MiLogger = {\n info: (msg) => this.logger(\"info\", String(msg)),\n warn: (msg) => this.logger(\"warn\", String(msg)),\n error: (msg) => this.logger(\"error\", String(msg)),\n };\n\n let bytesWritten = 0;\n await createPathAtomically(miLogger, options.path, async (tempPath) => {\n const writeStream = fs.createWriteStream(tempPath, { flags: \"wx\" });\n const source = Readable.from(iterable, { objectMode: false });\n if (options.compression?.type === \"gzip\") {\n const gzip = zlib.createGzip({ level: options.compression.level ?? 6 });\n await pipeline(source, gzip, writeStream, { signal: combinedSignal });\n } else {\n await pipeline(source, writeStream, { signal: combinedSignal });\n }\n bytesWritten = writeStream.bytesWritten;\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n\n // rowsWritten equals the clipped range length — the generator streams the\n // entire effective range without early termination, so this is accurate.\n const rowsWritten = clippedRange.length;\n\n if (logPFrames()) {\n const durationMs = Math.round(performance.now() - startTime);\n this.logger(\n \"info\",\n `[WritePTableToFs] complete (handle = ${handle}, columns = ${options.columnIndices.length}, rows = ${rowsWritten}, bytes = ${bytesWritten}, duration = ${durationMs}ms)`,\n );\n }\n\n return { path: options.path, rowsWritten, bytesWritten };\n });\n }\n\n public async exportPTable(\n handle: PTableHandle,\n options: ExportPTableOptions,\n signal?: AbortSignal,\n ): Promise<void> {\n const { path, columnIndices } = options;\n\n this.logger(\"info\", `[ExportPTable] ENTER (handle = ${handle}, path = ${path})`);\n const startTime = performance.now();\n\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any(\n [signal, disposeSignal].filter((s): s is AbortSignal => !isNil(s)),\n );\n\n const headers: Record<number, string> = {};\n for (const index of columnIndices) {\n headers[index] = columnLabel(def.tableSpec[index]);\n }\n\n return await this.tableConcurrencyLimiter.run(async () => {\n // Cap data rows per xlsx sheet below Excel's hard limit of 1,048,576.\n if (path.toLowerCase().endsWith(\".xlsx\")) {\n const XLSX_MAX_ROWS_PER_SHEET = 1_000_000;\n const shape = await pTable.getShape({ signal: combinedSignal });\n if (shape.rows > XLSX_MAX_ROWS_PER_SHEET) {\n const error = new PFrameDriverError(`exportPTable failed`);\n error.cause = new Error(\n `xlsx export rejected: ${shape.rows} rows exceed the per-sheet ` +\n `limit of ${XLSX_MAX_ROWS_PER_SHEET} rows`,\n );\n throw error;\n }\n }\n\n await pTable.export(path, headers, { signal: combinedSignal });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n\n if (logPFrames()) {\n const durationMs = Math.round(performance.now() - startTime);\n this.logger(\n \"info\",\n `[ExportPTable] complete (handle = ${handle}, path = ${path}), ` +\n `duration = ${durationMs}ms`,\n );\n }\n });\n }\n\n //\n // PFrame instance methods\n //\n\n public async findColumns(\n handle: PFrameHandle,\n request: FindColumnsRequest,\n ): Promise<FindColumnsResponse> {\n const iRequest: PFrameInternal.FindColumnsRequest = {\n ...request,\n compatibleWith:\n request.compatibleWith.length !== 0\n ? [\n {\n axesSpec: [\n ...new Map(\n request.compatibleWith.map((item) => [canonicalizeJson(item), item] as const),\n ).values(),\n ],\n qualifications: [],\n },\n ]\n : [],\n };\n\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const response = pFrameSpec.findColumns(iRequest);\n return {\n hits: response.hits\n .filter(\n (h) =>\n // only exactly matching columns\n h.mappingVariants.length === 0 ||\n h.mappingVariants.some(\n (v) =>\n v.qualifications.forHit.length === 0 &&\n v.qualifications.forQueries.every((q) => q.length === 0),\n ),\n )\n .map((h) => h.hit),\n };\n }\n\n public async getColumnSpec(\n handle: PFrameHandle,\n columnId: PObjectId,\n ): Promise<PColumnSpec | null> {\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const info = pFrameSpec.listColumns().find((c) => c.columnId === columnId);\n return info?.spec ?? null;\n }\n\n public async listColumns(handle: PFrameHandle): Promise<PColumnIdAndSpec[]> {\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n return pFrameSpec.listColumns().map(({ columnId, spec }) => ({ columnId, spec }));\n }\n\n public async calculateTableData(\n handle: PFrameHandle,\n request: CalculateTableDataRequest<PObjectId>,\n range: TableRange | undefined,\n signal?: AbortSignal,\n ): Promise<CalculateTableDataResponse> {\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Call calculateTableData, handle = ${handle}, request = ${JSON.stringify(request, bigintReplacer)}`,\n );\n }\n\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const sortedDef = sortPTableDef(migrateTableFilter(request, this.logger));\n const { def, entry } = this.pTables.acquireFromLegacy({\n pFrameHandle: handle,\n def: sortedDef,\n pFrameSpec,\n });\n using tableGuard = new PoolEntryGuard(entry);\n const tableSpec = def.tableSpec;\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n return await this.frameConcurrencyLimiter.run(async () => {\n // TODO: throw error when more then 150k rows is requested\n // after pf-plots migration to stream API\n\n const data = await pTable.getData([...tableSpec.keys()], {\n range,\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePerFrame.cache(tableGuard.keep(), overallSize);\n\n return tableSpec.map((spec, i) => ({\n spec: spec,\n data: data[i],\n }));\n });\n }\n\n public async getUniqueValues(\n handle: PFrameHandle,\n request: UniqueValuesRequest,\n signal?: AbortSignal,\n ): Promise<UniqueValuesResponse> {\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Call getUniqueValues, handle = ${handle}, request = ${JSON.stringify(request, bigintReplacer)}`,\n );\n }\n\n const { pFrameDataPromise, pFrameSpec, disposeSignal } = this.pFrames.getByKey(handle);\n const pFrameData = await pFrameDataPromise;\n\n const column = pFrameSpec.listColumns().find((c) => c.columnId === request.columnId);\n if (!column) {\n const error = new PFrameDriverError(`getUniqueValues failed`);\n error.cause = new Error(`column ${request.columnId} is not registered in the PFrame`);\n throw error;\n }\n\n const axisIds = expandAxes(column.spec.axesSpec);\n const tableSpec: PTableColumnSpec[] = [\n ...column.spec.axesSpec.map(\n (axisSpec, i): PTableColumnSpec => ({\n type: \"axis\",\n id: axisIds[i],\n spec: axisSpec,\n }),\n ),\n { type: \"column\", id: request.columnId, spec: column.spec },\n ];\n\n let axisIndex: number | undefined;\n if (request.axis !== undefined) {\n const index = findTableColumn(tableSpec, { type: \"axis\", id: request.axis });\n if (index < 0) {\n const error = new PFrameDriverError(`getUniqueValues failed`);\n error.cause = new Error(\n `axis ${JSON.stringify(request.axis)} not found among axes of column ${request.columnId}`,\n );\n throw error;\n }\n axisIndex = index;\n }\n\n const resolvedRequest: PFrameInternal.UniqueValuesRequestV2 = {\n columnId: request.columnId,\n axisIndex,\n filters: rewriteLegacyFilters({\n tableSpec,\n filters: migrateFilters(request.filters, this.logger),\n }),\n limit: request.limit,\n };\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n return await this.frameConcurrencyLimiter.run(async () => {\n return await pFrameData.getUniqueValues(resolvedRequest, { signal: combinedSignal });\n });\n }\n\n //\n // PTable instance methods\n //\n\n public async getSpec(handle: PTableHandle): Promise<PTableColumnSpec[]> {\n const { def } = this.pTableDefs.getByKey(handle);\n return def.tableSpec;\n }\n\n public async getShape(handle: PTableHandle, signal?: AbortSignal): Promise<PTableShape> {\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n const { shape, overallSize } = await this.tableConcurrencyLimiter.run(async () => {\n const shape = await pTable.getShape({\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n\n return { shape, overallSize };\n });\n\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n return shape;\n }\n\n public async getData(\n handle: PTableHandle,\n columnIndices: number[],\n range: TableRange | undefined,\n signal?: AbortSignal,\n ): Promise<PTableVector[]> {\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n const { data, overallSize } = await this.tableConcurrencyLimiter.run(async () => {\n const data = await pTable.getData(columnIndices, {\n range,\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n\n return { data, overallSize };\n });\n\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n return data;\n }\n}\n\n/** Clamp range to table shape. 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1
+ {"version":3,"file":"driver_impl.js","names":["fs"],"sources":["../src/driver_impl.ts"],"sourcesContent":["import {\n mapPObjectData,\n mapPTableDef,\n extractAllColumns,\n uniqueBy,\n canonicalizeJson,\n bigintReplacer,\n ValueType,\n type CalculateTableDataRequest,\n type CalculateTableDataResponse,\n type FindColumnsRequest,\n type FindColumnsResponse,\n type PColumnIdAndSpec,\n type PColumnSpec,\n type PFrameHandle,\n type PObjectId,\n type PTableColumnSpec,\n type PTableHandle,\n type PTableShape,\n type PTableVector,\n type TableRange,\n type UniqueValuesRequest,\n type UniqueValuesResponse,\n type PColumn,\n type PFrameDef,\n type PTableDef,\n type PTableRecordSingleValueFilterV2,\n type PTableRecordFilter,\n type JsonSerializable,\n type PTableDefV2,\n mapSpecQueryColumns,\n collectSpecQueryColumns,\n sortSpecQuery,\n sortPTableDef,\n resolveAnnotationParents,\n PFrameDriverError,\n XLSX_MAX_ROWS_PER_SHEET,\n} from \"@milaboratories/pl-model-common\";\nimport type { PFrameInternal } from \"@milaboratories/pl-model-middle-layer\";\nimport {\n ConcurrencyLimitingExecutor,\n createPathAtomically,\n type MiLogger,\n} from \"@milaboratories/ts-helpers\";\nimport { isNil, PoolEntryGuard, type PoolEntry } from \"@milaboratories/helpers\";\nimport { PFrameFactory } from \"@milaboratories/pframes-rs-node\";\nimport { expandAxes, findTableColumn, rewriteLegacyFilters } from \"@milaboratories/pframes-rs-wasm\";\nimport { tmpdir } from \"node:os\";\nimport * as fs from \"node:fs\";\nimport { Readable } from \"node:stream\";\nimport { pipeline } from \"node:stream/promises\";\nimport * as zlib from \"node:zlib\";\nimport { columnLabel, streamPTableRows } from \"./csv_writer\";\nimport type {\n AbstractInternalPFrameDriver,\n WritePTableToFsOptions,\n WritePTableToFsResult,\n ExportPTableOptions,\n} from \"./driver_decl\";\nimport { logPFrames } from \"./logging\";\nimport {\n PFramePool,\n type LocalBlobProvider as PoolLocalBlobProvider,\n type RemoteBlobProvider as PoolRemoteBlobProvider,\n} from \"./pframe_pool\";\nimport { PTableDefPool } from \"./ptable_def_pool\";\nimport { PTablePool } from \"./ptable_pool\";\nimport {\n PTableCachePerFrame,\n PTableCachePerFrameOpsDefaults,\n type PTableCachePerFrameOps,\n} from \"./ptable_cache_per_frame\";\nimport {\n PTableCachePlain,\n PTableCachePlainOpsDefaults,\n type PTableCachePlainOps,\n} from \"./ptable_cache_plain\";\n\nexport interface LocalBlobProvider<TreeEntry extends JsonSerializable>\n extends PoolLocalBlobProvider<TreeEntry>, AsyncDisposable {}\n\nexport interface RemoteBlobProvider<TreeEntry extends JsonSerializable>\n extends PoolRemoteBlobProvider<TreeEntry>, AsyncDisposable {}\n\nexport type AbstractPFrameDriverOps = PTableCachePerFrameOps &\n PTableCachePlainOps & {\n /** Concurrency limits for `getUniqueValues` and `calculateTableData` requests */\n pFrameConcurrency: number;\n /** Concurrency limits for `getShape` and `getData` requests */\n pTableConcurrency: number;\n };\n\nexport const AbstractPFrameDriverOpsDefaults: AbstractPFrameDriverOps = {\n ...PTableCachePerFrameOpsDefaults,\n ...PTableCachePlainOpsDefaults,\n pFrameConcurrency: 1, // 1 join is executed in parallel and utilize all RAM and CPU cores\n pTableConcurrency: 1, // 1 joined table is read from disk at a time, which matches 1 table the user can view in the UI\n};\n\nexport type DataInfoResolver<PColumnData, TreeEntry extends JsonSerializable> = (\n spec: PColumnSpec,\n data: PColumnData,\n) => PFrameInternal.DataInfo<TreeEntry>;\n\nexport class AbstractPFrameDriver<\n PColumnData,\n TreeEntry extends JsonSerializable,\n> implements AbstractInternalPFrameDriver<PColumnData> {\n private readonly logger: PFrameInternal.Logger;\n\n private readonly localBlobProvider: LocalBlobProvider<TreeEntry>;\n private readonly remoteBlobProvider: RemoteBlobProvider<TreeEntry>;\n\n private readonly resolveDataInfo: DataInfoResolver<PColumnData, TreeEntry>;\n\n private readonly pFrames: PFramePool<TreeEntry>;\n private readonly pTableDefs: PTableDefPool;\n private readonly pTables: PTablePool<TreeEntry>;\n\n private readonly pTableCachePerFrame: PTableCachePerFrame;\n private readonly pTableCachePlain: PTableCachePlain;\n\n private readonly frameConcurrencyLimiter: ConcurrencyLimitingExecutor;\n private readonly tableConcurrencyLimiter: ConcurrencyLimitingExecutor;\n\n public async pprofDump(): Promise<Uint8Array> {\n return await PFrameFactory.pprofDump();\n }\n\n public constructor({\n logger = () => {},\n localBlobProvider,\n remoteBlobProvider,\n spillPath = tmpdir(),\n options = AbstractPFrameDriverOpsDefaults,\n resolveDataInfo,\n }: {\n logger?: PFrameInternal.Logger;\n localBlobProvider: LocalBlobProvider<TreeEntry>;\n remoteBlobProvider: RemoteBlobProvider<TreeEntry>;\n spillPath?: string;\n options?: AbstractPFrameDriverOps;\n resolveDataInfo: DataInfoResolver<PColumnData, TreeEntry>;\n }) {\n this.logger = logger;\n\n this.localBlobProvider = localBlobProvider;\n this.remoteBlobProvider = remoteBlobProvider;\n\n this.resolveDataInfo = resolveDataInfo;\n\n this.frameConcurrencyLimiter = new ConcurrencyLimitingExecutor(options.pFrameConcurrency);\n this.tableConcurrencyLimiter = new ConcurrencyLimitingExecutor(options.pTableConcurrency);\n\n this.pFrames = new PFramePool(\n this.localBlobProvider,\n this.remoteBlobProvider,\n this.logger,\n spillPath,\n );\n this.pTableDefs = new PTableDefPool(this.logger);\n this.pTables = new PTablePool(this.pFrames, this.pTableDefs, this.logger);\n\n this.pTableCachePerFrame = new PTableCachePerFrame(this.logger, options);\n this.pTableCachePlain = new PTableCachePlain(this.logger, options);\n }\n\n async dispose(): Promise<void> {\n void (await Promise.allSettled([\n this.pTables[Symbol.asyncDispose](),\n this.pTableDefs[Symbol.asyncDispose](),\n this.pFrames[Symbol.asyncDispose](),\n this.localBlobProvider[Symbol.asyncDispose](),\n this.remoteBlobProvider[Symbol.asyncDispose](),\n ]));\n }\n\n async [Symbol.asyncDispose](): Promise<void> {\n return await this.dispose();\n }\n\n //\n // Internal / Config API Methods\n //\n\n public createPFrame(def: PFrameDef<PColumn<PColumnData>>): PoolEntry<PFrameHandle> {\n const ValueTypes = new Set(Object.values(ValueType));\n const supportedColumns = def\n .filter((column) => ValueTypes.has(column.spec.valueType))\n .map((c) => ({ ...c, spec: resolveAnnotationParents(c.spec) }));\n const uniqueColumns = uniqueBy(supportedColumns, (column) => column.id);\n const columns = uniqueColumns.map((c) =>\n mapPObjectData(c, (d) => this.resolveDataInfo(c.spec, d)),\n );\n\n return this.pFrames.acquire(columns);\n }\n\n public createPTable(rawDef: PTableDef<PColumn<PColumnData>>): PoolEntry<PTableHandle> {\n const columns = uniqueBy(extractAllColumns(rawDef.src), (c) => c.id);\n using pFrameGuard = new PoolEntryGuard(this.createPFrame(columns));\n const sortedDef = sortPTableDef(\n migrateTableFilter(\n mapPTableDef(rawDef, (c) => c.id),\n this.logger,\n ),\n );\n const pFrameSpec = this.pFrames.getByKey(pFrameGuard.key).pFrameSpec;\n using pTableGuard = new PoolEntryGuard(\n this.pTableDefs.acquireFromLegacy({\n pFrameHandle: pFrameGuard.key,\n def: sortedDef,\n pFrameSpec,\n }).entry,\n );\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Create PTable call (pFrameHandle = ${pFrameGuard.key}; pTableHandle = ${pTableGuard.key})`,\n );\n }\n\n const pFrameEntry = pFrameGuard.keep();\n const pTableEntry = pTableGuard.keep();\n const unref = () => {\n pTableEntry.unref();\n pFrameEntry.unref();\n };\n return {\n key: pTableEntry.key,\n resource: pTableEntry.resource,\n unref,\n [Symbol.dispose]: unref,\n };\n }\n\n public createPTableV2(def: PTableDefV2<PColumn<PColumnData>>): PoolEntry<PTableHandle> {\n const columns = uniqueBy(collectSpecQueryColumns(def.query), (c) => c.id);\n using pFrameGuard = new PoolEntryGuard(this.createPFrame(columns));\n const pFrameSpec = this.pFrames.getByKey(pFrameGuard.key).pFrameSpec;\n const sortedQuery = sortSpecQuery(mapSpecQueryColumns(def.query, (c) => c.id));\n const { tableSpec, dataQuery } = pFrameSpec.evaluateQuery(sortedQuery);\n\n using pTableGuard = new PoolEntryGuard(\n this.pTableDefs.acquire({\n pFrameHandle: pFrameGuard.key,\n tableSpec,\n dataQuery,\n }),\n );\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Create PTable call (pFrameHandle = ${pFrameGuard.key}; pTableHandle = ${pTableGuard.key})`,\n );\n }\n\n const pFrameEntry = pFrameGuard.keep();\n const pTableEntry = pTableGuard.keep();\n const unref = () => {\n pTableEntry.unref();\n pFrameEntry.unref();\n };\n return {\n key: pTableEntry.key,\n resource: pTableEntry.resource,\n unref,\n [Symbol.dispose]: unref,\n };\n }\n\n public async writePTableToFs(\n handle: PTableHandle,\n options: WritePTableToFsOptions,\n ): Promise<WritePTableToFsResult> {\n this.logger(\n \"info\",\n `[WritePTableToFs] ENTER (handle = ${handle}, path = ${options.path}, format = ${options.format}, compression = ${options.compression ?? \"auto\"}, columns = ${options.columnIndices.length})`,\n );\n const startTime = performance.now();\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any(\n [options.signal, disposeSignal].filter((s): s is AbortSignal => !isNil(s)),\n );\n\n return await this.tableConcurrencyLimiter.run(async () => {\n const shape = await pTable.getShape({ signal: combinedSignal });\n const clippedRange = clipRange(options.range, shape);\n const specs = def.tableSpec;\n const separator = options.format === \"tsv\" ? \"\\t\" : \",\";\n\n const iterable = streamPTableRows({\n pTable,\n specs,\n columnIndices: options.columnIndices,\n range: clippedRange,\n chunkSize: options.chunkSize ?? 50_000,\n separator,\n includeHeader: options.includeHeader ?? true,\n bom: options.bom ?? true,\n signal: combinedSignal,\n });\n\n const miLogger: MiLogger = {\n info: (msg) => this.logger(\"info\", String(msg)),\n warn: (msg) => this.logger(\"warn\", String(msg)),\n error: (msg) => this.logger(\"error\", String(msg)),\n };\n\n let bytesWritten = 0;\n await createPathAtomically(miLogger, options.path, async (tempPath) => {\n const writeStream = fs.createWriteStream(tempPath, { flags: \"wx\" });\n const source = Readable.from(iterable, { objectMode: false });\n if (options.compression?.type === \"gzip\") {\n const gzip = zlib.createGzip({ level: options.compression.level ?? 6 });\n await pipeline(source, gzip, writeStream, { signal: combinedSignal });\n } else {\n await pipeline(source, writeStream, { signal: combinedSignal });\n }\n bytesWritten = writeStream.bytesWritten;\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n\n // rowsWritten equals the clipped range length — the generator streams the\n // entire effective range without early termination, so this is accurate.\n const rowsWritten = clippedRange.length;\n\n if (logPFrames()) {\n const durationMs = Math.round(performance.now() - startTime);\n this.logger(\n \"info\",\n `[WritePTableToFs] complete (handle = ${handle}, columns = ${options.columnIndices.length}, rows = ${rowsWritten}, bytes = ${bytesWritten}, duration = ${durationMs}ms)`,\n );\n }\n\n return { path: options.path, rowsWritten, bytesWritten };\n });\n }\n\n public async exportPTable(\n handle: PTableHandle,\n options: ExportPTableOptions,\n signal?: AbortSignal,\n ): Promise<void> {\n const { path, columnIndices } = options;\n\n this.logger(\"info\", `[ExportPTable] ENTER (handle = ${handle}, path = ${path})`);\n const startTime = performance.now();\n\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any(\n [signal, disposeSignal].filter((s): s is AbortSignal => !isNil(s)),\n );\n\n const headers: Record<number, string> = {};\n for (const index of columnIndices) {\n headers[index] = columnLabel(def.tableSpec[index]);\n }\n\n return await this.tableConcurrencyLimiter.run(async () => {\n // Cap data rows per xlsx sheet below Excel's hard limit of 1,048,576.\n if (path.toLowerCase().endsWith(\".xlsx\")) {\n const shape = await pTable.getShape({ signal: combinedSignal });\n if (shape.rows > XLSX_MAX_ROWS_PER_SHEET) {\n const error = new PFrameDriverError(`exportPTable failed`);\n error.cause = new Error(\n `xlsx export rejected: ${shape.rows} rows exceed the per-sheet ` +\n `limit of ${XLSX_MAX_ROWS_PER_SHEET} rows`,\n );\n throw error;\n }\n }\n\n await pTable.export(path, headers, { signal: combinedSignal });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n\n if (logPFrames()) {\n const durationMs = Math.round(performance.now() - startTime);\n this.logger(\n \"info\",\n `[ExportPTable] complete (handle = ${handle}, path = ${path}), ` +\n `duration = ${durationMs}ms`,\n );\n }\n });\n }\n\n //\n // PFrame instance methods\n //\n\n public async findColumns(\n handle: PFrameHandle,\n request: FindColumnsRequest,\n ): Promise<FindColumnsResponse> {\n const iRequest: PFrameInternal.FindColumnsRequest = {\n ...request,\n compatibleWith:\n request.compatibleWith.length !== 0\n ? [\n {\n axesSpec: [\n ...new Map(\n request.compatibleWith.map((item) => [canonicalizeJson(item), item] as const),\n ).values(),\n ],\n qualifications: [],\n },\n ]\n : [],\n };\n\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const response = pFrameSpec.findColumns(iRequest);\n return {\n hits: response.hits\n .filter(\n (h) =>\n // only exactly matching columns\n h.mappingVariants.length === 0 ||\n h.mappingVariants.some(\n (v) =>\n v.qualifications.forHit.length === 0 &&\n v.qualifications.forQueries.every((q) => q.length === 0),\n ),\n )\n .map((h) => h.hit),\n };\n }\n\n public async getColumnSpec(\n handle: PFrameHandle,\n columnId: PObjectId,\n ): Promise<PColumnSpec | null> {\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const info = pFrameSpec.listColumns().find((c) => c.columnId === columnId);\n return info?.spec ?? null;\n }\n\n public async listColumns(handle: PFrameHandle): Promise<PColumnIdAndSpec[]> {\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n return pFrameSpec.listColumns().map(({ columnId, spec }) => ({ columnId, spec }));\n }\n\n public async calculateTableData(\n handle: PFrameHandle,\n request: CalculateTableDataRequest<PObjectId>,\n range: TableRange | undefined,\n signal?: AbortSignal,\n ): Promise<CalculateTableDataResponse> {\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Call calculateTableData, handle = ${handle}, request = ${JSON.stringify(request, bigintReplacer)}`,\n );\n }\n\n const { pFrameSpec } = this.pFrames.getByKey(handle);\n const sortedDef = sortPTableDef(migrateTableFilter(request, this.logger));\n const { def, entry } = this.pTables.acquireFromLegacy({\n pFrameHandle: handle,\n def: sortedDef,\n pFrameSpec,\n });\n using tableGuard = new PoolEntryGuard(entry);\n const tableSpec = def.tableSpec;\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n return await this.frameConcurrencyLimiter.run(async () => {\n // TODO: throw error when more then 150k rows is requested\n // after pf-plots migration to stream API\n\n const data = await pTable.getData([...tableSpec.keys()], {\n range,\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n this.pTableCachePerFrame.cache(tableGuard.keep(), overallSize);\n\n return tableSpec.map((spec, i) => ({\n spec: spec,\n data: data[i],\n }));\n });\n }\n\n public async getUniqueValues(\n handle: PFrameHandle,\n request: UniqueValuesRequest,\n signal?: AbortSignal,\n ): Promise<UniqueValuesResponse> {\n if (logPFrames()) {\n this.logger(\n \"info\",\n `Call getUniqueValues, handle = ${handle}, request = ${JSON.stringify(request, bigintReplacer)}`,\n );\n }\n\n const { pFrameDataPromise, pFrameSpec, disposeSignal } = this.pFrames.getByKey(handle);\n const pFrameData = await pFrameDataPromise;\n\n const column = pFrameSpec.listColumns().find((c) => c.columnId === request.columnId);\n if (!column) {\n const error = new PFrameDriverError(`getUniqueValues failed`);\n error.cause = new Error(`column ${request.columnId} is not registered in the PFrame`);\n throw error;\n }\n\n const axisIds = expandAxes(column.spec.axesSpec);\n const tableSpec: PTableColumnSpec[] = [\n ...column.spec.axesSpec.map(\n (axisSpec, i): PTableColumnSpec => ({\n type: \"axis\",\n id: axisIds[i],\n spec: axisSpec,\n }),\n ),\n { type: \"column\", id: request.columnId, spec: column.spec },\n ];\n\n let axisIndex: number | undefined;\n if (request.axis !== undefined) {\n const index = findTableColumn(tableSpec, { type: \"axis\", id: request.axis });\n if (index < 0) {\n const error = new PFrameDriverError(`getUniqueValues failed`);\n error.cause = new Error(\n `axis ${JSON.stringify(request.axis)} not found among axes of column ${request.columnId}`,\n );\n throw error;\n }\n axisIndex = index;\n }\n\n const resolvedRequest: PFrameInternal.UniqueValuesRequestV2 = {\n columnId: request.columnId,\n axisIndex,\n filters: rewriteLegacyFilters({\n tableSpec,\n filters: migrateFilters(request.filters, this.logger),\n }),\n limit: request.limit,\n };\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n return await this.frameConcurrencyLimiter.run(async () => {\n return await pFrameData.getUniqueValues(resolvedRequest, { signal: combinedSignal });\n });\n }\n\n //\n // PTable instance methods\n //\n\n public async getSpec(handle: PTableHandle): Promise<PTableColumnSpec[]> {\n const { def } = this.pTableDefs.getByKey(handle);\n return def.tableSpec;\n }\n\n public async getShape(handle: PTableHandle, signal?: AbortSignal): Promise<PTableShape> {\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n const { shape, overallSize } = await this.tableConcurrencyLimiter.run(async () => {\n const shape = await pTable.getShape({\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n\n return { shape, overallSize };\n });\n\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n return shape;\n }\n\n public async getData(\n handle: PTableHandle,\n columnIndices: number[],\n range: TableRange | undefined,\n signal?: AbortSignal,\n ): Promise<PTableVector[]> {\n const { def, disposeSignal: defDisposeSignal } = this.pTableDefs.getByKey(handle);\n using tableGuard = new PoolEntryGuard(this.pTables.acquire(def));\n\n const { pTablePromise, disposeSignal } = tableGuard.resource;\n const pTable = await pTablePromise;\n\n const combinedSignal = AbortSignal.any([signal, disposeSignal].filter((s) => !!s));\n const { data, overallSize } = await this.tableConcurrencyLimiter.run(async () => {\n const data = await pTable.getData(columnIndices, {\n range,\n signal: combinedSignal,\n });\n\n const overallSize = await tableGuard.resource.cacheSize;\n\n return { data, overallSize };\n });\n\n this.pTableCachePlain.cache(tableGuard.keep(), overallSize, defDisposeSignal);\n return data;\n }\n}\n\n/** Clamp range to table shape. When range is undefined, returns full table range. */\nfunction clipRange(range: undefined | TableRange, shape: PTableShape): TableRange {\n if (isNil(range)) {\n return { offset: 0, length: shape.rows };\n }\n const clampedOffset = Math.min(range.offset, shape.rows);\n const clampedLength = Math.min(range.length, shape.rows - clampedOffset);\n return { offset: clampedOffset, length: clampedLength };\n}\n\nfunction migrateFilters(\n filters: PTableRecordFilter[],\n logger: PFrameInternal.Logger,\n): PTableRecordFilter[] {\n const filtersV1 = [];\n const filtersV2: PTableRecordSingleValueFilterV2[] = [];\n for (const filter of filters) {\n if ((filter.type as unknown) === \"bySingleColumn\") {\n filtersV1.push(filter);\n filtersV2.push({\n ...filter,\n type: \"bySingleColumnV2\",\n });\n } else {\n filtersV2.push(filter);\n }\n }\n if (filtersV1.length > 0) {\n const filtersV1Json = JSON.stringify(filtersV1);\n logger(\n \"warn\",\n `type overwritten from 'bySingleColumn' to 'bySingleColumnV2' for filters: ${filtersV1Json}`,\n );\n }\n return filtersV2;\n}\n\nfunction migrateTableFilter<T>(\n def: Omit<PTableDef<T>, \"partitionFilters\"> | PTableDef<T>,\n logger: PFrameInternal.Logger,\n): PTableDef<T> {\n if (!(\"partitionFilters\" in def)) {\n // For old blocks assume all axes filters to be partition filters\n return {\n ...def,\n partitionFilters: migrateFilters(\n def.filters.filter((f) => f.column.type === \"axis\"),\n logger,\n ),\n filters: migrateFilters(\n def.filters.filter((f) => f.column.type === \"column\"),\n logger,\n ),\n };\n }\n return {\n ...def,\n partitionFilters: migrateFilters(def.partitionFilters, logger),\n filters: migrateFilters(def.filters, logger),\n 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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@milaboratories/pf-driver",
3
- "version": "1.7.1",
3
+ "version": "1.7.3",
4
4
  "description": "PFrameDriver implementation abstracted from Middle Layer",
5
5
  "keywords": [],
6
6
  "license": "UNLICENSED",
@@ -25,9 +25,9 @@
25
25
  "es-toolkit": "^1.39.10",
26
26
  "lru-cache": "^11.2.2",
27
27
  "@milaboratories/helpers": "1.14.2",
28
- "@milaboratories/pl-model-common": "1.45.0",
29
- "@milaboratories/pl-model-middle-layer": "1.29.1",
30
- "@milaboratories/ts-helpers": "1.8.2"
28
+ "@milaboratories/pl-model-common": "1.46.0",
29
+ "@milaboratories/ts-helpers": "1.8.2",
30
+ "@milaboratories/pl-model-middle-layer": "1.30.0"
31
31
  },
32
32
  "devDependencies": {
33
33
  "@types/node": "~24.5.2",
@@ -35,9 +35,9 @@
35
35
  "fast-csv": "5.0.5",
36
36
  "typescript": "~5.9.3",
37
37
  "vitest": "^4.1.3",
38
- "@milaboratories/build-configs": "2.0.0",
38
+ "@milaboratories/ts-configs": "1.2.3",
39
39
  "@milaboratories/ts-builder": "1.5.0",
40
- "@milaboratories/ts-configs": "1.2.3"
40
+ "@milaboratories/build-configs": "2.0.0"
41
41
  },
42
42
  "engines": {
43
43
  "node": ">=22.19.0"
package/src/driver_impl.ts CHANGED
@@ -34,6 +34,7 @@ import {
34
34
  sortPTableDef,
35
35
  resolveAnnotationParents,
36
36
  PFrameDriverError,
37
+ XLSX_MAX_ROWS_PER_SHEET,
37
38
  } from "@milaboratories/pl-model-common";
38
39
  import type { PFrameInternal } from "@milaboratories/pl-model-middle-layer";
39
40
  import {
@@ -369,7 +370,6 @@ export class AbstractPFrameDriver<
369
370
  return await this.tableConcurrencyLimiter.run(async () => {
370
371
  // Cap data rows per xlsx sheet below Excel's hard limit of 1,048,576.
371
372
  if (path.toLowerCase().endsWith(".xlsx")) {
372
- const XLSX_MAX_ROWS_PER_SHEET = 1_000_000;
373
373
  const shape = await pTable.getShape({ signal: combinedSignal });
374
374
  if (shape.rows > XLSX_MAX_ROWS_PER_SHEET) {
375
375
  const error = new PFrameDriverError(`exportPTable failed`);