@milaboratories/miplots4 1.0.173 → 1.0.175

package/dist/heatmap/fillCellsData.js.map

@@ -1 +1 @@
-{"version":3,"file":"fillCellsData.js","sources":["../../src/heatmap/fillCellsData.ts"],"sourcesContent":["import { deviation, extent, mean, quantileSorted, sum } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { AggregationMethod, ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { exhaustive } from '../utils';\nimport { getFacetOrGroupKey } from '../utils/getFacetOrGroupKey';\nimport type { BubbleSettingsImpl } from '../bubble/BubbleSettingsImpl';\nimport { getFacetLabels } from '../discrete/utils/getFacetLabels';\n\nexport type Cell<T extends string> = {\n    isCell: true;\n    idx: number;\n    id: string;\n    value: Record<T, DataValue>;\n    normalizedValue: Record<T, DataValue>;\n    x: DataValue;\n    y: DataValue;\n};\n\nexport type GroupedCellsData<T extends string> = {\n    meta: {\n        valueSources: T[]; // dataSource for heatmap, color and size for bubble - main data for every cell\n\n        facetKeys: string[];\n        xGroupKeys: string[];\n        yGroupKeys: string[];\n\n        xKeys: string[];\n        yKeys: string[];\n        xKeysByGroups: Record<string, string[]>;\n        yKeysByGroups: Record<string, string[]>;\n\n        // for titles, if facet by more 1 columns title has several values separated by commas\n        facetKeyValues: Record<string, string[]>;\n        xGroupKeyValues: Record<string, string[]>;\n        yGroupKeyValues: Record<string, string[]>;\n\n        xLabels: Record<string, string>;\n        yLabels: Record<string, string>;\n        xGroupLabels: Record<string, string>;\n        yGroupLabels: Record<string, string>;\n\n        valueExtent: Record<T, [number, number]>; // for color/size scales\n        // data for labels, annotations and dendrograms\n        xDataByKeys: Record<string, Record<string, DataValue>>;\n        yDataByKeys: Record<string, Record<string, DataValue>>;\n    };\n    //facet groups\n    facets: Record<\n        string,\n        {\n            // axis keys\n            xKeys: string[];\n            yKeys: string[];\n            // axis keys grouped by group keys from meta\n            xKeysByGroups: Record<string, string[]>;\n            yKeysByGroups: Record<string, string[]>;\n            // cells grouped by X, then by Y\n            cells: Record<string, Record<string, Cell<T>>>;\n        }\n    >;\n};\n\nfunction normalizeByStd(values: number[]) {\n    const stdValue = deviation(values);\n    const meanValue = mean(values);\n\n    if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values: number[]) {\n    const meanValue = mean(values);\n    const [min, max] = extent(values);\n    if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method: NormalizationMethod, values: number[]) {\n    if (method === 'standardScaling') {\n        return normalizeByStd(values);\n    }\n    if (method === 'meanNormalization') {\n        return normalizeByMinMax(values);\n    }\n    return (v: number) => v;\n}\n\nfunction aggregateNumeric(method: AggregationMethod, values: number[]) {\n    switch (method) {\n        case 'max': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.max(res, v);\n            }\n            return res;\n        }\n        case 'min': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.min(res, v);\n            }\n            return res;\n        }\n        case 'median': {\n            const valuesSorted = values.sort((a, b) => a - b);\n            return quantileSorted(valuesSorted, 0.5) as number;\n        }\n        case 'mean': {\n            return mean(values) ?? values[0];\n        }\n        case 'sum': {\n            return sum(values) as number;\n        }\n        default: exhaustive(method, `Unknown aggregation function ${method}`);\n    }\n}\nfunction aggregateString(values: string[]) {\n    const list = [...new Set(values)].sort();\n    if (list.length > 3) {\n        return [...list.slice(0, 3), '...'].join(', ');\n    }\n    return list.join(', ');\n}\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n    if (!keysLists.length) {\n        return [];\n    }\n    let result: string[][] = [[]];\n    keysLists.forEach(keys => {\n        const nextResult: string[][] = [];\n        keys.forEach(key => {\n            nextResult.push(...result.map(resultItem => [...resultItem, key]));\n        });\n        result = nextResult;\n    });\n    return result;\n}\nconst sortByLabels = (arr: string[], direction: 'asc' | 'desc', labels: Record<string, string> = {}) => {\n    return arr.sort((a, b) => direction === 'asc'\n        ? (labels[a] ?? a).localeCompare((labels[b] ?? b), 'en', { numeric: true })\n        : (labels[b] ?? b).localeCompare((labels[a] ?? a), 'en', { numeric: true })\n    );\n};\nfunction applyAggregation<T extends string>(\n    result: GroupedCellsData<T>,\n    aggregation: HeatmapSettingsImpl['aggregation'],\n    additionalDataColumnsX: string[],\n    additionalDataColumnsY: string[],\n    annotations: HeatmapSettingsImpl['annotations']\n) {\n    if (aggregation.x || aggregation.y) {\n        const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n            r[key] = [Infinity, -Infinity] as [number, number];\n            return r;\n        }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells, xKeysByGroups, yKeysByGroups } = result.facets[facetKey];\n            const xGroups = aggregation.x ? xKeysByGroups : xKeys.reduce((res, xKey) => { res[xKey] = [xKey]; return res; }, {} as Record<string, string[]>);\n            const yGroups = aggregation.y ? yKeysByGroups : yKeys.reduce((res, yKey) => { res[yKey] = [yKey]; return res; }, {} as Record<string, string[]>);\n            const xNewKeys = Object.keys(xGroups);\n            const yNewKeys = Object.keys(yGroups);\n\n            for (const xGroupKey of xNewKeys) {\n                for (const yGroupKey of yNewKeys) {\n                    // collect values for aggregation to arrays\n                    const valuesBySources: Record<T, number[]> = result.meta.valueSources.reduce((r, v) => {\n                        r[v] = [];\n                        return r;\n                    }, {} as Record<T, number[]>);\n                    xGroups[xGroupKey].forEach((xKey) => {\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            for (const valueSource of result.meta.valueSources) {\n                                const cellValue = cells[xKey]?.[yKey]?.value?.[valueSource];\n                                if (cellValue !== undefined) {\n                                    valuesBySources[valueSource].push(cellValue as number);\n                                }\n                            }\n                            delete cells[xKey]?.[yKey];\n                        });\n                    });\n                    // create new cells with aggregated values\n                    for (const valueSource of result.meta.valueSources) {\n                        const values = valuesBySources[valueSource];\n                        if (values.length > 0) {\n                            const value = aggregateNumeric(aggregation.method, values);\n                            if (!result.facets[facetKey].cells[xGroupKey]) {\n                                result.facets[facetKey].cells[xGroupKey] = {};\n                            }\n                            if (!result.facets[facetKey].cells[xGroupKey][yGroupKey]) {\n                                result.facets[facetKey].cells[xGroupKey][yGroupKey] = {\n                                    isCell: true,\n                                    idx: 0,\n                                    id: `${xGroupKey}_${yGroupKey}`,\n                                    x: xGroupKey,\n                                    y: yGroupKey,\n                                    value: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n                                    normalizedValue: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n                                };\n                            }\n                            const cell = result.facets[facetKey].cells[xGroupKey][yGroupKey];\n                            cell.value[valueSource] = value;\n                            cell.normalizedValue[valueSource] = value;\n\n                            valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n                            valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n                        }\n                    }\n                }\n            }\n            // add aggregated values for X annotations\n            if (aggregation.x) {\n                xNewKeys.forEach(xGroupKey => {\n                    additionalDataColumnsX.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        xGroups[xGroupKey].forEach((xKey) => {\n                            values.push(result.meta.xDataByKeys[columnKey][xKey]);\n                            delete result.meta.xDataByKeys[columnKey][xKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.xDataByKeys[columnKey][xGroupKey] = value;\n                    });\n                });\n            }\n            // add aggregated values for Y annotations\n            if (aggregation.y) {\n                additionalDataColumnsY.forEach(columnKey => {\n                    result.meta.yDataByKeys[columnKey] = {};\n                });\n                yNewKeys.forEach(yGroupKey => {\n                    additionalDataColumnsY.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            values.push(result.meta.yDataByKeys[columnKey][yKey]);\n                            delete result.meta.yDataByKeys[columnKey][yKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.yDataByKeys[columnKey][yGroupKey] = value;\n                    });\n                });\n            }\n            // erase grouping - we aggregated by them and now there is no grouping in the chart;\n            // replace axis keys with group keys - now group keys are new axis keys\n            if (aggregation.x) {\n                result.facets[facetKey].xKeys = Object.keys(xKeysByGroups);\n                result.facets[facetKey].xKeysByGroups = { 'null': result.facets[facetKey].xKeys };\n                result.meta.xLabels = result.meta.xGroupLabels;\n                result.meta.xGroupKeys = ['null'];\n                result.meta.xGroupKeyValues = { null: ['null'] };\n            }\n            if (aggregation.y) {\n                result.facets[facetKey].yKeys = Object.keys(yKeysByGroups);\n                result.facets[facetKey].yKeysByGroups = { 'null': result.facets[facetKey].yKeys };\n                result.meta.yLabels = result.meta.yGroupLabels;\n                result.meta.yGroupKeys = ['null'];\n                result.meta.yGroupKeyValues = { null: ['null'] };\n            }\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n}\n\nfunction updateValueExtent<T extends string>(result: GroupedCellsData<T>, cell: Cell<T>) {\n    for (const valueSource of result.meta.valueSources) {\n        result.meta.valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][0]);\n        result.meta.valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][1]);\n    }\n\n}\nfunction applyNormalization<T extends string>(\n    result: GroupedCellsData<T>,\n    normalizationBySources: Record<T, HeatmapSettingsImpl['normalization']>,\n) {\n    if (Object.values(normalizationBySources).length) {\n        const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n            if (normalizationBySources[key]) {\n                r[key] = [Infinity, -Infinity] as [number, number];\n            }\n            return r;\n        }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells } = result.facets[facetKey];\n\n            for (const valueSource of result.meta.valueSources) {\n                const normalization = normalizationBySources[valueSource];\n                if (!normalization) {\n                    continue;\n                }\n                const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n                const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n                const cellGetter = normalization.direction === 'row'\n                    ? (cellKey: string, groupKey: string) => cells[cellKey]?.[groupKey]\n                    : (cellKey: string, groupKey: string) => cells[groupKey]?.[cellKey];\n                groupKeys.forEach((groupKey) => {\n                    const values: number[] = [];\n                    cellKeys.forEach((cellKey) => {\n                        const v = cellGetter(cellKey, groupKey)?.value?.[valueSource];\n                        if (v !== undefined) {\n                            values.push(v as number);\n                        }\n                    });\n                    const normalize = getNormalizationFn(normalization.method, values);\n                    cellKeys.forEach((cellKey) => {\n                        const cell = cellGetter(cellKey, groupKey);\n                        if (cell !== undefined) {\n                            cell.normalizedValue[valueSource] = normalize(cell.value?.[valueSource] as number);\n                            valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n                            valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n                        }\n                    });\n                });\n            }\n\n        });\n        result.meta.valueExtent = {...result.meta.valueExtent, valueExtent};\n    }\n}\n\nexport function fillCellsData<T extends string>(\n    result: GroupedCellsData<T>,\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumns: Record<string, ColumnName>,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalizationBySource: Record<T, HeatmapSettingsImpl['normalization']>, // separated for color and size for example\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'] | BubbleSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'] | BubbleSettingsImpl['chartSettings']['yAxis'],\n    aggregation: HeatmapSettingsImpl['aggregation'],\n) {\n    const facetKeysLists = facetBy.length\n        ? facetBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const xGroupKeysLists = xGroupBy.length\n        ? xGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const yGroupKeysLists = yGroupBy.length\n        ? yGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const facetKeysCombinations = getKeysCombinations(facetKeysLists);\n    const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n    const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n    const facetKeys = facetKeysCombinations.map(getFacetOrGroupKey);\n    const xGroupKeys = xGroupKeysCombinations.map(getFacetOrGroupKey);\n    const yGroupKeys = yGroupKeysCombinations.map(getFacetOrGroupKey);\n\n    result.meta.facetKeys = facetKeys;\n    result.meta.xGroupKeys = xGroupKeys;\n    result.meta.yGroupKeys = yGroupKeys;\n\n    const facetLabels = getFacetLabels(data, facetBy, facetKeys, facetKeysCombinations);\n    result.meta.facetKeyValues = facetKeys.reduce((res: Record<string, string[]>, key) => {\n        res[key] = facetLabels[key];\n        return res;\n    }, {});\n\n    result.meta.xGroupKeyValues = xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = xGroupKeysCombinations[index];\n        return res;\n    }, {});\n    result.meta.yGroupKeyValues = yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = yGroupKeysCombinations[index];\n        return res;\n    }, {});\n\n    const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n    const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n    const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n    const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n    const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n    const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n    for (let i = 0; i < data.rowsCount; i++) {\n        const facetKey = getFacetOrGroupKey(facetBy.map(column => data.getColumnValue(column.value, i)));\n        const xGroupKey = getFacetOrGroupKey(xGroupBy.map(column => data.getColumnValue(column.value, i)));\n        const yGroupKey = getFacetOrGroupKey(yGroupBy.map(column => data.getColumnValue(column.value, i)));\n        const xGroupLabel = xGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n        const yGroupLabel = yGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n        result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n        result.meta.yGroupLabels[yGroupKey] = yGroupLabel;\n        const x = String(data.getColumnValue(xColumn.value, i));\n        const y = String(data.getColumnValue(yColumn.value, i));\n\n        const values = result.meta.valueSources.reduce((r, key) => {\n            r[key] = (data.getColumnValue(valueColumns[key].value, i) ?? NAValueAs) as number | null;\n            return r;\n        }, {} as Record<string, DataValue>);\n\n        if (x === 'null' || y === 'null' || Object.values(values).every(v => v === null)) {\n            continue;\n        }\n\n        if (!result.facets[facetKey]) {\n            result.facets[facetKey] = {\n                xKeys: [],\n                yKeys: [],\n                xKeysByGroups: {},\n                yKeysByGroups: {},\n                cells: {},\n            };\n        }\n        if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n        }\n        if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n        }\n        result.facets[facetKey].xKeys.push(x);\n        result.facets[facetKey].yKeys.push(y);\n        result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n        result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n        if (!result.facets[facetKey].cells[x]) {\n            result.facets[facetKey].cells[x] = {};\n        }\n\n        for (const valueSource of result.meta.valueSources) {\n            if (result.facets[facetKey].cells[x][y] && result.facets[facetKey].cells[x][y].value[valueSource] !== values[valueSource]) {\n                throw Error(`More than 1 value for x=${x}, y=${y}`);\n            }\n        }\n\n        const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n        if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n            throw Error(`More than 1 x-label value for x=${x}`);\n        }\n        const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n        if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n            throw Error(`More than 1 y-label value for y=${y}`);\n        }\n        result.meta.xLabels[x] = String(xLabelsSourceValue);\n        result.meta.yLabels[y] = String(yLabelsSourceValue);\n        // data for labels, annotations and dendrograms by X\n        additionalDataColumnsX.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.xDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n            }\n        });\n        // data for labels, annotations and dendrograms by Y\n        additionalDataColumnsY.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.yDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n            }\n        });\n        result.facets[facetKey].cells[x][y] = {\n            isCell: true,\n            idx: i,\n            id: `${x}_${y}`,\n            x,\n            y,\n            value: values,\n            normalizedValue: values,\n        };\n\n        updateValueExtent(result, result.facets[facetKey].cells[x][y]);\n    }\n\n    result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n    // make uniq x, y, x-group and y-group keys\n    result.meta.facetKeys.forEach(facetKey => {\n        const facet = result.facets[facetKey];\n        const uniqueXKeys = lodash.uniq(facet.xKeys);\n        const uniqueYKeys = lodash.uniq(facet.yKeys);\n        facet.xKeys = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], uniqueXKeys) : uniqueXKeys;\n        facet.yKeys = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], uniqueYKeys) : uniqueYKeys;\n        xGroupKeys.forEach(xGroupKey => {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.intersection(\n                facet.xKeys,\n                result.facets[facetKey].xKeysByGroups[xGroupKey]\n            );\n        });\n        yGroupKeys.forEach(yGroupKey => {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.intersection(\n                facet.yKeys,\n                result.facets[facetKey].yKeysByGroups[yGroupKey]\n            );\n        });\n    });\n\n    applyAggregation(result, aggregation, additionalDataColumnsX, additionalDataColumnsY, annotations);\n    applyNormalization(result, normalizationBySource);\n\n    // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n    result.meta.xKeysByGroups = result.meta.xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n        const existingXKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n        ), xAxis.sorting, result.meta.xLabels);\n        res[xGroupKey] = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], existingXKeys) : existingXKeys;\n        return res;\n    }, {});\n    result.meta.xKeys = result.meta.xGroupKeys.reduce((res: string[], xGroupKey: string) => {\n        res = res.concat(result.meta.xKeysByGroups[xGroupKey]);\n        return res;\n    }, []);\n\n    result.meta.yKeysByGroups = result.meta.yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n        const existingYKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].yKeysByGroups[yGroupKey]))\n        ), yAxis.sorting, result.meta.yLabels);\n        res[yGroupKey] = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], existingYKeys) : existingYKeys;\n        return res;\n    }, {});\n    result.meta.yKeys = result.meta.yGroupKeys.reduce((res: string[], yGroupKey: string) => {\n        res = res.concat(result.meta.yKeysByGroups[yGroupKey]);\n        return res;\n    }, []);\n\n    for (const valueSource of result.meta.valueSources) {\n        // avoid render errors on empty data\n        if (result.meta.valueExtent[valueSource][0] === Infinity) {\n            result.meta.valueExtent[valueSource][0] = 0;\n        }\n        if (result.meta.valueExtent[valueSource][1] === -Infinity) {\n            result.meta.valueExtent[valueSource][1] = 0;\n        }\n    }\n\n    return 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+{"version":3,"file":"fillCellsData.js","sources":["../../src/heatmap/fillCellsData.ts"],"sourcesContent":["import { deviation, extent, mean, quantileSorted, sum } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { AggregationMethod, ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { exhaustive } from '../utils';\nimport { getFacetOrGroupKey } from '../utils/getFacetOrGroupKey';\nimport type { BubbleSettingsImpl } from '../bubble/BubbleSettingsImpl';\nimport { getFacetLabels } from '../discrete/utils/getFacetLabels';\nimport { getFacetStringKey } from '../discrete/utils/getFacetStringKey';\n\nexport type Cell<T extends string> = {\n    isCell: true;\n    idx: number;\n    id: string;\n    value: Record<T, DataValue>;\n    normalizedValue: Record<T, DataValue>;\n    x: DataValue;\n    y: DataValue;\n};\n\nexport type GroupedCellsData<T extends string> = {\n    meta: {\n        valueSources: T[]; // dataSource for heatmap, color and size for bubble - main data for every cell\n\n        facetKeys: string[];\n        xGroupKeys: string[];\n        yGroupKeys: string[];\n\n        xKeys: string[];\n        yKeys: string[];\n        xKeysByGroups: Record<string, string[]>;\n        yKeysByGroups: Record<string, string[]>;\n\n        // for titles, if facet by more 1 columns title has several values separated by commas\n        facetKeyValues: Record<string, string[]>;\n        xGroupKeyValues: Record<string, string[]>;\n        yGroupKeyValues: Record<string, string[]>;\n\n        xLabels: Record<string, string>;\n        yLabels: Record<string, string>;\n        xGroupLabels: Record<string, string>;\n        yGroupLabels: Record<string, string>;\n\n        valueExtent: Record<T, [number, number]>; // for color/size scales\n        // data for labels, annotations and dendrograms\n        xDataByKeys: Record<string, Record<string, DataValue>>;\n        yDataByKeys: Record<string, Record<string, DataValue>>;\n    };\n    //facet groups\n    facets: Record<\n        string,\n        {\n            // axis keys\n            xKeys: string[];\n            yKeys: string[];\n            // axis keys grouped by group keys from meta\n            xKeysByGroups: Record<string, string[]>;\n            yKeysByGroups: Record<string, string[]>;\n            // cells grouped by X, then by Y\n            cells: Record<string, Record<string, Cell<T>>>;\n        }\n    >;\n};\n\nfunction normalizeByStd(values: number[]) {\n    const stdValue = deviation(values);\n    const meanValue = mean(values);\n\n    if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values: number[]) {\n    const meanValue = mean(values);\n    const [min, max] = extent(values);\n    if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method: NormalizationMethod, values: number[]) {\n    if (method === 'standardScaling') {\n        return normalizeByStd(values);\n    }\n    if (method === 'meanNormalization') {\n        return normalizeByMinMax(values);\n    }\n    return (v: number) => v;\n}\n\nfunction aggregateNumeric(method: AggregationMethod, values: number[]) {\n    switch (method) {\n        case 'max': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.max(res, v);\n            }\n            return res;\n        }\n        case 'min': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.min(res, v);\n            }\n            return res;\n        }\n        case 'median': {\n            const valuesSorted = values.sort((a, b) => a - b);\n            return quantileSorted(valuesSorted, 0.5) as number;\n        }\n        case 'mean': {\n            return mean(values) ?? values[0];\n        }\n        case 'sum': {\n            return sum(values) as number;\n        }\n        default: exhaustive(method, `Unknown aggregation function ${method}`);\n    }\n}\nfunction aggregateString(values: string[]) {\n    const list = [...new Set(values)].sort();\n    if (list.length > 3) {\n        return [...list.slice(0, 3), '...'].join(', ');\n    }\n    return list.join(', ');\n}\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n    if (!keysLists.length) {\n        return [];\n    }\n    let result: string[][] = [[]];\n    keysLists.forEach(keys => {\n        const nextResult: string[][] = [];\n        keys.forEach(key => {\n            nextResult.push(...result.map(resultItem => [...resultItem, key]));\n        });\n        result = nextResult;\n    });\n    return result;\n}\nconst sortByLabels = (arr: string[], direction: 'asc' | 'desc', labels: Record<string, string> = {}) => {\n    return arr.sort((a, b) => direction === 'asc'\n        ? (labels[a] ?? a).localeCompare((labels[b] ?? b), 'en', { numeric: true })\n        : (labels[b] ?? b).localeCompare((labels[a] ?? a), 'en', { numeric: true })\n    );\n};\nfunction applyAggregation<T extends string>(\n    result: GroupedCellsData<T>,\n    aggregation: HeatmapSettingsImpl['aggregation'],\n    additionalDataColumnsX: string[],\n    additionalDataColumnsY: string[],\n    annotations: HeatmapSettingsImpl['annotations']\n) {\n    if (aggregation.x || aggregation.y) {\n        const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n            r[key] = [Infinity, -Infinity] as [number, number];\n            return r;\n        }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells, xKeysByGroups, yKeysByGroups } = result.facets[facetKey];\n            const xGroups = aggregation.x ? xKeysByGroups : xKeys.reduce((res, xKey) => { res[xKey] = [xKey]; return res; }, {} as Record<string, string[]>);\n            const yGroups = aggregation.y ? yKeysByGroups : yKeys.reduce((res, yKey) => { res[yKey] = [yKey]; return res; }, {} as Record<string, string[]>);\n            const xNewKeys = Object.keys(xGroups);\n            const yNewKeys = Object.keys(yGroups);\n\n            for (const xGroupKey of xNewKeys) {\n                for (const yGroupKey of yNewKeys) {\n                    // collect values for aggregation to arrays\n                    const valuesBySources: Record<T, number[]> = result.meta.valueSources.reduce((r, v) => {\n                        r[v] = [];\n                        return r;\n                    }, {} as Record<T, number[]>);\n                    xGroups[xGroupKey].forEach((xKey) => {\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            for (const valueSource of result.meta.valueSources) {\n                                const cellValue = cells[xKey]?.[yKey]?.value?.[valueSource];\n                                if (cellValue !== undefined) {\n                                    valuesBySources[valueSource].push(cellValue as number);\n                                }\n                            }\n                            delete cells[xKey]?.[yKey];\n                        });\n                    });\n                    // create new cells with aggregated values\n                    for (const valueSource of result.meta.valueSources) {\n                        const values = valuesBySources[valueSource];\n                        if (values.length > 0) {\n                            const value = aggregateNumeric(aggregation.method, values);\n                            if (!result.facets[facetKey].cells[xGroupKey]) {\n                                result.facets[facetKey].cells[xGroupKey] = {};\n                            }\n                            if (!result.facets[facetKey].cells[xGroupKey][yGroupKey]) {\n                                result.facets[facetKey].cells[xGroupKey][yGroupKey] = {\n                                    isCell: true,\n                                    idx: 0,\n                                    id: `${xGroupKey}_${yGroupKey}`,\n                                    x: xGroupKey,\n                                    y: yGroupKey,\n                                    value: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n                                    normalizedValue: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n                                };\n                            }\n                            const cell = result.facets[facetKey].cells[xGroupKey][yGroupKey];\n                            cell.value[valueSource] = value;\n                            cell.normalizedValue[valueSource] = value;\n\n                            valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n                            valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n                        }\n                    }\n                }\n            }\n            // add aggregated values for X annotations\n            if (aggregation.x) {\n                xNewKeys.forEach(xGroupKey => {\n                    additionalDataColumnsX.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        xGroups[xGroupKey].forEach((xKey) => {\n                            values.push(result.meta.xDataByKeys[columnKey][xKey]);\n                            delete result.meta.xDataByKeys[columnKey][xKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.xDataByKeys[columnKey][xGroupKey] = value;\n                    });\n                });\n            }\n            // add aggregated values for Y annotations\n            if (aggregation.y) {\n                additionalDataColumnsY.forEach(columnKey => {\n                    result.meta.yDataByKeys[columnKey] = {};\n                });\n                yNewKeys.forEach(yGroupKey => {\n                    additionalDataColumnsY.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            values.push(result.meta.yDataByKeys[columnKey][yKey]);\n                            delete result.meta.yDataByKeys[columnKey][yKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.yDataByKeys[columnKey][yGroupKey] = value;\n                    });\n                });\n            }\n            // erase grouping - we aggregated by them and now there is no grouping in the chart;\n            // replace axis keys with group keys - now group keys are new axis keys\n            if (aggregation.x) {\n                result.facets[facetKey].xKeys = Object.keys(xKeysByGroups);\n                result.facets[facetKey].xKeysByGroups = { 'null': result.facets[facetKey].xKeys };\n                result.meta.xLabels = result.meta.xGroupLabels;\n                result.meta.xGroupKeys = ['null'];\n                result.meta.xGroupKeyValues = { null: ['null'] };\n            }\n            if (aggregation.y) {\n                result.facets[facetKey].yKeys = Object.keys(yKeysByGroups);\n                result.facets[facetKey].yKeysByGroups = { 'null': result.facets[facetKey].yKeys };\n                result.meta.yLabels = result.meta.yGroupLabels;\n                result.meta.yGroupKeys = ['null'];\n                result.meta.yGroupKeyValues = { null: ['null'] };\n            }\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n}\n\nfunction updateValueExtent<T extends string>(result: GroupedCellsData<T>, cell: Cell<T>) {\n    for (const valueSource of result.meta.valueSources) {\n        result.meta.valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][0]);\n        result.meta.valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][1]);\n    }\n\n}\nfunction applyNormalization<T extends string>(\n    result: GroupedCellsData<T>,\n    normalizationBySources: Record<T, HeatmapSettingsImpl['normalization']>,\n) {\n    if (Object.values(normalizationBySources).length) {\n        const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n            if (normalizationBySources[key]) {\n                r[key] = [Infinity, -Infinity] as [number, number];\n            }\n            return r;\n        }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells } = result.facets[facetKey];\n\n            for (const valueSource of result.meta.valueSources) {\n                const normalization = normalizationBySources[valueSource];\n                if (!normalization) {\n                    continue;\n                }\n                const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n                const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n                const cellGetter = normalization.direction === 'row'\n                    ? (cellKey: string, groupKey: string) => cells[cellKey]?.[groupKey]\n                    : (cellKey: string, groupKey: string) => cells[groupKey]?.[cellKey];\n                groupKeys.forEach((groupKey) => {\n                    const values: number[] = [];\n                    cellKeys.forEach((cellKey) => {\n                        const v = cellGetter(cellKey, groupKey)?.value?.[valueSource];\n                        if (v !== undefined) {\n                            values.push(v as number);\n                        }\n                    });\n                    const normalize = getNormalizationFn(normalization.method, values);\n                    cellKeys.forEach((cellKey) => {\n                        const cell = cellGetter(cellKey, groupKey);\n                        if (cell !== undefined) {\n                            cell.normalizedValue[valueSource] = normalize(cell.value?.[valueSource] as number);\n                            valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n                            valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n                        }\n                    });\n                });\n            }\n\n        });\n        result.meta.valueExtent = {...result.meta.valueExtent, valueExtent};\n    }\n}\n\nexport function fillCellsData<T extends string>(\n    result: GroupedCellsData<T>,\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumns: Record<string, ColumnName>,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    facetSettings: HeatmapSettingsImpl['facetSettings'],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalizationBySource: Record<T, HeatmapSettingsImpl['normalization']>, // separated for color and size for example\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'] | BubbleSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'] | BubbleSettingsImpl['chartSettings']['yAxis'],\n    aggregation: HeatmapSettingsImpl['aggregation'],\n) {\n    const facetKeysLists = facetBy.length\n        ? facetBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n\n    const xGroupKeysLists = xGroupBy.length\n        ? xGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const yGroupKeysLists = yGroupBy.length\n        ? yGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    let facetKeysCombinations = getKeysCombinations(facetKeysLists);\n    const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n    const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n    if (facetSettings?.order?.length) {\n        facetKeysCombinations = facetKeysCombinations.filter(keys => facetSettings.order?.includes(getFacetStringKey(keys)));\n    }\n    const facetKeys = facetKeysCombinations.map(getFacetOrGroupKey);\n    const facetKeysSet = new Set(facetKeys);\n    const xGroupKeys = xGroupKeysCombinations.map(getFacetOrGroupKey);\n    const yGroupKeys = yGroupKeysCombinations.map(getFacetOrGroupKey);\n\n    result.meta.facetKeys = facetKeys;\n    result.meta.xGroupKeys = xGroupKeys;\n    result.meta.yGroupKeys = yGroupKeys;\n\n    const facetLabels = getFacetLabels(data, facetBy, facetKeys, facetKeysCombinations);\n    result.meta.facetKeyValues = facetKeys.reduce((res: Record<string, string[]>, key) => {\n        res[key] = facetLabels[key];\n        return res;\n    }, {});\n\n    result.meta.xGroupKeyValues = xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = xGroupKeysCombinations[index];\n        return res;\n    }, {});\n    result.meta.yGroupKeyValues = yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = yGroupKeysCombinations[index];\n        return res;\n    }, {});\n\n    const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n    const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n    const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n    const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n    const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n    const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n    for (let i = 0; i < data.rowsCount; i++) {\n        const facetKey = getFacetOrGroupKey(facetBy.map(column => data.getColumnValue(column.value, i)));\n        if (!facetKeysSet.has(facetKey)) {\n            continue;\n        }\n        const xGroupKey = getFacetOrGroupKey(xGroupBy.map(column => data.getColumnValue(column.value, i)));\n        const yGroupKey = getFacetOrGroupKey(yGroupBy.map(column => data.getColumnValue(column.value, i)));\n        const xGroupLabel = xGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n        const yGroupLabel = yGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n        result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n        result.meta.yGroupLabels[yGroupKey] = yGroupLabel;\n        const x = String(data.getColumnValue(xColumn.value, i));\n        const y = String(data.getColumnValue(yColumn.value, i));\n\n        const values = result.meta.valueSources.reduce((r, key) => {\n            r[key] = (data.getColumnValue(valueColumns[key].value, i) ?? NAValueAs) as number | null;\n            return r;\n        }, {} as Record<string, DataValue>);\n\n        if (x === 'null' || y === 'null' || Object.values(values).every(v => v === null)) {\n            continue;\n        }\n\n        if (!result.facets[facetKey]) {\n            result.facets[facetKey] = {\n                xKeys: [],\n                yKeys: [],\n                xKeysByGroups: {},\n                yKeysByGroups: {},\n                cells: {},\n            };\n        }\n        if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n        }\n        if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n        }\n        result.facets[facetKey].xKeys.push(x);\n        result.facets[facetKey].yKeys.push(y);\n        result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n        result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n        if (!result.facets[facetKey].cells[x]) {\n            result.facets[facetKey].cells[x] = {};\n        }\n\n        for (const valueSource of result.meta.valueSources) {\n            if (result.facets[facetKey].cells[x][y] && result.facets[facetKey].cells[x][y].value[valueSource] !== values[valueSource]) {\n                throw Error(`More than 1 value for x=${x}, y=${y}`);\n            }\n        }\n\n        const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n        if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n            throw Error(`More than 1 x-label value for x=${x}`);\n        }\n        const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n        if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n            throw Error(`More than 1 y-label value for y=${y}`);\n        }\n        result.meta.xLabels[x] = String(xLabelsSourceValue);\n        result.meta.yLabels[y] = String(yLabelsSourceValue);\n        // data for labels, annotations and dendrograms by X\n        additionalDataColumnsX.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.xDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n            }\n        });\n        // data for labels, annotations and dendrograms by Y\n        additionalDataColumnsY.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.yDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n            }\n        });\n        result.facets[facetKey].cells[x][y] = {\n            isCell: true,\n            idx: i,\n            id: `${x}_${y}`,\n            x,\n            y,\n            value: values,\n            normalizedValue: values,\n        };\n\n        updateValueExtent(result, result.facets[facetKey].cells[x][y]);\n    }\n\n    result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n    // make uniq x, y, x-group and y-group keys\n    result.meta.facetKeys.forEach(facetKey => {\n        const facet = result.facets[facetKey];\n        const uniqueXKeys = lodash.uniq(facet.xKeys);\n        const uniqueYKeys = lodash.uniq(facet.yKeys);\n        facet.xKeys = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], uniqueXKeys) : uniqueXKeys;\n        facet.yKeys = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], uniqueYKeys) : uniqueYKeys;\n        xGroupKeys.forEach(xGroupKey => {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.intersection(\n                facet.xKeys,\n                result.facets[facetKey].xKeysByGroups[xGroupKey]\n            );\n        });\n        yGroupKeys.forEach(yGroupKey => {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.intersection(\n                facet.yKeys,\n                result.facets[facetKey].yKeysByGroups[yGroupKey]\n            );\n        });\n    });\n\n    applyAggregation(result, aggregation, additionalDataColumnsX, additionalDataColumnsY, annotations);\n    applyNormalization(result, normalizationBySource);\n\n    // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n    result.meta.xKeysByGroups = result.meta.xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n        const existingXKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n        ), xAxis.sorting, result.meta.xLabels);\n        res[xGroupKey] = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], existingXKeys) : existingXKeys;\n        return res;\n    }, {});\n    result.meta.xKeys = result.meta.xGroupKeys.reduce((res: string[], xGroupKey: string) => {\n        res = res.concat(result.meta.xKeysByGroups[xGroupKey]);\n        return res;\n    }, []);\n\n    result.meta.yKeysByGroups = result.meta.yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n        const existingYKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].yKeysByGroups[yGroupKey]))\n        ), yAxis.sorting, result.meta.yLabels);\n        res[yGroupKey] = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], existingYKeys) : existingYKeys;\n        return res;\n    }, {});\n    result.meta.yKeys = result.meta.yGroupKeys.reduce((res: string[], yGroupKey: string) => {\n        res = res.concat(result.meta.yKeysByGroups[yGroupKey]);\n        return res;\n    }, []);\n\n    for (const valueSource of result.meta.valueSources) {\n        // avoid render errors on empty data\n        if (result.meta.valueExtent[valueSource][0] === Infinity) {\n            result.meta.valueExtent[valueSource][0] = 0;\n        }\n        if (result.meta.valueExtent[valueSource][1] === -Infinity) {\n            result.meta.valueExtent[valueSource][1] = 0;\n        }\n    }\n\n    result.meta.xLabels['null'] = xColumn.nullValueLabel ?? 'NA';\n    result.meta.yLabels['null'] = yColumn.nullValueLabel ?? 'NA';\n    result.meta.xGroupLabels['null'] = xGroupBy.map(column => column.nullValueLabel ?? 'NA').join(', ');\n    result.meta.yGroupLabels['null'] = yGroupBy.map(column => column.nullValueLabel ?? 'NA').join(', ');\n    return 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package/dist/heatmap/getCells.d.ts

@@ -4,4 +4,5 @@ import { HeatmapSettingsImpl } from './HeatmapSettingsImpl';
 import { Cell, GroupedCellsData } from './fillCellsData';
 export type CellHeatmap = Cell<'dataSource'>;
 export type GroupedCellsHeatmap = GroupedCellsData<'dataSource'>;
-export declare function getCells(data: DataFrame, xColumn: ColumnName, yColumn: ColumnName, valueColumns: Record<string, ColumnName>, facetBy: ColumnName[], xGroupBy: ColumnName[], yGroupBy: ColumnName[], annotations: HeatmapSettingsImpl['annotations'], dendrogramX: HeatmapSettingsImpl['dendrogramX'], dendrogramY: HeatmapSettingsImpl['dendrogramY'], normalization: HeatmapSettingsImpl['normalization'], NAValueAs: HeatmapSettingsImpl['NAValueAs'], keysOrder: HeatmapSettingsImpl['keysOrder'], xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'], yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'], aggregation: HeatmapSettingsImpl['aggregation']): GroupedCellsHeatmap;
+export declare function getCells(data: DataFrame, xColumn: ColumnName, yColumn: ColumnName, valueColumns: Record<string, ColumnName>, facetBy: ColumnName[], xGroupBy: ColumnName[], yGroupBy: ColumnName[], facetSettings: HeatmapSettingsImpl['facetSettings'], annotations: HeatmapSettingsImpl['annotations'], dendrogramX: HeatmapSettingsImpl['dendrogramX'], dendrogramY: HeatmapSettingsImpl['dendrogramY'], normalization: HeatmapSettingsImpl['normalization'], NAValueAs: HeatmapSettingsImpl['NAValueAs'], keysOrder: HeatmapSettingsImpl['keysOrder'], xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'], yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'], aggregation: HeatmapSettingsImpl['aggregation']): GroupedCellsHeatmap;
+//# sourceMappingURL=getCells.d.ts.map

package/dist/heatmap/getCells.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"getCells.d.ts","sourceRoot":"","sources":["../../src/heatmap/getCells.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,cAAc,CAAC;AAC9C,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AAC3C,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,uBAAuB,CAAC;AACjE,OAAO,KAAK,EAAE,IAAI,EAAE,gBAAgB,EAAE,MAAM,iBAAiB,CAAC;AAG9D,MAAM,MAAM,WAAW,GAAG,IAAI,CAAC,YAAY,CAAC,CAAA;AAC5C,MAAM,MAAM,mBAAmB,GAAG,gBAAgB,CAAC,YAAY,CAAC,CAAC;AA4BjE,wBAAgB,QAAQ,CACpB,IAAI,EAAE,SAAS,EACf,OAAO,EAAE,UAAU,EACnB,OAAO,EAAE,UAAU,EACnB,YAAY,EAAE,MAAM,CAAC,MAAM,EAAE,UAAU,CAAC,EACxC,OAAO,EAAE,UAAU,EAAE,EACrB,QAAQ,EAAE,UAAU,EAAE,EACtB,QAAQ,EAAE,UAAU,EAAE,EACtB,aAAa,EAAE,mBAAmB,CAAC,eAAe,CAAC,EACnD,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,aAAa,EAAE,mBAAmB,CAAC,eAAe,CAAC,EACnD,SAAS,EAAE,mBAAmB,CAAC,WAAW,CAAC,EAC3C,SAAS,EAAE,mBAAmB,CAAC,WAAW,CAAC,EAC3C,KAAK,EAAE,mBAAmB,CAAC,eAAe,CAAC,CAAC,OAAO,CAAC,EACpD,KAAK,EAAE,mBAAmB,CAAC,eAAe,CAAC,CAAC,OAAO,CAAC,EACpD,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,GAChD,mBAAmB,CAkBrB"}

package/dist/heatmap/getCells.js

@@ -1,5 +1,5 @@
-import { fillCellsData as b } from "./fillCellsData.js";
-function d() {
+import { fillCellsData as d } from "./fillCellsData.js";
+function m() {
   return {
     meta: {
       valueSources: ["dataSource"],
@@ -24,9 +24,9 @@ function d() {
     facets: {}
   };
 }
-function B(a, y, s, t, u, r, o, l, n, p, K, c, f, x, G, i) {
-  const e = d();
-  return b(
+function L(a, y, s, t, u, r, o, l, n, p, K, c, f, x, G, i, b) {
+  const e = m();
+  return d(
     e,
     a,
     y,
@@ -38,15 +38,16 @@ function B(a, y, s, t, u, r, o, l, n, p, K, c, f, x, G, i) {
     l,
     n,
     p,
-    { dataSource: K },
-    c,
+    K,
+    { dataSource: c },
     f,
     x,
     G,
-    i
+    i,
+    b
   ), e;
 }
 export {
-  B as getCells
+  L as getCells
 };
 //# sourceMappingURL=getCells.js.map

package/dist/heatmap/getCells.js.map

@@ -1 +1 @@
-{"version":3,"file":"getCells.js","sources":["../../src/heatmap/getCells.ts"],"sourcesContent":["import type { DataFrame } from '../DataFrame';\nimport type { ColumnName } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport type { Cell, GroupedCellsData } from './fillCellsData';\nimport { fillCellsData } from './fillCellsData';\n\nexport type CellHeatmap = Cell<'dataSource'>\nexport type GroupedCellsHeatmap = GroupedCellsData<'dataSource'>;\n\nfunction createEmptyGroupedCells(): GroupedCellsHeatmap {\n    return {\n        meta: {\n            valueSources: ['dataSource'],\n            facetKeys: [],\n            xKeys: [],\n            yKeys: [],\n            xGroupKeys: [],\n            yGroupKeys: [],\n            xKeysByGroups: {},\n            yKeysByGroups: {},\n            xLabels: {},\n            yLabels: {},\n            xGroupLabels: {},\n            yGroupLabels: {},\n            xDataByKeys: {},\n            yDataByKeys: {},\n            facetKeyValues: {},\n            xGroupKeyValues: {},\n            yGroupKeyValues: {},\n            valueExtent: { dataSource: [Infinity, -Infinity] },\n        },\n        facets: {},\n    };\n}\n\nexport function getCells(\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumns: Record<string, ColumnName>,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalization: HeatmapSettingsImpl['normalization'],\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'],\n    aggregation: HeatmapSettingsImpl['aggregation'],\n): GroupedCellsHeatmap {\n    const result: GroupedCellsHeatmap = createEmptyGroupedCells();\n    fillCellsData(\n        result,\n        data,\n        xColumn, yColumn, valueColumns,\n        facetBy, xGroupBy, yGroupBy,\n        annotations,\n        dendrogramX, dendrogramY,\n        {dataSource: normalization},\n        NAValueAs,\n        keysOrder,\n        xAxis,\n        yAxis,\n        aggregation\n    );\n    return result;\n}\n"],"names":["createEmptyGroupedCells","getCells","data","xColumn","yColumn","valueColumns","facetBy","xGroupBy","yGroupBy","annotations","dendrogramX","dendrogramY","normalization","NAValueAs","keysOrder","xAxis","yAxis","aggregation","result","fillCellsData"],"mappings":";AASA,SAASA,IAA+C;AACpD,SAAO;AAAA,IACH,MAAM;AAAA,MACF,cAAc,CAAC,YAAY;AAAA,MAC3B,WAAW,CAAA;AAAA,MACX,OAAO,CAAA;AAAA,MACP,OAAO,CAAA;AAAA,MACP,YAAY,CAAA;AAAA,MACZ,YAAY,CAAA;AAAA,MACZ,eAAe,CAAA;AAAA,MACf,eAAe,CAAA;AAAA,MACf,SAAS,CAAA;AAAA,MACT,SAAS,CAAA;AAAA,MACT,cAAc,CAAA;AAAA,MACd,cAAc,CAAA;AAAA,MACd,aAAa,CAAA;AAAA,MACb,aAAa,CAAA;AAAA,MACb,gBAAgB,CAAA;AAAA,MAChB,iBAAiB,CAAA;AAAA,MACjB,iBAAiB,CAAA;AAAA,MACjB,aAAa,EAAE,YAAY,CAAC,OAAU,MAAS,EAAA;AAAA,IAAE;AAAA,IAErD,QAAQ,CAAA;AAAA,EAAC;AAEjB;AAEO,SAASC,EACZC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACmB;AACnB,QAAMC,IAA8BlB,EAAA;AACpC,SAAAmB;AAAA,IACID;AAAA,IACAhB;AAAA,IACAC;AAAA,IAASC;AAAA,IAASC;AAAA,IAClBC;AAAA,IAASC;AAAA,IAAUC;AAAA,IACnBC;AAAA,IACAC;AAAA,IAAaC;AAAA,IACb,EAAC,YAAYC,EAAA;AAAA,IACbC;AAAA,IACAC;AAAA,IACAC;AAAA,IACAC;AAAA,IACAC;AAAA,EAAA,GAEGC;AACX;"}
+{"version":3,"file":"getCells.js","sources":["../../src/heatmap/getCells.ts"],"sourcesContent":["import type { DataFrame } from '../DataFrame';\nimport type { ColumnName } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport type { Cell, GroupedCellsData } from './fillCellsData';\nimport { fillCellsData } from './fillCellsData';\n\nexport type CellHeatmap = Cell<'dataSource'>\nexport type GroupedCellsHeatmap = GroupedCellsData<'dataSource'>;\n\nfunction createEmptyGroupedCells(): GroupedCellsHeatmap {\n    return {\n        meta: {\n            valueSources: ['dataSource'],\n            facetKeys: [],\n            xKeys: [],\n            yKeys: [],\n            xGroupKeys: [],\n            yGroupKeys: [],\n            xKeysByGroups: {},\n            yKeysByGroups: {},\n            xLabels: {},\n            yLabels: {},\n            xGroupLabels: {},\n            yGroupLabels: {},\n            xDataByKeys: {},\n            yDataByKeys: {},\n            facetKeyValues: {},\n            xGroupKeyValues: {},\n            yGroupKeyValues: {},\n            valueExtent: { dataSource: [Infinity, -Infinity] },\n        },\n        facets: {},\n    };\n}\n\nexport function getCells(\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumns: Record<string, ColumnName>,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    facetSettings: HeatmapSettingsImpl['facetSettings'],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalization: HeatmapSettingsImpl['normalization'],\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'],\n    aggregation: HeatmapSettingsImpl['aggregation'],\n): GroupedCellsHeatmap {\n    const result: GroupedCellsHeatmap = createEmptyGroupedCells();\n    fillCellsData(\n        result,\n        data,\n        xColumn, yColumn, valueColumns,\n        facetBy, xGroupBy, yGroupBy,\n        facetSettings,\n        annotations,\n        dendrogramX, dendrogramY,\n        {dataSource: normalization},\n        NAValueAs,\n        keysOrder,\n        xAxis,\n        yAxis,\n        aggregation\n    );\n    return result;\n}\n"],"names":["createEmptyGroupedCells","getCells","data","xColumn","yColumn","valueColumns","facetBy","xGroupBy","yGroupBy","facetSettings","annotations","dendrogramX","dendrogramY","normalization","NAValueAs","keysOrder","xAxis","yAxis","aggregation","result","fillCellsData"],"mappings":";AASA,SAASA,IAA+C;AACpD,SAAO;AAAA,IACH,MAAM;AAAA,MACF,cAAc,CAAC,YAAY;AAAA,MAC3B,WAAW,CAAA;AAAA,MACX,OAAO,CAAA;AAAA,MACP,OAAO,CAAA;AAAA,MACP,YAAY,CAAA;AAAA,MACZ,YAAY,CAAA;AAAA,MACZ,eAAe,CAAA;AAAA,MACf,eAAe,CAAA;AAAA,MACf,SAAS,CAAA;AAAA,MACT,SAAS,CAAA;AAAA,MACT,cAAc,CAAA;AAAA,MACd,cAAc,CAAA;AAAA,MACd,aAAa,CAAA;AAAA,MACb,aAAa,CAAA;AAAA,MACb,gBAAgB,CAAA;AAAA,MAChB,iBAAiB,CAAA;AAAA,MACjB,iBAAiB,CAAA;AAAA,MACjB,aAAa,EAAE,YAAY,CAAC,OAAU,MAAS,EAAA;AAAA,IAAE;AAAA,IAErD,QAAQ,CAAA;AAAA,EAAC;AAEjB;AAEO,SAASC,EACZC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACmB;AACnB,QAAMC,IAA8BnB,EAAA;AACpC,SAAAoB;AAAA,IACID;AAAA,IACAjB;AAAA,IACAC;AAAA,IAASC;AAAA,IAASC;AAAA,IAClBC;AAAA,IAASC;AAAA,IAAUC;AAAA,IACnBC;AAAA,IACAC;AAAA,IACAC;AAAA,IAAaC;AAAA,IACb,EAAC,YAAYC,EAAA;AAAA,IACbC;AAAA,IACAC;AAAA,IACAC;AAAA,IACAC;AAAA,IACAC;AAAA,EAAA,GAEGC;AACX;"}

package/dist/heatmap/getClusters.d.ts

@@ -83,3 +83,4 @@ export declare function getClustersApproximate(dataValues: number[][], distanceT
  * @returns Root cluster containing the complete hierarchy
  */
 export declare function getClusters(dataValues: number[][], distanceType?: DendrogramDistance, linkageType?: DendrogramLinkage): Cluster;
+//# sourceMappingURL=getClusters.d.ts.map

package/dist/heatmap/getClusters.d.ts.map

@@ -0,0 +1 @@
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package/dist/heatmap/getDendrograms.d.ts

@@ -7,3 +7,4 @@ export type DendrogramsData = Record<string, {
     hierarchyByGroupY: Record<string, HierarchyNode<Cluster>>;
 }>;
 export declare function getDendrograms(groupedCellsData: GroupedCellsHeatmap, dendrogramX: HeatmapSettingsImpl['dendrogramX'], dendrogramY: HeatmapSettingsImpl['dendrogramY']): Promise<DendrogramsData>;
+//# sourceMappingURL=getDendrograms.d.ts.map

package/dist/heatmap/getDendrograms.d.ts.map

@@ -0,0 +1 @@
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package/dist/heatmap/index.d.ts

@@ -28,3 +28,4 @@ export declare class ChartHeatmap extends AbstractChart {
     _updateAesInData(): void;
     _updateChart(): void;
 }
+//# sourceMappingURL=index.d.ts.map

package/dist/heatmap/index.d.ts.map

@@ -0,0 +1 @@
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