@milaboratories/miplots4 1.0.151 → 1.0.152

package/dist/heatmap/fillCellsData.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"fillCellsData.js","sources":["../../src/heatmap/fillCellsData.ts"],"sourcesContent":["import { deviation, extent, mean, quantileSorted } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { AggregationMethod, ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { exhaustive } from '../utils';\nimport { getFacetOrGroupKey } from '../utils/getFacetOrGroupKey';\nimport type { BubbleSettingsImpl } from '../bubble/BubbleSettingsImpl';\n\nexport type Cell<T extends string> = {\n    isCell: true;\n    idx: number;\n    id: string;\n    value: Record<T, DataValue>;\n    normalizedValue: Record<T, DataValue>;\n    x: DataValue;\n    y: DataValue;\n};\n\nexport type GroupedCellsData<T extends string> = {\n    meta: {\n        valueSources: T[]; // dataSource for heatmap, color and size for bubble - main data for every cell\n\n        facetKeys: string[];\n        xGroupKeys: string[];\n        yGroupKeys: string[];\n\n        xKeys: string[];\n        yKeys: string[];\n        xKeysByGroups: Record<string, string[]>;\n        yKeysByGroups: Record<string, string[]>;\n\n        // for titles, if facet by more 1 columns title has several values separated by commas\n        facetKeyValues: Record<string, string[]>;\n        xGroupKeyValues: Record<string, string[]>;\n        yGroupKeyValues: Record<string, string[]>;\n\n        xLabels: Record<string, string>;\n        yLabels: Record<string, string>;\n        xGroupLabels: Record<string, string>;\n        yGroupLabels: Record<string, string>;\n\n        valueExtent: Record<T, [number, number]>; // for color/size scales\n        // data for labels, annotations and dendrograms\n        xDataByKeys: Record<string, Record<string, DataValue>>;\n        yDataByKeys: Record<string, Record<string, DataValue>>;\n    };\n    //facet groups\n    facets: Record<\n        string,\n        {\n            // axis keys\n            xKeys: string[];\n            yKeys: string[];\n            // axis keys grouped by group keys from meta\n            xKeysByGroups: Record<string, string[]>;\n            yKeysByGroups: Record<string, string[]>;\n            // cells grouped by X, then by Y\n            cells: Record<string, Record<string, Cell<T>>>;\n        }\n    >;\n};\n\nfunction normalizeByStd(values: number[]) {\n    const stdValue = deviation(values);\n    const meanValue = mean(values);\n\n    if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values: number[]) {\n    const meanValue = mean(values);\n    const [min, max] = extent(values);\n    if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method: NormalizationMethod, values: number[]) {\n    if (method === 'standardScaling') {\n        return normalizeByStd(values);\n    }\n    if (method === 'meanNormalization') {\n        return normalizeByMinMax(values);\n    }\n    return (v: number) => v;\n}\n\nfunction aggregateNumeric(method: AggregationMethod, values: number[]) {\n    switch (method) {\n        case 'max': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.max(res, v);\n            }\n            return res;\n        }\n        case 'min': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.min(res, v);\n            }\n            return res;\n        }\n        case 'median': {\n            const valuesSorted = values.sort((a, b) => a - b);\n            return quantileSorted(valuesSorted, 0.5) as number;\n        }\n        case 'mean': {\n            return mean(values) ?? values[0];\n        }\n        default: exhaustive(method, `Unknown aggregation function ${method}`);\n    }\n}\nfunction aggregateString(values: string[]) {\n    const list = [...new Set(values)].sort();\n    if (list.length > 3) {\n        return [...list.slice(0, 3), '...'].join(', ');\n    }\n    return list.join(', ');\n}\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n    if (!keysLists.length) {\n        return [];\n    }\n    let result: string[][] = [[]];\n    keysLists.forEach(keys => {\n        const nextResult: string[][] = [];\n        keys.forEach(key => {\n            nextResult.push(...result.map(resultItem => [...resultItem, key]));\n        });\n        result = nextResult;\n    });\n    return result;\n}\nconst sortByLabels = (arr: string[], direction: 'asc' | 'desc', labels: Record<string, string> = {}) => {\n    return arr.sort((a, b) => direction === 'asc'\n        ? (labels[a] ?? a).localeCompare((labels[b] ?? b), 'en', { numeric: true })\n        : (labels[b] ?? b).localeCompare((labels[a] ?? a), 'en', { numeric: true })\n    );\n};\nfunction applyAggregation<T extends string>(\n    result: GroupedCellsData<T>,\n    aggregation: HeatmapSettingsImpl['aggregation'],\n    additionalDataColumnsX: string[],\n    additionalDataColumnsY: string[],\n    annotations: HeatmapSettingsImpl['annotations']\n) {\n    if (aggregation.x || aggregation.y) {\n        const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n            r[key] = [Infinity, -Infinity] as [number, number];\n            return r;\n        }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells, xKeysByGroups, yKeysByGroups } = result.facets[facetKey];\n            const xGroups = aggregation.x ? xKeysByGroups : xKeys.reduce((res, xKey) => { res[xKey] = [xKey]; return res; }, {} as Record<string, string[]>);\n            const yGroups = aggregation.y ? yKeysByGroups : yKeys.reduce((res, yKey) => { res[yKey] = [yKey]; return res; }, {} as Record<string, string[]>);\n            const xNewKeys = Object.keys(xGroups);\n            const yNewKeys = Object.keys(yGroups);\n\n            for (const xGroupKey of xNewKeys) {\n                for (const yGroupKey of yNewKeys) {\n                    // collect values for aggregation to arrays\n                    const valuesBySources: Record<T, number[]> = result.meta.valueSources.reduce((r, v) => {\n                        r[v] = [];\n                        return r;\n                    }, {} as Record<T, number[]>);\n                    xGroups[xGroupKey].forEach((xKey) => {\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            for (const valueSource of result.meta.valueSources) {\n                                const cellValue = cells[xKey]?.[yKey]?.value?.[valueSource];\n                                if (cellValue !== undefined) {\n                                    valuesBySources[valueSource].push(cellValue as number);\n                                }\n                            }\n                            delete cells[xKey]?.[yKey];\n                        });\n                    });\n                    // create new cells with aggregated values\n                    for (const valueSource of result.meta.valueSources) {\n                        const values = valuesBySources[valueSource];\n                        if (values.length > 0) {\n                            const value = aggregateNumeric(aggregation.method, values);\n                            if (!result.facets[facetKey].cells[xGroupKey]) {\n                                result.facets[facetKey].cells[xGroupKey] = {};\n                            }\n                            if (!result.facets[facetKey].cells[xGroupKey][yGroupKey]) {\n                                result.facets[facetKey].cells[xGroupKey][yGroupKey] = {\n                                    isCell: true,\n                                    idx: 0,\n                                    id: `${xGroupKey}_${yGroupKey}`,\n                                    x: xGroupKey,\n                                    y: yGroupKey,\n                                    value: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n                                    normalizedValue: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n                                };\n                            }\n                            const cell = result.facets[facetKey].cells[xGroupKey][yGroupKey];\n                            cell.value[valueSource] = value;\n                            cell.normalizedValue[valueSource] = value;\n\n                            valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n                            valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n                        }\n                    }\n                }\n            }\n            // add aggregated values for X annotations\n            if (aggregation.x) {\n                xNewKeys.forEach(xGroupKey => {\n                    additionalDataColumnsX.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        xGroups[xGroupKey].forEach((xKey) => {\n                            values.push(result.meta.xDataByKeys[columnKey][xKey]);\n                            delete result.meta.xDataByKeys[columnKey][xKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.xDataByKeys[columnKey][xGroupKey] = value;\n                    });\n                });\n            }\n            // add aggregated values for Y annotations\n            if (aggregation.y) {\n                additionalDataColumnsY.forEach(columnKey => {\n                    result.meta.yDataByKeys[columnKey] = {};\n                });\n                yNewKeys.forEach(yGroupKey => {\n                    additionalDataColumnsY.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            values.push(result.meta.yDataByKeys[columnKey][yKey]);\n                            delete result.meta.yDataByKeys[columnKey][yKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.yDataByKeys[columnKey][yGroupKey] = value;\n                    });\n                });\n            }\n            // erase grouping - we aggregated by them and now there is no grouping in the chart;\n            // replace axis keys with group keys - now group keys are new axis keys\n            if (aggregation.x) {\n                result.facets[facetKey].xKeys = Object.keys(xKeysByGroups);\n                result.facets[facetKey].xKeysByGroups = { 'null': result.facets[facetKey].xKeys };\n                result.meta.xLabels = result.meta.xGroupLabels;\n                result.meta.xGroupKeys = ['null'];\n                result.meta.xGroupKeyValues = { null: ['null'] };\n            }\n            if (aggregation.y) {\n                result.facets[facetKey].yKeys = Object.keys(yKeysByGroups);\n                result.facets[facetKey].yKeysByGroups = { 'null': result.facets[facetKey].yKeys };\n                result.meta.yLabels = result.meta.yGroupLabels;\n                result.meta.yGroupKeys = ['null'];\n                result.meta.yGroupKeyValues = { null: ['null'] };\n            }\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n}\n\nfunction updateValueExtent<T extends string>(result: GroupedCellsData<T>, cell: Cell<T>) {\n    for (const valueSource of result.meta.valueSources) {\n        result.meta.valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][0]);\n        result.meta.valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][1]);\n    }\n\n}\nfunction applyNormalization<T extends string>(\n    result: GroupedCellsData<T>,\n    normalizationBySources: Record<T, HeatmapSettingsImpl['normalization']>,\n) {\n    if (Object.values(normalizationBySources).length) {\n        const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n            if (normalizationBySources[key]) {\n                r[key] = [Infinity, -Infinity] as [number, number];\n            }\n            return r;\n        }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells } = result.facets[facetKey];\n\n            for (const valueSource of result.meta.valueSources) {\n                const normalization = normalizationBySources[valueSource];\n                if (!normalization) {\n                    continue;\n                }\n                const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n                const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n                const cellGetter = normalization.direction === 'row'\n                    ? (cellKey: string, groupKey: string) => cells[cellKey]?.[groupKey]\n                    : (cellKey: string, groupKey: string) => cells[groupKey]?.[cellKey];\n                groupKeys.forEach((groupKey) => {\n                    const values: number[] = [];\n                    cellKeys.forEach((cellKey) => {\n                        const v = cellGetter(cellKey, groupKey)?.value?.[valueSource];\n                        if (v !== undefined) {\n                            values.push(v as number);\n                        }\n                    });\n                    const normalize = getNormalizationFn(normalization.method, values);\n                    cellKeys.forEach((cellKey) => {\n                        const cell = cellGetter(cellKey, groupKey);\n                        if (cell !== undefined) {\n                            cell.normalizedValue[valueSource] = normalize(cell.value?.[valueSource] as number);\n                            valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n                            valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n                        }\n                    });\n                });\n            }\n\n        });\n        result.meta.valueExtent = {...result.meta.valueExtent, valueExtent};\n    }\n}\n\nexport function fillCellsData<T extends string>(\n    result: GroupedCellsData<T>,\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumns: Record<string, ColumnName>,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalizationBySource: Record<T, HeatmapSettingsImpl['normalization']>, // separated for color and size for example\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'] | BubbleSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'] | BubbleSettingsImpl['chartSettings']['yAxis'],\n    aggregation: HeatmapSettingsImpl['aggregation'],\n) {\n    const facetKeysLists = facetBy.length\n        ? facetBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const xGroupKeysLists = xGroupBy.length\n        ? xGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const yGroupKeysLists = yGroupBy.length\n        ? yGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const facetKeysCombinations = getKeysCombinations(facetKeysLists);\n    const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n    const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n    const facetKeys = facetKeysCombinations.map(getFacetOrGroupKey);\n    const xGroupKeys = xGroupKeysCombinations.map(getFacetOrGroupKey);\n    const yGroupKeys = yGroupKeysCombinations.map(getFacetOrGroupKey);\n\n    result.meta.facetKeys = facetKeys;\n    result.meta.xGroupKeys = xGroupKeys;\n    result.meta.yGroupKeys = yGroupKeys;\n    result.meta.facetKeyValues = facetKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = facetKeysCombinations[index];\n        return res;\n    }, {});\n    result.meta.xGroupKeyValues = xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = xGroupKeysCombinations[index];\n        return res;\n    }, {});\n    result.meta.yGroupKeyValues = yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = yGroupKeysCombinations[index];\n        return res;\n    }, {});\n\n    const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n    const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n    const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n    const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n    const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n    const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n    for (let i = 0; i < data.rowsCount; i++) {\n        const facetKey = getFacetOrGroupKey(facetBy.map(column => data.getColumnValue(column.value, i)));\n        const xGroupKey = getFacetOrGroupKey(xGroupBy.map(column => data.getColumnValue(column.value, i)));\n        const yGroupKey = getFacetOrGroupKey(yGroupBy.map(column => data.getColumnValue(column.value, i)));\n        const xGroupLabel = xGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n        const yGroupLabel = yGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n        result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n        result.meta.yGroupLabels[yGroupKey] = yGroupLabel;\n        const x = String(data.getColumnValue(xColumn.value, i));\n        const y = String(data.getColumnValue(yColumn.value, i));\n\n        const values = result.meta.valueSources.reduce((r, key) => {\n            r[key] = (data.getColumnValue(valueColumns[key].value, i) ?? NAValueAs) as number | null;\n            return r;\n        }, {} as Record<string, DataValue>);\n\n        if (x === 'null' || y === 'null' || Object.values(values).every(v => v === null)) {\n            continue;\n        }\n\n        if (!result.facets[facetKey]) {\n            result.facets[facetKey] = {\n                xKeys: [],\n                yKeys: [],\n                xKeysByGroups: {},\n                yKeysByGroups: {},\n                cells: {},\n            };\n        }\n        if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n        }\n        if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n        }\n        result.facets[facetKey].xKeys.push(x);\n        result.facets[facetKey].yKeys.push(y);\n        result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n        result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n        if (!result.facets[facetKey].cells[x]) {\n            result.facets[facetKey].cells[x] = {};\n        }\n\n        for (const valueSource of result.meta.valueSources) {\n            if (result.facets[facetKey].cells[x][y] && result.facets[facetKey].cells[x][y].value[valueSource] !== values[valueSource]) {\n                throw Error(`More than 1 value for x=${x}, y=${y}`);\n            }\n        }\n\n        const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n        if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n            throw Error(`More than 1 x-label value for x=${x}`);\n        }\n        const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n        if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n            throw Error(`More than 1 y-label value for y=${y}`);\n        }\n        result.meta.xLabels[x] = String(xLabelsSourceValue);\n        result.meta.yLabels[y] = String(yLabelsSourceValue);\n        // data for labels, annotations and dendrograms by X\n        additionalDataColumnsX.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.xDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n            }\n        });\n        // data for labels, annotations and dendrograms by Y\n        additionalDataColumnsY.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.yDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n            }\n        });\n        result.facets[facetKey].cells[x][y] = {\n            isCell: true,\n            idx: i,\n            id: `${x}_${y}`,\n            x,\n            y,\n            value: values,\n            normalizedValue: values,\n        };\n\n        updateValueExtent(result, result.facets[facetKey].cells[x][y]);\n    }\n\n    result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n    // make uniq x, y, x-group and y-group keys\n    result.meta.facetKeys.forEach(facetKey => {\n        const facet = result.facets[facetKey];\n        const uniqueXKeys = lodash.uniq(facet.xKeys);\n        const uniqueYKeys = lodash.uniq(facet.yKeys);\n        facet.xKeys = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], uniqueXKeys) : uniqueXKeys;\n        facet.yKeys = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], uniqueYKeys) : uniqueYKeys;\n        xGroupKeys.forEach(xGroupKey => {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.intersection(\n                facet.xKeys,\n                result.facets[facetKey].xKeysByGroups[xGroupKey]\n            );\n        });\n        yGroupKeys.forEach(yGroupKey => {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.intersection(\n                facet.yKeys,\n                result.facets[facetKey].yKeysByGroups[yGroupKey]\n            );\n        });\n    });\n\n    applyAggregation(result, aggregation, additionalDataColumnsX, additionalDataColumnsY, annotations);\n    applyNormalization(result, normalizationBySource);\n\n    // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n    result.meta.xKeysByGroups = result.meta.xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n        const existingXKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n        ), xAxis.sorting, result.meta.xLabels);\n        res[xGroupKey] = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], existingXKeys) : existingXKeys;\n        return res;\n    }, {});\n    result.meta.xKeys = result.meta.xGroupKeys.reduce((res: string[], xGroupKey: string) => {\n        res = res.concat(result.meta.xKeysByGroups[xGroupKey]);\n        return res;\n    }, []);\n\n    result.meta.yKeysByGroups = result.meta.yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n        const existingYKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].yKeysByGroups[yGroupKey]))\n        ), yAxis.sorting, result.meta.yLabels);\n        res[yGroupKey] = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], existingYKeys) : existingYKeys;\n        return res;\n    }, {});\n    result.meta.yKeys = result.meta.yGroupKeys.reduce((res: string[], yGroupKey: string) => {\n        res = res.concat(result.meta.yKeysByGroups[yGroupKey]);\n        return res;\n    }, []);\n\n    for (const valueSource of result.meta.valueSources) {\n        // avoid render errors on empty data\n        if (result.meta.valueExtent[valueSource][0] === Infinity) {\n            result.meta.valueExtent[valueSource][0] = 0;\n        }\n        if (result.meta.valueExtent[valueSource][1] === -Infinity) {\n            result.meta.valueExtent[valueSource][1] = 0;\n        }\n    }\n\n    return 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package/dist/heatmap/getCells.d.ts

@@ -1,40 +1,8 @@
 import { DataFrame } from '../DataFrame';
-import { ColumnName, DataValue } from '../types';
+import { ColumnName } from '../types';
 import { HeatmapSettingsImpl } from './HeatmapSettingsImpl';
-export type Cell = {
-    isCell: true;
-    idx: number;
-    id: string;
-    value: DataValue;
-    normalizedValue: DataValue;
-    x: DataValue;
-    y: DataValue;
-};
-export type GroupedCellsData = {
-    meta: {
-        facetKeys: string[];
-        xGroupKeys: string[];
-        yGroupKeys: string[];
-        xKeysByGroups: Record<string, string[]>;
-        yKeysByGroups: Record<string, string[]>;
-        facetKeyValues: Record<string, string[]>;
-        xGroupKeyValues: Record<string, string[]>;
-        yGroupKeyValues: Record<string, string[]>;
-        xLabels: Record<string, string>;
-        yLabels: Record<string, string>;
-        xGroupLabels: Record<string, string>;
-        yGroupLabels: Record<string, string>;
-        valueExtent: [number, number];
-        xDataByKeys: Record<string, Record<string, DataValue>>;
-        yDataByKeys: Record<string, Record<string, DataValue>>;
-    };
-    facets: Record<string, {
-        xKeys: string[];
-        yKeys: string[];
-        xKeysByGroups: Record<string, string[]>;
-        yKeysByGroups: Record<string, string[]>;
-        cells: Record<string, Record<string, Cell>>;
-    }>;
-};
-export declare function getCells(data: DataFrame, xColumn: ColumnName, yColumn: ColumnName, valueColumn: ColumnName, facetBy: ColumnName[], xGroupBy: ColumnName[], yGroupBy: ColumnName[], annotations: HeatmapSettingsImpl['annotations'], dendrogramX: HeatmapSettingsImpl['dendrogramX'], dendrogramY: HeatmapSettingsImpl['dendrogramY'], normalization: HeatmapSettingsImpl['normalization'], NAValueAs: HeatmapSettingsImpl['NAValueAs'], keysOrder: HeatmapSettingsImpl['keysOrder'], xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'], yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'], aggregation: HeatmapSettingsImpl['aggregation']): GroupedCellsData;
+import { Cell, GroupedCellsData } from './fillCellsData';
+export type CellHeatmap = Cell<'dataSource'>;
+export type GroupedCellsHeatmap = GroupedCellsData<'dataSource'>;
+export declare function getCells(data: DataFrame, xColumn: ColumnName, yColumn: ColumnName, valueColumns: Record<string, ColumnName>, facetBy: ColumnName[], xGroupBy: ColumnName[], yGroupBy: ColumnName[], annotations: HeatmapSettingsImpl['annotations'], dendrogramX: HeatmapSettingsImpl['dendrogramX'], dendrogramY: HeatmapSettingsImpl['dendrogramY'], normalization: HeatmapSettingsImpl['normalization'], NAValueAs: HeatmapSettingsImpl['NAValueAs'], keysOrder: HeatmapSettingsImpl['keysOrder'], xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'], yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'], aggregation: HeatmapSettingsImpl['aggregation']): GroupedCellsHeatmap;
 //# sourceMappingURL=getCells.d.ts.map

package/dist/heatmap/getCells.d.ts.map

@@ -1 +1 @@
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package/dist/heatmap/getCells.js

@@ -1,66 +1,11 @@
-import K from "../node_modules/lodash/lodash.js";
-import { exhaustive as ee } from "../utils/index.js";
-import X from "../node_modules/d3-array/src/mean.js";
-import { quantileSorted as te } from "../node_modules/d3-array/src/quantile.js";
-import ae from "../node_modules/d3-array/src/deviation.js";
-import se from "../node_modules/d3-array/src/extent.js";
-function ne(t) {
-  const s = ae(t), n = X(t);
-  return s === void 0 || n === void 0 || s === 0 ? (u) => u : (u) => (u - n) / s;
-}
-function oe(t) {
-  const s = X(t), [n, u] = se(t);
-  return s === void 0 || n === void 0 || u === void 0 || u === n ? (r) => r : (r) => (r - s) / (u - n);
-}
-function le(t, s) {
-  return t === "standardScaling" ? ne(s) : t === "meanNormalization" ? oe(s) : (n) => n;
-}
-function N(t, s) {
-  switch (t) {
-    case "max": {
-      let n = s[0];
-      for (const u of s)
-        n = Math.max(n, u);
-      return n;
-    }
-    case "min": {
-      let n = s[0];
-      for (const u of s)
-        n = Math.min(n, u);
-      return n;
-    }
-    case "median": {
-      const n = s.sort((u, r) => u - r);
-      return te(n, 0.5);
-    }
-    case "mean":
-      return X(s) ?? s[0];
-    default:
-      ee(t, `Unknown aggregation function ${t}`);
-  }
-}
-function P(t) {
-  const s = [...new Set(t)].sort();
-  return s.length > 3 ? [...s.slice(0, 3), "..."].join(", ") : s.join(", ");
-}
-function A(t) {
-  if (!t.length)
-    return [];
-  let s = [[]];
-  return t.forEach((n) => {
-    const u = [];
-    n.forEach((r) => {
-      u.push(...s.map((p) => [...p, r]));
-    }), s = u;
-  }), s;
-}
-const Q = (t, s, n = {}) => t.sort(
-  (u, r) => s === "asc" ? (n[u] ?? u).localeCompare(n[r] ?? r, "en", { numeric: !0 }) : (n[r] ?? r).localeCompare(n[u] ?? u, "en", { numeric: !0 })
-);
-function ue() {
+import { fillCellsData as b } from "./fillCellsData.js";
+function d() {
   return {
     meta: {
+      valueSources: ["dataSource"],
       facetKeys: [],
+      xKeys: [],
+      yKeys: [],
       xGroupKeys: [],
       yGroupKeys: [],
       xKeysByGroups: {},
@@ -74,165 +19,34 @@ function ue() {
       facetKeyValues: {},
       xGroupKeyValues: {},
       yGroupKeyValues: {},
-      valueExtent: [1 / 0, -1 / 0]
+      valueExtent: { dataSource: [1 / 0, -1 / 0] }
     },
     facets: {}
   };
 }
-function ie(t, s, n, u, r) {
-  if (s.x || s.y) {
-    const p = [1 / 0, -1 / 0];
-    t.meta.facetKeys.forEach((y) => {
-      const { xKeys: B, yKeys: w, cells: g, xKeysByGroups: G, yKeysByGroups: E } = t.facets[y], c = s.x ? G : B.reduce((e, i) => (e[i] = [i], e), {}), V = s.y ? E : w.reduce((e, i) => (e[i] = [i], e), {}), d = Object.keys(c), D = Object.keys(V);
-      for (const e of d)
-        for (const i of D) {
-          const b = [];
-          if (c[e].forEach((v) => {
-            V[i].forEach((C) => {
-              var $, q, S;
-              const x = (q = ($ = g[v]) == null ? void 0 : $[C]) == null ? void 0 : q.value;
-              x !== void 0 && (b.push(x), (S = g[v]) == null || delete S[C]);
-            });
-          }), b.length > 0) {
-            const v = N(s.method, b);
-            t.facets[y].cells[e] || (t.facets[y].cells[e] = {}), t.facets[y].cells[e][i] = {
-              isCell: !0,
-              idx: 0,
-              id: `${e}_${i}`,
-              x: e,
-              y: i,
-              value: v,
-              normalizedValue: v
-            }, p[0] = Math.min(v, p[0]), p[1] = Math.max(v, p[1]);
-          }
-        }
-      s.x && d.forEach((e) => {
-        n.forEach((i) => {
-          const b = r.find((x) => x.valueColumn.value === i || x.valueColumn.valueLabels === i);
-          if (!b)
-            return;
-          const v = [];
-          c[e].forEach((x) => {
-            v.push(t.meta.xDataByKeys[i][x]), delete t.meta.xDataByKeys[i][x];
-          });
-          const C = b.type === "continuous" ? N(s.method, v) : P(v);
-          t.meta.xDataByKeys[i][e] = C;
-        });
-      }), s.y && (u.forEach((e) => {
-        t.meta.yDataByKeys[e] = {};
-      }), D.forEach((e) => {
-        u.forEach((i) => {
-          const b = r.find((x) => x.valueColumn.value === i || x.valueColumn.valueLabels === i);
-          if (!b)
-            return;
-          const v = [];
-          V[e].forEach((x) => {
-            v.push(t.meta.yDataByKeys[i][x]), delete t.meta.yDataByKeys[i][x];
-          });
-          const C = b.type === "continuous" ? N(s.method, v) : P(v);
-          t.meta.yDataByKeys[i][e] = C;
-        });
-      })), s.x && (t.facets[y].xKeys = Object.keys(G), t.facets[y].xKeysByGroups = { null: t.facets[y].xKeys }, t.meta.xLabels = t.meta.xGroupLabels, t.meta.xGroupKeys = ["null"], t.meta.xGroupKeyValues = { null: ["null"] }), s.y && (t.facets[y].yKeys = Object.keys(E), t.facets[y].yKeysByGroups = { null: t.facets[y].yKeys }, t.meta.yLabels = t.meta.yGroupLabels, t.meta.yGroupKeys = ["null"], t.meta.yGroupKeyValues = { null: ["null"] });
-    }), t.meta.valueExtent = p;
-  }
-}
-function re(t, s) {
-  if (s) {
-    const n = [1 / 0, -1 / 0];
-    t.meta.facetKeys.forEach((u) => {
-      const { xKeys: r, yKeys: p, cells: y } = t.facets[u], B = s.direction === "row" ? r : p, w = s.direction === "row" ? p : r, g = s.direction === "row" ? (G, E) => {
-        var c;
-        return (c = y[G]) == null ? void 0 : c[E];
-      } : (G, E) => {
-        var c;
-        return (c = y[E]) == null ? void 0 : c[G];
-      };
-      w.forEach((G) => {
-        const E = [];
-        B.forEach((V) => {
-          var D;
-          const d = (D = g(V, G)) == null ? void 0 : D.value;
-          d !== void 0 && E.push(d);
-        });
-        const c = le(s.method, E);
-        B.forEach((V) => {
-          const d = g(V, G);
-          d !== void 0 && (d.normalizedValue = c(d.value), n[0] = Math.min(d.normalizedValue, n[0]), n[1] = Math.max(d.normalizedValue, n[1]));
-        });
-      });
-    }), t.meta.valueExtent = n;
-  }
-}
-function xe(t, s, n, u, r, p, y, B, w, g, G, E, c, V, d, D) {
-  const e = ue(), i = r.length ? r.map((a) => c[a.value] ?? t.getColumnCategories(a.value)) : [["null"]], b = p.length ? p.map((a) => c[a.value] ?? t.getColumnCategories(a.value)) : [["null"]], v = y.length ? y.map((a) => c[a.value] ?? t.getColumnCategories(a.value)) : [["null"]], C = A(i), x = A(b), $ = A(v), q = C.map((a) => a.join("_")), S = x.map((a) => a.join("_")), z = $.map((a) => a.join("_"));
-  e.meta.facetKeys = q, e.meta.xGroupKeys = S, e.meta.yGroupKeys = z, e.meta.facetKeyValues = q.reduce((a, o, f) => (a[o] = C[f], a), {}), e.meta.xGroupKeyValues = S.reduce((a, o, f) => (a[o] = x[f], a), {}), e.meta.yGroupKeyValues = z.reduce((a, o, f) => (a[o] = $[f], a), {});
-  const Y = s.valueLabels ?? s.value, F = n.valueLabels ?? n.value, T = B.filter((a) => a.axis === "x").map((a) => a.valueColumn.valueLabels ?? a.valueColumn.value), W = B.filter((a) => a.axis === "y").map((a) => a.valueColumn.valueLabels ?? a.valueColumn.value), Z = Object.values(w ?? {}).map((a) => a.value), O = Object.values(g ?? {}).map((a) => a.value), R = K.uniq([...T, ...Z, Y]), U = K.uniq([...W, ...O, F]);
-  for (let a = 0; a < t.rowsCount; a++) {
-    const o = r.length ? r.map((l) => t.getColumnValue(l.value, a)).join("_") : "null", f = p.length ? p.map((l) => t.getColumnValue(l.value, a)).join("_") : "null", L = y.length ? y.map((l) => t.getColumnValue(l.value, a)).join("_") : "null", j = p.length ? p.map((l) => t.getColumnValue(l.valueLabels ?? l.value, a)).join(", ") : "", k = y.length ? y.map((l) => t.getColumnValue(l.valueLabels ?? l.value, a)).join(", ") : "";
-    e.meta.xGroupLabels[f] = j, e.meta.yGroupLabels[L] = k;
-    const m = String(t.getColumnValue(s.value, a)), h = String(t.getColumnValue(n.value, a)), M = t.getColumnValue(u.value, a) ?? E;
-    if (m === "null" || h === "null" || M === null)
-      continue;
-    if (e.facets[o] || (e.facets[o] = {
-      xKeys: [],
-      yKeys: [],
-      xKeysByGroups: {},
-      yKeysByGroups: {},
-      cells: {}
-    }), e.facets[o].xKeysByGroups[f] || (e.facets[o].xKeysByGroups[f] = []), e.facets[o].yKeysByGroups[L] || (e.facets[o].yKeysByGroups[L] = []), e.facets[o].xKeys.push(m), e.facets[o].yKeys.push(h), e.facets[o].xKeysByGroups[f].push(m), e.facets[o].yKeysByGroups[L].push(h), e.facets[o].cells[m] || (e.facets[o].cells[m] = {}), e.meta.valueExtent[0] = Math.min(M, e.meta.valueExtent[0]), e.meta.valueExtent[1] = Math.max(M, e.meta.valueExtent[1]), e.facets[o].cells[m][h] && e.facets[o].cells[m][h].value !== M)
-      throw Error(`More than 1 value for x=${m}, y=${h}`);
-    const H = t.getColumnValue(Y, a);
-    if (e.meta.xLabels[m] && String(H) !== e.meta.xLabels[m])
-      throw Error(`More than 1 x-label value for x=${m}`);
-    const J = t.getColumnValue(F, a);
-    if (e.meta.yLabels[h] && String(J) !== e.meta.yLabels[h])
-      throw Error(`More than 1 y-label value for y=${h}`);
-    e.meta.xLabels[m] = String(H), e.meta.yLabels[h] = String(J), R.forEach((l) => {
-      const I = typeof e.meta.xDataByKeys[l] < "u", _ = I && typeof e.meta.xDataByKeys[l][m] < "u";
-      if (I || (e.meta.xDataByKeys[l] = {}), _ && e.meta.xDataByKeys[l][m] !== t.getColumnValue(l, a))
-        throw Error(`More than 1 value for x = ${m} and column = ${l}`);
-      _ || (e.meta.xDataByKeys[l][m] = t.getColumnValue(l, a));
-    }), U.forEach((l) => {
-      const I = typeof e.meta.yDataByKeys[l] < "u", _ = I && typeof e.meta.yDataByKeys[l][h] < "u";
-      if (I || (e.meta.yDataByKeys[l] = {}), _ && e.meta.yDataByKeys[l][h] !== t.getColumnValue(l, a))
-        throw Error(`More than 1 value for y = ${h} and column = ${l}`);
-      _ || (e.meta.yDataByKeys[l][h] = t.getColumnValue(l, a));
-    }), e.facets[o].cells[m][h] = {
-      isCell: !0,
-      idx: a,
-      id: `${m}_${h}`,
-      x: m,
-      y: h,
-      value: M,
-      normalizedValue: M
-    };
-  }
-  return e.meta.facetKeys = e.meta.facetKeys.filter((a) => e.facets[a]), e.meta.facetKeys.forEach((a) => {
-    const o = e.facets[a], f = K.uniq(o.xKeys), L = K.uniq(o.yKeys);
-    o.xKeys = c[s.value] ? K.intersection(c[s.value], f) : f, o.yKeys = c[n.value] ? K.intersection(c[n.value], L) : L, S.forEach((j) => {
-      e.facets[a].xKeysByGroups[j] = K.intersection(
-        o.xKeys,
-        e.facets[a].xKeysByGroups[j]
-      );
-    }), z.forEach((j) => {
-      e.facets[a].yKeysByGroups[j] = K.intersection(
-        o.yKeys,
-        e.facets[a].yKeysByGroups[j]
-      );
-    });
-  }), ie(e, D, R, U, B), re(e, G), e.meta.xKeysByGroups = e.meta.xGroupKeys.reduce((a, o) => {
-    const f = Q(K.uniq(
-      K.flatten(e.meta.facetKeys.map((L) => e.facets[L].xKeysByGroups[o]))
-    ), V.sorting, e.meta.xLabels);
-    return a[o] = c[s.value] ? K.intersection(c[s.value], f) : f, a;
-  }, {}), e.meta.yKeysByGroups = e.meta.yGroupKeys.reduce((a, o) => {
-    const f = Q(K.uniq(
-      K.flatten(e.meta.facetKeys.map((L) => e.facets[L].yKeysByGroups[o]))
-    ), d.sorting, e.meta.yLabels);
-    return a[o] = c[n.value] ? K.intersection(c[n.value], f) : f, a;
-  }, {}), e.meta.valueExtent[0] === 1 / 0 && (e.meta.valueExtent[0] = 0), e.meta.valueExtent[1] === -1 / 0 && (e.meta.valueExtent[1] = 0), e;
+function B(a, y, s, t, u, r, o, l, n, p, K, c, f, x, G, i) {
+  const e = d();
+  return b(
+    e,
+    a,
+    y,
+    s,
+    t,
+    u,
+    r,
+    o,
+    l,
+    n,
+    p,
+    { dataSource: K },
+    c,
+    f,
+    x,
+    G,
+    i
+  ), e;
 }
 export {
-  xe as getCells
+  B as getCells
 };
 //# sourceMappingURL=getCells.js.map

package/dist/heatmap/getCells.js.map

@@ -1 +1 @@
-{"version":3,"file":"getCells.js","sources":["../../src/heatmap/getCells.ts"],"sourcesContent":["import { deviation, extent, mean, quantileSorted } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { AggregationMethod, ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { exhaustive } from '../utils';\n\nfunction normalizeByStd(values: number[]) {\n    const stdValue = deviation(values);\n    const meanValue = mean(values);\n\n    if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values: number[]) {\n    const meanValue = mean(values);\n    const [min, max] = extent(values);\n    if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method: NormalizationMethod, values: number[]) {\n    if (method === 'standardScaling') {\n        return normalizeByStd(values);\n    }\n    if (method === 'meanNormalization') {\n        return normalizeByMinMax(values);\n    }\n    return (v: number) => v;\n}\n\nfunction aggregateNumeric(method: AggregationMethod, values: number[]) {\n    switch (method) {\n        case 'max': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.max(res, v);\n            }\n            return res;\n        }\n        case 'min': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.min(res, v);\n            }\n            return res;\n        }\n        case 'median': {\n            const valuesSorted = values.sort((a, b) => a - b);\n            return quantileSorted(valuesSorted, 0.5) as number;\n        }\n        case 'mean': {\n            return mean(values) ?? values[0];\n        }\n        default: exhaustive(method, `Unknown aggregation function ${method}`);\n    }\n}\nfunction aggregateString(values: string[]) {\n    const list = [...new Set(values)].sort();\n    if (list.length > 3) {\n        return [...list.slice(0, 3), '...'].join(', ');\n    }\n    return list.join(', ');\n}\n\nexport type Cell = {\n    isCell: true;\n    idx: number;\n    id: string;\n    value: DataValue;\n    normalizedValue: DataValue;\n    x: DataValue;\n    y: DataValue;\n};\n\nexport type GroupedCellsData = {\n    meta: {\n        facetKeys: string[];\n        xGroupKeys: string[];\n        yGroupKeys: string[];\n        xKeysByGroups: Record<string, string[]>;\n        yKeysByGroups: Record<string, string[]>;\n        // for titles, if facet by more 1 columns title has several values separated by commas\n        facetKeyValues: Record<string, string[]>;\n        xGroupKeyValues: Record<string, string[]>;\n        yGroupKeyValues: Record<string, string[]>;\n        xLabels: Record<string, string>;\n        yLabels: Record<string, string>;\n        xGroupLabels: Record<string, string>;\n        yGroupLabels: Record<string, string>;\n        valueExtent: [number, number]; // for color scales\n        // data for labels, annotations and dendrograms\n        xDataByKeys: Record<string, Record<string, DataValue>>;\n        yDataByKeys: Record<string, Record<string, DataValue>>;\n    };\n    //facet groups\n    facets: Record<\n        string,\n        {\n            // axis keys\n            xKeys: string[];\n            yKeys: string[];\n            // axis keys grouped by group keys from meta\n            xKeysByGroups: Record<string, string[]>;\n            yKeysByGroups: Record<string, string[]>;\n            // cells grouped by X, then by Y\n            cells: Record<string, Record<string, Cell>>;\n        }\n    >;\n};\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n    if (!keysLists.length) {\n        return [];\n    }\n    let result: string[][] = [[]];\n    keysLists.forEach(keys => {\n        const nextResult: string[][] = [];\n        keys.forEach(key => {\n            nextResult.push(...result.map(resultItem => [...resultItem, key]));\n        });\n        result = nextResult;\n    });\n    return result;\n}\nconst sortByLabels = (arr: string[], direction: 'asc' | 'desc', labels: Record<string, string> = {}) => {\n    return arr.sort((a, b) => direction === 'asc'\n        ? (labels[a] ?? a).localeCompare((labels[b] ?? b), 'en', { numeric: true })\n        : (labels[b] ?? b).localeCompare((labels[a] ?? a), 'en', { numeric: true })\n    );\n};\n\nfunction createEmptyGroupedCells(): GroupedCellsData {\n    return {\n        meta: {\n            facetKeys: [],\n            xGroupKeys: [],\n            yGroupKeys: [],\n            xKeysByGroups: {},\n            yKeysByGroups: {},\n            xLabels: {},\n            yLabels: {},\n            xGroupLabels: {},\n            yGroupLabels: {},\n            xDataByKeys: {},\n            yDataByKeys: {},\n            facetKeyValues: {},\n            xGroupKeyValues: {},\n            yGroupKeyValues: {},\n            valueExtent: [Infinity, -Infinity],\n        },\n        facets: {},\n    };\n}\n\nfunction applyAggregation(\n    result: GroupedCellsData,\n    aggregation: HeatmapSettingsImpl['aggregation'],\n    additionalDataColumnsX: string[],\n    additionalDataColumnsY: string[],\n    annotations: HeatmapSettingsImpl['annotations']\n) {\n    if (aggregation.x || aggregation.y) {\n        const valueExtent = [Infinity, -Infinity] as [number, number];\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells, xKeysByGroups, yKeysByGroups } = result.facets[facetKey];\n            const xGroups = aggregation.x ? xKeysByGroups : xKeys.reduce((res, xKey) => { res[xKey] = [xKey]; return res; }, {} as Record<string, string[]>);\n            const yGroups = aggregation.y ? yKeysByGroups : yKeys.reduce((res, yKey) => { res[yKey] = [yKey]; return res; }, {} as Record<string, string[]>);\n            const xNewKeys = Object.keys(xGroups);\n            const yNewKeys = Object.keys(yGroups);\n            for (const xGroupKey of xNewKeys) {\n                for (const yGroupKey of yNewKeys) {\n                    const values: number[] = [];\n                    xGroups[xGroupKey].forEach((xKey) => {\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            const cellValue = cells[xKey]?.[yKey]?.value;\n                            if (cellValue !== undefined) {\n                                values.push(cellValue as number);\n                                delete cells[xKey]?.[yKey];\n                            }\n                        });\n                    });\n                    if (values.length > 0) {\n                        const value = aggregateNumeric(aggregation.method, values);\n                        if (!result.facets[facetKey].cells[xGroupKey]) {\n                            result.facets[facetKey].cells[xGroupKey] = {};\n                        }\n                        result.facets[facetKey].cells[xGroupKey][yGroupKey] = {\n                            isCell: true,\n                            idx: 0,\n                            id: `${xGroupKey}_${yGroupKey}`,\n                            x: xGroupKey,\n                            y: yGroupKey,\n                            value,\n                            normalizedValue: value,\n                        };\n                        valueExtent[0] = Math.min(value, valueExtent[0]);\n                        valueExtent[1] = Math.max(value, valueExtent[1]);\n                    }\n                }\n            }\n            if (aggregation.x) {\n                xNewKeys.forEach(xGroupKey => {\n                    additionalDataColumnsX.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        xGroups[xGroupKey].forEach((xKey) => {\n                            values.push(result.meta.xDataByKeys[columnKey][xKey]);\n                            delete result.meta.xDataByKeys[columnKey][xKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.xDataByKeys[columnKey][xGroupKey] = value;\n                    });\n                });\n            }\n            if (aggregation.y) {\n                additionalDataColumnsY.forEach(columnKey => {\n                    result.meta.yDataByKeys[columnKey] = {};\n                });\n                yNewKeys.forEach(yGroupKey => {\n                    additionalDataColumnsY.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            values.push(result.meta.yDataByKeys[columnKey][yKey]);\n                            delete result.meta.yDataByKeys[columnKey][yKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.yDataByKeys[columnKey][yGroupKey] = value;\n                    });\n                });\n            }\n            if (aggregation.x) {\n                result.facets[facetKey].xKeys = Object.keys(xKeysByGroups);\n                result.facets[facetKey].xKeysByGroups = { 'null': result.facets[facetKey].xKeys };\n                result.meta.xLabels = result.meta.xGroupLabels;\n                result.meta.xGroupKeys = ['null'];\n                result.meta.xGroupKeyValues = { null: ['null'] };\n            }\n            if (aggregation.y) {\n                result.facets[facetKey].yKeys = Object.keys(yKeysByGroups);\n                result.facets[facetKey].yKeysByGroups = { 'null': result.facets[facetKey].yKeys };\n                result.meta.yLabels = result.meta.yGroupLabels;\n                result.meta.yGroupKeys = ['null'];\n                result.meta.yGroupKeyValues = { null: ['null'] };\n            }\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n}\nfunction applyNormalization(result: GroupedCellsData, normalization: HeatmapSettingsImpl['normalization']) {\n    if (normalization) {\n        const valueExtent = [Infinity, -Infinity] as [number, number];\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells } = result.facets[facetKey];\n            const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n            const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n            const cellGetter = normalization.direction === 'row'\n                ? (cellKey: string, groupKey: string) => cells[cellKey]?.[groupKey]\n                : (cellKey: string, groupKey: string) => cells[groupKey]?.[cellKey];\n            groupKeys.forEach((groupKey) => {\n                const values: number[] = [];\n                cellKeys.forEach((cellKey) => {\n                    const v = cellGetter(cellKey, groupKey)?.value;\n                    if (v !== undefined) {\n                        values.push(v as number);\n                    }\n                });\n                const normalize = getNormalizationFn(normalization.method, values);\n                cellKeys.forEach((cellKey) => {\n                    const cell = cellGetter(cellKey, groupKey);\n                    if (cell !== undefined) {\n                        cell.normalizedValue = normalize(cell.value as number);\n                        valueExtent[0] = Math.min(cell.normalizedValue, valueExtent[0]);\n                        valueExtent[1] = Math.max(cell.normalizedValue, valueExtent[1]);\n                    }\n                });\n            });\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n}\n\nexport function getCells(\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumn: ColumnName,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalization: HeatmapSettingsImpl['normalization'],\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'],\n    aggregation: HeatmapSettingsImpl['aggregation'],\n): GroupedCellsData {\n    const result: GroupedCellsData = createEmptyGroupedCells();\n\n    const facetKeysLists = facetBy.length\n        ? facetBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const xGroupKeysLists = xGroupBy.length\n        ? xGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const yGroupKeysLists = yGroupBy.length\n        ? yGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const facetKeysCombinations = getKeysCombinations(facetKeysLists);\n    const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n    const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n    const facetKeys = facetKeysCombinations.map(keys => keys.join('_'));\n    const xGroupKeys = xGroupKeysCombinations.map(keys => keys.join('_'));\n    const yGroupKeys = yGroupKeysCombinations.map(keys => keys.join('_'));\n\n    result.meta.facetKeys = facetKeys;\n    result.meta.xGroupKeys = xGroupKeys;\n    result.meta.yGroupKeys = yGroupKeys;\n    result.meta.facetKeyValues = facetKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = facetKeysCombinations[index];\n        return res;\n    }, {});\n    result.meta.xGroupKeyValues = xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = xGroupKeysCombinations[index];\n        return res;\n    }, {});\n    result.meta.yGroupKeyValues = yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = yGroupKeysCombinations[index];\n        return res;\n    }, {});\n\n    const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n    const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n    const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n    const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n    const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n    const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n    for (let i = 0; i < data.rowsCount; i++) {\n        const facetKey = facetBy.length ? facetBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n        const xGroupKey = xGroupBy.length ? xGroupBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n        const yGroupKey = yGroupBy.length ? yGroupBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n        const xGroupLabel = xGroupBy.length ? xGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ') : '';\n        const yGroupLabel = yGroupBy.length ? yGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ') : '';\n        result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n        result.meta.yGroupLabels[yGroupKey] = yGroupLabel;\n        const x = String(data.getColumnValue(xColumn.value, i));\n        const y = String(data.getColumnValue(yColumn.value, i));\n        const value = (data.getColumnValue(valueColumn.value, i) ?? NAValueAs) as number | null;\n\n        if (x === 'null' || y === 'null' || value === null) {\n            continue;\n        }\n\n        if (!result.facets[facetKey]) {\n            result.facets[facetKey] = {\n                xKeys: [],\n                yKeys: [],\n                xKeysByGroups: {},\n                yKeysByGroups: {},\n                cells: {},\n            };\n        }\n        if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n        }\n        if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n        }\n        result.facets[facetKey].xKeys.push(x);\n        result.facets[facetKey].yKeys.push(y);\n        result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n        result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n        if (!result.facets[facetKey].cells[x]) {\n            result.facets[facetKey].cells[x] = {};\n        }\n        result.meta.valueExtent[0] = Math.min(value, result.meta.valueExtent[0]);\n        result.meta.valueExtent[1] = Math.max(value, result.meta.valueExtent[1]);\n        if (result.facets[facetKey].cells[x][y] && result.facets[facetKey].cells[x][y].value !== value) {\n            throw Error(`More than 1 value for x=${x}, y=${y}`);\n        }\n        const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n        if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n            throw Error(`More than 1 x-label value for x=${x}`);\n        }\n        const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n        if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n            throw Error(`More than 1 y-label value for y=${y}`);\n        }\n        result.meta.xLabels[x] = String(xLabelsSourceValue);\n        result.meta.yLabels[y] = String(yLabelsSourceValue);\n        // data for labels, annotations and dendrograms by X\n        additionalDataColumnsX.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.xDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n            }\n        });\n        // data for labels, annotations and dendrograms by Y\n        additionalDataColumnsY.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.yDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n            }\n        });\n        result.facets[facetKey].cells[x][y] = {\n            isCell: true,\n            idx: i,\n            id: `${x}_${y}`,\n            x,\n            y,\n            value,\n            normalizedValue: value,\n        };\n    }\n\n    result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n    // make uniq x, y, x-group and y-group keys\n    result.meta.facetKeys.forEach(facetKey => {\n        const facet = result.facets[facetKey];\n        const uniqueXKeys = lodash.uniq(facet.xKeys);\n        const uniqueYKeys = lodash.uniq(facet.yKeys);\n        facet.xKeys = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], uniqueXKeys) : uniqueXKeys;\n        facet.yKeys = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], uniqueYKeys) : uniqueYKeys;\n        xGroupKeys.forEach(xGroupKey => {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.intersection(\n                facet.xKeys,\n                result.facets[facetKey].xKeysByGroups[xGroupKey]\n            );\n        });\n        yGroupKeys.forEach(yGroupKey => {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.intersection(\n                facet.yKeys,\n                result.facets[facetKey].yKeysByGroups[yGroupKey]\n            );\n        });\n    });\n\n    applyAggregation(result, aggregation, additionalDataColumnsX, additionalDataColumnsY, annotations);\n    applyNormalization(result, normalization);\n\n    // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n    result.meta.xKeysByGroups = result.meta.xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n        const existingXKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n        ), xAxis.sorting, result.meta.xLabels);\n        res[xGroupKey] = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], existingXKeys) : existingXKeys;\n        return res;\n    }, {});\n    result.meta.yKeysByGroups = result.meta.yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n        const existingYKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].yKeysByGroups[yGroupKey]))\n        ), yAxis.sorting, result.meta.yLabels);\n        res[yGroupKey] = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], existingYKeys) : existingYKeys;\n        return res;\n    }, {});\n\n    // avoid render errors on empty data\n    if (result.meta.valueExtent[0] === Infinity) {\n        result.meta.valueExtent[0] = 0;\n    }\n    if (result.meta.valueExtent[1] === -Infinity) {\n        result.meta.valueExtent[1] = 0;\n    }\n\n    return 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+{"version":3,"file":"getCells.js","sources":["../../src/heatmap/getCells.ts"],"sourcesContent":["import type { DataFrame } from '../DataFrame';\nimport type { ColumnName } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport type { Cell, GroupedCellsData } from './fillCellsData';\nimport { fillCellsData } from './fillCellsData';\n\nexport type CellHeatmap = Cell<'dataSource'>\nexport type GroupedCellsHeatmap = GroupedCellsData<'dataSource'>;\n\nfunction createEmptyGroupedCells(): GroupedCellsHeatmap {\n    return {\n        meta: {\n            valueSources: ['dataSource'],\n            facetKeys: [],\n            xKeys: [],\n            yKeys: [],\n            xGroupKeys: [],\n            yGroupKeys: [],\n            xKeysByGroups: {},\n            yKeysByGroups: {},\n            xLabels: {},\n            yLabels: {},\n            xGroupLabels: {},\n            yGroupLabels: {},\n            xDataByKeys: {},\n            yDataByKeys: {},\n            facetKeyValues: {},\n            xGroupKeyValues: {},\n            yGroupKeyValues: {},\n            valueExtent: { dataSource: [Infinity, -Infinity] },\n        },\n        facets: {},\n    };\n}\n\nexport function getCells(\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumns: Record<string, ColumnName>,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalization: HeatmapSettingsImpl['normalization'],\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'],\n    aggregation: HeatmapSettingsImpl['aggregation'],\n): GroupedCellsHeatmap {\n    const result: GroupedCellsHeatmap = createEmptyGroupedCells();\n    fillCellsData(\n        result,\n        data,\n        xColumn, yColumn, valueColumns,\n        facetBy, xGroupBy, yGroupBy,\n        annotations,\n        dendrogramX, dendrogramY,\n        {dataSource: normalization},\n        NAValueAs,\n        keysOrder,\n        xAxis,\n        yAxis,\n        aggregation\n    );\n    return result;\n}\n"],"names":["createEmptyGroupedCells","getCells","data","xColumn","yColumn","valueColumns","facetBy","xGroupBy","yGroupBy","annotations","dendrogramX","dendrogramY","normalization","NAValueAs","keysOrder","xAxis","yAxis","aggregation","result","fillCellsData"],"mappings":";AASA,SAASA,IAA+C;AACpD,SAAO;AAAA,IACH,MAAM;AAAA,MACF,cAAc,CAAC,YAAY;AAAA,MAC3B,WAAW,CAAA;AAAA,MACX,OAAO,CAAA;AAAA,MACP,OAAO,CAAA;AAAA,MACP,YAAY,CAAA;AAAA,MACZ,YAAY,CAAA;AAAA,MACZ,eAAe,CAAA;AAAA,MACf,eAAe,CAAA;AAAA,MACf,SAAS,CAAA;AAAA,MACT,SAAS,CAAA;AAAA,MACT,cAAc,CAAA;AAAA,MACd,cAAc,CAAA;AAAA,MACd,aAAa,CAAA;AAAA,MACb,aAAa,CAAA;AAAA,MACb,gBAAgB,CAAA;AAAA,MAChB,iBAAiB,CAAA;AAAA,MACjB,iBAAiB,CAAA;AAAA,MACjB,aAAa,EAAE,YAAY,CAAC,OAAU,MAAS,EAAA;AAAA,IAAE;AAAA,IAErD,QAAQ,CAAA;AAAA,EAAC;AAEjB;AAEO,SAASC,EACZC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACAC,GACmB;AACnB,QAAMC,IAA8BlB,EAAA;AACpC,SAAAmB;AAAA,IACID;AAAA,IACAhB;AAAA,IACAC;AAAA,IAASC;AAAA,IAASC;AAAA,IAClBC;AAAA,IAASC;AAAA,IAAUC;AAAA,IACnBC;AAAA,IACAC;AAAA,IAAaC;AAAA,IACb,EAAC,YAAYC,EAAA;AAAA,IACbC;AAAA,IACAC;AAAA,IACAC;AAAA,IACAC;AAAA,IACAC;AAAA,EAAA,GAEGC;AACX;"}

package/dist/heatmap/getDendrograms.d.ts

@@ -1,10 +1,10 @@
 import { Cluster } from './components/types';
-import { GroupedCellsData } from './getCells';
+import { GroupedCellsHeatmap } from './getCells';
 import { HeatmapSettingsImpl } from './HeatmapSettingsImpl';
 import { HierarchyNode } from 'd3-hierarchy';
 export type DendrogramsData = Record<string, {
     hierarchyByGroupX: Record<string, HierarchyNode<Cluster>>;
     hierarchyByGroupY: Record<string, HierarchyNode<Cluster>>;
 }>;
-export declare function getDendrograms(groupedCellsData: GroupedCellsData, dendrogramX: HeatmapSettingsImpl['dendrogramX'], dendrogramY: HeatmapSettingsImpl['dendrogramY'], facetSettings: HeatmapSettingsImpl['facetSettings']): DendrogramsData;
+export declare function getDendrograms(groupedCellsData: GroupedCellsHeatmap, dendrogramX: HeatmapSettingsImpl['dendrogramX'], dendrogramY: HeatmapSettingsImpl['dendrogramY'], facetSettings: HeatmapSettingsImpl['facetSettings']): DendrogramsData;
 //# sourceMappingURL=getDendrograms.d.ts.map

package/dist/heatmap/getDendrograms.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"getDendrograms.d.ts","sourceRoot":"","sources":["../../src/heatmap/getDendrograms.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AACtD,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,uBAAuB,CAAC;AAEjE,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,cAAc,CAAC;AAGlD,MAAM,MAAM,eAAe,GAAG,MAAM,CAAC,MAAM,EAAE;IACzC,iBAAiB,EAAE,MAAM,CAAC,MAAM,EAAE,aAAa,CAAC,OAAO,CAAC,CAAC,CAAC;IAC1D,iBAAiB,EAAE,MAAM,CAAC,MAAM,EAAE,aAAa,CAAC,OAAO,CAAC,CAAC,CAAC;CAC7D,CAAC,CAAA;AAIF,wBAAgB,cAAc,CAC1B,gBAAgB,EAAE,mBAAmB,EACrC,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,aAAa,EAAE,mBAAmB,CAAC,eAAe,CAAC,GACpD,eAAe,CAwEjB"}

package/dist/heatmap/getDendrograms.js

@@ -1,41 +1,41 @@
 import { getClustersApproximate as K } from "./getClusters.js";
 import m from "../node_modules/d3-hierarchy/src/hierarchy/index.js";
-function b(t, y, p, B) {
+function b(t, r, p, B) {
   const { facetKeys: G, xGroupKeys: w, yGroupKeys: E } = t.meta, x = {};
-  if (y && B.sharedX)
+  if (r && B.sharedX)
     throw Error("Dendrogram on X axis is not available with shared by facets X axis");
   return G.forEach((c) => {
     const u = {
       hierarchyByGroupX: {},
       hierarchyByGroupY: {}
     }, o = t.facets[c];
-    if (y) {
-      const i = [];
+    if (r) {
+      const y = [];
       w.forEach((s) => {
-        const r = o.xKeysByGroups[s], f = o.yKeys, n = K(
-          r.map((e) => f.map((l) => {
+        const i = o.xKeysByGroups[s], f = o.yKeys, a = K(
+          i.map((e) => f.map((l) => {
             var h;
-            return ((h = o.cells[e][l]) == null ? void 0 : h.normalizedValue) ?? y.fillNA;
+            return ((h = o.cells[e][l]) == null ? void 0 : h.normalizedValue.dataSource) ?? r.fillNA;
           })),
-          y.distance,
-          y.linkage
-        ), a = n.indexes.map((e) => r[e]);
-        t.facets[c].xKeysByGroups[s] = a, i.push(...a), u.hierarchyByGroupX[s] = m(n);
-      }), t.facets[c].xKeys = i;
+          r.distance,
+          r.linkage
+        ), n = a.indexes.map((e) => i[e]);
+        t.facets[c].xKeysByGroups[s] = n, y.push(...n), u.hierarchyByGroupX[s] = m(a);
+      }), t.facets[c].xKeys = y;
     }
     if (p) {
-      const i = [];
+      const y = [];
       E.forEach((s) => {
-        const r = o.yKeysByGroups[s], f = o.xKeys, n = K(
-          r.map((e) => f.map((l) => {
+        const i = o.yKeysByGroups[s], f = o.xKeys, a = K(
+          i.map((e) => f.map((l) => {
             var h;
-            return ((h = o.cells[l][e]) == null ? void 0 : h.normalizedValue) ?? p.fillNA;
+            return ((h = o.cells[l][e]) == null ? void 0 : h.normalizedValue.dataSource) ?? p.fillNA;
           })),
           p.distance,
           p.linkage
-        ), a = n.indexes.map((e) => r[e]);
-        t.facets[c].yKeysByGroups[s] = a, i.push(...a), u.hierarchyByGroupY[s] = m(n);
-      }), t.facets[c].yKeys = i;
+        ), n = a.indexes.map((e) => i[e]);
+        t.facets[c].yKeysByGroups[s] = n, y.push(...n), u.hierarchyByGroupY[s] = m(a);
+      }), t.facets[c].yKeys = y;
     }
     x[c] = u;
   }), x;