@milaboratories/miplots4 1.0.133 → 1.0.135

package/dist/discrete/DiscreteSettingsImpl.js

@@ -1,21 +1,21 @@
 var S = Object.defineProperty;
 var x = (o, i, t) => i in o ? S(o, i, { enumerable: !0, configurable: !0, writable: !0, value: t }) : o[i] = t;
 var e = (o, i, t) => x(o, typeof i != "symbol" ? i + "" : i, t);
-import { DEFAULT_HEIGHT_SMALL as b, DEFAULT_HEIGHT as v, DEFAULT_WIDTH_SMALL as E, DEFAULT_WIDTH as F, BLACK as n } from "../constants.js";
+import { DEFAULT_HEIGHT_SMALL as b, DEFAULT_HEIGHT as k, DEFAULT_WIDTH_SMALL as z, DEFAULT_WIDTH as E, BLACK as n } from "../constants.js";
 import "../types/common.js";
-import { DiscreteSettingsSchema as k } from "../types/discrete.js";
+import { DiscreteSettingsSchema as F } from "../types/discrete.js";
 import "../types/scatterplot.js";
 import "../types/heatmap.js";
 import "../types/dendro.js";
 import "../types/histogram.js";
 import "../types/bubble.js";
-import { PADDINGS as D, MIN_MARGIN as O } from "./constants.js";
-import T from "../node_modules/lodash/lodash.js";
-import { exhaustive as z } from "../utils/index.js";
-const c = "#3e9838", u = "21", h = 3;
-class a {
+import { PADDINGS as v, MIN_MARGIN as B } from "./constants.js";
+import O from "../node_modules/lodash/lodash.js";
+import { exhaustive as D } from "../utils/index.js";
+const u = "#3e9838", h = "21", p = 3;
+class r {
 }
-class L extends a {
+class T extends r {
   constructor(t) {
     super();
     e(this, "type", "box");
@@ -28,11 +28,11 @@ class L extends a {
     e(this, "aes", {
       showOutliers: !0,
       boxWidth: "auto",
-      dotShape: u,
+      dotShape: h,
       dotFill: n,
-      dotSize: h,
+      dotSize: p,
       lineColor: n,
-      fillColor: c,
+      fillColor: u,
       lineWidth: 1,
       lineShape: "solid",
       opacity: 1
@@ -46,10 +46,10 @@ class L extends a {
     };
   }
   isEqualForCalculation(t) {
-    return t.type === "box" && Object.keys(this.stat).every((r) => this.stat[r] === t.stat[r]);
+    return t.type === "box" && Object.keys(this.stat).every((a) => this.stat[a] === t.stat[a]);
   }
 }
-class B extends a {
+class A extends r {
   constructor(t) {
     super();
     e(this, "type", "violin");
@@ -61,7 +61,7 @@ class B extends a {
     e(this, "aes", {
       width: "auto",
       lineColor: n,
-      fillColor: c,
+      fillColor: u,
       lineWidth: 1,
       lineShape: "solid",
       opacity: 1,
@@ -81,7 +81,7 @@ class B extends a {
     return t.type === "violin" && (this.stat.bandwidth !== t.stat.bandwidth || this.stat.trim !== t.stat.trim || this.stat.stepsCount !== t.stat.stepsCount);
   }
 }
-class G extends a {
+class G extends r {
   constructor(t) {
     super();
     e(this, "type", "dot");
@@ -90,8 +90,8 @@ class G extends a {
       jitter: 0.8,
       lineColor: "none",
       dotFill: n,
-      dotShape: u,
-      dotSize: h,
+      dotShape: h,
+      dotSize: p,
       opacity: 1
     });
     this.aes = {
@@ -103,7 +103,7 @@ class G extends a {
     return t.type === "dot" && this.aes.showOutliers === t.aes.showOutliers;
   }
 }
-class A extends a {
+class L extends r {
   constructor(t) {
     super();
     e(this, "type", "line");
@@ -114,8 +114,8 @@ class A extends a {
       lineShape: "solid",
       fillColor: "none",
       lineColor: n,
-      dotShape: u,
-      dotSize: h,
+      dotShape: h,
+      dotSize: p,
       opacity: 1
     });
     this.pointsValues = t.pointsValues, this.aes = {
@@ -127,7 +127,7 @@ class A extends a {
     return t.type === "line" && this.pointsValues === t.pointsValues;
   }
 }
-class q extends a {
+class q extends r {
   constructor(t) {
     super();
     e(this, "type", "errorbar");
@@ -139,8 +139,8 @@ class q extends a {
       lineWidth: 1,
       fillColor: "none",
       lineColor: n,
-      dotShape: u,
-      dotSize: h,
+      dotShape: h,
+      dotSize: p,
       opacity: 1
     });
     this.pointsValues = t.pointsValues, this.interval = t.interval, this.aes = {
@@ -152,7 +152,7 @@ class q extends a {
     return t.type === "errorbar" && this.pointsValues === t.pointsValues && this.interval === t.interval;
   }
 }
-class P extends a {
+class W extends r {
   constructor(t) {
     super();
     e(this, "type", "bar");
@@ -173,7 +173,7 @@ class P extends a {
     return t.type === "bar" && this.height === t.height;
   }
 }
-class V extends a {
+class P extends r {
   constructor(t) {
     super();
     e(this, "type", "stackedBar");
@@ -181,7 +181,7 @@ class V extends a {
     e(this, "aes", {
       width: "auto",
       lineWidth: 1,
-      fillColor: c,
+      fillColor: u,
       lineColor: "none",
       opacity: 1
     });
@@ -194,14 +194,37 @@ class V extends a {
     return t.type === "stackedBar" && t.normalize === this.normalize;
   }
 }
-class _ extends a {
+class V extends r {
+  constructor(t) {
+    super();
+    e(this, "type", "stackedArea");
+    e(this, "normalize", !1);
+    e(this, "showBars", !0);
+    e(this, "aes", {
+      barWidth: "auto",
+      lineWidth: 1,
+      fillColor: u,
+      lineColor: "none",
+      barsOpacity: 1,
+      areaOpacity: 0.7
+    });
+    this.normalize = t.normalize ?? !1, this.showBars = t.showBars ?? !0, this.aes = {
+      ...this.aes,
+      ...t.aes
+    };
+  }
+  isEqualForCalculation(t) {
+    return t.type === "stackedArea" && t.normalize === this.normalize && t.showBars === this.showBars;
+  }
+}
+class _ extends r {
   constructor(t) {
     super();
     e(this, "type", "logo");
     e(this, "normalize", !1);
     e(this, "aes", {
       width: "auto",
-      fillColor: c,
+      fillColor: u,
       lineColor: "none",
       opacity: 1
     });
@@ -214,7 +237,7 @@ class _ extends a {
     return t.type === "logo" && t.normalize === this.normalize;
   }
 }
-class I extends a {
+class I extends r {
   constructor(t) {
     super();
     e(this, "type", "binnedDots");
@@ -235,11 +258,11 @@ class I extends a {
     };
   }
   isEqualForCalculation(t) {
-    var r, l;
-    return t.type === "binnedDots" && this.method === t.method && this.position === t.position && ((r = this.keyColumn) == null ? void 0 : r.value) === ((l = t.keyColumn) == null ? void 0 : l.value);
+    var a, l;
+    return t.type === "binnedDots" && this.method === t.method && this.position === t.position && ((a = this.keyColumn) == null ? void 0 : a.value) === ((l = t.keyColumn) == null ? void 0 : l.value);
   }
 }
-class W extends a {
+class M extends r {
   constructor(t) {
     super();
     e(this, "type", "pairedPoints");
@@ -250,8 +273,8 @@ class W extends a {
       lineColor: n,
       lineShape: "solid",
       dotFill: n,
-      dotSize: h,
-      dotShape: u,
+      dotSize: p,
+      dotShape: h,
       opacity: 1
     });
     this.linkColumn = t.linkColumn, this.aes = {
@@ -263,16 +286,16 @@ class W extends a {
     return t.type === "pairedPoints" && this.aes.showOutliers === t.aes.showOutliers && this.linkColumn.value === t.linkColumn.value;
   }
 }
-class M extends a {
+class U extends r {
   constructor(t) {
     super();
     e(this, "type", "sina");
     e(this, "aes", {
       showOutliers: !0,
       width: "auto",
-      dotFill: c,
-      dotSize: h,
-      dotShape: u,
+      dotFill: u,
+      dotSize: p,
+      dotShape: h,
       opacity: 1
     });
     this.aes = {
@@ -284,9 +307,9 @@ class M extends a {
     return t.type === "sina" && this.aes.showOutliers === t.aes.showOutliers;
   }
 }
-class U extends a {
+class H extends r {
   constructor(t) {
-    var r, l, p;
+    var a, l, c;
     super();
     e(this, "type", "stat");
     e(this, "statType");
@@ -298,16 +321,16 @@ class U extends a {
     e(this, "correctionMethod", null);
     e(this, "significanceLevels");
     this.statType = t.statType, this.testMethod = t.testMethod, this.paired = t.paired ?? !1, this.ns = t.ns ?? !0, this.format = t.format ?? "pValue", this.statType === "referenceGroup" && (this.referenceGroup = t.referenceGroup ?? null), (this.statType === "referenceGroup" || this.statType === "pairwise") && (this.correctionMethod = t.correctionMethod ?? null), this.significanceLevels = {
-      one: ((r = t.significanceLevels) == null ? void 0 : r.one) ?? 0.05,
+      one: ((a = t.significanceLevels) == null ? void 0 : a.one) ?? 0.05,
       two: ((l = t.significanceLevels) == null ? void 0 : l.two) ?? 0.01,
-      three: ((p = t.significanceLevels) == null ? void 0 : p.three) ?? 1e-3
+      three: ((c = t.significanceLevels) == null ? void 0 : c.three) ?? 1e-3
     };
   }
   isEqualForCalculation(t) {
-    return t.type === "stat" && Object.keys(this).every((r) => this[r] === t[r]);
+    return t.type === "stat" && Object.keys(this).every((a) => this[a] === t[a]);
   }
 }
-class tt {
+class et {
   constructor(i) {
     e(this, "id");
     e(this, "type", "discrete");
@@ -319,18 +342,18 @@ class tt {
     e(this, "facetBy");
     e(this, "chartSettings");
     e(this, "layers");
-    var t, r, l, p, d, m, f, w, C, y;
-    k.parse(i), this.id = T.uniqueId("settings"), this.y = i.y, this.keyColumn = i.keyColumn ?? null, this.primaryGrouping = i.primaryGrouping ?? null, this.secondaryGrouping = i.secondaryGrouping ?? null, this.facetSettings = {
+    var t, a, l, c, d, m, f, w, C, y;
+    F.parse(i), this.id = O.uniqueId("settings"), this.y = i.y, this.keyColumn = i.keyColumn ?? null, this.primaryGrouping = i.primaryGrouping ?? null, this.secondaryGrouping = i.secondaryGrouping ?? null, this.facetSettings = {
       sharedX: !0,
       sharedY: !0,
       titlePosition: "left",
       ...i.facetSettings
     }, this.facetBy = i.facetBy ?? [], this.chartSettings = {
       size: {
-        width: ((t = i == null ? void 0 : i.size) == null ? void 0 : t.width) ?? (this.facetBy.length ? E : F),
-        height: ((r = i == null ? void 0 : i.size) == null ? void 0 : r.height) ?? (this.facetBy.length ? b : v),
-        outerOffset: ((l = i == null ? void 0 : i.size) == null ? void 0 : l.outerOffset) ?? O,
-        innerOffset: ((p = i == null ? void 0 : i.size) == null ? void 0 : p.innerOffset) ?? D.TOP
+        width: ((t = i == null ? void 0 : i.size) == null ? void 0 : t.width) ?? (this.facetBy.length ? z : E),
+        height: ((a = i == null ? void 0 : i.size) == null ? void 0 : a.height) ?? (this.facetBy.length ? b : k),
+        outerOffset: ((l = i == null ? void 0 : i.size) == null ? void 0 : l.outerOffset) ?? B,
+        innerOffset: ((c = i == null ? void 0 : i.size) == null ? void 0 : c.innerOffset) ?? v.TOP
       },
       title: {
         position: "center",
@@ -377,46 +400,49 @@ class tt {
       }
     }, this.layers = i.layers.map((s) => {
       if (s.type === "box")
-        return new L(s);
+        return new T(s);
       if (s.type === "violin")
-        return new B(s);
+        return new A(s);
       if (s.type === "dot")
         return new G(s);
       if (s.type === "line")
-        return new A(s);
+        return new L(s);
       if (s.type === "errorbar")
         return new q(s);
       if (s.type === "bar")
-        return new P(s);
+        return new W(s);
       if (s.type === "stackedBar")
+        return new P(s);
+      if (s.type === "stackedArea")
         return new V(s);
       if (s.type === "stat")
-        return new U(s);
+        return new H(s);
       if (s.type === "binnedDots")
         return new I(s);
       if (s.type === "pairedPoints")
-        return new W(s);
-      if (s.type === "sina")
         return new M(s);
+      if (s.type === "sina")
+        return new U(s);
       if (s.type === "logo")
         return new _(s);
-      z(s, "Unknown layer type");
+      D(s, "Unknown layer type");
     }).filter(Boolean);
   }
 }
 export {
-  P as BarLayer,
+  W as BarLayer,
   I as BinnedDotsLayer,
-  L as BoxLayer,
-  tt as DiscreteSettingsImpl,
+  T as BoxLayer,
+  et as DiscreteSettingsImpl,
   G as DotLayer,
   q as ErrorBarLayer,
-  A as LineLayer,
+  L as LineLayer,
   _ as LogoPlotLayer,
-  W as PairedPointsLayer,
-  M as SinaLayer,
-  V as StackedBarLayer,
-  U as StatLayer,
-  B as ViolinLayer
+  M as PairedPointsLayer,
+  U as SinaLayer,
+  V as StackedAreaLayer,
+  P as StackedBarLayer,
+  H as StatLayer,
+  A as ViolinLayer
 };
 //# sourceMappingURL=DiscreteSettingsImpl.js.map

package/dist/discrete/DiscreteSettingsImpl.js.map

@@ -1 +1 @@
-{"version":3,"file":"DiscreteSettingsImpl.js","sources":["../../src/discrete/DiscreteSettingsImpl.ts"],"sourcesContent":["import { BLACK, DEFAULT_HEIGHT, DEFAULT_HEIGHT_SMALL, DEFAULT_WIDTH, DEFAULT_WIDTH_SMALL } from '../constants';\nimport type {\n    AesRecord,\n    Color,\n    ColumnName,\n    DataValue,\n    DiscreteSettings,\n    FrameType,\n    InheritAesDiscrete,\n    LegendPosition,\n    LineShape,\n    Orientation,\n    BarLayer as OuterBarLayer,\n    BinnedDotsLayer as OuterBinnedDotsLayer,\n    BoxLayer as OuterBoxLayer,\n    DotLayer as OuterDotLayer,\n    ErrorBarLayer as OuterErrorBarLayer,\n    LineLayer as OuterLineLayer,\n    LogoPlotLayer as OuterLogoPlotLayer,\n    PairedPointsLayer as OuterPairedPointsLayer,\n    SinaLayer as OuterSinaLayer,\n    StackedBarLayer as OuterStackedBarLayer,\n    StatLayer as OuterStatLayer,\n    ViolinLayer as OuterViolinLayer,\n    PointShape,\n    PValueCorrectionMethod,\n    SettingsInterface,\n    SignificanceLevels,\n    StatTestMethod,\n    SummaryErrorValue,\n    SummaryGroupValue,\n    TitlePosition,\n} from '../types';\nimport { DiscreteSettingsSchema } from '../types';\nimport { MIN_MARGIN, PADDINGS } from './constants';\n\nimport lodash from 'lodash';\nimport { exhaustive } from '../utils';\n\nconst DEFAULT_FILL = '#3e9838';\nconst DEFAULT_DOT_SHAPE = '21';\nconst DEFAULT_DOT_SIZE = 3;\n\nabstract class BaseDiscreteLayer {\n    abstract type: string;\n    abstract isEqualForCalculation(otherLayer: DiscreteLayer): boolean;\n}\n\nexport class BoxLayer extends BaseDiscreteLayer {\n    readonly type = 'box';\n    readonly stat: {\n        upper: number;\n        medium: number;\n        lower: number;\n        k: number;\n    } = {\n        upper: 0.75,\n        medium: 0.5,\n        lower: 0.25,\n        k: 1.5,\n    };\n    readonly aes: {\n        showOutliers: boolean;\n        boxWidth: 'auto' | number;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: InheritAesDiscrete | number;\n        dotFill: InheritAesDiscrete | string;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineWidth: number;\n        lineShape: LineShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        boxWidth: 'auto',\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotFill: BLACK,\n        dotSize: DEFAULT_DOT_SIZE,\n        lineColor: BLACK,\n        fillColor: DEFAULT_FILL,\n        lineWidth: 1,\n        lineShape: 'solid',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBoxLayer) {\n        super();\n        this.stat = {\n            ...this.stat,\n            ...layer.stat,\n        };\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'box' &&\n            (Object.keys(this.stat) as (keyof BoxLayer['stat'])[]).every(key => this.stat[key] === otherLayer.stat[key])\n        );\n    }\n}\n\nexport class ViolinLayer extends BaseDiscreteLayer {\n    readonly type = 'violin';\n    readonly stat: {\n        bandwidth: 'auto' | number;\n        stepsCount: 'auto' | number;\n        trim: boolean;\n    } = {\n        bandwidth: 'auto',\n        stepsCount: 40,\n        trim: true,\n    };\n    readonly aes: {\n        width: 'auto' | number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineWidth: number;\n        lineShape: LineShape;\n        opacity: number;\n        showQuartiles: boolean;\n        medianLineStyle: LineShape;\n        quartilesLineStyle: LineShape;\n    } = {\n        width: 'auto',\n        lineColor: BLACK,\n        fillColor: DEFAULT_FILL,\n        lineWidth: 1,\n        lineShape: 'solid',\n        opacity: 1,\n        showQuartiles: true,\n        medianLineStyle: 'solid',\n        quartilesLineStyle: 'dashed'\n    };\n\n    constructor(layer: OuterViolinLayer) {\n        super();\n        this.stat = {\n            ...this.stat,\n            ...layer.stat,\n        };\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'violin' && (\n                this.stat.bandwidth !== otherLayer.stat.bandwidth ||\n                this.stat.trim !== otherLayer.stat.trim ||\n                this.stat.stepsCount !== otherLayer.stat.stepsCount\n            )\n        );\n    }\n}\n\nexport class DotLayer extends BaseDiscreteLayer {\n    readonly type = 'dot';\n    readonly aes: {\n        showOutliers: boolean;\n        jitter: number;\n        dotFill: InheritAesDiscrete | string;\n        lineColor: InheritAesDiscrete | string;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        jitter: 0.8,\n        lineColor: 'none',\n        dotFill: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterDotLayer) {\n        super();\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'dot' && this.aes.showOutliers === otherLayer.aes.showOutliers;\n    }\n}\n\nexport class LineLayer extends BaseDiscreteLayer {\n    readonly type = 'line';\n    readonly pointsValues: SummaryGroupValue;\n    readonly aes: {\n        showOutliers: boolean;\n        lineWidth: number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineShape: InheritAesDiscrete | LineShape;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        lineWidth: 1,\n        lineShape: 'solid',\n        fillColor: 'none',\n        lineColor: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterLineLayer) {\n        super();\n        this.pointsValues = layer.pointsValues;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'line' && this.pointsValues === otherLayer.pointsValues;\n    }\n}\n\nexport class ErrorBarLayer extends BaseDiscreteLayer {\n    readonly type = 'errorbar';\n    readonly pointsValues: SummaryGroupValue;\n    readonly interval: SummaryErrorValue;\n    readonly aes: {\n        showDots: boolean;\n        width: number | 'auto';\n        lineWidth: number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showDots: true,\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterErrorBarLayer) {\n        super();\n        this.pointsValues = layer.pointsValues;\n        this.interval = layer.interval;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'errorbar' &&\n            this.pointsValues === otherLayer.pointsValues &&\n            this.interval === otherLayer.interval\n        );\n    }\n}\n\nexport class BarLayer extends BaseDiscreteLayer {\n    readonly type = 'bar';\n    readonly height: 'min' | 'max' | 'median' | 'mean';\n    readonly aes: {\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBarLayer) {\n        super();\n        this.height = layer.height ?? 'max';\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'bar' && this.height === otherLayer.height;\n    }\n}\n\nexport class StackedBarLayer extends BaseDiscreteLayer {\n    readonly type = 'stackedBar';\n    readonly normalize: boolean = false;\n    readonly aes: {\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterStackedBarLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stackedBar' && otherLayer.normalize === this.normalize;\n    }\n}\n\nexport class LogoPlotLayer extends BaseDiscreteLayer {\n    readonly type = 'logo';\n    readonly normalize: boolean = false;\n    readonly aes: {\n        width: number | 'auto';\n        fillColor: Record<string, string> | Color;\n        lineColor: Color;\n        opacity: number;\n    } = {\n        width: 'auto',\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterLogoPlotLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'logo' && otherLayer.normalize === this.normalize;\n    }\n}\n\nexport class BinnedDotsLayer extends BaseDiscreteLayer {\n    readonly type = 'binnedDots';\n    readonly method: 'dotdensity' | 'histodot';\n    readonly position: 'stack' | 'jitter';\n    readonly keyColumn: ColumnName | null;\n    readonly aes: {\n        showOutliers: boolean;\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        dotSize?: number;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBinnedDotsLayer) {\n        super();\n        this.method = layer.method ?? 'dotdensity';\n        this.position = layer.position ?? 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'pValue';\n        if (this.statType === 'referenceGroup') {\n            this.referenceGroup = layer.referenceGroup ?? null;\n        }\n        if (this.statType === 'referenceGroup' || this.statType === 'pairwise') {\n            this.correctionMethod = layer.correctionMethod ?? null;\n        }\n        this.significanceLevels = {\n            one: layer.significanceLevels?.one ?? 0.05,\n            two: layer.significanceLevels?.two ?? 0.01,\n            three: layer.significanceLevels?.three ?? 0.001,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stat' && (Object.keys(this) as (keyof StatLayer)[]).every(key => this[key] === otherLayer[key]);\n    }\n}\n\nexport type DiscreteLayer =\n    | BoxLayer\n    | ViolinLayer\n    | DotLayer\n    | LineLayer\n    | ErrorBarLayer\n    | BarLayer\n    | StackedBarLayer\n    | BinnedDotsLayer\n    | PairedPointsLayer\n    | SinaLayer\n    | StatLayer\n    | LogoPlotLayer;\n\nexport class DiscreteSettingsImpl implements SettingsInterface {\n    readonly id: string;\n    readonly type = 'discrete';\n    readonly y: ColumnName;\n    readonly keyColumn: ColumnName | null;\n    readonly primaryGrouping: {\n        columnName: ColumnName;\n        order?: DataValue[];\n        inheritedAes?: AesRecord;\n        allowNullGroup?: boolean;\n    } | null;\n    readonly secondaryGrouping: {\n        columnName: ColumnName;\n        order?: DataValue[];\n        inheritedAes?: AesRecord;\n        allowNullGroup?: boolean;\n    } | null;\n    readonly facetSettings: {\n        sharedX: boolean;\n        sharedY: boolean;\n        order?: Record<string, DataValue[]>; // map with ordered values of columns in \"facetBy\"\n        nRows?: number;\n        nCols?: number;\n        titlePosition?: 'left' | 'right' | 'center';\n    } | null;\n    readonly facetBy: ColumnName[];\n    readonly chartSettings: {\n        readonly size: {width: number; height: number, outerOffset: number, innerOffset: number};\n        readonly title: {name: string; show: boolean; position: TitlePosition};\n        readonly orientation: Orientation;\n        readonly yAxis: {\n            title: string | ColumnName;\n            scale: 'linear' | 'log';\n            showGrid: boolean;\n            showTicks: boolean;\n            hiddenLabels: boolean;\n        };\n        readonly xAxis: {\n            title: string | ColumnName;\n            showGrid: boolean;\n            linesBetweenCategories: boolean;\n            showTicks: boolean;\n            labelsPosition: 'center' | '45deg' | '90deg';\n            hiddenLabels: boolean;\n        };\n        readonly frame: {type: FrameType};\n        readonly legend: {show: boolean; position: LegendPosition};\n        readonly tooltips: {\n            box: {show: boolean};\n            violin: {show: boolean};\n            boxOutliers: {show: boolean};\n            line: {show: boolean};\n            dot: {show: boolean};\n            errorBar: {show: boolean};\n            binnedDots: {show: boolean};\n            pairedPoints: {show: boolean};\n            stackedBar: {show: boolean};\n            logo: {show: boolean};\n        };\n    };\n\n    readonly layers: DiscreteLayer[];\n\n    constructor(settings: DiscreteSettings) {\n        DiscreteSettingsSchema.parse(settings);\n        this.id = lodash.uniqueId('settings');\n        this.y = settings.y; // throw error if empty or if y.name doesn't exist in input table\n        this.keyColumn = settings.keyColumn ?? null;\n        this.primaryGrouping = settings.primaryGrouping ?? null; // check columnName\n        this.secondaryGrouping = settings.secondaryGrouping ?? null; // check columnName\n        this.facetSettings = {\n            sharedX: true,\n            sharedY: true,\n            titlePosition: 'left',\n            ...settings.facetSettings,\n        };\n        this.facetBy = settings.facetBy ?? 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'',\n                scale: 'linear',\n                showGrid: true,\n                showTicks: true,\n                hiddenLabels: false,\n                ...settings.yAxis,\n            },\n            xAxis: {\n                title: settings.primaryGrouping?.columnName?.label ?? settings.primaryGrouping?.columnName.value ?? '',\n                showGrid: true,\n                showTicks: true,\n                linesBetweenCategories: true,\n                labelsPosition: 'center',\n                hiddenLabels: false,\n                ...settings.xAxis,\n            },\n            frame: {type: settings.frame?.type ?? 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InheritAesDiscrete | string;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showDots: true,\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterErrorBarLayer) {\n        super();\n        this.pointsValues = layer.pointsValues;\n        this.interval = layer.interval;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'errorbar' &&\n            this.pointsValues === otherLayer.pointsValues &&\n            this.interval === otherLayer.interval\n        );\n    }\n}\n\nexport class BarLayer extends BaseDiscreteLayer {\n    readonly type = 'bar';\n    readonly height: 'min' | 'max' | 'median' | 'mean';\n    readonly aes: {\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBarLayer) {\n        super();\n        this.height = layer.height ?? 'max';\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'bar' && this.height === otherLayer.height;\n    }\n}\n\nexport class StackedBarLayer extends BaseDiscreteLayer {\n    readonly type = 'stackedBar';\n    readonly normalize: boolean = false;\n    readonly aes: {\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterStackedBarLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stackedBar' && otherLayer.normalize === this.normalize;\n    }\n}\n\nexport class StackedAreaLayer extends BaseDiscreteLayer {\n    readonly type = 'stackedArea';\n    readonly normalize: boolean = false;\n    readonly showBars: boolean = true;\n    readonly aes: {\n        barWidth: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        barsOpacity: number;\n        areaOpacity: number;\n    } = {\n        barWidth: 'auto',\n        lineWidth: 1,\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        barsOpacity: 1,\n        areaOpacity: 0.7,\n    };\n\n    constructor(layer: OuterStackedAreaLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.showBars = layer.showBars ?? true;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stackedArea' && otherLayer.normalize === this.normalize && otherLayer.showBars === this.showBars;\n    }\n}\n\nexport class LogoPlotLayer extends BaseDiscreteLayer {\n    readonly type = 'logo';\n    readonly normalize: boolean = false;\n    readonly aes: {\n        width: number | 'auto';\n        fillColor: Record<string, string> | Color;\n        lineColor: Color;\n        opacity: number;\n    } = {\n        width: 'auto',\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterLogoPlotLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'logo' && otherLayer.normalize === this.normalize;\n    }\n}\n\nexport class BinnedDotsLayer extends BaseDiscreteLayer {\n    readonly type = 'binnedDots';\n    readonly method: 'dotdensity' | 'histodot';\n    readonly position: 'stack' | 'jitter';\n    readonly keyColumn: ColumnName | null;\n    readonly aes: {\n        showOutliers: boolean;\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        dotSize?: number;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBinnedDotsLayer) {\n        super();\n        this.method = layer.method ?? 'dotdensity';\n        this.position = layer.position ?? 'stack';\n        this.keyColumn = layer.keyColumn ?? null;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'binnedDots' &&\n            this.method === otherLayer.method &&\n            this.position === otherLayer.position &&\n            this.keyColumn?.value === otherLayer.keyColumn?.value\n        );\n    }\n}\n\nexport class PairedPointsLayer extends BaseDiscreteLayer {\n    readonly type = 'pairedPoints';\n    readonly linkColumn: ColumnName;\n    readonly aes: {\n        showOutliers: boolean;\n        lineColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        lineShape: LineShape;\n        dotFill: InheritAesDiscrete | Color;\n        dotSize: number;\n        dotShape: PointShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        lineWidth: 1,\n        lineColor: BLACK,\n        lineShape: 'solid',\n        dotFill: BLACK,\n        dotSize: DEFAULT_DOT_SIZE,\n        dotShape: DEFAULT_DOT_SHAPE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterPairedPointsLayer) {\n        super();\n        this.linkColumn = layer.linkColumn;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'pairedPoints' &&\n            this.aes.showOutliers === otherLayer.aes.showOutliers &&\n            this.linkColumn.value === otherLayer.linkColumn.value\n        );\n    }\n}\n\nexport class SinaLayer extends BaseDiscreteLayer {\n    readonly type = 'sina';\n    readonly aes: {\n        showOutliers: boolean;\n        width: number | 'auto';\n        dotFill: InheritAesDiscrete | Color;\n        dotSize: number;\n        dotShape: InheritAesDiscrete | PointShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        width: 'auto',\n        dotFill: DEFAULT_FILL,\n        dotSize: DEFAULT_DOT_SIZE,\n        dotShape: DEFAULT_DOT_SHAPE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterSinaLayer) {\n        super();\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'sina' && this.aes.showOutliers === otherLayer.aes.showOutliers;\n    }\n}\n\nexport class StatLayer extends BaseDiscreteLayer {\n    readonly type = 'stat';\n    readonly statType: 'overall' | 'referenceGroup' | 'pairwise';\n    readonly testMethod: StatTestMethod;\n    readonly paired: boolean;\n    readonly ns: boolean;\n    readonly format: 'significance' | 'pValue';\n    readonly referenceGroup: DataValue | null = null;\n    readonly correctionMethod: PValueCorrectionMethod | null = null;\n    readonly significanceLevels: SignificanceLevels;\n\n    constructor(layer: OuterStatLayer) {\n        super();\n        this.statType = layer.statType;\n        this.testMethod = layer.testMethod;\n        this.paired = layer.paired ?? false;\n        this.ns = layer.ns ?? true;\n        this.format = layer.format ?? 'pValue';\n        if (this.statType === 'referenceGroup') {\n            this.referenceGroup = layer.referenceGroup ?? null;\n        }\n        if (this.statType === 'referenceGroup' || this.statType === 'pairwise') {\n            this.correctionMethod = layer.correctionMethod ?? null;\n        }\n        this.significanceLevels = {\n            one: layer.significanceLevels?.one ?? 0.05,\n            two: layer.significanceLevels?.two ?? 0.01,\n            three: layer.significanceLevels?.three ?? 0.001,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stat' && (Object.keys(this) as (keyof StatLayer)[]).every(key => this[key] === otherLayer[key]);\n    }\n}\n\nexport type DiscreteLayer =\n    | StackedAreaLayer\n    | BoxLayer\n    | ViolinLayer\n    | DotLayer\n    | LineLayer\n    | ErrorBarLayer\n    | BarLayer\n    | StackedBarLayer\n    | BinnedDotsLayer\n    | PairedPointsLayer\n    | SinaLayer\n    | StatLayer\n    | LogoPlotLayer;\n\nexport class DiscreteSettingsImpl implements SettingsInterface {\n    readonly id: string;\n    readonly type = 'discrete';\n    readonly y: ColumnName;\n    readonly keyColumn: ColumnName | null;\n    readonly primaryGrouping: {\n        columnName: ColumnName;\n        order?: DataValue[];\n        inheritedAes?: AesRecord;\n        allowNullGroup?: boolean;\n    } | null;\n    readonly secondaryGrouping: {\n        columnName: ColumnName;\n        order?: DataValue[];\n        inheritedAes?: AesRecord;\n        allowNullGroup?: boolean;\n    } | null;\n    readonly facetSettings: {\n        sharedX: boolean;\n        sharedY: boolean;\n        order?: Record<string, DataValue[]>; // map with ordered values of columns in \"facetBy\"\n        nRows?: number;\n        nCols?: number;\n        titlePosition?: 'left' | 'right' | 'center';\n    } | null;\n    readonly facetBy: ColumnName[];\n    readonly chartSettings: {\n        readonly size: {width: number; height: number, outerOffset: number, innerOffset: number};\n        readonly title: {name: string; show: boolean; position: TitlePosition};\n        readonly orientation: Orientation;\n        readonly yAxis: {\n            title: string | ColumnName;\n            scale: 'linear' | 'log';\n            showGrid: boolean;\n            showTicks: boolean;\n            hiddenLabels: boolean;\n        };\n        readonly xAxis: {\n            title: string | ColumnName;\n            showGrid: boolean;\n            linesBetweenCategories: boolean;\n            showTicks: boolean;\n            labelsPosition: 'center' | '45deg' | '90deg';\n            hiddenLabels: boolean;\n        };\n        readonly frame: {type: FrameType};\n        readonly legend: {show: boolean; position: LegendPosition};\n        readonly tooltips: {\n            box: {show: boolean};\n            violin: {show: boolean};\n            boxOutliers: {show: boolean};\n            line: {show: boolean};\n            dot: {show: boolean};\n            errorBar: {show: boolean};\n            binnedDots: {show: boolean};\n            pairedPoints: {show: boolean};\n            stackedBar: {show: boolean};\n            logo: {show: boolean};\n        };\n    };\n\n    readonly layers: DiscreteLayer[];\n\n    constructor(settings: DiscreteSettings) {\n        DiscreteSettingsSchema.parse(settings);\n        this.id = lodash.uniqueId('settings');\n        this.y = settings.y; // throw error if empty or if y.name doesn't exist in input table\n        this.keyColumn = settings.keyColumn ?? null;\n        this.primaryGrouping = settings.primaryGrouping ?? null; // check columnName\n        this.secondaryGrouping = settings.secondaryGrouping ?? null; // check columnName\n        this.facetSettings = {\n            sharedX: true,\n            sharedY: true,\n            titlePosition: 'left',\n            ...settings.facetSettings,\n        };\n        this.facetBy = settings.facetBy ?? [];\n        this.chartSettings = {\n            size: {\n                width: settings?.size?.width ?? (this.facetBy.length ? DEFAULT_WIDTH_SMALL : DEFAULT_WIDTH),\n                height: settings?.size?.height ?? (this.facetBy.length ? DEFAULT_HEIGHT_SMALL : DEFAULT_HEIGHT),\n                outerOffset: settings?.size?.outerOffset ?? MIN_MARGIN,\n                innerOffset: settings?.size?.innerOffset ?? PADDINGS.TOP\n            },\n            title: {\n                position: 'center',\n                show: true,\n                ...settings.title,\n                name: settings.title?.name ?? 'Chart',\n            },\n            orientation: settings.orientation ?? 'vertical',\n            yAxis: {\n                title: settings.y?.label ?? settings.y.value ?? 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package/dist/discrete/components/Chart.d.ts.map

@@ -1 +1 @@
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