@milaboratories/miplots4 1.0.141 → 1.0.143

package/dist/dendro/ChartRenderer.js.map

@@ -1 +1 @@
-{"version":3,"file":"ChartRenderer.js","sources":["../../src/dendro/ChartRenderer.tsx"],"sourcesContent":["import type { HierarchyNode, HierarchyPointNode } from 'd3-hierarchy';\nimport { cluster } from 'd3-hierarchy';\nimport type { ScaleLinear, ScaleOrdinal, ScalePower } from 'd3-scale';\nimport { scaleLinear, scaleOrdinal, scaleSqrt } from 'd3-scale';\nimport type { ReactElement } from 'react';\nimport type { Root } from 'react-dom/client';\nimport { createRoot } from 'react-dom/client';\nimport { Error } from '../common/Error';\nimport { BLACK } from '../constants';\nimport type { DataFrame } from '../DataFrame';\nimport { DEFAULT_DOT_AES, LEGEND_OFFSET } from '../scatterplot/constants';\nimport type {\n    CategoricalAesFromColumn,\n    ClickEventData,\n    ColumnName,\n    ContinuousAesFromColumn,\n    DataValue,\n    DendroLegendInfo,\n    LineShape,\n    PointShape,\n} from '../types';\nimport { isCategoricalAes, isContinuousAes } from '../types';\nimport { getContinuousLegendTicks } from '../utils/getContinuousLegendTicks';\nimport { getContinuousLegendWidth, getDiscreteLegendWidth } from '../utils/getLegendWidth';\nimport { TextMeasurer } from '../utils/TextMeasurer/TextMeasurer';\nimport { Chart } from './components/Chart';\nimport type { ChartScales, ChartSizes, DotAesItem, LegendData, LegendItem } from './components/types';\nimport {\n    COLOR_NULL,\n    HEATMAP_LEFT_OFFSET,\n    HEIGHT,\n    MARGIN,\n    MAX_HEATMAP_WIDTH,\n    MAX_LEGEND_HEIGHT,\n    WIDTH,\n} from './constants';\nimport type { DendroSettingsImpl } from './DendroSettingsImpl';\nimport type { HeatmapData } from './getHeatmapData';\nimport type { TreeNodeData } from './getHierarchyData';\nimport { updateLinksHeight, updateNodesHorizontalPosition } from './getHierarchyData';\n\nfunction createAesGetter<InputType extends string | number | PointShape | LineShape>(\n    dataFrame: DataFrame,\n    aesItem: InputType | CategoricalAesFromColumn<InputType> | ContinuousAesFromColumn<InputType>\n): (idx: number) => InputType {\n    if (isCategoricalAes<InputType>(aesItem)) {\n        return (idx: number) => aesItem.valuesMap[String(dataFrame.getColumnValue(aesItem.columnName.value, idx))];\n    }\n    if (isContinuousAes<InputType>(aesItem)) {\n        // size\n        const {domain, range} = aesItem;\n        const scale: ScalePower<InputType, InputType> = scaleSqrt<InputType, InputType>().domain(domain).range(range);\n        return (idx: number) => {\n            const v = scale(Number(dataFrame.getColumnValue(aesItem.columnName.value, idx)));\n            return Math.max(1, v as number) as InputType;\n        };\n    }\n    return (_: number) => aesItem;\n}\n\nfunction createAesGetters(dataFrame: DataFrame, aes: DendroSettingsImpl['aes']) {\n    return {\n        nodeShape: createAesGetter<string>(dataFrame, aes.nodeShape),\n        nodeColor: createAesGetter<string>(dataFrame, aes.nodeColor),\n        nodeSize: createAesGetter<number>(dataFrame, aes.nodeSize),\n        lineShape: createAesGetter<string>(dataFrame, aes.lineShape),\n        lineColor: createAesGetter<string>(dataFrame, aes.lineColor),\n    };\n}\n\nconst getSteps = (count: number, valueExtent: number[]) => {\n    const min = Math.min(...valueExtent);\n    const max = Math.max(...valueExtent);\n    if (min === max) {\n        const steps = count % 2 === 0 ? [] : [min];\n        for (let i = 1; i < count / 2 + 1; i++) {\n            steps.push(min + i);\n            steps.unshift(min - i);\n        }\n        return steps;\n    }\n    if (count < 2) {\n        return [min, max];\n    }\n    const step = (max - min) / (count - 1);\n    const steps = [];\n    for (let i = 0; i < count - 1; i++) {\n        steps.push(min + step * i);\n    }\n    steps.push(max);\n    return steps;\n};\n\nfunction getCellHeight(leavesCount: number, scale = 1, minHeight?: number, maxHeight?: number) {\n    const valueByNodeCount = (leavesCount < 16 ? 40 : leavesCount < 49 ? 32 : 24) * scale;\n    return Math.max(Math.min(valueByNodeCount, maxHeight ?? Infinity), minHeight ?? -Infinity);\n}\n\nclass ChartRenderer {\n    component: ReactElement = (<></>);\n    reactRoot: Root | null = null;\n    parentNode: HTMLElement | null = null;\n    rootNode: HTMLElement | null = null;\n    chartSizes: ChartSizes = {\n        treeWidth: WIDTH,\n        treeHeight: HEIGHT,\n        heatmapWidth: 0,\n        heatmapHeight: 0,\n        totalWidth: WIDTH + WIDTH + MARGIN.LEFT + MARGIN.RIGHT,\n        totalHeight: HEIGHT + MARGIN.TOP + MARGIN.BOTTOM,\n        labelsOffset: 0,\n    };\n\n    legend: LegendData = {width: 0, height: 0, items: []};\n\n    // heatmap scales and step\n    heatmapScales: ChartScales = {\n        x: scaleOrdinal<string, number>().domain(['null']).range([1]),\n        y: scaleOrdinal<string, number>().domain(['null']).range([1]),\n    };\n    heatmapStep: {x: number; y: number} = {x: 0, y: 0};\n    heatmapColorScale: {\n        scale: ScaleLinear<string, string> | ScaleOrdinal<string, string, string>;\n        getter: (v: DataValue) => string;\n    } = {\n        scale: scaleOrdinal([]),\n        getter: () => 'white',\n    };\n    heatmapLabels: string[] = [];\n\n    clear() {\n        if (this.parentNode && this.rootNode) {\n            this.parentNode?.removeChild(this.rootNode);\n            this.parentNode = null;\n            this.rootNode = null;\n        }\n        // timeout to avoid trying to unmount during rendering\n        setTimeout(() => {\n            this.reactRoot?.unmount();\n            this.reactRoot = null;\n        });\n    }\n\n    init(node: HTMLElement) {\n        if (this.parentNode === null) {\n            this.parentNode = node;\n            this.rootNode = document.createElement('div');\n            this.parentNode.appendChild(this.rootNode);\n            this.reactRoot = createRoot(this.rootNode);\n        }\n    }\n\n    updateHeatmapScales(\n        heatmapData: HeatmapData | null,\n        heatmapSettings: DendroSettingsImpl['heatmapSettings'],\n        size: DendroSettingsImpl['chartSettings']['size']\n    ) {\n        if (heatmapData === null) {\n            this.chartSizes.heatmapWidth = 0;\n            return;\n        }\n        const {xKeysByGroups, xGroupKeys, xKeys, yKeys} = heatmapData;\n        const groupGap = 5;\n        // for shared facets max cells counts in group should be used\n        const xCounts = xGroupKeys.map(xGroupKey => xKeysByGroups[xGroupKey].length);\n        const xCellsCount = xCounts.reduce((sum, count) => sum + count, 0);\n        const yStep = this.chartSizes.treeHeight / yKeys.length;\n        const xStep = Math.min(\n            Math.max(\n                (MAX_HEATMAP_WIDTH - (xCounts.filter(count => count > 0).length - 1) * groupGap) / xCellsCount,\n                size.minCellWidth\n            ),\n            size.maxCellWidth\n        );\n\n        const xPositions: number[] = [];\n        let currentX = 0;\n        xGroupKeys.forEach(xKey => {\n            const axisKeys = xKeysByGroups[xKey];\n            axisKeys.forEach(() => {\n                xPositions.push(currentX);\n                currentX += xStep;\n            });\n            // do not add offset for empty group\n            if (axisKeys.length > 0) {\n                currentX += groupGap;\n            }\n        });\n\n        this.heatmapScales.x = scaleOrdinal<string, number>().domain(xKeys).range(xPositions);\n        this.heatmapScales.y = scaleOrdinal<string, number>()\n            .domain(yKeys)\n            .range(yKeys.map((_key, idx) => idx * yStep));\n        this.heatmapStep.x = xStep;\n        this.heatmapStep.y = yStep;\n\n        const {colorsList, colorsMap} = heatmapSettings.aes;\n        if (heatmapSettings.valueType === 'continuous' && colorsList) {\n            const scale = scaleLinear<string, string>()\n                .domain(getSteps(colorsList.length, heatmapData.meta.valueExtent))\n                .range(colorsList);\n            this.heatmapColorScale = {\n                scale,\n                getter: v => scale(v as number),\n            };\n        }\n        if (heatmapSettings.valueType === 'discrete' && colorsMap) {\n            const values = Object.keys(colorsMap).filter(key => heatmapData.meta.uniqueValues.has(key));\n            this.heatmapColorScale = {\n                scale: scaleOrdinal(\n                    values,\n                    values.map(v => colorsMap[v])\n                ).unknown(COLOR_NULL),\n                getter: v => (v ? colorsMap[v] ?? COLOR_NULL : COLOR_NULL),\n            };\n        }\n        if (heatmapSettings.valueType === 'stringSource' && colorsList) {\n            const values = [...heatmapData.meta.uniqueValues];\n            const scale = scaleOrdinal(\n                values,\n                values.map((_v, idx) => colorsList[idx % colorsList.length])\n            ).unknown(COLOR_NULL);\n            this.heatmapColorScale = {\n                scale,\n                getter: v => (v ? scale(v as string) : COLOR_NULL),\n            };\n        }\n\n        this.chartSizes.heatmapWidth =\n            this.heatmapScales.x(heatmapData.xKeys[heatmapData.xKeys.length - 1]) + this.heatmapStep.x;\n    }\n\n    updateLegendSize(\n        legend: DendroSettingsImpl['chartSettings']['legend'],\n        legendLabels: DendroLegendInfo,\n        aes: DendroSettingsImpl['aes'],\n        heatmapAnnotation: DendroSettingsImpl['heatmapAnnotation'],\n        heatmapData: HeatmapData | null,\n        heatmapSettings: DendroSettingsImpl['heatmapSettings']\n    ) {\n        if (!legend.show) {\n            this.legend = {\n                width: 0,\n                height: 0,\n                items: [],\n            };\n            return;\n        }\n        const textMeasurer = new TextMeasurer('600 14px Arial');\n        const LINE_HEIGHT = 16;\n        const GROUP_OFFSET = 48;\n        const TEXT_LEFT_DISCRETE = 20;\n        const COLUMN_OFFSET = 24;\n\n        function getLegendItemWidth(keys: string[], title: string) {\n            return Math.max(\n                ...keys.map(text => textMeasurer.getTextWidth(String(text)) + TEXT_LEFT_DISCRETE),\n                textMeasurer.getTextWidth(title)\n            );\n        }\n\n        const columns: {\n            columnKey: string;\n            data: Record<string, DotAesItem>;\n            values: string[];\n            labels: Record<string, string>;\n        }[] = [];\n\n        const aesGrouping: ColumnName[] = [aes.nodeColor, aes.nodeShape, aes.lineColor]\n            .filter(isCategoricalAes)\n            .map(item => (item as CategoricalAesFromColumn<string>).columnName);\n        aesGrouping.forEach(column => {\n            const info = legendLabels[column.value];\n            if (info.usedAes.length === 0 || !info.aesMap) {\n                return;\n            }\n            const columnKey = column.label ?? column.value;\n            const columnValues = info.values;\n            const aesData: Record<string, DotAesItem> = {};\n            columnValues.forEach(columnValue => {\n                if (!aesData[columnValue]) {\n                    aesData[columnValue] = {...DEFAULT_DOT_AES} as DotAesItem;\n                }\n                info.usedAes.forEach(key => {\n                    if (key === 'dotFill' || key === 'lineColor') {\n                        aesData[columnValue].color = info.aesMap[columnValue]?.[key] ?? BLACK;\n                    }\n                    if (key === 'dotShape') {\n                        aesData[columnValue].shape = info.aesMap[columnValue]?.[key] ?? '21';\n                    }\n                    if (key === 'dotSize') {\n                        aesData[columnValue].size = info.aesMap[columnValue]?.[key] ?? 3;\n                    }\n                });\n            });\n\n            columns.push({\n                columnKey,\n                data: aesData,\n                values: info.values,\n                labels: info.labels,\n            });\n        });\n        const legendItems: LegendItem[] = [];\n        let currentColumnWidth = 0;\n        let currentColumnHeight = 0;\n        let currentLeft = 0;\n        let maxHeight = Math.min(this.chartSizes.treeHeight, MAX_LEGEND_HEIGHT);\n\n        if (heatmapAnnotation && heatmapData) {\n            const type = heatmapSettings.valueType;\n            const title = heatmapAnnotation.label ?? heatmapAnnotation.value;\n            if (type === 'continuous') {\n                const colorScale = this.heatmapColorScale.scale as ScaleLinear<string, string>;\n                const values = getContinuousLegendTicks(colorScale, heatmapData.meta.valueExtent, 4);\n                const width = getContinuousLegendWidth(values, title);\n                const legendItem: LegendItem = {\n                    id: 'heatmapValue',\n                    type: 'continuous',\n                    width,\n                    height: maxHeight,\n                    left: 0,\n                    top: 0,\n                    title,\n                    scale: colorScale,\n                    values,\n                    labels: {},\n                };\n                legendItems.push(legendItem);\n                currentColumnHeight = legendItem.height + GROUP_OFFSET;\n                currentColumnWidth = legendItem.width;\n            } else {\n                const colorScale = this.heatmapColorScale.scale as ScaleOrdinal<string, string>;\n                const width = getDiscreteLegendWidth(colorScale, title);\n                const values = colorScale.domain();\n                const height = values.length * LINE_HEIGHT;\n                const legendItem: LegendItem = {\n                    id: 'heatmapValue',\n                    type: 'discrete',\n                    width,\n                    height,\n                    left: 0,\n                    top: 0,\n                    title,\n                    scale: colorScale,\n                    values,\n                    labels: {},\n                };\n                legendItems.push(legendItem);\n                currentColumnHeight = legendItem.height + GROUP_OFFSET;\n                currentColumnWidth = legendItem.width;\n            }\n        }\n\n        columns.map(({columnKey, labels, values, data}) => {\n            if (currentColumnHeight > maxHeight) {\n                currentColumnHeight = 0;\n                currentLeft += currentColumnWidth + COLUMN_OFFSET;\n            }\n            const title = columnKey;\n            const width = getLegendItemWidth(\n                values.map(v => labels[v]),\n                title\n            );\n            const height = values.length * LINE_HEIGHT;\n            if (height > maxHeight) {\n                maxHeight = height;\n            }\n            const scale = scaleOrdinal<DotAesItem>()\n                .domain(values)\n                .range(values.map(value => data[value]));\n            const left = currentLeft;\n            const top = currentColumnHeight;\n            legendItems.push({id: columnKey, type: 'nodes', width, height, left, top, title, scale, values, labels});\n            currentColumnWidth = width;\n            currentColumnHeight += height + GROUP_OFFSET;\n        });\n\n        if (isContinuousAes(aes.nodeSize)) {\n            if (currentColumnHeight > maxHeight) {\n                currentColumnHeight = 0;\n                currentLeft += currentColumnWidth + COLUMN_OFFSET;\n            }\n            const {columnName, domain, range} = aes.nodeSize;\n            const title = columnName.label ?? columnName.value;\n            const scale = scaleSqrt(domain, range);\n            const values = scale.ticks(3);\n            const format = scale.tickFormat(3);\n            const labels = values.reduce((res: Record<string, string>, v) => {\n                res[String(v)] = format(v);\n                return res;\n            }, {});\n            const width = getLegendItemWidth(\n                values.map(v => labels[v]),\n                title\n            );\n            const height = (scale(Math.max(...values)) * 2 + 4) * values.length;\n            if (height > maxHeight) {\n                maxHeight = height;\n            }\n            const left = currentLeft;\n            const top = currentColumnHeight;\n            legendItems.push({id: columnName.value, type: 'size', width, height, left, top, title, scale, values, labels});\n            currentColumnWidth = width;\n            currentColumnHeight += height + GROUP_OFFSET;\n        }\n\n        const legendWidth = currentLeft + currentColumnWidth + 2 * LEGEND_OFFSET;\n        const legendHeight = maxHeight;\n\n        this.legend = {\n            width: legendWidth,\n            height: legendHeight,\n            items: legendItems,\n        };\n    }\n\n    updateChartSizes(\n        size: DendroSettingsImpl['chartSettings']['size'],\n        heatmapData: HeatmapData | null,\n        hierarchy: HierarchyNode<TreeNodeData>\n    ) {\n        const leavesCount = hierarchy.leaves().length;\n        this.chartSizes.treeWidth = heatmapData ? size.width / 2 : size.width;\n\n        const height = getCellHeight(leavesCount, size.scale, size.minCellHeight, size.maxCellHeight) * leavesCount;\n\n        this.chartSizes.treeHeight = height;\n        this.chartSizes.heatmapHeight = height;\n    }\n\n    updateTotalSizes(heatmapData: HeatmapData | null) {\n        this.chartSizes.totalWidth =\n            this.chartSizes.treeWidth + this.chartSizes.heatmapWidth + this.legend.width + MARGIN.LEFT + MARGIN.RIGHT;\n        if (heatmapData) {\n            this.chartSizes.totalWidth += HEATMAP_LEFT_OFFSET;\n        }\n        if (this.legend.width > 0) {\n            this.chartSizes.totalWidth += HEATMAP_LEFT_OFFSET;\n        }\n        this.chartSizes.totalHeight =\n            Math.max(this.chartSizes.treeHeight, this.legend.height) + MARGIN.TOP + MARGIN.BOTTOM;\n    }\n\n    prepareTableLabels(heatmapData: HeatmapData | null) {\n        const textMeasurer = new TextMeasurer('bold 14px Arial');\n        const ELLIPSIS = '…';\n\n        if (this.heatmapStep.x < 12 || !heatmapData) {\n            this.heatmapLabels = [];\n            return;\n        }\n\n        const limit = this.heatmapStep.x - 4;\n\n        this.heatmapLabels = heatmapData.xKeys.map(x => {\n            const label = heatmapData.meta.xLabels[x];\n            let size = textMeasurer.getTextWidth(label);\n            if (size < limit) {\n                return label;\n            }\n            let curLabel = label;\n            let letters = curLabel?.length;\n            while (size > limit && letters > 0) {\n                letters--;\n                curLabel = label?.substring(0, letters) + ELLIPSIS;\n                size = textMeasurer.getTextWidth(curLabel);\n            }\n\n            return letters > 0 ? curLabel : '';\n        });\n    }\n\n    addLabelsWidthToTreeArea(root: HierarchyPointNode<TreeNodeData>, showLeavesLabels: boolean) {\n        if (!showLeavesLabels) {\n            return;\n        }\n        const leaves = root.leaves();\n        const textMeasurer = new TextMeasurer('bold 14px Manrope');\n\n        let offset = 0;\n        leaves.forEach(node => {\n            if (!node.data.label) {\n                return;\n            }\n            const size = textMeasurer.getTextWidth(node.data.label);\n            const diff = node.y + size - this.chartSizes.treeWidth + 8; // 8 - offset between point center and label\n            if (diff > offset) {\n                offset = diff;\n            }\n        });\n\n        this.chartSizes.treeWidth += offset;\n    }\n\n    render(\n        dataFrame: DataFrame,\n        chartSettings: DendroSettingsImpl['chartSettings'],\n        hierarchy: HierarchyNode<TreeNodeData>,\n        connectionType: DendroSettingsImpl['connectionType'],\n        rootPosition: DendroSettingsImpl['rootPosition'],\n        edgeInheritance: DendroSettingsImpl['edgeInheritance'],\n        showNodes: DendroSettingsImpl['showNodes'],\n        showEdges: DendroSettingsImpl['showEdges'],\n        showLeavesLabels: DendroSettingsImpl['showLeavesLabels'],\n        showNodesLabels: DendroSettingsImpl['showNodesLabels'],\n        aes: DendroSettingsImpl['aes'],\n        labels: DendroSettingsImpl['labels'],\n        heatmapAnnotation: DendroSettingsImpl['heatmapAnnotation'],\n        heatmapData: HeatmapData | null,\n        heatmapSettings: DendroSettingsImpl['heatmapSettings'],\n        legendLabels: DendroLegendInfo,\n        leavesMode: DendroSettingsImpl['leavesMode'],\n        onClick: (data: ClickEventData) => void\n    ) {\n        this.updateChartSizes(chartSettings.size, heatmapData, hierarchy);\n        this.updateHeatmapScales(heatmapData, heatmapSettings, chartSettings.size);\n        this.updateLegendSize(chartSettings.legend, legendLabels, aes, heatmapAnnotation, heatmapData, heatmapSettings);\n        this.prepareTableLabels(heatmapData);\n\n        const clusterSize: [number, number] =\n            rootPosition === 'top'\n                ? [this.chartSizes.treeWidth, this.chartSizes.treeHeight]\n                : [this.chartSizes.treeHeight, this.chartSizes.treeWidth];\n        cluster<TreeNodeData>()\n            .size(clusterSize)\n            .separation(() => 1)(hierarchy);\n        const root = hierarchy as HierarchyPointNode<TreeNodeData>;\n\n        updateLinksHeight(\n            root,\n            rootPosition === 'top' ? this.chartSizes.treeHeight : this.chartSizes.treeWidth,\n            leavesMode === 'alignLeavesToLine'\n        );\n        updateNodesHorizontalPosition(root);\n\n        this.addLabelsWidthToTreeArea(root, showLeavesLabels);\n        this.updateTotalSizes(heatmapData);\n\n        const aesGetters = createAesGetters(dataFrame, aes);\n        const component = (\n            <Chart\n                chartSizes={this.chartSizes}\n                chartSettings={chartSettings}\n                nodes={root.descendants()}\n                links={root.links()}\n                connectionType={connectionType}\n                rootPosition={rootPosition}\n                edgeInheritance={edgeInheritance}\n                showNodes={showNodes}\n                showEdges={showEdges}\n                showLeavesLabels={showLeavesLabels}\n                showNodesLabels={showNodesLabels}\n                aesGetters={aesGetters}\n                labels={labels}\n                heatmapData={heatmapData}\n                heatmapScales={this.heatmapScales}\n                heatmapStep={this.heatmapStep}\n                heatmapColor={this.heatmapColorScale.getter}\n                heatmapLabels={this.heatmapLabels}\n                legendData={this.legend}\n                onClick={onClick}\n            />\n        );\n\n        this.component = component;\n        this.reactRoot?.render(component);\n    }\n\n    renderError(message: string) {\n        this.reactRoot?.render(<Error message={message} />);\n    }\n}\n\nexport default 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+{"version":3,"file":"ChartRenderer.js","sources":["../../src/dendro/ChartRenderer.tsx"],"sourcesContent":["import type { HierarchyNode, HierarchyPointNode } from 'd3-hierarchy';\nimport { cluster } from 'd3-hierarchy';\nimport type { ScaleLinear, ScaleOrdinal, ScalePower } from 'd3-scale';\nimport { scaleLinear, scaleOrdinal, scaleSqrt } from 'd3-scale';\nimport type { ReactElement } from 'react';\nimport type { Root } from 'react-dom/client';\nimport { createRoot } from 'react-dom/client';\nimport { Error } from '../common/Error';\nimport { BLACK } from '../constants';\nimport type { DataFrame } from '../DataFrame';\nimport { DEFAULT_DOT_AES, LEGEND_OFFSET } from '../scatterplot/constants';\nimport type {\n    CategoricalAesFromColumn,\n    ClickEventData,\n    ColumnName,\n    ContinuousAesFromColumn,\n    DataValue,\n    DendroLegendInfo,\n    LineShape,\n    PointShape,\n} from '../types';\nimport { isCategoricalAes, isContinuousAes } from '../types';\nimport { getContinuousLegendTicks } from '../utils/getContinuousLegendTicks';\nimport { getContinuousLegendWidth, getDiscreteLegendWidth } from '../utils/getLegendWidth';\nimport { TextMeasurer } from '../utils/TextMeasurer/TextMeasurer';\nimport { Chart } from './components/Chart';\nimport type { ChartScales, ChartSizes, DotAesItem, LegendData, LegendItem } from './components/types';\nimport {\n    COLOR_NULL,\n    HEATMAP_LEFT_OFFSET,\n    HEIGHT,\n    MARGIN,\n    MAX_HEATMAP_WIDTH,\n    MAX_LEGEND_HEIGHT,\n    WIDTH,\n} from './constants';\nimport type { DendroSettingsImpl } from './DendroSettingsImpl';\nimport type { HeatmapData } from './getHeatmapData';\nimport type { TreeNodeData } from './getHierarchyData';\nimport { updateLinksHeight, updateNodesHorizontalPosition } from './getHierarchyData';\n\nfunction createAesGetter<InputType extends string | number | PointShape | LineShape>(\n    dataFrame: DataFrame,\n    aesItem: InputType | CategoricalAesFromColumn<InputType> | ContinuousAesFromColumn<InputType>\n): (idx: number) => InputType {\n    if (isCategoricalAes<InputType>(aesItem)) {\n        return (idx: number) => aesItem.valuesMap[String(dataFrame.getColumnValue(aesItem.columnName.value, idx))];\n    }\n    if (isContinuousAes<InputType>(aesItem)) {\n        // size\n        const {domain, range} = aesItem;\n        const scale: ScalePower<InputType, InputType> = scaleSqrt<InputType, InputType>().domain(domain).range(range);\n        return (idx: number) => {\n            const v = scale(Number(dataFrame.getColumnValue(aesItem.columnName.value, idx)));\n            return Math.max(1, v as number) as InputType;\n        };\n    }\n    return (_: number) => aesItem;\n}\n\nfunction createAesGetters(dataFrame: DataFrame, aes: DendroSettingsImpl['aes']) {\n    return {\n        nodeShape: createAesGetter<string>(dataFrame, aes.nodeShape),\n        nodeColor: createAesGetter<string>(dataFrame, aes.nodeColor),\n        nodeSize: createAesGetter<number>(dataFrame, aes.nodeSize),\n        lineShape: createAesGetter<string>(dataFrame, aes.lineShape),\n        lineColor: createAesGetter<string>(dataFrame, aes.lineColor),\n    };\n}\n\nconst getSteps = (count: number, valueExtent: number[]) => {\n    const min = Math.min(...valueExtent);\n    const max = Math.max(...valueExtent);\n    if (min === max) {\n        const steps = count % 2 === 0 ? [] : [min];\n        for (let i = 1; i < count / 2 + 1; i++) {\n            steps.push(min + i);\n            steps.unshift(min - i);\n        }\n        return steps;\n    }\n    if (count < 2) {\n        return [min, max];\n    }\n    const step = (max - min) / (count - 1);\n    const steps = [];\n    for (let i = 0; i < count - 1; i++) {\n        steps.push(min + step * i);\n    }\n    steps.push(max);\n    return steps;\n};\n\nfunction getCellHeight(leavesCount: number, scale = 1, minHeight?: number, maxHeight?: number) {\n    const valueByNodeCount = (leavesCount < 16 ? 40 : leavesCount < 49 ? 32 : 24) * scale;\n    return Math.max(Math.min(valueByNodeCount, maxHeight ?? Infinity), minHeight ?? -Infinity);\n}\n\nclass ChartRenderer {\n    component: ReactElement = (<></>);\n    reactRoot: Root | null = null;\n    parentNode: HTMLElement | null = null;\n    rootNode: HTMLElement | null = null;\n    chartSizes: ChartSizes = {\n        treeWidth: WIDTH,\n        treeHeight: HEIGHT,\n        heatmapWidth: 0,\n        heatmapHeight: 0,\n        totalWidth: WIDTH + WIDTH + MARGIN.LEFT + MARGIN.RIGHT,\n        totalHeight: HEIGHT + MARGIN.TOP + MARGIN.BOTTOM,\n        labelsOffset: 0,\n        marginLeft: MARGIN.LEFT,\n        marginRight: MARGIN.RIGHT,\n        marginTop: MARGIN.TOP,\n        marginBottom: MARGIN.BOTTOM,\n    };\n\n    legend: LegendData = {width: 0, height: 0, items: []};\n\n    // heatmap scales and step\n    heatmapScales: ChartScales = {\n        x: scaleOrdinal<string, number>().domain(['null']).range([1]),\n        y: scaleOrdinal<string, number>().domain(['null']).range([1]),\n    };\n    heatmapStep: {x: number; y: number} = {x: 0, y: 0};\n    heatmapColorScale: {\n        scale: ScaleLinear<string, string> | ScaleOrdinal<string, string, string>;\n        getter: (v: DataValue) => string;\n    } = {\n        scale: scaleOrdinal([]),\n        getter: () => 'white',\n    };\n    heatmapLabels: string[] = [];\n\n    clear() {\n        if (this.parentNode && this.rootNode) {\n            this.parentNode?.removeChild(this.rootNode);\n            this.parentNode = null;\n            this.rootNode = null;\n        }\n        // timeout to avoid trying to unmount during rendering\n        setTimeout(() => {\n            this.reactRoot?.unmount();\n            this.reactRoot = null;\n        });\n    }\n\n    init(node: HTMLElement) {\n        if (this.parentNode === null) {\n            this.parentNode = node;\n            this.rootNode = document.createElement('div');\n            this.parentNode.appendChild(this.rootNode);\n            this.reactRoot = createRoot(this.rootNode);\n        }\n    }\n\n    updateHeatmapScales(\n        heatmapData: HeatmapData | null,\n        heatmapSettings: DendroSettingsImpl['heatmapSettings'],\n        size: DendroSettingsImpl['chartSettings']['size']\n    ) {\n        if (heatmapData === null) {\n            this.chartSizes.heatmapWidth = 0;\n            return;\n        }\n        const {xKeysByGroups, xGroupKeys, xKeys, yKeys} = heatmapData;\n        const groupGap = 5;\n        // for shared facets max cells counts in group should be used\n        const xCounts = xGroupKeys.map(xGroupKey => xKeysByGroups[xGroupKey].length);\n        const xCellsCount = xCounts.reduce((sum, count) => sum + count, 0);\n        const yStep = this.chartSizes.treeHeight / yKeys.length;\n        const xStep = Math.min(\n            Math.max(\n                (MAX_HEATMAP_WIDTH - (xCounts.filter(count => count > 0).length - 1) * groupGap) / xCellsCount,\n                size.minCellWidth\n            ),\n            size.maxCellWidth\n        );\n\n        const xPositions: number[] = [];\n        let currentX = 0;\n        xGroupKeys.forEach(xKey => {\n            const axisKeys = xKeysByGroups[xKey];\n            axisKeys.forEach(() => {\n                xPositions.push(currentX);\n                currentX += xStep;\n            });\n            // do not add offset for empty group\n            if (axisKeys.length > 0) {\n                currentX += groupGap;\n            }\n        });\n\n        this.heatmapScales.x = scaleOrdinal<string, number>().domain(xKeys).range(xPositions);\n        this.heatmapScales.y = scaleOrdinal<string, number>()\n            .domain(yKeys)\n            .range(yKeys.map((_key, idx) => idx * yStep));\n        this.heatmapStep.x = xStep;\n        this.heatmapStep.y = yStep;\n\n        const {colorsList, colorsMap} = heatmapSettings.aes;\n        if (heatmapSettings.valueType === 'continuous' && colorsList) {\n            const scale = scaleLinear<string, string>()\n                .domain(getSteps(colorsList.length, heatmapData.meta.valueExtent))\n                .range(colorsList);\n            this.heatmapColorScale = {\n                scale,\n                getter: v => scale(v as number),\n            };\n        }\n        if (heatmapSettings.valueType === 'discrete' && colorsMap) {\n            const values = Object.keys(colorsMap).filter(key => heatmapData.meta.uniqueValues.has(key));\n            this.heatmapColorScale = {\n                scale: scaleOrdinal(\n                    values,\n                    values.map(v => colorsMap[v])\n                ).unknown(COLOR_NULL),\n                getter: v => (v ? colorsMap[v] ?? COLOR_NULL : COLOR_NULL),\n            };\n        }\n        if (heatmapSettings.valueType === 'stringSource' && colorsList) {\n            const values = [...heatmapData.meta.uniqueValues];\n            const scale = scaleOrdinal(\n                values,\n                values.map((_v, idx) => colorsList[idx % colorsList.length])\n            ).unknown(COLOR_NULL);\n            this.heatmapColorScale = {\n                scale,\n                getter: v => (v ? scale(v as string) : COLOR_NULL),\n            };\n        }\n\n        this.chartSizes.heatmapWidth =\n            this.heatmapScales.x(heatmapData.xKeys[heatmapData.xKeys.length - 1]) + this.heatmapStep.x;\n    }\n\n    updateLegendSize(\n        legend: DendroSettingsImpl['chartSettings']['legend'],\n        legendLabels: DendroLegendInfo,\n        aes: DendroSettingsImpl['aes'],\n        heatmapAnnotation: DendroSettingsImpl['heatmapAnnotation'],\n        heatmapData: HeatmapData | null,\n        heatmapSettings: DendroSettingsImpl['heatmapSettings']\n    ) {\n        if (!legend.show) {\n            this.legend = {\n                width: 0,\n                height: 0,\n                items: [],\n            };\n            return;\n        }\n        const textMeasurer = new TextMeasurer('600 14px Arial');\n        const LINE_HEIGHT = 16;\n        const GROUP_OFFSET = 48;\n        const TEXT_LEFT_DISCRETE = 20;\n        const COLUMN_OFFSET = 24;\n\n        function getLegendItemWidth(keys: string[], title: string) {\n            return Math.max(\n                ...keys.map(text => textMeasurer.getTextWidth(String(text)) + TEXT_LEFT_DISCRETE),\n                textMeasurer.getTextWidth(title)\n            );\n        }\n\n        const columns: {\n            columnKey: string;\n            data: Record<string, DotAesItem>;\n            values: string[];\n            labels: Record<string, string>;\n        }[] = [];\n\n        const aesGrouping: ColumnName[] = [aes.nodeColor, aes.nodeShape, aes.lineColor]\n            .filter(isCategoricalAes)\n            .map(item => (item as CategoricalAesFromColumn<string>).columnName);\n        aesGrouping.forEach(column => {\n            const info = legendLabels[column.value];\n            if (info.usedAes.length === 0 || !info.aesMap) {\n                return;\n            }\n            const columnKey = column.label ?? column.value;\n            const columnValues = info.values;\n            const aesData: Record<string, DotAesItem> = {};\n            columnValues.forEach(columnValue => {\n                if (!aesData[columnValue]) {\n                    aesData[columnValue] = {...DEFAULT_DOT_AES} as DotAesItem;\n                }\n                info.usedAes.forEach(key => {\n                    if (key === 'dotFill' || key === 'lineColor') {\n                        aesData[columnValue].color = info.aesMap[columnValue]?.[key] ?? BLACK;\n                    }\n                    if (key === 'dotShape') {\n                        aesData[columnValue].shape = info.aesMap[columnValue]?.[key] ?? '21';\n                    }\n                    if (key === 'dotSize') {\n                        aesData[columnValue].size = info.aesMap[columnValue]?.[key] ?? 3;\n                    }\n                });\n            });\n\n            columns.push({\n                columnKey,\n                data: aesData,\n                values: info.values,\n                labels: info.labels,\n            });\n        });\n        const legendItems: LegendItem[] = [];\n        let currentColumnWidth = 0;\n        let currentColumnHeight = 0;\n        let currentLeft = 0;\n        let maxHeight = Math.min(this.chartSizes.treeHeight, MAX_LEGEND_HEIGHT);\n\n        if (heatmapAnnotation && heatmapData) {\n            const type = heatmapSettings.valueType;\n            const title = heatmapAnnotation.label ?? heatmapAnnotation.value;\n            if (type === 'continuous') {\n                const colorScale = this.heatmapColorScale.scale as ScaleLinear<string, string>;\n                const values = getContinuousLegendTicks(colorScale, heatmapData.meta.valueExtent, 4);\n                const width = getContinuousLegendWidth(values, title);\n                const legendItem: LegendItem = {\n                    id: 'heatmapValue',\n                    type: 'continuous',\n                    width,\n                    height: maxHeight,\n                    left: 0,\n                    top: 0,\n                    title,\n                    scale: colorScale,\n                    values,\n                    labels: {},\n                };\n                legendItems.push(legendItem);\n                currentColumnHeight = legendItem.height + GROUP_OFFSET;\n                currentColumnWidth = legendItem.width;\n            } else {\n                const colorScale = this.heatmapColorScale.scale as ScaleOrdinal<string, string>;\n                const width = getDiscreteLegendWidth(colorScale, title);\n                const values = colorScale.domain();\n                const height = values.length * LINE_HEIGHT;\n                const legendItem: LegendItem = {\n                    id: 'heatmapValue',\n                    type: 'discrete',\n                    width,\n                    height,\n                    left: 0,\n                    top: 0,\n                    title,\n                    scale: colorScale,\n                    values,\n                    labels: {},\n                };\n                legendItems.push(legendItem);\n                currentColumnHeight = legendItem.height + GROUP_OFFSET;\n                currentColumnWidth = legendItem.width;\n            }\n        }\n\n        columns.map(({columnKey, labels, values, data}) => {\n            if (currentColumnHeight > maxHeight) {\n                currentColumnHeight = 0;\n                currentLeft += currentColumnWidth + COLUMN_OFFSET;\n            }\n            const title = columnKey;\n            const width = getLegendItemWidth(\n                values.map(v => labels[v]),\n                title\n            );\n            const height = values.length * LINE_HEIGHT;\n            if (height > maxHeight) {\n                maxHeight = height;\n            }\n            const scale = scaleOrdinal<DotAesItem>()\n                .domain(values)\n                .range(values.map(value => data[value]));\n            const left = currentLeft;\n            const top = currentColumnHeight;\n            legendItems.push({id: columnKey, type: 'nodes', width, height, left, top, title, scale, values, labels});\n            currentColumnWidth = width;\n            currentColumnHeight += height + GROUP_OFFSET;\n        });\n\n        if (isContinuousAes(aes.nodeSize)) {\n            if (currentColumnHeight > maxHeight) {\n                currentColumnHeight = 0;\n                currentLeft += currentColumnWidth + COLUMN_OFFSET;\n            }\n            const {columnName, domain, range} = aes.nodeSize;\n            const title = columnName.label ?? columnName.value;\n            const scale = scaleSqrt(domain, range);\n            const values = scale.ticks(3);\n            const format = scale.tickFormat(3);\n            const labels = values.reduce((res: Record<string, string>, v) => {\n                res[String(v)] = format(v);\n                return res;\n            }, {});\n            const width = getLegendItemWidth(\n                values.map(v => labels[v]),\n                title\n            );\n            const height = (scale(Math.max(...values)) * 2 + 4) * values.length;\n            if (height > maxHeight) {\n                maxHeight = height;\n            }\n            const left = currentLeft;\n            const top = currentColumnHeight;\n            legendItems.push({id: columnName.value, type: 'size', width, height, left, top, title, scale, values, labels});\n            currentColumnWidth = width;\n            currentColumnHeight += height + GROUP_OFFSET;\n        }\n\n        const legendWidth = currentLeft + currentColumnWidth + 2 * LEGEND_OFFSET;\n        const legendHeight = maxHeight;\n\n        this.legend = {\n            width: legendWidth,\n            height: legendHeight,\n            items: legendItems,\n        };\n    }\n\n    updateChartSizes(\n        size: DendroSettingsImpl['chartSettings']['size'],\n        heatmapData: HeatmapData | null,\n        hierarchy: HierarchyNode<TreeNodeData>\n    ) {\n        const leavesCount = hierarchy.leaves().length;\n        this.chartSizes.treeWidth = heatmapData ? size.width / 2 : size.width;\n\n        const height = getCellHeight(leavesCount, size.scale, size.minCellHeight, size.maxCellHeight) * leavesCount;\n\n        this.chartSizes.treeHeight = height;\n        this.chartSizes.heatmapHeight = height;\n        this.chartSizes.marginLeft = size.marginLeft;\n        this.chartSizes.marginRight = size.marginRight;\n        this.chartSizes.marginBottom = size.marginBottom;\n        this.chartSizes.marginTop = size.marginTop;\n    }\n\n    updateTotalSizes(heatmapData: HeatmapData | null) {\n        this.chartSizes.totalWidth =\n            this.chartSizes.treeWidth + this.chartSizes.heatmapWidth + this.legend.width + this.chartSizes.marginLeft + this.chartSizes.marginRight;\n        if (heatmapData) {\n            this.chartSizes.totalWidth += HEATMAP_LEFT_OFFSET;\n        }\n        if (this.legend.width > 0) {\n            this.chartSizes.totalWidth += HEATMAP_LEFT_OFFSET;\n        }\n\n        this.chartSizes.totalHeight =\n            Math.max(this.chartSizes.treeHeight, this.legend.height) + this.chartSizes.marginTop + this.chartSizes.marginBottom;\n    }\n\n    prepareTableLabels(heatmapData: HeatmapData | null) {\n        const textMeasurer = new TextMeasurer('bold 14px Arial');\n        const ELLIPSIS = '…';\n\n        if (this.heatmapStep.x < 12 || !heatmapData) {\n            this.heatmapLabels = [];\n            return;\n        }\n\n        const limit = this.heatmapStep.x - 4;\n\n        this.heatmapLabels = heatmapData.xKeys.map(x => {\n            const label = heatmapData.meta.xLabels[x];\n            let size = textMeasurer.getTextWidth(label);\n            if (size < limit) {\n                return label;\n            }\n            let curLabel = label;\n            let letters = curLabel?.length;\n            while (size > limit && letters > 0) {\n                letters--;\n                curLabel = label?.substring(0, letters) + ELLIPSIS;\n                size = textMeasurer.getTextWidth(curLabel);\n            }\n\n            return letters > 0 ? curLabel : '';\n        });\n    }\n\n    addLabelsWidthToTreeArea(root: HierarchyPointNode<TreeNodeData>, showLeavesLabels: boolean) {\n        if (!showLeavesLabels) {\n            return;\n        }\n        const leaves = root.leaves();\n        const textMeasurer = new TextMeasurer('bold 14px Manrope');\n\n        let offset = 0;\n        leaves.forEach(node => {\n            if (!node.data.label) {\n                return;\n            }\n            const size = textMeasurer.getTextWidth(node.data.label);\n            const diff = node.y + size - this.chartSizes.treeWidth + 8; // 8 - offset between point center and label\n            if (diff > offset) {\n                offset = diff;\n            }\n        });\n\n        this.chartSizes.treeWidth += offset;\n    }\n\n    render(\n        dataFrame: DataFrame,\n        chartSettings: DendroSettingsImpl['chartSettings'],\n        hierarchy: HierarchyNode<TreeNodeData>,\n        connectionType: DendroSettingsImpl['connectionType'],\n        rootPosition: DendroSettingsImpl['rootPosition'],\n        edgeInheritance: DendroSettingsImpl['edgeInheritance'],\n        showNodes: DendroSettingsImpl['showNodes'],\n        showEdges: DendroSettingsImpl['showEdges'],\n        showLeavesLabels: DendroSettingsImpl['showLeavesLabels'],\n        showNodesLabels: DendroSettingsImpl['showNodesLabels'],\n        aes: DendroSettingsImpl['aes'],\n        labels: DendroSettingsImpl['labels'],\n        heatmapAnnotation: DendroSettingsImpl['heatmapAnnotation'],\n        heatmapData: HeatmapData | null,\n        heatmapSettings: DendroSettingsImpl['heatmapSettings'],\n        legendLabels: DendroLegendInfo,\n        leavesMode: DendroSettingsImpl['leavesMode'],\n        onClick: (data: ClickEventData) => void\n    ) {\n        this.updateChartSizes(chartSettings.size, heatmapData, hierarchy);\n        this.updateHeatmapScales(heatmapData, heatmapSettings, chartSettings.size);\n        this.updateLegendSize(chartSettings.legend, legendLabels, aes, heatmapAnnotation, heatmapData, heatmapSettings);\n        this.prepareTableLabels(heatmapData);\n\n        const clusterSize: [number, number] =\n            rootPosition === 'top'\n                ? 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package/dist/dendro/DendroSettingsImpl.d.ts

@@ -10,6 +10,10 @@ export declare class DendroSettingsImpl implements SettingsInterface {
             maxCellWidth: number;
             minCellHeight?: number;
             maxCellHeight?: number;
+            marginTop: number;
+            marginBottom: number;
+            marginLeft: number;
+            marginRight: number;
         };
         readonly title: {
             name: string;
@@ -23,6 +27,7 @@ export declare class DendroSettingsImpl implements SettingsInterface {
     };
     readonly mode: 'normal' | 'useAllNodesAsLeaves';
     readonly leavesMode: 'normal' | 'alignLeavesToLine';
+    readonly leavesOrder: 'indexAsc' | 'indexDesc' | null;
     readonly id: ColumnName;
     readonly parentId: ColumnName;
     readonly height: ColumnName | null;

package/dist/dendro/DendroSettingsImpl.d.ts.map

@@ -1 +1 @@
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package/dist/dendro/DendroSettingsImpl.js

@@ -1,79 +1,84 @@
-var u = Object.defineProperty;
-var n = (a, e, h) => e in a ? u(a, e, { enumerable: !0, configurable: !0, writable: !0, value: h }) : a[e] = h;
-var o = (a, e, h) => n(a, typeof e != "symbol" ? e + "" : e, h);
-import { BLACK as w, DEFAULT_HEIGHT_SMALL as I, DEFAULT_HEIGHT as S, DEFAULT_WIDTH_SMALL as T } from "../constants.js";
-import { CELL_MAX_WIDTH as A, CELL_MIN_WIDTH as C, WIDE_TREE_WIDTH as E } from "./constants.js";
+var C = Object.defineProperty;
+var z = (h, o, a) => o in h ? C(h, o, { enumerable: !0, configurable: !0, writable: !0, value: a }) : h[o] = a;
+var e = (h, o, a) => z(h, typeof o != "symbol" ? o + "" : o, a);
+import { BLACK as E, DEFAULT_HEIGHT_SMALL as D, DEFAULT_HEIGHT as H, DEFAULT_WIDTH_SMALL as v } from "../constants.js";
+import { MARGIN as l, CELL_MAX_WIDTH as b, CELL_MIN_WIDTH as _, WIDE_TREE_WIDTH as N } from "./constants.js";
 import "../types/common.js";
 import "../types/discrete.js";
 import "../types/scatterplot.js";
 import "../types/heatmap.js";
-import { DendroSettingsSchema as D } from "../types/dendro.js";
+import { DendroSettingsSchema as M } from "../types/dendro.js";
 import "../types/histogram.js";
 import "../types/bubble.js";
-class F {
-  constructor(e) {
-    o(this, "type", "dendro");
-    o(this, "chartSettings");
-    o(this, "mode");
-    o(this, "leavesMode");
-    o(this, "id");
-    o(this, "parentId");
-    o(this, "height", null);
+class B {
+  constructor(o) {
+    e(this, "type", "dendro");
+    e(this, "chartSettings");
+    e(this, "mode");
+    e(this, "leavesMode");
+    e(this, "leavesOrder");
+    e(this, "id");
+    e(this, "parentId");
+    e(this, "height", null);
     // if height is not defined it is not considered in links length calculations
-    o(this, "labels");
-    o(this, "heatmapAnnotation");
-    o(this, "heatmapAxis");
-    o(this, "heatmapGroup");
-    o(this, "heatmapSettings");
-    o(this, "connectionType", "rectangle");
-    o(this, "edgeInheritance", "up");
-    o(this, "rootPosition", "top");
-    o(this, "showNodes", !0);
-    o(this, "showEdges", !0);
-    o(this, "showLeavesLabels", !0);
-    o(this, "showNodesLabels", !0);
-    o(this, "aes", {
+    e(this, "labels");
+    e(this, "heatmapAnnotation");
+    e(this, "heatmapAxis");
+    e(this, "heatmapGroup");
+    e(this, "heatmapSettings");
+    e(this, "connectionType", "rectangle");
+    e(this, "edgeInheritance", "up");
+    e(this, "rootPosition", "top");
+    e(this, "showNodes", !0);
+    e(this, "showEdges", !0);
+    e(this, "showLeavesLabels", !0);
+    e(this, "showNodesLabels", !0);
+    e(this, "aes", {
       nodeShape: "21",
-      nodeColor: w,
+      nodeColor: E,
       nodeSize: 3,
       lineShape: "solid",
-      lineColor: w
+      lineColor: E
     });
-    var h, l, i, r, d, p, m, c, L, t;
-    D.parse(e), this.chartSettings = {
+    var a, r, m, d, i, p, L, c, T, u, w, I, S, A;
+    M.parse(o), this.chartSettings = {
       size: {
-        width: ((h = e == null ? void 0 : e.size) == null ? void 0 : h.width) ?? (e.facetSettings ? T : E),
-        height: ((l = e == null ? void 0 : e.size) == null ? void 0 : l.height) ?? (e.facetSettings ? I : S),
-        scale: ((i = e == null ? void 0 : e.size) == null ? void 0 : i.scale) ?? 1,
-        minCellWidth: ((r = e == null ? void 0 : e.size) == null ? void 0 : r.minCellWidth) ?? C,
-        maxCellWidth: ((d = e == null ? void 0 : e.size) == null ? void 0 : d.maxCellWidth) ?? A,
-        minCellHeight: (p = e == null ? void 0 : e.size) == null ? void 0 : p.minCellHeight,
-        maxCellHeight: (m = e == null ? void 0 : e.size) == null ? void 0 : m.maxCellHeight
+        width: ((a = o == null ? void 0 : o.size) == null ? void 0 : a.width) ?? (o.facetSettings ? v : N),
+        height: ((r = o == null ? void 0 : o.size) == null ? void 0 : r.height) ?? (o.facetSettings ? D : H),
+        scale: ((m = o == null ? void 0 : o.size) == null ? void 0 : m.scale) ?? 1,
+        minCellWidth: ((d = o == null ? void 0 : o.size) == null ? void 0 : d.minCellWidth) ?? _,
+        maxCellWidth: ((i = o == null ? void 0 : o.size) == null ? void 0 : i.maxCellWidth) ?? b,
+        minCellHeight: (p = o == null ? void 0 : o.size) == null ? void 0 : p.minCellHeight,
+        maxCellHeight: (L = o == null ? void 0 : o.size) == null ? void 0 : L.maxCellHeight,
+        marginTop: ((c = o == null ? void 0 : o.size) == null ? void 0 : c.marginTop) ?? l.TOP,
+        marginBottom: ((T = o == null ? void 0 : o.size) == null ? void 0 : T.marginBottom) ?? l.BOTTOM,
+        marginLeft: ((u = o == null ? void 0 : o.size) == null ? void 0 : u.marginLeft) ?? l.LEFT,
+        marginRight: ((w = o == null ? void 0 : o.size) == null ? void 0 : w.marginRight) ?? l.RIGHT
       },
       title: {
         position: "center",
         show: !0,
-        ...e.title,
-        name: ((c = e.title) == null ? void 0 : c.name) ?? "Dendrogram"
+        ...o.title,
+        name: ((I = o.title) == null ? void 0 : I.name) ?? "Dendrogram"
       },
       legend: {
         show: !0,
         position: "right",
-        ...e.legend
+        ...o.legend
       }
-    }, this.mode = e.mode ?? "normal", this.leavesMode = e.leavesMode ?? "normal", this.id = e.id, this.parentId = e.parentId, this.height = e.height ?? null, this.labels = e.labels ?? this.id, this.heatmapAnnotation = e.heatmapAnnotation ?? null, this.heatmapAxis = e.heatmapAxis ?? null, this.heatmapGroup = e.heatmapGroup ?? [], this.heatmapSettings = {
-      valueType: ((L = e.heatmapSettings) == null ? void 0 : L.valueType) ?? "continuous",
+    }, this.mode = o.mode ?? "normal", this.leavesMode = o.leavesMode ?? "normal", this.leavesOrder = o.leavesOrder ?? null, this.id = o.id, this.parentId = o.parentId, this.height = o.height ?? null, this.labels = o.labels ?? this.id, this.heatmapAnnotation = o.heatmapAnnotation ?? null, this.heatmapAxis = o.heatmapAxis ?? null, this.heatmapGroup = o.heatmapGroup ?? [], this.heatmapSettings = {
+      valueType: ((S = o.heatmapSettings) == null ? void 0 : S.valueType) ?? "continuous",
       aes: {
         colorsList: ["#FFF680", "#53D788", "#36739D", "#4A005C"],
-        ...(t = e.heatmapSettings) == null ? void 0 : t.aes
+        ...(A = o.heatmapSettings) == null ? void 0 : A.aes
       }
-    }, this.connectionType = e.connectionType ?? this.connectionType, this.edgeInheritance = e.edgeInheritance ?? this.edgeInheritance, this.showNodes = e.showNodes ?? this.showNodes, this.showEdges = e.showEdges ?? this.showEdges, this.showLeavesLabels = e.showLeavesLabels ?? this.showLeavesLabels, this.showNodesLabels = e.showNodesLabels ?? this.showNodesLabels, this.rootPosition = e.rootPosition ?? this.rootPosition, this.aes = {
+    }, this.connectionType = o.connectionType ?? this.connectionType, this.edgeInheritance = o.edgeInheritance ?? this.edgeInheritance, this.showNodes = o.showNodes ?? this.showNodes, this.showEdges = o.showEdges ?? this.showEdges, this.showLeavesLabels = o.showLeavesLabels ?? this.showLeavesLabels, this.showNodesLabels = o.showNodesLabels ?? this.showNodesLabels, this.rootPosition = o.rootPosition ?? this.rootPosition, this.aes = {
       ...this.aes,
-      ...e.aes
+      ...o.aes
     };
   }
 }
 export {
-  F as DendroSettingsImpl
+  B as DendroSettingsImpl
 };
 //# sourceMappingURL=DendroSettingsImpl.js.map

package/dist/dendro/DendroSettingsImpl.js.map

@@ -1 +1 @@
-{"version":3,"file":"DendroSettingsImpl.js","sources":["../../src/dendro/DendroSettingsImpl.ts"],"sourcesContent":["import {BLACK, DEFAULT_HEIGHT, DEFAULT_HEIGHT_SMALL, DEFAULT_WIDTH_SMALL} from '../constants';\nimport {CELL_MAX_WIDTH, CELL_MIN_WIDTH, WIDE_TREE_WIDTH} from './constants';\nimport type {\n    CategoricalAesFromColumn,\n    ColumnName,\n    ContinuousAesFromColumn,\n    DendroSettings,\n    LegendPosition,\n    LineShape,\n    PointShape,\n    SettingsInterface,\n    TitlePosition,\n} from '../types';\nimport {DendroSettingsSchema} from '../types';\n\nexport class DendroSettingsImpl implements SettingsInterface {\n    readonly type = 'dendro';\n    readonly chartSettings: {\n        readonly size: {\n            width: number;\n            height: number;\n            scale: number;\n            minCellWidth: number;\n            maxCellWidth: number;\n            minCellHeight?: number;\n            maxCellHeight?: number;\n        };\n        readonly title: {name: string; show: boolean; position: TitlePosition};\n        readonly legend: {show: boolean; position: LegendPosition};\n    };\n    readonly mode: 'normal' | 'useAllNodesAsLeaves';\n    readonly leavesMode: 'normal' | 'alignLeavesToLine';\n    readonly id: ColumnName;\n    readonly parentId: ColumnName;\n    readonly height: ColumnName | null = null; // if height is not defined it is not considered in links length calculations\n    readonly labels: ColumnName;\n\n    readonly heatmapAnnotation: ColumnName | null;\n    readonly heatmapAxis: ColumnName | null;\n    readonly heatmapGroup: ColumnName[];\n\n    readonly heatmapSettings: {\n        valueType: 'discrete' | 'continuous' | 'stringSource';\n        aes: {\n            colorsList?: string[];\n            colorsMap?: Record<string, string>;\n        };\n    };\n\n    readonly connectionType: 'rectangle' | 'line' | 'curve' = 'rectangle';\n    readonly edgeInheritance: 'up' | 'down' = 'up';\n    readonly rootPosition: 'left' | 'top' = 'top';\n    readonly showNodes: boolean = true;\n    readonly showEdges: boolean = true;\n    readonly showLeavesLabels: boolean = true;\n    readonly showNodesLabels: boolean = true;\n\n    readonly aes: {\n        readonly nodeShape: PointShape | CategoricalAesFromColumn<PointShape>;\n        readonly nodeColor: string | CategoricalAesFromColumn<string> | ContinuousAesFromColumn<string>;\n        readonly nodeSize: number | CategoricalAesFromColumn<number> | ContinuousAesFromColumn<number>;\n\n        readonly lineShape: LineShape;\n        readonly lineColor: string | CategoricalAesFromColumn<string> | ContinuousAesFromColumn<string>;\n    } = {\n        nodeShape: '21',\n        nodeColor: BLACK,\n        nodeSize: 3,\n        lineShape: 'solid',\n        lineColor: BLACK,\n    };\n\n    constructor(settings: DendroSettings) {\n        DendroSettingsSchema.parse(settings);\n        this.chartSettings = {\n            size: {\n                width: settings?.size?.width ?? 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'normal';\n\n        this.id = settings.id;\n        this.parentId = settings.parentId;\n        this.height = settings.height ?? null;\n        this.labels = settings.labels ?? this.id;\n        // for heatmap\n        this.heatmapAnnotation = settings.heatmapAnnotation ?? null;\n        this.heatmapAxis = settings.heatmapAxis ?? null;\n        this.heatmapGroup = settings.heatmapGroup ?? [];\n        this.heatmapSettings = {\n            valueType: settings.heatmapSettings?.valueType ?? 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+{"version":3,"file":"DendroSettingsImpl.js","sources":["../../src/dendro/DendroSettingsImpl.ts"],"sourcesContent":["import { BLACK, DEFAULT_HEIGHT, DEFAULT_HEIGHT_SMALL, DEFAULT_WIDTH_SMALL } from '../constants';\nimport { CELL_MAX_WIDTH, CELL_MIN_WIDTH, MARGIN, WIDE_TREE_WIDTH } from './constants';\nimport type {\n    CategoricalAesFromColumn,\n    ColumnName,\n    ContinuousAesFromColumn,\n    DendroSettings,\n    LegendPosition,\n    LineShape,\n    PointShape,\n    SettingsInterface,\n    TitlePosition,\n} from '../types';\nimport { DendroSettingsSchema } from '../types';\n\nexport class DendroSettingsImpl implements SettingsInterface {\n    readonly type = 'dendro';\n    readonly chartSettings: {\n        readonly size: {\n            width: number;\n            height: number;\n            scale: number;\n            minCellWidth: number;\n            maxCellWidth: number;\n            minCellHeight?: number;\n            maxCellHeight?: number;\n            marginTop: number;\n            marginBottom: number;\n            marginLeft: number;\n            marginRight: number;\n        };\n        readonly title: { name: string; show: boolean; position: TitlePosition };\n        readonly legend: { show: boolean; position: LegendPosition };\n    };\n    readonly mode: 'normal' | 'useAllNodesAsLeaves';\n    readonly leavesMode: 'normal' | 'alignLeavesToLine';\n    readonly leavesOrder: 'indexAsc' | 'indexDesc' | null;\n    readonly id: ColumnName;\n    readonly parentId: ColumnName;\n    readonly height: ColumnName | null = null; // if height is not defined it is not considered in links length calculations\n    readonly labels: ColumnName;\n\n    readonly heatmapAnnotation: ColumnName | null;\n    readonly heatmapAxis: ColumnName | null;\n    readonly heatmapGroup: ColumnName[];\n\n    readonly heatmapSettings: {\n        valueType: 'discrete' | 'continuous' | 'stringSource';\n        aes: {\n            colorsList?: string[];\n            colorsMap?: Record<string, string>;\n        };\n    };\n\n    readonly connectionType: 'rectangle' | 'line' | 'curve' = 'rectangle';\n    readonly edgeInheritance: 'up' | 'down' = 'up';\n    readonly rootPosition: 'left' | 'top' = 'top';\n    readonly showNodes: boolean = true;\n    readonly showEdges: boolean = true;\n    readonly showLeavesLabels: boolean = true;\n    readonly showNodesLabels: boolean = true;\n\n    readonly aes: {\n        readonly nodeShape: PointShape | CategoricalAesFromColumn<PointShape>;\n        readonly nodeColor: string | CategoricalAesFromColumn<string> | ContinuousAesFromColumn<string>;\n        readonly nodeSize: number | CategoricalAesFromColumn<number> | ContinuousAesFromColumn<number>;\n\n        readonly lineShape: LineShape;\n        readonly lineColor: string | CategoricalAesFromColumn<string> | ContinuousAesFromColumn<string>;\n    } = {\n            nodeShape: '21',\n            nodeColor: BLACK,\n            nodeSize: 3,\n            lineShape: 'solid',\n            lineColor: BLACK,\n        };\n\n    constructor(settings: DendroSettings) {\n        DendroSettingsSchema.parse(settings);\n        this.chartSettings = {\n            size: {\n                width: settings?.size?.width ?? 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package/dist/dendro/components/Chart.js

@@ -1,53 +1,53 @@
 import { j as e } from "../../node_modules/react/jsx-runtime.js";
-import L, { r as d } from "../../_virtual/index.js";
-import q from "../../common/fonts.js";
-import { USER_UPDATE_EVENT as F, MARGIN as R, DIMMED_OPACITY as J, HEATMAP_LEFT_OFFSET as m } from "../constants.js";
-import { Heatmap as K } from "./Heatmap.js";
-import { Legend as Q } from "./Legend.js";
-import { LinksGroup as $ } from "./LinksGroup.js";
-import { NodesGroup as A } from "./NodesGroup.js";
+import T, { r as d } from "../../_virtual/index.js";
+import Y from "../../common/fonts.js";
+import { USER_UPDATE_EVENT as F, DIMMED_OPACITY as q, HEATMAP_LEFT_OFFSET as m } from "../constants.js";
+import { Heatmap as J } from "./Heatmap.js";
+import { Legend as K } from "./Legend.js";
+import { LinksGroup as R } from "./LinksGroup.js";
+import { NodesGroup as $ } from "./NodesGroup.js";
 function C(l) {
   if (!l)
     return null;
-  const r = /* @__PURE__ */ new Set();
+  const n = /* @__PURE__ */ new Set();
   let s = l;
   for (; s; )
-    r.add(s.id), s = s.parent;
-  return r;
+    n.add(s.id), s = s.parent;
+  return n;
 }
-function lt({
+function ot({
   chartSettings: l,
-  chartSizes: r,
+  chartSizes: n,
   nodes: s,
   links: p,
-  connectionType: I,
+  connectionType: W,
   rootPosition: x,
-  edgeInheritance: M,
-  showNodes: h,
+  edgeInheritance: _,
+  showNodes: g,
   showEdges: j,
-  showLeavesLabels: O,
-  showNodesLabels: S,
-  aesGetters: E,
-  labels: W,
-  heatmapData: g,
-  heatmapScales: _,
-  heatmapStep: H,
-  heatmapColor: N,
-  heatmapLabels: P,
-  legendData: y,
-  onClick: U
+  showLeavesLabels: A,
+  showNodesLabels: H,
+  aesGetters: h,
+  labels: I,
+  heatmapData: E,
+  heatmapScales: M,
+  heatmapStep: O,
+  heatmapColor: y,
+  heatmapLabels: N,
+  legendData: P,
+  onClick: S
 }) {
-  const b = d.useRef(null), [D, G] = d.useState(null), c = d.useRef(null);
+  const U = d.useRef(null), [b, D] = d.useState(null), c = d.useRef(null);
   d.useEffect(() => {
-    c.current && G(c.current);
+    c.current && D(c.current);
     function t() {
       u(null), f(null);
     }
     function o(i) {
-      Object.entries(i.detail).forEach(([B, V]) => {
+      Object.entries(i.detail).forEach(([B, G]) => {
         if (B === "selectedNode") {
-          const w = s.find((Y) => Y.data.rawIndexes[0] === V) ?? null;
-          u(C(w)), f(w);
+          const L = s.find((V) => V.data.rawIndexes[0] === G) ?? null;
+          u(C(L)), f(L);
         }
       });
     }
@@ -55,18 +55,18 @@ function lt({
       document.removeEventListener("click", t), document.removeEventListener(F, o);
     };
   }, []);
-  const [n, u] = L.useState(null), [a, f] = L.useState(null), v = n !== null, T = {
-    connectionType: I,
+  const [r, u] = T.useState(null), [a, f] = T.useState(null), v = r !== null, k = {
+    connectionType: W,
     rootPosition: x,
-    edgeInheritance: M,
-    aesGetters: E
-  }, k = {
+    edgeInheritance: _,
+    aesGetters: h
+  }, w = {
     rootPosition: x,
-    showLeavesLabels: O,
-    showNodesLabels: S,
-    aesGetters: E,
-    labels: W,
-    onClick: U,
+    showLeavesLabels: A,
+    showNodesLabels: H,
+    aesGetters: h,
+    labels: I,
+    onClick: S,
     selectedNodeId: a == null ? void 0 : a.id,
     onSelectedUpdate: (t) => {
       u(C(t)), f(t);
@@ -76,72 +76,72 @@ function lt({
     "svg",
     {
       xmlns: "http://www.w3.org/2000/svg",
-      viewBox: `0 0 ${r.totalWidth} ${r.totalHeight}`,
-      ref: b,
-      width: r.totalWidth,
-      height: r.totalHeight,
+      viewBox: `0 0 ${n.totalWidth} ${n.totalHeight}`,
+      ref: U,
+      width: n.totalWidth,
+      height: n.totalHeight,
       children: [
-        /* @__PURE__ */ e.jsx("defs", { children: q }),
-        /* @__PURE__ */ e.jsxs("g", { transform: `translate(${R.LEFT},${R.TOP})`, fontFamily: "Manrope", children: [
+        /* @__PURE__ */ e.jsx("defs", { children: Y }),
+        /* @__PURE__ */ e.jsxs("g", { transform: `translate(${n.marginLeft},${n.marginTop})`, fontFamily: "Manrope", children: [
           /* @__PURE__ */ e.jsx("text", { x: "0", y: "-12", fontSize: "20", children: l.title.name }),
-          /* @__PURE__ */ e.jsxs("g", { opacity: v ? J : 1, children: [
+          /* @__PURE__ */ e.jsxs("g", { opacity: v ? q : 1, children: [
             j && /* @__PURE__ */ e.jsx(
-              $,
+              R,
               {
                 links: p.filter((t) => {
                   const { source: o, target: i } = t;
-                  return !n || !(n.has(o.id ?? "") && n.has(i.id ?? ""));
+                  return !r || !(r.has(o.id ?? "") && r.has(i.id ?? ""));
                 }),
                 selected: !1,
-                ...T
+                ...k
               }
             ),
-            h && /* @__PURE__ */ e.jsx(
-              A,
+            g && /* @__PURE__ */ e.jsx(
+              $,
               {
-                nodes: s.filter((t) => !t.data.isFake && !(n != null && n.has(t.id ?? ""))),
-                ...k
+                nodes: s.filter((t) => !t.data.isFake && !(r != null && r.has(t.id ?? ""))),
+                ...w
               }
             )
           ] }),
           v && /* @__PURE__ */ e.jsxs("g", { children: [
             j && /* @__PURE__ */ e.jsx(
-              $,
+              R,
               {
                 links: p.filter((t) => {
                   const { source: o, target: i } = t;
-                  return n.has(o.id ?? "") && n.has(i.id ?? "");
+                  return r.has(o.id ?? "") && r.has(i.id ?? "");
                 }),
                 selected: !0,
-                ...T
+                ...k
               }
             ),
-            h && /* @__PURE__ */ e.jsx(
-              A,
+            g && /* @__PURE__ */ e.jsx(
+              $,
               {
-                nodes: s.filter((t) => !t.data.isFake && (n == null ? void 0 : n.has(t.id ?? ""))),
-                ...k
+                nodes: s.filter((t) => !t.data.isFake && (r == null ? void 0 : r.has(t.id ?? ""))),
+                ...w
               }
             )
           ] }),
-          g !== null && /* @__PURE__ */ e.jsx("g", { transform: `translate(${r.treeWidth + m},0)`, children: /* @__PURE__ */ e.jsx(
-            K,
+          E !== null && /* @__PURE__ */ e.jsx("g", { transform: `translate(${n.treeWidth + m},0)`, children: /* @__PURE__ */ e.jsx(
+            J,
             {
-              heatmapData: g,
-              scales: _,
-              step: H,
-              colorScale: N,
-              chartSizes: r,
-              labels: P,
+              heatmapData: E,
+              scales: M,
+              step: O,
+              colorScale: y,
+              chartSizes: n,
+              labels: N,
               selectedNode: a,
-              tooltipsContainer: D
+              tooltipsContainer: b
             }
           ) }),
           l.legend.show && /* @__PURE__ */ e.jsx(
             "g",
             {
-              transform: `translate(${r.treeWidth + m + r.heatmapWidth + m},0)`,
-              children: /* @__PURE__ */ e.jsx(Q, { legendData: y })
+              transform: `translate(${n.treeWidth + m + n.heatmapWidth + m},0)`,
+              children: /* @__PURE__ */ e.jsx(K, { legendData: P })
             }
           )
         ] }),
@@ -151,6 +151,6 @@ function lt({
   );
 }
 export {
-  lt as Chart
+  ot as Chart
 };
 //# sourceMappingURL=Chart.js.map