@milaboratories/miplots4 1.0.128 → 1.0.130

package/dist/heatmap/getCells.js

@@ -1,37 +1,37 @@
-import p from "../node_modules/lodash/lodash.js";
-import P from "../node_modules/d3-array/src/deviation.js";
-import z from "../node_modules/d3-array/src/mean.js";
-import Q from "../node_modules/d3-array/src/extent.js";
-const W = 5e5;
-function Z(l) {
-  const r = P(l), i = z(l);
-  return r === void 0 || i === void 0 || r === 0 ? (f) => f : (f) => (f - i) / r;
+import x from "../node_modules/lodash/lodash.js";
+import J from "../node_modules/d3-array/src/deviation.js";
+import q from "../node_modules/d3-array/src/mean.js";
+import P from "../node_modules/d3-array/src/extent.js";
+const Q = 5e5;
+function W(a) {
+  const r = J(a), i = q(a);
+  return r === void 0 || i === void 0 || r === 0 ? (y) => y : (y) => (y - i) / r;
 }
-function k(l) {
-  const r = z(l), [i, f] = Q(l);
-  return r === void 0 || i === void 0 || f === void 0 || f === i ? (m) => m : (m) => (m - r) / (f - i);
+function Z(a) {
+  const r = q(a), [i, y] = P(a);
+  return r === void 0 || i === void 0 || y === void 0 || y === i ? (m) => m : (m) => (m - r) / (y - i);
 }
-function w(l, r) {
-  return l === "standardScaling" ? Z(r) : l === "meanNormalization" ? k(r) : (i) => i;
+function k(a, r) {
+  return a === "standardScaling" ? W(r) : a === "meanNormalization" ? Z(r) : (i) => i;
 }
-function D(l) {
-  if (!l.length)
+function G(a) {
+  if (!a.length)
     return [];
   let r = [[]];
-  return l.forEach((i) => {
-    const f = [];
+  return a.forEach((i) => {
+    const y = [];
     i.forEach((m) => {
-      f.push(...r.map((v) => [...v, m]));
-    }), r = f;
+      y.push(...r.map((g) => [...g, m]));
+    }), r = y;
   }), r;
 }
-function ne(l, r, i, f, m, v, h, M, I, N, E, A) {
-  const V = l.columnNames.length ? l.getColumn(l.columnNames[0]).length : 0;
-  V > W && console.error(`Too many cells for graph rendering (${V})`);
-  const X = m.length ? m.map((e) => l.getColumnCategories(e.value)) : [["null"]], O = v.length ? v.map((e) => l.getColumnCategories(e.value)) : [["null"]], R = h.length ? h.map((e) => l.getColumnCategories(e.value)) : [["null"]], $ = D(X), j = D(O), S = D(R), _ = $.map((e) => e.join("_")), g = j.map((e) => e.join("_")), b = S.map((e) => e.join("_")), t = {
+function ne(a, r, i, y, m, g, K, B, z, I, C, N) {
+  const D = a.columnNames.length ? a.getColumn(a.columnNames[0]).length : 0;
+  D > Q && console.error(`Too many cells for graph rendering (${D})`);
+  const A = m.length ? m.map((e) => a.getColumnCategories(e.value)) : [["null"]], X = g.length ? g.map((e) => a.getColumnCategories(e.value)) : [["null"]], O = K.length ? K.map((e) => a.getColumnCategories(e.value)) : [["null"]], S = G(A), M = G(X), $ = G(O), j = S.map((e) => e.join("_")), E = M.map((e) => e.join("_")), b = $.map((e) => e.join("_")), t = {
     meta: {
-      facetKeys: _,
-      xGroupKeys: g,
+      facetKeys: j,
+      xGroupKeys: E,
       yGroupKeys: b,
       xKeysByGroups: {},
       yKeysByGroups: {},
@@ -41,89 +41,93 @@ function ne(l, r, i, f, m, v, h, M, I, N, E, A) {
       yGroupLabels: {},
       xDataByKeys: {},
       yDataByKeys: {},
-      facetKeyValues: _.reduce((e, s, n) => (e[s] = $[n], e), {}),
-      xGroupKeyValues: g.reduce((e, s, n) => (e[s] = j[n], e), {}),
-      yGroupKeyValues: b.reduce((e, s, n) => (e[s] = S[n], e), {}),
+      facetKeyValues: j.reduce((e, s, o) => (e[s] = S[o], e), {}),
+      xGroupKeyValues: E.reduce((e, s, o) => (e[s] = M[o], e), {}),
+      yGroupKeyValues: b.reduce((e, s, o) => (e[s] = $[o], e), {}),
       valueExtent: [1 / 0, -1 / 0]
     },
     facets: {}
-  }, C = r.valueLabels ?? r.value, B = i.valueLabels ?? i.value, Y = M.filter((e) => e.axis === "x").map((e) => e.valueColumn.value), T = M.filter((e) => e.axis === "y").map((e) => e.valueColumn.value), F = Object.values(I ?? {}).map((e) => e.value), U = Object.values(N ?? {}).map((e) => e.value), H = p.uniq([...Y, ...F, C]), J = p.uniq([...T, ...U, B]);
-  if (l.rows.forEach((e) => {
-    const s = m.length ? m.map((a) => e[a.value]).join("_") : "null", n = v.length ? v.map((a) => e[a.value]).join("_") : "null", K = h.length ? h.map((a) => e[a.value]).join("_") : "null", L = v.length ? v.map((a) => e[a.valueLabels ?? a.value]).join(", ") : "", G = h.length ? h.map((a) => e[a.valueLabels ?? a.value]).join(", ") : "";
-    t.meta.xGroupLabels[n] = L, t.meta.yGroupLabels[n] = G;
-    const o = e[r.value], u = e[i.value], y = e[f.value] ?? A;
-    if (!(o === null || u === null || y === null)) {
-      if (t.facets[s] || (t.facets[s] = {
-        xKeys: [],
-        yKeys: [],
-        xKeysByGroups: {},
-        yKeysByGroups: {},
-        cells: {}
-      }), t.facets[s].xKeysByGroups[n] || (t.facets[s].xKeysByGroups[n] = []), t.facets[s].yKeysByGroups[K] || (t.facets[s].yKeysByGroups[K] = []), t.facets[s].xKeys.push(o), t.facets[s].yKeys.push(u), t.facets[s].xKeysByGroups[n].push(o), t.facets[s].yKeysByGroups[K].push(u), t.facets[s].cells[o] || (t.facets[s].cells[o] = {}), t.meta.valueExtent[0] = Math.min(y, t.meta.valueExtent[0]), t.meta.valueExtent[1] = Math.max(y, t.meta.valueExtent[1]), t.facets[s].cells[o][u])
-        throw Error(`More than 1 value for x=${o}, y=${u}`);
-      if (t.meta.xLabels[o] && String(e[C]) !== t.meta.xLabels[o])
-        throw Error(`More than 1 x-label value for x=${o}`);
-      if (t.meta.yLabels[u] && String(e[B]) !== t.meta.yLabels[u])
-        throw Error(`More than 1 y-label value for y=${u}`);
-      t.meta.xLabels[o] = String(e[C]), t.meta.yLabels[u] = String(e[B]), H.forEach((a) => {
-        const c = typeof t.meta.xDataByKeys[a] < "u", d = c && typeof t.meta.xDataByKeys[a][o] < "u";
-        if (c || (t.meta.xDataByKeys[a] = {}), d && t.meta.xDataByKeys[a][o] !== e[a])
-          throw Error(`More than 1 value for x = ${o} and column = ${a}`);
-        d || (t.meta.xDataByKeys[a][o] = e[a]);
-      }), J.forEach((a) => {
-        const c = typeof t.meta.yDataByKeys[a] < "u", d = c && typeof t.meta.yDataByKeys[a][u] < "u";
-        if (c || (t.meta.yDataByKeys[a] = {}), d && t.meta.yDataByKeys[a][u] !== e[a])
-          throw Error(`More than 1 value for y = ${u} and column = ${a}`);
-        d || (t.meta.yDataByKeys[a][u] = e[a]);
-      }), t.facets[s].cells[o][u] = {
-        id: `${o}_${u}`,
-        x: o,
-        y: u,
-        value: y,
-        normalizedValue: y,
-        data: e
-      };
-    }
-  }), t.meta.facetKeys = t.meta.facetKeys.filter((e) => t.facets[e]), t.meta.facetKeys.forEach((e) => {
+  }, _ = r.valueLabels ?? r.value, w = i.valueLabels ?? i.value, R = B.filter((e) => e.axis === "x").map((e) => e.valueColumn.value), Y = B.filter((e) => e.axis === "y").map((e) => e.valueColumn.value), T = Object.values(z ?? {}).map((e) => e.value), F = Object.values(I ?? {}).map((e) => e.value), U = x.uniq([...R, ...T, _]), H = x.uniq([...Y, ...F, w]);
+  for (let e = 0; e < a.rowsCount; e++) {
+    const s = m.length ? m.map((n) => a.getColumnValue(n.value, e)).join("_") : "null", o = g.length ? g.map((n) => a.getColumnValue(n.value, e)).join("_") : "null", d = K.length ? K.map((n) => a.getColumnValue(n.value, e)).join("_") : "null", V = g.length ? g.map((n) => a.getColumnValue(n.valueLabels ?? n.value, e)).join(", ") : "", L = K.length ? K.map((n) => a.getColumnValue(n.valueLabels ?? n.value, e)).join(", ") : "";
+    t.meta.xGroupLabels[o] = V, t.meta.yGroupLabels[o] = L;
+    const l = String(a.getColumnValue(r.value, e)), u = String(a.getColumnValue(i.value, e)), f = a.getColumnValue(y.value, e) ?? N;
+    if (l === "null" || u === "null" || f === null)
+      continue;
+    if (t.facets[s] || (t.facets[s] = {
+      xKeys: [],
+      yKeys: [],
+      xKeysByGroups: {},
+      yKeysByGroups: {},
+      cells: {}
+    }), t.facets[s].xKeysByGroups[o] || (t.facets[s].xKeysByGroups[o] = []), t.facets[s].yKeysByGroups[d] || (t.facets[s].yKeysByGroups[d] = []), t.facets[s].xKeys.push(l), t.facets[s].yKeys.push(u), t.facets[s].xKeysByGroups[o].push(l), t.facets[s].yKeysByGroups[d].push(u), t.facets[s].cells[l] || (t.facets[s].cells[l] = {}), t.meta.valueExtent[0] = Math.min(f, t.meta.valueExtent[0]), t.meta.valueExtent[1] = Math.max(f, t.meta.valueExtent[1]), t.facets[s].cells[l][u])
+      throw Error(`More than 1 value for x=${l}, y=${u}`);
+    const v = a.getColumnValue(_, e);
+    if (t.meta.xLabels[l] && String(v) !== t.meta.xLabels[l])
+      throw Error(`More than 1 x-label value for x=${l}`);
+    const p = a.getColumnValue(w, e);
+    if (t.meta.yLabels[u] && String(p) !== t.meta.yLabels[u])
+      throw Error(`More than 1 y-label value for y=${u}`);
+    t.meta.xLabels[l] = String(v), t.meta.yLabels[u] = String(p), U.forEach((n) => {
+      const c = typeof t.meta.xDataByKeys[n] < "u", h = c && typeof t.meta.xDataByKeys[n][l] < "u";
+      if (c || (t.meta.xDataByKeys[n] = {}), h && t.meta.xDataByKeys[n][l] !== a.getColumnValue(n, e))
+        throw Error(`More than 1 value for x = ${l} and column = ${n}`);
+      h || (t.meta.xDataByKeys[n][l] = a.getColumnValue(n, e));
+    }), H.forEach((n) => {
+      const c = typeof t.meta.yDataByKeys[n] < "u", h = c && typeof t.meta.yDataByKeys[n][u] < "u";
+      if (c || (t.meta.yDataByKeys[n] = {}), h && t.meta.yDataByKeys[n][u] !== a.getColumnValue(n, e))
+        throw Error(`More than 1 value for y = ${u} and column = ${n}`);
+      h || (t.meta.yDataByKeys[n][u] = a.getColumnValue(n, e));
+    }), t.facets[s].cells[l][u] = {
+      isCell: !0,
+      idx: e,
+      id: `${l}_${u}`,
+      x: l,
+      y: u,
+      value: f,
+      normalizedValue: f
+    };
+  }
+  if (t.meta.facetKeys = t.meta.facetKeys.filter((e) => t.facets[e]), t.meta.facetKeys.forEach((e) => {
     const s = t.facets[e];
-    s.xKeys = p.uniq(s.xKeys), s.yKeys = p.uniq(s.yKeys), g.forEach((n) => {
-      t.facets[e].xKeysByGroups[n] = p.uniq(
-        t.facets[e].xKeysByGroups[n]
+    s.xKeys = x.uniq(s.xKeys), s.yKeys = x.uniq(s.yKeys), E.forEach((o) => {
+      t.facets[e].xKeysByGroups[o] = x.uniq(
+        t.facets[e].xKeysByGroups[o]
       );
-    }), b.forEach((n) => {
-      t.facets[e].yKeysByGroups[n] = p.uniq(
-        t.facets[e].yKeysByGroups[n]
+    }), b.forEach((o) => {
+      t.facets[e].yKeysByGroups[o] = x.uniq(
+        t.facets[e].yKeysByGroups[o]
       );
     });
-  }), E) {
+  }), C) {
     const e = [1 / 0, -1 / 0];
     t.meta.facetKeys.forEach((s) => {
-      const { xKeys: n, yKeys: K, cells: L } = t.facets[s], G = E.direction === "row" ? n : K, o = E.direction === "row" ? K : n, u = E.direction === "row" ? (y, a) => {
-        var c;
-        return (c = L[y]) == null ? void 0 : c[a];
-      } : (y, a) => {
-        var c;
-        return (c = L[a]) == null ? void 0 : c[y];
+      const { xKeys: o, yKeys: d, cells: V } = t.facets[s], L = C.direction === "row" ? o : d, l = C.direction === "row" ? d : o, u = C.direction === "row" ? (f, v) => {
+        var p;
+        return (p = V[f]) == null ? void 0 : p[v];
+      } : (f, v) => {
+        var p;
+        return (p = V[v]) == null ? void 0 : p[f];
       };
-      o.forEach((y) => {
-        const a = [];
-        G.forEach((d) => {
-          var q;
-          const x = (q = u(d, y)) == null ? void 0 : q.value;
-          x !== void 0 && a.push(x);
+      l.forEach((f) => {
+        const v = [];
+        L.forEach((n) => {
+          var h;
+          const c = (h = u(n, f)) == null ? void 0 : h.value;
+          c !== void 0 && v.push(c);
         });
-        const c = w(E.method, a);
-        G.forEach((d) => {
-          const x = u(d, y);
-          x !== void 0 && (x.normalizedValue = c(x.value), e[0] = Math.min(x.normalizedValue, e[0]), e[1] = Math.max(x.normalizedValue, e[1]));
+        const p = k(C.method, v);
+        L.forEach((n) => {
+          const c = u(n, f);
+          c !== void 0 && (c.normalizedValue = p(c.value), e[0] = Math.min(c.normalizedValue, e[0]), e[1] = Math.max(c.normalizedValue, e[1]));
         });
       });
     }), t.meta.valueExtent = e;
   }
-  return t.meta.xKeysByGroups = g.reduce((e, s) => (e[s] = p.uniq(
-    p.flatten(t.meta.facetKeys.map((n) => t.facets[n].xKeysByGroups[s]))
-  ), e), {}), t.meta.yKeysByGroups = b.reduce((e, s) => (e[s] = p.uniq(
-    p.flatten(t.meta.facetKeys.map((n) => t.facets[n].yKeysByGroups[s]))
+  return t.meta.xKeysByGroups = E.reduce((e, s) => (e[s] = x.uniq(
+    x.flatten(t.meta.facetKeys.map((o) => t.facets[o].xKeysByGroups[s]))
+  ), e), {}), t.meta.yKeysByGroups = b.reduce((e, s) => (e[s] = x.uniq(
+    x.flatten(t.meta.facetKeys.map((o) => t.facets[o].yKeysByGroups[s]))
   ), e), {}), t.meta.valueExtent[0] === 1 / 0 && (t.meta.valueExtent[0] = 0), t.meta.valueExtent[1] === -1 / 0 && (t.meta.valueExtent[1] = 0), t;
 }
 export {

package/dist/heatmap/getCells.js.map

@@ -1 +1 @@
-{"version":3,"file":"getCells.js","sources":["../../src/heatmap/getCells.ts"],"sourcesContent":["import type {DataFrame} from '../DataFrame';\nimport type {HeatmapSettingsImpl} from './HeatmapSettingsImpl';\nimport type {ColumnName, DataValue, NormalizationMethod} from '../types';\nimport {deviation, extent, mean} from 'd3-array';\nimport lodash from 'lodash';\n\nconst MAX_RENDERED_CELLS_COUNT = 500000;\nfunction normalizeByStd(values:number[]) {\n    const stdValue = deviation(values);\n    const meanValue = mean(values);\n\n    if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n        return (v:number) => v;\n    }\n    return (v:number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values:number[]) {\n    const meanValue = mean(values);\n    const [min, max] = extent(values);\n    if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n        return (v:number) => v;\n    }\n    return (v:number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method:NormalizationMethod, values:number[]) {\n    if (method === 'standardScaling') {\n        return normalizeByStd(values);\n    }\n    if (method === 'meanNormalization') {\n        return normalizeByMinMax(values);\n    }\n    return (v:number) => v;\n}\n\nexport type Cell = {\n    id: string;\n    value: DataValue;\n    normalizedValue: DataValue;\n    x: DataValue;\n    y: DataValue;\n    data: Record<string, DataValue>;\n};\n\nexport type GroupedCellsData = {\n    meta: {\n        facetKeys: string[];\n        xGroupKeys: string[];\n        yGroupKeys: string[];\n        xKeysByGroups: Record<string, string[]>;\n        yKeysByGroups: Record<string, string[]>;\n        // for titles, if facet by more 1 columns title has several values separated by commas\n        facetKeyValues: Record<string, string[]>;\n        xGroupKeyValues: Record<string, string[]>;\n        yGroupKeyValues: Record<string, string[]>;\n        xLabels: Record<string, string>;\n        yLabels: Record<string, string>;\n        xGroupLabels: Record<string, string>;\n        yGroupLabels: Record<string, string>;\n        valueExtent: [number, number]; // for color scales\n        // data for labels, annotations and dendrograms\n        xDataByKeys: Record<string, Record<string, DataValue>>;\n        yDataByKeys: Record<string, Record<string, DataValue>>;\n    };\n    //facet groups\n    facets: Record<\n        string,\n        {\n            // axis keys\n            xKeys: string[];\n            yKeys: string[];\n            // axis keys grouped by group keys from meta\n            xKeysByGroups: Record<string, string[]>;\n            yKeysByGroups: Record<string, string[]>;\n            // cells grouped by X, then by Y\n            cells: Record<string, Record<string, Cell>>;\n        }\n    >;\n};\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n    if (!keysLists.length) {\n        return [];\n    }\n    let result: string[][] = [[]];\n    keysLists.forEach(keys => {\n        const nextResult: string[][] = [];\n        keys.forEach(key => {\n            nextResult.push(...result.map(resultItem => [...resultItem, key]));\n        });\n        result = nextResult;\n    });\n    return result;\n}\n\nexport function getCells(\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumn: ColumnName,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalization: HeatmapSettingsImpl['normalization'],\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n): GroupedCellsData {\n    const dataSize = data.columnNames.length ? data.getColumn(data.columnNames[0]).length : 0;\n    if (dataSize > MAX_RENDERED_CELLS_COUNT) {\n        console.error(`Too many cells for graph rendering (${dataSize})`);\n    }\n    const facetKeysLists = facetBy.length\n        ? facetBy.map(column => data.getColumnCategories(column.value))\n        : [['null']];\n    const xGroupKeysLists = xGroupBy.length\n        ? xGroupBy.map(column => data.getColumnCategories(column.value))\n        : [['null']];\n    const yGroupKeysLists = yGroupBy.length\n        ? yGroupBy.map(column => data.getColumnCategories(column.value))\n        : [['null']];\n    const facetKeysCombinations = getKeysCombinations(facetKeysLists);\n    const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n    const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n    const facetKeys = facetKeysCombinations.map(keys => keys.join('_'));\n    const xGroupKeys = xGroupKeysCombinations.map(keys => keys.join('_'));\n    const yGroupKeys = yGroupKeysCombinations.map(keys => keys.join('_'));\n\n    const result: GroupedCellsData = {\n        meta: {\n            facetKeys,\n            xGroupKeys,\n            yGroupKeys,\n            xKeysByGroups: {},\n            yKeysByGroups: {},\n            xLabels: {},\n            yLabels: {},\n            xGroupLabels: {},\n            yGroupLabels: {},\n            xDataByKeys: {},\n            yDataByKeys: {},\n            facetKeyValues: facetKeys.reduce((res: Record<string, string[]>, key, index) => {\n                res[key] = facetKeysCombinations[index];\n                return res;\n            }, {}),\n            xGroupKeyValues: xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n                res[key] = xGroupKeysCombinations[index];\n                return res;\n            }, {}),\n            yGroupKeyValues: yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n                res[key] = yGroupKeysCombinations[index];\n                return res;\n            }, {}),\n            valueExtent: [Infinity, -Infinity],\n        },\n        facets: {},\n    };\n\n    const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n    const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n    const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.value);\n    const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.value);\n    const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n    const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n    const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n    const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n    data.rows.forEach(row => {\n        const facetKey = facetBy.length ? facetBy.map(column => row[column.value]).join('_') : 'null';\n        const xGroupKey = xGroupBy.length ? xGroupBy.map(column => row[column.value]).join('_') : 'null';\n        const yGroupKey = yGroupBy.length ? yGroupBy.map(column => row[column.value]).join('_') : 'null';\n        const xGroupLabel = xGroupBy.length ? xGroupBy.map(column => row[column.valueLabels ?? column.value]).join(', ') : '';\n        const yGroupLabel = yGroupBy.length ? yGroupBy.map(column => row[column.valueLabels ?? column.value]).join(', ') : '';\n        result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n        result.meta.yGroupLabels[xGroupKey] = yGroupLabel;\n        const x = row[xColumn.value] as string;\n        const y = row[yColumn.value] as string;\n        const value = (row[valueColumn.value] ?? NAValueAs) as number | null;\n        if (x === null || y === null || value === null) {\n            return;\n        }\n        if (!result.facets[facetKey]) {\n            result.facets[facetKey] = {\n                xKeys: [],\n                yKeys: [],\n                xKeysByGroups: {},\n                yKeysByGroups: {},\n                cells: {},\n            };\n        }\n        if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n        }\n        if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n        }\n        result.facets[facetKey].xKeys.push(x);\n        result.facets[facetKey].yKeys.push(y);\n        result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n        result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n        if (!result.facets[facetKey].cells[x]) {\n            result.facets[facetKey].cells[x] = {};\n        }\n        result.meta.valueExtent[0] = Math.min(value, result.meta.valueExtent[0]);\n        result.meta.valueExtent[1] = Math.max(value, result.meta.valueExtent[1]);\n        if (result.facets[facetKey].cells[x][y]) {\n            throw Error(`More than 1 value for x=${x}, y=${y}`);\n        }\n        if (result.meta.xLabels[x] && String(row[xLabelsSource]) !== result.meta.xLabels[x]) {\n            throw Error(`More than 1 x-label value for x=${x}`);\n        }\n        if (result.meta.yLabels[y] && String(row[yLabelsSource]) !== result.meta.yLabels[y]) {\n            throw Error(`More than 1 y-label value for y=${y}`);\n        }\n        result.meta.xLabels[x] = String(row[xLabelsSource]);\n        result.meta.yLabels[y] = String(row[yLabelsSource]);\n        // data for labels, annotations and dendrograms by X\n        additionalDataColumnsX.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.xDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== row[columnKey]) {\n                throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.xDataByKeys[columnKey][x] = row[columnKey];\n            }\n        });\n        // data for labels, annotations and dendrograms by Y\n        additionalDataColumnsY.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.yDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== row[columnKey]) {\n                throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.yDataByKeys[columnKey][y] = row[columnKey];\n            }\n        });\n        result.facets[facetKey].cells[x][y] = {\n            id: `${x}_${y}`,\n            x,\n            y,\n            value,\n            normalizedValue: value,\n            data: row,\n        };\n    });\n    result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n    // make uniq x, y, x-group and y-group keys\n    result.meta.facetKeys.forEach(facetKey => {\n        const facet = result.facets[facetKey];\n        facet.xKeys = lodash.uniq(facet.xKeys);\n        facet.yKeys = lodash.uniq(facet.yKeys);\n        xGroupKeys.forEach(xGroupKey => {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.uniq(\n                result.facets[facetKey].xKeysByGroups[xGroupKey]\n            );\n        });\n        yGroupKeys.forEach(yGroupKey => {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.uniq(\n                result.facets[facetKey].yKeysByGroups[yGroupKey]\n            );\n        });\n    });\n\n    if (normalization) {\n        const valueExtent = [Infinity, -Infinity] as [number, number];\n        result.meta.facetKeys.forEach(facetKey => {\n            const {xKeys, yKeys, cells} = result.facets[facetKey];\n            const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n            const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n            const cellGetter = normalization.direction === 'row'\n                ? (cellKey:string, groupKey:string) => cells[cellKey]?.[groupKey]\n                : (cellKey:string, groupKey:string) => cells[groupKey]?.[cellKey];\n            groupKeys.forEach((groupKey) => {\n                const values:number[] = [];\n                cellKeys.forEach((cellKey) => {\n                    const v = cellGetter(cellKey, groupKey)?.value;\n                    if (v !== undefined) {\n                        values.push(v as number);\n                    }\n                });\n                const normalize = getNormalizationFn(normalization.method, values);\n                cellKeys.forEach((cellKey) => {\n                    const cell = cellGetter(cellKey, groupKey);\n                    if (cell !== undefined) {\n                        cell.normalizedValue = normalize(cell.value as number);\n                        valueExtent[0] = Math.min(cell.normalizedValue, valueExtent[0]);\n                        valueExtent[1] = Math.max(cell.normalizedValue, valueExtent[1]);\n                    }\n                });\n            });\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n\n    // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n    result.meta.xKeysByGroups = xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n        res[xGroupKey] = lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n        );\n        return res;\n    }, {});\n    result.meta.yKeysByGroups = yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n        res[yGroupKey] = lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].yKeysByGroups[yGroupKey]))\n        );\n        return res;\n    }, {});\n\n    // avoid render errors on empty data\n    if (result.meta.valueExtent[0] === Infinity) {\n        result.meta.valueExtent[0] = 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+{"version":3,"file":"getCells.js","sources":["../../src/heatmap/getCells.ts"],"sourcesContent":["import { deviation, extent, mean } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\n\nconst MAX_RENDERED_CELLS_COUNT = 500000;\nfunction normalizeByStd(values:number[]) {\n    const stdValue = deviation(values);\n    const meanValue = mean(values);\n\n    if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n        return (v:number) => v;\n    }\n    return (v:number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values:number[]) {\n    const meanValue = mean(values);\n    const [min, max] = extent(values);\n    if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n        return (v:number) => v;\n    }\n    return (v:number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method:NormalizationMethod, values:number[]) {\n    if (method === 'standardScaling') {\n        return normalizeByStd(values);\n    }\n    if (method === 'meanNormalization') {\n        return normalizeByMinMax(values);\n    }\n    return (v:number) => v;\n}\n\nexport type Cell = {\n    isCell: true;\n    idx: number;\n    id: string;\n    value: DataValue;\n    normalizedValue: DataValue;\n    x: DataValue;\n    y: DataValue;\n};\n\nexport type GroupedCellsData = {\n    meta: {\n        facetKeys: string[];\n        xGroupKeys: string[];\n        yGroupKeys: string[];\n        xKeysByGroups: Record<string, string[]>;\n        yKeysByGroups: Record<string, string[]>;\n        // for titles, if facet by more 1 columns title has several values separated by commas\n        facetKeyValues: Record<string, string[]>;\n        xGroupKeyValues: Record<string, string[]>;\n        yGroupKeyValues: Record<string, string[]>;\n        xLabels: Record<string, string>;\n        yLabels: Record<string, string>;\n        xGroupLabels: Record<string, string>;\n        yGroupLabels: Record<string, string>;\n        valueExtent: [number, number]; // for color scales\n        // data for labels, annotations and dendrograms\n        xDataByKeys: Record<string, Record<string, DataValue>>;\n        yDataByKeys: Record<string, Record<string, DataValue>>;\n    };\n    //facet groups\n    facets: Record<\n        string,\n        {\n            // axis keys\n            xKeys: string[];\n            yKeys: string[];\n            // axis keys grouped by group keys from meta\n            xKeysByGroups: Record<string, string[]>;\n            yKeysByGroups: Record<string, string[]>;\n            // cells grouped by X, then by Y\n            cells: Record<string, Record<string, Cell>>;\n        }\n    >;\n};\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n    if (!keysLists.length) {\n        return [];\n    }\n    let result: string[][] = [[]];\n    keysLists.forEach(keys => {\n        const nextResult: string[][] = [];\n        keys.forEach(key => {\n            nextResult.push(...result.map(resultItem => [...resultItem, key]));\n        });\n        result = nextResult;\n    });\n    return result;\n}\n\nexport function getCells(\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumn: ColumnName,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalization: HeatmapSettingsImpl['normalization'],\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n): GroupedCellsData {\n    const dataSize = data.columnNames.length ? 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NAValueAs) as number | null;\n        \n        if (x === 'null' || y === 'null' || value === null) {\n            continue;\n        }\n\n        if (!result.facets[facetKey]) {\n            result.facets[facetKey] = {\n                xKeys: [],\n                yKeys: [],\n                xKeysByGroups: {},\n                yKeysByGroups: {},\n                cells: {},\n            };\n        }\n        if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n        }\n        if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n        }\n        result.facets[facetKey].xKeys.push(x);\n        result.facets[facetKey].yKeys.push(y);\n        result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n        result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n        if (!result.facets[facetKey].cells[x]) {\n            result.facets[facetKey].cells[x] = {};\n        }\n        result.meta.valueExtent[0] = Math.min(value, result.meta.valueExtent[0]);\n        result.meta.valueExtent[1] = Math.max(value, result.meta.valueExtent[1]);\n        if (result.facets[facetKey].cells[x][y]) {\n            throw Error(`More than 1 value for x=${x}, y=${y}`);\n        }\n        const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n        if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n            throw Error(`More than 1 x-label value for x=${x}`);\n        }\n        const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n        if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n            throw Error(`More than 1 y-label value for y=${y}`);\n        }\n        result.meta.xLabels[x] = String(xLabelsSourceValue);\n        result.meta.yLabels[y] = String(yLabelsSourceValue);\n        // data for labels, annotations and dendrograms by X\n        additionalDataColumnsX.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.xDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n            }\n        });\n        // data for labels, annotations and dendrograms by Y\n        additionalDataColumnsY.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.yDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n            }\n        });\n        result.facets[facetKey].cells[x][y] = {\n            isCell: true,\n            idx: i,\n            id: `${x}_${y}`,\n            x,\n            y,\n            value,\n            normalizedValue: value,\n        };\n    }\n\n    result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n    // make uniq x, y, x-group and y-group keys\n    result.meta.facetKeys.forEach(facetKey => {\n        const facet = result.facets[facetKey];\n        facet.xKeys = lodash.uniq(facet.xKeys);\n        facet.yKeys = lodash.uniq(facet.yKeys);\n        xGroupKeys.forEach(xGroupKey => {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.uniq(\n                result.facets[facetKey].xKeysByGroups[xGroupKey]\n            );\n        });\n        yGroupKeys.forEach(yGroupKey => {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.uniq(\n                result.facets[facetKey].yKeysByGroups[yGroupKey]\n            );\n        });\n    });\n\n    if (normalization) {\n        const valueExtent = [Infinity, -Infinity] as [number, number];\n        result.meta.facetKeys.forEach(facetKey => {\n            const {xKeys, yKeys, cells} = result.facets[facetKey];\n            const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n            const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n            const cellGetter = normalization.direction === 'row'\n                ? (cellKey:string, groupKey:string) => cells[cellKey]?.[groupKey]\n                : (cellKey:string, groupKey:string) => cells[groupKey]?.[cellKey];\n            groupKeys.forEach((groupKey) => {\n                const values:number[] = [];\n                cellKeys.forEach((cellKey) => {\n                    const v = cellGetter(cellKey, groupKey)?.value;\n                    if (v !== undefined) {\n                        values.push(v as number);\n                    }\n                });\n                const normalize = getNormalizationFn(normalization.method, values);\n                cellKeys.forEach((cellKey) => {\n                    const cell = cellGetter(cellKey, groupKey);\n                    if (cell !== undefined) {\n                        cell.normalizedValue = normalize(cell.value as number);\n                        valueExtent[0] = Math.min(cell.normalizedValue, valueExtent[0]);\n                        valueExtent[1] = Math.max(cell.normalizedValue, valueExtent[1]);\n                    }\n                });\n            });\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n\n    // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n    result.meta.xKeysByGroups = xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n        res[xGroupKey] = lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n        );\n        return res;\n    }, {});\n    result.meta.yKeysByGroups = yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n        res[yGroupKey] = lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].yKeysByGroups[yGroupKey]))\n        );\n        return res;\n    }, {});\n\n    // avoid render errors on empty data\n    if (result.meta.valueExtent[0] === Infinity) {\n        result.meta.valueExtent[0] = 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package/dist/heatmap/getDendrograms.d.ts

@@ -3,8 +3,8 @@ import { GroupedCellsData } from './getCells';
 import { HeatmapSettingsImpl } from './HeatmapSettingsImpl';
 import { HierarchyNode } from 'd3-hierarchy';
 export type DendrogramsData = Record<string, {
-    hierarchyX: HierarchyNode<Cluster>[];
-    hierarchyY: HierarchyNode<Cluster>[];
+    hierarchyByGroupX: Record<string, HierarchyNode<Cluster>>;
+    hierarchyByGroupY: Record<string, HierarchyNode<Cluster>>;
 }>;
 export declare function getDendrograms(groupedCellsData: GroupedCellsData, dendrogramX: HeatmapSettingsImpl['dendrogramX'], dendrogramY: HeatmapSettingsImpl['dendrogramY'], facetSettings: HeatmapSettingsImpl['facetSettings']): DendrogramsData;
 //# sourceMappingURL=getDendrograms.d.ts.map

package/dist/heatmap/getDendrograms.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"getDendrograms.d.ts","sourceRoot":"","sources":["../../src/heatmap/getDendrograms.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAC,OAAO,EAAC,MAAM,oBAAoB,CAAC;AAChD,OAAO,KAAK,EAAC,gBAAgB,EAAC,MAAM,YAAY,CAAC;AACjD,OAAO,KAAK,EAAC,mBAAmB,EAAC,MAAM,uBAAuB,CAAC;AAE/D,OAAO,KAAK,EAAC,aAAa,EAAC,MAAM,cAAc,CAAC;AAGhD,MAAM,MAAM,eAAe,GAAG,MAAM,CAAC,MAAM,EAAE;IACzC,UAAU,EAAE,aAAa,CAAC,OAAO,CAAC,EAAE,CAAC;IACrC,UAAU,EAAE,aAAa,CAAC,OAAO,CAAC,EAAE,CAAC;CACxC,CAAC,CAAA;AAEF,wBAAgB,cAAc,CAC1B,gBAAgB,EAAE,gBAAgB,EAClC,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,aAAa,EAAE,mBAAmB,CAAC,eAAe,CAAC,GACpD,eAAe,CA4DjB"}
+{"version":3,"file":"getDendrograms.d.ts","sourceRoot":"","sources":["../../src/heatmap/getDendrograms.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAC,OAAO,EAAC,MAAM,oBAAoB,CAAC;AAChD,OAAO,KAAK,EAAC,gBAAgB,EAAC,MAAM,YAAY,CAAC;AACjD,OAAO,KAAK,EAAC,mBAAmB,EAAC,MAAM,uBAAuB,CAAC;AAE/D,OAAO,KAAK,EAAC,aAAa,EAAC,MAAM,cAAc,CAAC;AAGhD,MAAM,MAAM,eAAe,GAAG,MAAM,CAAC,MAAM,EAAE;IACzC,iBAAiB,EAAE,MAAM,CAAC,MAAM,EAAE,aAAa,CAAC,OAAO,CAAC,CAAC,CAAC;IAC1D,iBAAiB,EAAE,MAAM,CAAC,MAAM,EAAE,aAAa,CAAC,OAAO,CAAC,CAAC,CAAC;CAC7D,CAAC,CAAA;AAEF,wBAAgB,cAAc,CAC1B,gBAAgB,EAAE,gBAAgB,EAClC,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,WAAW,EAAE,mBAAmB,CAAC,aAAa,CAAC,EAC/C,aAAa,EAAE,mBAAmB,CAAC,eAAe,CAAC,GACpD,eAAe,CAwDjB"}

package/dist/heatmap/getDendrograms.js

@@ -1,48 +1,48 @@
 import { getClusters as x } from "./getClusters.js";
-import m from "../node_modules/d3-hierarchy/src/hierarchy/index.js";
-function z(e, y, n, k) {
-  const { facetKeys: G, xGroupKeys: B, yGroupKeys: E } = e.meta, K = {};
-  if (y && k.sharedX)
+import B from "../node_modules/d3-hierarchy/src/hierarchy/index.js";
+function w(e, o, a, K) {
+  const { facetKeys: G, xGroupKeys: k, yGroupKeys: m } = e.meta, p = {};
+  if (o && K.sharedX)
     throw Error("Dendrogram on X axis is not available with shared by facets X axis");
-  return G.forEach((c) => {
-    const u = {
-      hierarchyX: [],
-      hierarchyY: []
-    }, o = e.facets[c];
-    if (y) {
-      const r = [], i = [];
-      B.forEach((s) => {
-        const h = o.xKeysByGroups[s], p = o.yKeys, t = x(
-          h,
-          h.map((l) => p.map((f) => {
-            var a;
-            return ((a = o.cells[l][f]) == null ? void 0 : a.normalizedValue) ?? y.fillNA;
+  return G.forEach((y) => {
+    const n = {
+      hierarchyByGroupX: {},
+      hierarchyByGroupY: {}
+    }, c = e.facets[y];
+    if (o) {
+      const r = [];
+      k.forEach((s) => {
+        const i = c.xKeysByGroups[s], u = c.yKeys, t = x(
+          i,
+          i.map((f) => u.map((l) => {
+            var h;
+            return ((h = c.cells[f][l]) == null ? void 0 : h.normalizedValue) ?? o.fillNA;
           })),
-          y.distance,
-          y.linkage
+          o.distance,
+          o.linkage
         );
-        e.facets[c].xKeysByGroups[s] = t.keys, i.push(...t.keys), r.push(t);
-      }), e.facets[c].xKeys = i, u.hierarchyX = r.map((s) => m(s));
+        e.facets[y].xKeysByGroups[s] = t.keys, r.push(...t.keys), n.hierarchyByGroupX[s] = B(t);
+      }), e.facets[y].xKeys = r;
     }
-    if (n) {
-      const r = [], i = [];
-      E.forEach((s) => {
-        const h = o.yKeysByGroups[s], p = o.xKeys, t = x(
-          h,
-          h.map((l) => p.map((f) => {
-            var a;
-            return ((a = o.cells[f][l]) == null ? void 0 : a.normalizedValue) ?? n.fillNA;
+    if (a) {
+      const r = [];
+      m.forEach((s) => {
+        const i = c.yKeysByGroups[s], u = c.xKeys, t = x(
+          i,
+          i.map((f) => u.map((l) => {
+            var h;
+            return ((h = c.cells[l][f]) == null ? void 0 : h.normalizedValue) ?? a.fillNA;
           })),
-          n.distance,
-          n.linkage
+          a.distance,
+          a.linkage
         );
-        e.facets[c].yKeysByGroups[s] = t.keys, i.push(...t.keys), r.push(t);
-      }), e.facets[c].yKeys = i, u.hierarchyY = r.map((s) => m(s));
+        e.facets[y].yKeysByGroups[s] = t.keys, r.push(...t.keys), n.hierarchyByGroupY[s] = B(t);
+      }), e.facets[y].yKeys = r;
     }
-    K[c] = u;
-  }), K;
+    p[y] = n;
+  }), p;
 }
 export {
-  z as getDendrograms
+  w as getDendrograms
 };
 //# sourceMappingURL=getDendrograms.js.map

package/dist/heatmap/getDendrograms.js.map

@@ -1 +1 @@
-{"version":3,"file":"getDendrograms.js","sources":["../../src/heatmap/getDendrograms.ts"],"sourcesContent":["import type {Cluster} from './components/types';\nimport type {GroupedCellsData} from './getCells';\nimport type {HeatmapSettingsImpl} from './HeatmapSettingsImpl';\nimport {getClusters} from './getClusters';\nimport type {HierarchyNode} from 'd3-hierarchy';\nimport {hierarchy} from 'd3-hierarchy';\n\nexport type DendrogramsData = Record<string, {\n    hierarchyX: HierarchyNode<Cluster>[];\n    hierarchyY: HierarchyNode<Cluster>[];\n}>\n\nexport function getDendrograms(\n    groupedCellsData: GroupedCellsData,\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    facetSettings: HeatmapSettingsImpl['facetSettings']\n): DendrogramsData {\n    const {facetKeys, xGroupKeys, yGroupKeys} = groupedCellsData.meta;\n    const result:DendrogramsData = {};\n\n    if (dendrogramX && facetSettings.sharedX) {\n        throw Error('Dendrogram on X axis is not available with shared by facets X axis');\n    }\n\n    facetKeys.forEach(facetKey => {\n        const facetResult: DendrogramsData[string] = {\n            hierarchyX: [],\n            hierarchyY: [],\n        };\n        const cellsGroup = groupedCellsData.facets[facetKey];\n        if (dendrogramX) {\n            const groupClusters:Cluster[] = [];\n            const updatedXKeys:string[] = [];\n            xGroupKeys.forEach(xGroupKey => {\n                const xKeys = cellsGroup.xKeysByGroups[xGroupKey];\n                const yKeys = cellsGroup.yKeys;\n                const rootCluster = getClusters(\n                    xKeys,\n                    xKeys.map(x => yKeys.map(y => (cellsGroup.cells[x][y]?.normalizedValue ?? dendrogramX.fillNA) as number)),\n                    dendrogramX.distance,\n                    dendrogramX.linkage\n                );\n                //set sorted group keys\n                groupedCellsData.facets[facetKey].xKeysByGroups[xGroupKey] = rootCluster.keys;\n                updatedXKeys.push(...rootCluster.keys);\n                groupClusters.push(rootCluster);\n            });\n            // set sorted group keys of all groups\n            groupedCellsData.facets[facetKey].xKeys = updatedXKeys;\n            facetResult.hierarchyX = groupClusters.map((item) => hierarchy(item));\n        }\n        if (dendrogramY) {\n            const groupClusters:Cluster[] = [];\n            const updatedYKeys:string[] = [];\n            yGroupKeys.forEach(yGroupKey => {\n                const yKeys = cellsGroup.yKeysByGroups[yGroupKey];\n                const xKeys = cellsGroup.xKeys;\n                const rootCluster = getClusters(\n                    yKeys,\n                    yKeys.map(y => xKeys.map(x => (cellsGroup.cells[x][y]?.normalizedValue ?? dendrogramY.fillNA) as number)),\n                    dendrogramY.distance,\n                    dendrogramY.linkage\n                );\n                //set sorted group keys\n                groupedCellsData.facets[facetKey].yKeysByGroups[yGroupKey] = rootCluster.keys;\n                updatedYKeys.push(...rootCluster.keys);\n                groupClusters.push(rootCluster);\n            });\n            // set sorted group keys of all groups\n            groupedCellsData.facets[facetKey].yKeys = updatedYKeys;\n            facetResult.hierarchyY = groupClusters.map((item) => hierarchy(item));\n        }\n        result[facetKey] = facetResult;\n    });\n\n    return result;\n}\n"],"names":["getDendrograms","groupedCellsData","dendrogramX","dendrogramY","facetSettings","facetKeys","xGroupKeys","yGroupKeys","result","facetKey","facetResult","cellsGroup","groupClusters","updatedXKeys","xGroupKey","xKeys","yKeys","rootCluster","getClusters","x","y","_a","item","hierarchy","updatedYKeys","yGroupKey"],"mappings":";;AAYO,SAASA,EACZC,GACAC,GACAC,GACAC,GACe;AACf,QAAM,EAAC,WAAAC,GAAW,YAAAC,GAAY,YAAAC,EAAA,IAAcN,EAAiB,MACvDO,IAAyB,CAAA;AAE/B,MAAIN,KAAeE,EAAc;AAC7B,UAAM,MAAM,oEAAoE;AAGpF,SAAAC,EAAU,QAAQ,CAAAI,MAAY;AAC1B,UAAMC,IAAuC;AAAA,MACzC,YAAY,CAAA;AAAA,MACZ,YAAY,CAAA;AAAA,IAAC,GAEXC,IAAaV,EAAiB,OAAOQ,CAAQ;AACnD,QAAIP,GAAa;AACb,YAAMU,IAA0B,CAAA,GAC1BC,IAAwB,CAAA;AAC9B,MAAAP,EAAW,QAAQ,CAAAQ,MAAa;AAC5B,cAAMC,IAAQJ,EAAW,cAAcG,CAAS,GAC1CE,IAAQL,EAAW,OACnBM,IAAcC;AAAA,UAChBH;AAAA,UACAA,EAAM,IAAI,CAAAI,MAAKH,EAAM,IAAI,CAAAI,MAAA;;AAAM,qBAAAC,IAAAV,EAAW,MAAMQ,CAAC,EAAEC,CAAC,MAArB,gBAAAC,EAAwB,oBAAmBnB,EAAY;AAAA,WAAiB,CAAC;AAAA,UACxGA,EAAY;AAAA,UACZA,EAAY;AAAA,QAAA;AAGhB,QAAAD,EAAiB,OAAOQ,CAAQ,EAAE,cAAcK,CAAS,IAAIG,EAAY,MACzEJ,EAAa,KAAK,GAAGI,EAAY,IAAI,GACrCL,EAAc,KAAKK,CAAW;AAAA,MAClC,CAAC,GAEDhB,EAAiB,OAAOQ,CAAQ,EAAE,QAAQI,GAC1CH,EAAY,aAAaE,EAAc,IAAI,CAACU,MAASC,EAAUD,CAAI,CAAC;AAAA,IACxE;AACA,QAAInB,GAAa;AACb,YAAMS,IAA0B,CAAA,GAC1BY,IAAwB,CAAA;AAC9B,MAAAjB,EAAW,QAAQ,CAAAkB,MAAa;AAC5B,cAAMT,IAAQL,EAAW,cAAcc,CAAS,GAC1CV,IAAQJ,EAAW,OACnBM,IAAcC;AAAA,UAChBF;AAAA,UACAA,EAAM,IAAI,CAAAI,MAAKL,EAAM,IAAI,CAAAI,MAAA;;AAAM,qBAAAE,IAAAV,EAAW,MAAMQ,CAAC,EAAEC,CAAC,MAArB,gBAAAC,EAAwB,oBAAmBlB,EAAY;AAAA,WAAiB,CAAC;AAAA,UACxGA,EAAY;AAAA,UACZA,EAAY;AAAA,QAAA;AAGhB,QAAAF,EAAiB,OAAOQ,CAAQ,EAAE,cAAcgB,CAAS,IAAIR,EAAY,MACzEO,EAAa,KAAK,GAAGP,EAAY,IAAI,GACrCL,EAAc,KAAKK,CAAW;AAAA,MAClC,CAAC,GAEDhB,EAAiB,OAAOQ,CAAQ,EAAE,QAAQe,GAC1Cd,EAAY,aAAaE,EAAc,IAAI,CAACU,MAASC,EAAUD,CAAI,CAAC;AAAA,IACxE;AACA,IAAAd,EAAOC,CAAQ,IAAIC;AAAA,EACvB,CAAC,GAEMF;AACX;"}
+{"version":3,"file":"getDendrograms.js","sources":["../../src/heatmap/getDendrograms.ts"],"sourcesContent":["import type {Cluster} from './components/types';\nimport type {GroupedCellsData} from './getCells';\nimport type {HeatmapSettingsImpl} from './HeatmapSettingsImpl';\nimport {getClusters} from './getClusters';\nimport type {HierarchyNode} from 'd3-hierarchy';\nimport {hierarchy} from 'd3-hierarchy';\n\nexport type DendrogramsData = Record<string, {\n    hierarchyByGroupX: Record<string, HierarchyNode<Cluster>>;\n    hierarchyByGroupY: Record<string, HierarchyNode<Cluster>>;\n}>\n\nexport function getDendrograms(\n    groupedCellsData: GroupedCellsData,\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    facetSettings: HeatmapSettingsImpl['facetSettings']\n): DendrogramsData {\n    const {facetKeys, xGroupKeys, yGroupKeys} = groupedCellsData.meta;\n    const result:DendrogramsData = {};\n\n    if (dendrogramX && facetSettings.sharedX) {\n        throw Error('Dendrogram on X axis is not available with shared by facets X axis');\n    }\n\n    facetKeys.forEach(facetKey => {\n        const facetResult: DendrogramsData[string] = {\n            hierarchyByGroupX: {},\n            hierarchyByGroupY: {},\n        };\n        const cellsGroup = groupedCellsData.facets[facetKey];\n        if (dendrogramX) {\n            const updatedXKeys:string[] = [];\n            xGroupKeys.forEach(xGroupKey => {\n                const xKeys = cellsGroup.xKeysByGroups[xGroupKey];\n                const yKeys = cellsGroup.yKeys;\n                const rootCluster = getClusters(\n                    xKeys,\n                    xKeys.map(x => yKeys.map(y => (cellsGroup.cells[x][y]?.normalizedValue ?? dendrogramX.fillNA) as number)),\n                    dendrogramX.distance,\n                    dendrogramX.linkage\n                );\n                //set sorted group keys\n                groupedCellsData.facets[facetKey].xKeysByGroups[xGroupKey] = rootCluster.keys;\n                updatedXKeys.push(...rootCluster.keys);\n                facetResult.hierarchyByGroupX[xGroupKey] = hierarchy(rootCluster);\n            });\n            // set sorted group keys of all groups\n            groupedCellsData.facets[facetKey].xKeys = updatedXKeys;\n        }\n        if (dendrogramY) {\n            const updatedYKeys:string[] = [];\n            yGroupKeys.forEach(yGroupKey => {\n                const yKeys = cellsGroup.yKeysByGroups[yGroupKey];\n                const xKeys = cellsGroup.xKeys;\n                const rootCluster = getClusters(\n                    yKeys,\n                    yKeys.map(y => xKeys.map(x => (cellsGroup.cells[x][y]?.normalizedValue ?? dendrogramY.fillNA) as number)),\n                    dendrogramY.distance,\n                    dendrogramY.linkage\n                );\n                //set sorted group keys\n                groupedCellsData.facets[facetKey].yKeysByGroups[yGroupKey] = rootCluster.keys;\n                updatedYKeys.push(...rootCluster.keys);\n                facetResult.hierarchyByGroupY[yGroupKey] = hierarchy(rootCluster);\n            });\n            // set sorted group keys of all groups\n            groupedCellsData.facets[facetKey].yKeys = updatedYKeys;\n        }\n        result[facetKey] = facetResult;\n    });\n\n    return result;\n}\n"],"names":["getDendrograms","groupedCellsData","dendrogramX","dendrogramY","facetSettings","facetKeys","xGroupKeys","yGroupKeys","result","facetKey","facetResult","cellsGroup","updatedXKeys","xGroupKey","xKeys","yKeys","rootCluster","getClusters","x","y","_a","hierarchy","updatedYKeys","yGroupKey"],"mappings":";;AAYO,SAASA,EACZC,GACAC,GACAC,GACAC,GACe;AACf,QAAM,EAAC,WAAAC,GAAW,YAAAC,GAAY,YAAAC,EAAA,IAAcN,EAAiB,MACvDO,IAAyB,CAAA;AAE/B,MAAIN,KAAeE,EAAc;AAC7B,UAAM,MAAM,oEAAoE;AAGpF,SAAAC,EAAU,QAAQ,CAAAI,MAAY;AAC1B,UAAMC,IAAuC;AAAA,MACzC,mBAAmB,CAAA;AAAA,MACnB,mBAAmB,CAAA;AAAA,IAAC,GAElBC,IAAaV,EAAiB,OAAOQ,CAAQ;AACnD,QAAIP,GAAa;AACb,YAAMU,IAAwB,CAAA;AAC9B,MAAAN,EAAW,QAAQ,CAAAO,MAAa;AAC5B,cAAMC,IAAQH,EAAW,cAAcE,CAAS,GAC1CE,IAAQJ,EAAW,OACnBK,IAAcC;AAAA,UAChBH;AAAA,UACAA,EAAM,IAAI,CAAAI,MAAKH,EAAM,IAAI,CAAAI,MAAA;;AAAM,qBAAAC,IAAAT,EAAW,MAAMO,CAAC,EAAEC,CAAC,MAArB,gBAAAC,EAAwB,oBAAmBlB,EAAY;AAAA,WAAiB,CAAC;AAAA,UACxGA,EAAY;AAAA,UACZA,EAAY;AAAA,QAAA;AAGhB,QAAAD,EAAiB,OAAOQ,CAAQ,EAAE,cAAcI,CAAS,IAAIG,EAAY,MACzEJ,EAAa,KAAK,GAAGI,EAAY,IAAI,GACrCN,EAAY,kBAAkBG,CAAS,IAAIQ,EAAUL,CAAW;AAAA,MACpE,CAAC,GAEDf,EAAiB,OAAOQ,CAAQ,EAAE,QAAQG;AAAA,IAC9C;AACA,QAAIT,GAAa;AACb,YAAMmB,IAAwB,CAAA;AAC9B,MAAAf,EAAW,QAAQ,CAAAgB,MAAa;AAC5B,cAAMR,IAAQJ,EAAW,cAAcY,CAAS,GAC1CT,IAAQH,EAAW,OACnBK,IAAcC;AAAA,UAChBF;AAAA,UACAA,EAAM,IAAI,CAAAI,MAAKL,EAAM,IAAI,CAAAI,MAAA;;AAAM,qBAAAE,IAAAT,EAAW,MAAMO,CAAC,EAAEC,CAAC,MAArB,gBAAAC,EAAwB,oBAAmBjB,EAAY;AAAA,WAAiB,CAAC;AAAA,UACxGA,EAAY;AAAA,UACZA,EAAY;AAAA,QAAA;AAGhB,QAAAF,EAAiB,OAAOQ,CAAQ,EAAE,cAAcc,CAAS,IAAIP,EAAY,MACzEM,EAAa,KAAK,GAAGN,EAAY,IAAI,GACrCN,EAAY,kBAAkBa,CAAS,IAAIF,EAAUL,CAAW;AAAA,MACpE,CAAC,GAEDf,EAAiB,OAAOQ,CAAQ,EAAE,QAAQa;AAAA,IAC9C;AACA,IAAAd,EAAOC,CAAQ,IAAIC;AAAA,EACvB,CAAC,GAEMF;AACX;"}

package/dist/heatmap/index.d.ts

@@ -1,10 +1,10 @@
 import { AbstractChart } from '../AbstractChart';
+import { DataFrame } from '../DataFrame';
+import { DataValue, HeatmapEventHandlers, HeatmapSettings } from '../types';
+import { default as ChartRenderer } from './ChartRenderer';
 import { GroupedCellsData } from './getCells';
 import { DendrogramsData } from './getDendrograms';
-import { default as ChartRenderer } from './ChartRenderer';
-import { DataValue, HeatmapEventHandlers, HeatmapSettings } from '../types';
 import { HeatmapSettingsImpl } from './HeatmapSettingsImpl';
-import { DataFrame } from '../DataFrame';
 export declare class ChartHeatmap extends AbstractChart {
     settings: HeatmapSettingsImpl;
     chartRenderer: ChartRenderer;

package/dist/heatmap/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/heatmap/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAC,aAAa,EAAC,MAAM,kBAAkB,CAAC;AAC/C,OAAO,KAAK,EAAC,gBAAgB,EAAC,MAAM,YAAY,CAAC;AAEjD,OAAO,KAAK,EAAC,eAAe,EAAC,MAAM,kBAAkB,CAAC;AAItD,OAAO,aAAa,MAAM,iBAAiB,CAAC;AAC5C,OAAO,KAAK,EAAa,SAAS,EAAE,oBAAoB,EAAE,eAAe,EAAC,MAAM,UAAU,CAAC;AAC3F,OAAO,EAAC,mBAAmB,EAAC,MAAM,uBAAuB,CAAC;AAC1D,OAAO,KAAK,EAAC,SAAS,EAAC,MAAM,cAAc,CAAC;AAE5C,qBAAa,YAAa,SAAQ,aAAa;IAC3C,QAAQ,EAAE,mBAAmB,CAAC;IAC9B,aAAa,gBAAuB;IAEpC,mBAAmB,EAAE,CAAC,CAAC,EAAC,OAAO,KAAK,IAAI,CAAmB;IAC3D,cAAc,EAAE;QACZ,gBAAgB,EAAE,gBAAgB,CAAC;QACnC,eAAe,EAAE,eAAe,CAAC;QACjC,cAAc,EAAE,SAAS,EAAE,CAAC;KAC/B,GAAG,IAAI,CAAQ;gBAEJ,IAAI,EAAE,SAAS,EAAE,QAAQ,EAAE,eAAe,EAAE,aAAa,CAAC,EAAC,oBAAoB;IAS3F,KAAK,CAAC,IAAI,EAAE,WAAW;IAYvB,OAAO;IAIP,qBAAqB,CAAC,IAAI,EAAE,SAAS,EAAE,QAAQ,EAAE,eAAe;IAsBhE,gBAAgB,CAAC,MAAM,EAAE,MAAM,EAAE,MAAM,EAAE,OAAO;IAIhD,MAAM,IAAI,MAAM;IAKhB,mCAAmC,CAAC,YAAY,EAAE,mBAAmB,EAAE,QAAQ,EAAE,mBAAmB;IA6DpG,+BAA+B,CAAC,QAAQ,EAAE,SAAS,EAAE,IAAI,EAAE,SAAS;IAUpE,WAAW;IA0CX,gBAAgB;IAIhB,YAAY;CAiCf"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/heatmap/index.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,aAAa,EAAE,MAAM,kBAAkB,CAAC;AACjD,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,cAAc,CAAC;AAC9C,OAAO,KAAK,EAAc,SAAS,EAAE,oBAAoB,EAAE,eAAe,EAAE,MAAM,UAAU,CAAC;AAE7F,OAAO,aAAa,MAAM,iBAAiB,CAAC;AAC5C,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,YAAY,CAAC;AAEnD,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,kBAAkB,CAAC;AAExD,OAAO,EAAE,mBAAmB,EAAE,MAAM,uBAAuB,CAAC;AAE5D,qBAAa,YAAa,SAAQ,aAAa;IAC3C,QAAQ,EAAE,mBAAmB,CAAC;IAC9B,aAAa,gBAAuB;IAEpC,mBAAmB,EAAE,CAAC,CAAC,EAAC,OAAO,KAAK,IAAI,CAAmB;IAC3D,cAAc,EAAE;QACZ,gBAAgB,EAAE,gBAAgB,CAAC;QACnC,eAAe,EAAE,eAAe,CAAC;QACjC,cAAc,EAAE,SAAS,EAAE,CAAC;KAC/B,GAAG,IAAI,CAAQ;gBAEJ,IAAI,EAAE,SAAS,EAAE,QAAQ,EAAE,eAAe,EAAE,aAAa,CAAC,EAAC,oBAAoB;IAS3F,KAAK,CAAC,IAAI,EAAE,WAAW;IAavB,OAAO;IAIP,qBAAqB,CAAC,IAAI,EAAE,SAAS,EAAE,QAAQ,EAAE,eAAe;IAuBhE,gBAAgB,CAAC,MAAM,EAAE,MAAM,EAAE,MAAM,EAAE,OAAO;IAIhD,MAAM,IAAI,MAAM;IAKhB,mCAAmC,CAAC,YAAY,EAAE,mBAAmB,EAAE,QAAQ,EAAE,mBAAmB;IA6DpG,+BAA+B,CAAC,QAAQ,EAAE,SAAS,EAAE,IAAI,EAAE,SAAS;IAUpE,WAAW;IA0CX,gBAAgB;IAIhB,YAAY;CAkCf"}

package/dist/heatmap/index.js

@@ -1,18 +1,18 @@
 var q = Object.defineProperty;
 var z = (l, o, a) => o in l ? q(l, o, { enumerable: !0, configurable: !0, writable: !0, value: a }) : l[o] = a;
 var y = (l, o, a) => z(l, typeof o != "symbol" ? o + "" : o, a);
-import { AbstractChart as K } from "../AbstractChart.js";
-import { getCells as F } from "./getCells.js";
-import { getDendrograms as J } from "./getDendrograms.js";
+import { renderToString as K } from "../node_modules/react-dom/server.browser.js";
+import { AbstractChart as F } from "../AbstractChart.js";
 import { isColumnName as D } from "../utils/index.js";
-import { renderToString as L } from "../node_modules/react-dom/server.browser.js";
-import M from "./ChartRenderer.js";
+import J from "./ChartRenderer.js";
+import { getCells as L } from "./getCells.js";
+import { getDendrograms as M } from "./getDendrograms.js";
 import { HeatmapSettingsImpl as U } from "./HeatmapSettingsImpl.js";
-class ea extends K {
+class ea extends F {
   constructor(a, t, e) {
     super(a, t);
     y(this, "settings");
-    y(this, "chartRenderer", new M());
+    y(this, "chartRenderer", new J());
     y(this, "onTooltipHintSwitch", () => {
     });
     y(this, "calculatedData", null);
@@ -22,7 +22,7 @@ class ea extends K {
     try {
       this.chartRenderer.init(a), this._updateData(), this._updateChart();
     } catch (t) {
-      t instanceof Error && this.chartRenderer.renderError(t.message);
+      t instanceof Error && (this.chartRenderer.renderError(t.message), console.error(t));
     }
   }
   unmount() {
@@ -33,14 +33,14 @@ class ea extends K {
       const e = this.settings, r = this.data;
       this.settings = new U(t), this.data = a, this._needUpdateCalculatedDataBySettings(e, this.settings) || this._needUpdateCalculatedDataByData(r, this.data) ? this._updateData() : this._updateAesInData(), this._updateChart();
     } catch (e) {
-      e instanceof Error && this.chartRenderer.renderError(e.message);
+      e instanceof Error && (this.chartRenderer.renderError(e.message), console.error(e));
     }
   }
   updateChartState(a, t) {
     console.warn("no chart state for heatmap");
   }
   export() {
-    return this._updateChart(), L(this.chartRenderer.component);
+    return this._updateChart(), K(this.chartRenderer.component);
   }
   _needUpdateCalculatedDataBySettings(a, t) {
     var X, Y, A, x, R, b, w, G, T, j, k, v;
@@ -93,7 +93,7 @@ class ea extends K {
       dendrogramY: C,
       normalization: p,
       NAValueAs: f
-    } = this.settings, n = F(
+    } = this.settings, n = L(
       this.data,
       a,
       t,
@@ -106,7 +106,7 @@ class ea extends K {
       C,
       p,
       f
-    ), _ = J(n, u, C, h), B = m.valueType === "discrete" ? this.data.getColumnCategories(e.value) : [];
+    ), _ = M(n, u, C, h), B = m.valueType === "discrete" ? this.data.getColumnCategories(e.value) : [];
     this.calculatedData = {
       groupedCellsData: n,
       dendrogramsData: _,
@@ -131,6 +131,7 @@ class ea extends K {
       normalization: u
     } = this.settings;
     this.chartRenderer.render(
+      this.data,
       a,
       e,
       r,