@milaboratories/graph-maker 1.1.162 → 1.1.164

package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/getCells.js.map

@@ -1 +1 @@
-{"version":3,"file":"getCells.js","sources":["../../../../../../node_modules/@milaboratories/miplots4/src/heatmap/getCells.ts"],"sourcesContent":["import { deviation, extent, mean } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\n\nfunction normalizeByStd(values:number[]) {\n    const stdValue = deviation(values);\n    const meanValue = mean(values);\n\n    if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n        return (v:number) => v;\n    }\n    return (v:number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values:number[]) {\n    const meanValue = mean(values);\n    const [min, max] = extent(values);\n    if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n        return (v:number) => v;\n    }\n    return (v:number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method:NormalizationMethod, values:number[]) {\n    if (method === 'standardScaling') {\n        return normalizeByStd(values);\n    }\n    if (method === 'meanNormalization') {\n        return normalizeByMinMax(values);\n    }\n    return (v:number) => v;\n}\n\nexport type Cell = {\n    isCell: true;\n    idx: number;\n    id: string;\n    value: DataValue;\n    normalizedValue: DataValue;\n    x: DataValue;\n    y: DataValue;\n};\n\nexport type GroupedCellsData = {\n    meta: {\n        facetKeys: string[];\n        xGroupKeys: string[];\n        yGroupKeys: string[];\n        xKeysByGroups: Record<string, string[]>;\n        yKeysByGroups: Record<string, string[]>;\n        // for titles, if facet by more 1 columns title has several values separated by commas\n        facetKeyValues: Record<string, string[]>;\n        xGroupKeyValues: Record<string, string[]>;\n        yGroupKeyValues: Record<string, string[]>;\n        xLabels: Record<string, string>;\n        yLabels: Record<string, string>;\n        xGroupLabels: Record<string, string>;\n        yGroupLabels: Record<string, string>;\n        valueExtent: [number, number]; // for color scales\n        // data for labels, annotations and dendrograms\n        xDataByKeys: Record<string, Record<string, DataValue>>;\n        yDataByKeys: Record<string, Record<string, DataValue>>;\n    };\n    //facet groups\n    facets: Record<\n        string,\n        {\n            // axis keys\n            xKeys: string[];\n            yKeys: string[];\n            // axis keys grouped by group keys from meta\n            xKeysByGroups: Record<string, string[]>;\n            yKeysByGroups: Record<string, string[]>;\n            // cells grouped by X, then by Y\n            cells: Record<string, Record<string, Cell>>;\n        }\n    >;\n};\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n    if (!keysLists.length) {\n        return [];\n    }\n    let result: string[][] = [[]];\n    keysLists.forEach(keys => {\n        const nextResult: string[][] = [];\n        keys.forEach(key => {\n            nextResult.push(...result.map(resultItem => [...resultItem, key]));\n        });\n        result = nextResult;\n    });\n    return result;\n}\nconst sortByLabels = (arr: string[], direction: 'asc' | 'desc', labels: Record<string, string> = {}) => {\n    return arr.sort((a, b) => direction === 'asc'\n        ? (labels[a] ?? a).localeCompare((labels[b] ?? b), 'en', { numeric: true })\n        : (labels[b] ?? b).localeCompare((labels[a] ?? a), 'en', { numeric: true })\n    );\n};\n\nexport function getCells(\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumn: ColumnName,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalization: HeatmapSettingsImpl['normalization'],\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'],\n): GroupedCellsData {\n    const facetKeysLists = facetBy.length\n        ? facetBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const xGroupKeysLists = xGroupBy.length\n        ? xGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const yGroupKeysLists = yGroupBy.length\n        ? yGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const facetKeysCombinations = getKeysCombinations(facetKeysLists);\n    const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n    const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n    const facetKeys = facetKeysCombinations.map(keys => keys.join('_'));\n    const xGroupKeys = xGroupKeysCombinations.map(keys => keys.join('_'));\n    const yGroupKeys = yGroupKeysCombinations.map(keys => keys.join('_'));\n\n    const result: GroupedCellsData = {\n        meta: {\n            facetKeys,\n            xGroupKeys,\n            yGroupKeys,\n            xKeysByGroups: {},\n            yKeysByGroups: {},\n            xLabels: {},\n            yLabels: {},\n            xGroupLabels: {},\n            yGroupLabels: {},\n            xDataByKeys: {},\n            yDataByKeys: {},\n            facetKeyValues: facetKeys.reduce((res: Record<string, string[]>, key, index) => {\n                res[key] = facetKeysCombinations[index];\n                return res;\n            }, {}),\n            xGroupKeyValues: xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n                res[key] = xGroupKeysCombinations[index];\n                return res;\n            }, {}),\n            yGroupKeyValues: yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n                res[key] = yGroupKeysCombinations[index];\n                return res;\n            }, {}),\n            valueExtent: [Infinity, -Infinity],\n        },\n        facets: {},\n    };\n\n    const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n    const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n    const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.value);\n    const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.value);\n    const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n    const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n    const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n    const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n    for (let i = 0; i < data.rowsCount; i++) {\n        const facetKey = facetBy.length ? facetBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n        const xGroupKey = xGroupBy.length ? xGroupBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n        const yGroupKey = yGroupBy.length ? yGroupBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n        const xGroupLabel = xGroupBy.length ? xGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ') : '';\n        const yGroupLabel = yGroupBy.length ? yGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ') : '';\n        result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n        result.meta.yGroupLabels[yGroupKey] = yGroupLabel;\n        const x = String(data.getColumnValue(xColumn.value, i));\n        const y = String(data.getColumnValue(yColumn.value, i));\n        const value = (data.getColumnValue(valueColumn.value, i) ?? NAValueAs) as number | null;\n        \n        if (x === 'null' || y === 'null' || value === null) {\n            continue;\n        }\n\n        if (!result.facets[facetKey]) {\n            result.facets[facetKey] = {\n                xKeys: [],\n                yKeys: [],\n                xKeysByGroups: {},\n                yKeysByGroups: {},\n                cells: {},\n            };\n        }\n        if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n        }\n        if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n        }\n        result.facets[facetKey].xKeys.push(x);\n        result.facets[facetKey].yKeys.push(y);\n        result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n        result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n        if (!result.facets[facetKey].cells[x]) {\n            result.facets[facetKey].cells[x] = {};\n        }\n        result.meta.valueExtent[0] = Math.min(value, result.meta.valueExtent[0]);\n        result.meta.valueExtent[1] = Math.max(value, result.meta.valueExtent[1]);\n        if (result.facets[facetKey].cells[x][y] && result.facets[facetKey].cells[x][y].value !== value) {\n            throw Error(`More than 1 value for x=${x}, y=${y}`);\n        }\n        const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n        if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n            throw Error(`More than 1 x-label value for x=${x}`);\n        }\n        const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n        if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n            throw Error(`More than 1 y-label value for y=${y}`);\n        }\n        result.meta.xLabels[x] = String(xLabelsSourceValue);\n        result.meta.yLabels[y] = String(yLabelsSourceValue);\n        // data for labels, annotations and dendrograms by X\n        additionalDataColumnsX.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.xDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n            }\n        });\n        // data for labels, annotations and dendrograms by Y\n        additionalDataColumnsY.forEach(columnKey => {\n            const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.yDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n            }\n        });\n        result.facets[facetKey].cells[x][y] = {\n            isCell: true,\n            idx: i,\n            id: `${x}_${y}`,\n            x,\n            y,\n            value,\n            normalizedValue: value,\n        };\n    }\n\n    result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n    // make uniq x, y, x-group and y-group keys\n    result.meta.facetKeys.forEach(facetKey => {\n        const facet = result.facets[facetKey];\n        const uniqueXKeys = lodash.uniq(facet.xKeys);\n        const uniqueYKeys = lodash.uniq(facet.yKeys);\n        facet.xKeys = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], uniqueXKeys) : uniqueXKeys;\n        facet.yKeys = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], uniqueYKeys) : uniqueYKeys;\n        xGroupKeys.forEach(xGroupKey => {\n            result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.intersection(\n                facet.xKeys,\n                result.facets[facetKey].xKeysByGroups[xGroupKey]\n            );\n        });\n        yGroupKeys.forEach(yGroupKey => {\n            result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.intersection(\n                facet.yKeys,\n                result.facets[facetKey].yKeysByGroups[yGroupKey]\n            );\n        });\n    });\n\n    if (normalization) {\n        const valueExtent = [Infinity, -Infinity] as [number, number];\n        result.meta.facetKeys.forEach(facetKey => {\n            const {xKeys, yKeys, cells} = result.facets[facetKey];\n            const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n            const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n            const cellGetter = normalization.direction === 'row'\n                ? (cellKey:string, groupKey:string) => cells[cellKey]?.[groupKey]\n                : (cellKey:string, groupKey:string) => cells[groupKey]?.[cellKey];\n            groupKeys.forEach((groupKey) => {\n                const values:number[] = [];\n                cellKeys.forEach((cellKey) => {\n                    const v = cellGetter(cellKey, groupKey)?.value;\n                    if (v !== undefined) {\n                        values.push(v as number);\n                    }\n                });\n                const normalize = getNormalizationFn(normalization.method, values);\n                cellKeys.forEach((cellKey) => {\n                    const cell = cellGetter(cellKey, groupKey);\n                    if (cell !== undefined) {\n                        cell.normalizedValue = normalize(cell.value as number);\n                        valueExtent[0] = Math.min(cell.normalizedValue, valueExtent[0]);\n                        valueExtent[1] = Math.max(cell.normalizedValue, valueExtent[1]);\n                    }\n                });\n            });\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n\n    // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n    result.meta.xKeysByGroups = xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n        const existingXKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n        ), xAxis.sorting, result.meta.xLabels);\n        res[xGroupKey] = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], existingXKeys) : existingXKeys;\n        return res;\n    }, {});\n    result.meta.yKeysByGroups = yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n        const existingYKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => 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+{"version":3,"file":"getCells.js","sources":["../../../../../../node_modules/@milaboratories/miplots4/src/heatmap/getCells.ts"],"sourcesContent":["import { deviation, extent, mean, quantileSorted } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { AggregationMethod, ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { exhaustive } from '../utils';\n\nfunction normalizeByStd(values: number[]) {\n    const stdValue = deviation(values);\n    const meanValue = mean(values);\n\n    if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values: number[]) {\n    const meanValue = mean(values);\n    const [min, max] = extent(values);\n    if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n        return (v: number) => v;\n    }\n    return (v: number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method: NormalizationMethod, values: number[]) {\n    if (method === 'standardScaling') {\n        return normalizeByStd(values);\n    }\n    if (method === 'meanNormalization') {\n        return normalizeByMinMax(values);\n    }\n    return (v: number) => v;\n}\n\nfunction aggregateNumeric(method: AggregationMethod, values: number[]) {\n    switch (method) {\n        case 'max': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.max(res, v);\n            }\n            return res;\n        }\n        case 'min': {\n            let res = values[0];\n            for (const v of values) {\n                res = Math.min(res, v);\n            }\n            return res;\n        }\n        case 'median': {\n            const valuesSorted = values.sort((a, b) => a - b);\n            return quantileSorted(valuesSorted, 0.5) as number;\n        }\n        case 'mean': {\n            return mean(values) ?? values[0];\n        }\n        default: exhaustive(method, `Unknown aggregation function ${method}`);\n    }\n}\nfunction aggregateString(values: string[]) {\n    const list = [...new Set(values)].sort();\n    if (list.length > 3) {\n        return [...list.slice(0, 3), '...'].join(', ');\n    }\n    return list.join(', ');\n}\n\nexport type Cell = {\n    isCell: true;\n    idx: number;\n    id: string;\n    value: DataValue;\n    normalizedValue: DataValue;\n    x: DataValue;\n    y: DataValue;\n};\n\nexport type GroupedCellsData = {\n    meta: {\n        facetKeys: string[];\n        xGroupKeys: string[];\n        yGroupKeys: string[];\n        xKeysByGroups: Record<string, string[]>;\n        yKeysByGroups: Record<string, string[]>;\n        // for titles, if facet by more 1 columns title has several values separated by commas\n        facetKeyValues: Record<string, string[]>;\n        xGroupKeyValues: Record<string, string[]>;\n        yGroupKeyValues: Record<string, string[]>;\n        xLabels: Record<string, string>;\n        yLabels: Record<string, string>;\n        xGroupLabels: Record<string, string>;\n        yGroupLabels: Record<string, string>;\n        valueExtent: [number, number]; // for color scales\n        // data for labels, annotations and dendrograms\n        xDataByKeys: Record<string, Record<string, DataValue>>;\n        yDataByKeys: Record<string, Record<string, DataValue>>;\n    };\n    //facet groups\n    facets: Record<\n        string,\n        {\n            // axis keys\n            xKeys: string[];\n            yKeys: string[];\n            // axis keys grouped by group keys from meta\n            xKeysByGroups: Record<string, string[]>;\n            yKeysByGroups: Record<string, string[]>;\n            // cells grouped by X, then by Y\n            cells: Record<string, Record<string, Cell>>;\n        }\n    >;\n};\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n    if (!keysLists.length) {\n        return [];\n    }\n    let result: string[][] = [[]];\n    keysLists.forEach(keys => {\n        const nextResult: string[][] = [];\n        keys.forEach(key => {\n            nextResult.push(...result.map(resultItem => [...resultItem, key]));\n        });\n        result = nextResult;\n    });\n    return result;\n}\nconst sortByLabels = (arr: string[], direction: 'asc' | 'desc', labels: Record<string, string> = {}) => {\n    return arr.sort((a, b) => direction === 'asc'\n        ? (labels[a] ?? a).localeCompare((labels[b] ?? b), 'en', { numeric: true })\n        : (labels[b] ?? b).localeCompare((labels[a] ?? a), 'en', { numeric: true })\n    );\n};\n\nfunction createEmptyGroupedCells(): GroupedCellsData {\n    return {\n        meta: {\n            facetKeys: [],\n            xGroupKeys: [],\n            yGroupKeys: [],\n            xKeysByGroups: {},\n            yKeysByGroups: {},\n            xLabels: {},\n            yLabels: {},\n            xGroupLabels: {},\n            yGroupLabels: {},\n            xDataByKeys: {},\n            yDataByKeys: {},\n            facetKeyValues: {},\n            xGroupKeyValues: {},\n            yGroupKeyValues: {},\n            valueExtent: [Infinity, -Infinity],\n        },\n        facets: {},\n    };\n}\n\nfunction applyAggregation(\n    result: GroupedCellsData,\n    aggregation: HeatmapSettingsImpl['aggregation'],\n    additionalDataColumnsX: string[],\n    additionalDataColumnsY: string[],\n    annotations: HeatmapSettingsImpl['annotations']\n) {\n    if (aggregation.x || aggregation.y) {\n        const valueExtent = [Infinity, -Infinity] as [number, number];\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells, xKeysByGroups, yKeysByGroups } = result.facets[facetKey];\n            const xGroups = aggregation.x ? xKeysByGroups : xKeys.reduce((res, xKey) => { res[xKey] = [xKey]; return res; }, {} as Record<string, string[]>);\n            const yGroups = aggregation.y ? yKeysByGroups : yKeys.reduce((res, yKey) => { res[yKey] = [yKey]; return res; }, {} as Record<string, string[]>);\n            const xNewKeys = Object.keys(xGroups);\n            const yNewKeys = Object.keys(yGroups);\n            for (const xGroupKey of xNewKeys) {\n                for (const yGroupKey of yNewKeys) {\n                    const values: number[] = [];\n                    xGroups[xGroupKey].forEach((xKey) => {\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            const cellValue = cells[xKey]?.[yKey]?.value;\n                            if (cellValue !== undefined) {\n                                values.push(cellValue as number);\n                                delete cells[xKey]?.[yKey];\n                            }\n                        });\n                    });\n                    if (values.length > 0) {\n                        const value = aggregateNumeric(aggregation.method, values);\n                        if (!result.facets[facetKey].cells[xGroupKey]) {\n                            result.facets[facetKey].cells[xGroupKey] = {};\n                        }\n                        result.facets[facetKey].cells[xGroupKey][yGroupKey] = {\n                            isCell: true,\n                            idx: 0,\n                            id: `${xGroupKey}_${yGroupKey}`,\n                            x: xGroupKey,\n                            y: yGroupKey,\n                            value,\n                            normalizedValue: value,\n                        };\n                        valueExtent[0] = Math.min(value, valueExtent[0]);\n                        valueExtent[1] = Math.max(value, valueExtent[1]);\n                    }\n                }\n            }\n            if (aggregation.x) {\n                xNewKeys.forEach(xGroupKey => {\n                    additionalDataColumnsX.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        xGroups[xGroupKey].forEach((xKey) => {\n                            values.push(result.meta.xDataByKeys[columnKey][xKey]);\n                            delete result.meta.xDataByKeys[columnKey][xKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.xDataByKeys[columnKey][xGroupKey] = value;\n                    });\n                });\n            }\n            if (aggregation.y) {\n                additionalDataColumnsY.forEach(columnKey => {\n                    result.meta.yDataByKeys[columnKey] = {};\n                });\n                yNewKeys.forEach(yGroupKey => {\n                    additionalDataColumnsY.forEach(columnKey => {\n                        const annotation = annotations.find((v) => v.valueColumn.value === columnKey || v.valueColumn.valueLabels === columnKey);\n                        if (!annotation) {\n                            return;\n                        }\n                        const values: DataValue[] = [];\n                        yGroups[yGroupKey].forEach((yKey) => {\n                            values.push(result.meta.yDataByKeys[columnKey][yKey]);\n                            delete result.meta.yDataByKeys[columnKey][yKey];\n                        });\n                        const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n                        result.meta.yDataByKeys[columnKey][yGroupKey] = value;\n                    });\n                });\n            }\n            if (aggregation.x) {\n                result.facets[facetKey].xKeys = Object.keys(xKeysByGroups);\n                result.facets[facetKey].xKeysByGroups = { 'null': result.facets[facetKey].xKeys };\n                result.meta.xLabels = result.meta.xGroupLabels;\n                result.meta.xGroupKeys = ['null'];\n                result.meta.xGroupKeyValues = { null: ['null'] };\n            }\n            if (aggregation.y) {\n                result.facets[facetKey].yKeys = Object.keys(yKeysByGroups);\n                result.facets[facetKey].yKeysByGroups = { 'null': result.facets[facetKey].yKeys };\n                result.meta.yLabels = result.meta.yGroupLabels;\n                result.meta.yGroupKeys = ['null'];\n                result.meta.yGroupKeyValues = { null: ['null'] };\n            }\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n}\nfunction applyNormalization(result: GroupedCellsData, normalization: HeatmapSettingsImpl['normalization']) {\n    if (normalization) {\n        const valueExtent = [Infinity, -Infinity] as [number, number];\n        result.meta.facetKeys.forEach(facetKey => {\n            const { xKeys, yKeys, cells } = result.facets[facetKey];\n            const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n            const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n            const cellGetter = normalization.direction === 'row'\n                ? (cellKey: string, groupKey: string) => cells[cellKey]?.[groupKey]\n                : (cellKey: string, groupKey: string) => cells[groupKey]?.[cellKey];\n            groupKeys.forEach((groupKey) => {\n                const values: number[] = [];\n                cellKeys.forEach((cellKey) => {\n                    const v = cellGetter(cellKey, groupKey)?.value;\n                    if (v !== undefined) {\n                        values.push(v as number);\n                    }\n                });\n                const normalize = getNormalizationFn(normalization.method, values);\n                cellKeys.forEach((cellKey) => {\n                    const cell = cellGetter(cellKey, groupKey);\n                    if (cell !== undefined) {\n                        cell.normalizedValue = normalize(cell.value as number);\n                        valueExtent[0] = Math.min(cell.normalizedValue, valueExtent[0]);\n                        valueExtent[1] = Math.max(cell.normalizedValue, valueExtent[1]);\n                    }\n                });\n            });\n        });\n        result.meta.valueExtent = valueExtent;\n    }\n}\n\nexport function getCells(\n    data: DataFrame,\n    xColumn: ColumnName,\n    yColumn: ColumnName,\n    valueColumn: ColumnName,\n    facetBy: ColumnName[],\n    xGroupBy: ColumnName[],\n    yGroupBy: ColumnName[],\n    annotations: HeatmapSettingsImpl['annotations'],\n    dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n    dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n    normalization: HeatmapSettingsImpl['normalization'],\n    NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n    keysOrder: HeatmapSettingsImpl['keysOrder'],\n    xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'],\n    yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'],\n    aggregation: HeatmapSettingsImpl['aggregation'],\n): GroupedCellsData {\n    const result: GroupedCellsData = createEmptyGroupedCells();\n\n    const facetKeysLists = facetBy.length\n        ? facetBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const xGroupKeysLists = xGroupBy.length\n        ? xGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const yGroupKeysLists = yGroupBy.length\n        ? yGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n        : [['null']];\n    const facetKeysCombinations = getKeysCombinations(facetKeysLists);\n    const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n    const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n    const facetKeys = facetKeysCombinations.map(keys => keys.join('_'));\n    const xGroupKeys = xGroupKeysCombinations.map(keys => keys.join('_'));\n    const yGroupKeys = yGroupKeysCombinations.map(keys => keys.join('_'));\n\n    result.meta.facetKeys = facetKeys;\n    result.meta.xGroupKeys = xGroupKeys;\n    result.meta.yGroupKeys = yGroupKeys;\n    result.meta.facetKeyValues = facetKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = facetKeysCombinations[index];\n        return res;\n    }, {});\n    result.meta.xGroupKeyValues = xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = xGroupKeysCombinations[index];\n        return res;\n    }, {});\n    result.meta.yGroupKeyValues = yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n        res[key] = yGroupKeysCombinations[index];\n        return res;\n    }, {});\n\n    const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n    const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n    const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n    const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n    const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n    const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n    const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n    for (let i = 0; i < data.rowsCount; i++) {\n        const facetKey = facetBy.length ? facetBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n        const xGroupKey = xGroupBy.length ? 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result.meta.yDataByKeys[columnKey] !== 'undefined';\n            const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n            if (!isAddedColumn) {\n                result.meta.yDataByKeys[columnKey] = {};\n            }\n            if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n                throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n            }\n            if (!isAddedValue) {\n                result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n            }\n        });\n        result.facets[facetKey].cells[x][y] = {\n            isCell: true,\n            idx: i,\n            id: `${x}_${y}`,\n            x,\n            y,\n            value,\n            normalizedValue: value,\n        };\n    }\n\n    result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n    // 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});\n    });\n\n    applyAggregation(result, aggregation, additionalDataColumnsX, additionalDataColumnsY, annotations);\n    applyNormalization(result, normalization);\n\n    // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n    result.meta.xKeysByGroups = result.meta.xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n        const existingXKeys = sortByLabels(lodash.uniq(\n            lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n        ), xAxis.sorting, result.meta.xLabels);\n        res[xGroupKey] = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], existingXKeys) : existingXKeys;\n        return res;\n    }, {});\n    result.meta.yKeysByGroups = result.meta.yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n        const existingYKeys = sortByLabels(lodash.uniq(\n            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package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/index.js

@@ -1,16 +1,16 @@
-import { renderToString as z } from "../node_modules/react-dom/server.browser.js";
-import { AbstractChart as H } from "../AbstractChart.js";
-import { isColumnName as x } from "../utils/index.js";
-import q from "./ChartRenderer.js";
-import { getCells as I } from "./getCells.js";
+import { renderToString as F } from "../node_modules/react-dom/server.browser.js";
+import { AbstractChart as L } from "../AbstractChart.js";
+import { isColumnName as A } from "../utils/index.js";
+import $ from "./ChartRenderer.js";
+import { getCells as K } from "./getCells.js";
 import { getDendrograms as M } from "./getDendrograms.js";
-import { HeatmapSettingsImpl as R } from "./HeatmapSettingsImpl.js";
-import { MAX_SVG_RENDERED_CELLS_COUNT as L } from "./constants.js";
-var $ = Object.defineProperty, F = (h, t, e) => t in h ? $(h, t, { enumerable: !0, configurable: !0, writable: !0, value: e }) : h[t] = e, B = (h, t, e) => F(h, typeof t != "symbol" ? t + "" : t, e);
-class at extends H {
+import { HeatmapSettingsImpl as k } from "./HeatmapSettingsImpl.js";
+import { MAX_SVG_RENDERED_CELLS_COUNT as P } from "./constants.js";
+var W = Object.defineProperty, J = (g, t, e) => t in g ? W(g, t, { enumerable: !0, configurable: !0, writable: !0, value: e }) : g[t] = e, X = (g, t, e) => J(g, typeof t != "symbol" ? t + "" : t, e);
+class lt extends L {
   constructor(t, e, a) {
-    super(t, e), B(this, "settings"), B(this, "chartRenderer", new q()), B(this, "onTooltipHintSwitch", () => {
-    }), B(this, "calculatedData", null), this.settings = new R(e), a && (this.onTooltipHintSwitch = a[0]);
+    super(t, e), X(this, "settings"), X(this, "chartRenderer", new $()), X(this, "onTooltipHintSwitch", () => {
+    }), X(this, "calculatedData", null), this.settings = new k(e), a && (this.onTooltipHintSwitch = a[0]);
   }
   mount(t) {
     try {
@@ -25,7 +25,7 @@ class at extends H {
   updateSettingsAndData(t, e) {
     try {
       const a = this.settings, r = this.data;
-      this.settings = new R(e), this.data = t, this._needUpdateCalculatedDataBySettings(a, this.settings) || this._needUpdateCalculatedDataByData(r, this.data) ? this._updateData() : this._updateAesInData(), this._updateChart();
+      this.settings = new k(e), this.data = t, this._needUpdateCalculatedDataBySettings(a, this.settings) || this._needUpdateCalculatedDataByData(r, this.data) ? this._updateData() : this._updateAesInData(), this._updateChart();
     } catch (a) {
       a instanceof Error && (this.chartRenderer.renderError(a.message), console.error(a));
     }
@@ -34,36 +34,37 @@ class at extends H {
     console.warn("no chart state for heatmap");
   }
   export() {
-    return this._updateChart(), z(this.chartRenderer.component);
+    return this._updateChart(), F(this.chartRenderer.component);
   }
   _needUpdateCalculatedDataBySettings(t, e) {
-    var a, r, n, o, s, m, c, i, d, g, l, v;
+    var a, r, n, o, i, m, c, d, s, v, l, p, y, u, C;
     const {
-      xColumn: p,
-      yColumn: D,
-      valueColumn: f,
-      xGroupBy: A,
-      yGroupBy: X,
-      facetBy: b,
-      annotations: S,
-      chartSettings: u,
-      facetSettings: G,
-      dendrogramX: Y,
-      dendrogramY: E,
-      normalization: _,
-      NAValueAs: k
-    } = e, w = Object.values(((a = t.dendrogramX) == null ? void 0 : a.aes) || {}).filter(
-      x
-    ), N = Object.values((Y == null ? void 0 : Y.aes) || {}).filter(x), T = Object.values(((r = t.dendrogramY) == null ? void 0 : r.aes) || {}).filter(
-      x
-    ), U = Object.values((E == null ? void 0 : E.aes) || {}).filter(x);
-    function y(C, O) {
-      return C.length !== O.length || C.some((V, j) => V.value !== O[j].value);
+      xColumn: S,
+      yColumn: b,
+      valueColumn: G,
+      xGroupBy: _,
+      yGroupBy: h,
+      facetBy: w,
+      annotations: N,
+      chartSettings: T,
+      facetSettings: Y,
+      dendrogramX: E,
+      dendrogramY: O,
+      normalization: B,
+      aggregation: D,
+      NAValueAs: j
+    } = e, U = Object.values(((a = t.dendrogramX) == null ? void 0 : a.aes) || {}).filter(
+      A
+    ), V = Object.values((E == null ? void 0 : E.aes) || {}).filter(A), H = Object.values(((r = t.dendrogramY) == null ? void 0 : r.aes) || {}).filter(
+      A
+    ), z = Object.values((O == null ? void 0 : O.aes) || {}).filter(A);
+    function f(x, R) {
+      return x.length !== R.length || x.some((I, q) => I.value !== R[q].value);
     }
-    return t.xColumn.value !== p.value || t.yColumn.value !== D.value || t.valueColumn.value !== f.value || y(t.xGroupBy, A) || y(t.yGroupBy, X) || y(t.facetBy, b) || y(
-      t.annotations.map((C) => C.valueColumn),
-      S.map((C) => C.valueColumn)
-    ) || y(w, N) || y(T, U) || (e.dendrogramX || t.dendrogramX) && (((n = t.dendrogramX) == null ? void 0 : n.distance) !== ((o = e.dendrogramX) == null ? void 0 : o.distance) || ((s = t.dendrogramX) == null ? void 0 : s.linkage) !== ((m = e.dendrogramX) == null ? void 0 : m.linkage)) || (e.dendrogramY || t.dendrogramY) && (((c = t.dendrogramY) == null ? void 0 : c.distance) !== ((i = e.dendrogramY) == null ? void 0 : i.distance) || ((d = t.dendrogramY) == null ? void 0 : d.linkage) !== ((g = e.dendrogramY) == null ? void 0 : g.linkage)) || t.chartSettings.valueType !== u.valueType || t.facetSettings.sharedX !== G.sharedX || t.facetSettings.sharedY !== G.sharedY || ((l = t.normalization) == null ? void 0 : l.method) !== (_ == null ? void 0 : _.method) || ((v = t.normalization) == null ? void 0 : v.direction) !== (_ == null ? void 0 : _.direction) || t.NAValueAs !== k;
+    return t.xColumn.value !== S.value || t.yColumn.value !== b.value || t.valueColumn.value !== G.value || f(t.xGroupBy, _) || f(t.yGroupBy, h) || f(t.facetBy, w) || f(
+      t.annotations.map((x) => x.valueColumn),
+      N.map((x) => x.valueColumn)
+    ) || f(U, V) || f(H, z) || (e.dendrogramX || t.dendrogramX) && (((n = t.dendrogramX) == null ? void 0 : n.distance) !== ((o = e.dendrogramX) == null ? void 0 : o.distance) || ((i = t.dendrogramX) == null ? void 0 : i.linkage) !== ((m = e.dendrogramX) == null ? void 0 : m.linkage)) || (e.dendrogramY || t.dendrogramY) && (((c = t.dendrogramY) == null ? void 0 : c.distance) !== ((d = e.dendrogramY) == null ? void 0 : d.distance) || ((s = t.dendrogramY) == null ? void 0 : s.linkage) !== ((v = e.dendrogramY) == null ? void 0 : v.linkage)) || t.chartSettings.valueType !== T.valueType || t.facetSettings.sharedX !== Y.sharedX || t.facetSettings.sharedY !== Y.sharedY || ((l = t.normalization) == null ? void 0 : l.method) !== (B == null ? void 0 : B.method) || ((p = t.normalization) == null ? void 0 : p.direction) !== (B == null ? void 0 : B.direction) || t.NAValueAs !== j || ((y = t.aggregation) == null ? void 0 : y.method) !== (D == null ? void 0 : D.method) || ((u = t.aggregation) == null ? void 0 : u.x) !== (D == null ? void 0 : D.x) || ((C = t.aggregation) == null ? void 0 : C.y) !== (D == null ? void 0 : D.y);
   }
   _needUpdateCalculatedDataByData(t, e) {
     const a = Object.keys(t.data), r = Object.keys(e.data);
@@ -80,15 +81,16 @@ class at extends H {
       xGroupBy: r,
       yGroupBy: n,
       facetBy: o,
-      chartSettings: s,
+      chartSettings: i,
       facetSettings: m,
       annotations: c,
-      dendrogramX: i,
-      dendrogramY: d,
-      normalization: g,
+      dendrogramX: d,
+      dendrogramY: s,
+      normalization: v,
       NAValueAs: l,
-      keysOrder: v
-    } = this.settings, p = I(
+      keysOrder: p,
+      aggregation: y
+    } = this.settings, u = K(
       this.data,
       t,
       e,
@@ -97,18 +99,19 @@ class at extends H {
       r,
       n,
       c,
-      i,
       d,
-      g,
-      l,
+      s,
       v,
-      s.xAxis,
-      s.yAxis
-    ), D = M(p, i, d, m), f = s.valueType === "discrete" ? this.data.getColumnCategories(a.value) : [];
+      l,
+      p,
+      i.xAxis,
+      i.yAxis,
+      y
+    ), C = M(u, d, s, m), S = i.valueType === "discrete" ? this.data.getColumnCategories(a.value) : [];
     this.calculatedData = {
-      groupedCellsData: p,
-      dendrogramsData: D,
-      cellUniqValues: f
+      groupedCellsData: u,
+      dendrogramsData: C,
+      cellUniqValues: S
     };
   }
   _updateAesInData() {
@@ -122,51 +125,51 @@ class at extends H {
       valueColumn: r,
       chartSettings: n,
       facetSettings: o,
-      aes: s,
+      aes: i,
       annotations: m,
       dendrogramX: c,
-      dendrogramY: i,
-      inheritedDendrogramAes: d,
-      normalization: g,
+      dendrogramY: d,
+      inheritedDendrogramAes: s,
+      normalization: v,
       keysOrder: l,
-      xColumn: v,
-      yColumn: p,
-      xGroupBy: D,
-      yGroupBy: f
-    } = this.settings, A = {
-      x: ((t = l[v.value]) == null ? void 0 : t.length) > 0,
-      y: ((e = l[p.value]) == null ? void 0 : e.length) > 0,
-      xGroup: D.some((S) => {
-        var u;
-        return ((u = l[S.value]) == null ? void 0 : u.length) > 0;
+      xColumn: p,
+      yColumn: y,
+      xGroupBy: u,
+      yGroupBy: C
+    } = this.settings, S = {
+      x: ((t = l[p.value]) == null ? void 0 : t.length) > 0,
+      y: ((e = l[y.value]) == null ? void 0 : e.length) > 0,
+      xGroup: u.some((_) => {
+        var h;
+        return ((h = l[_.value]) == null ? void 0 : h.length) > 0;
       }),
-      yGroup: f.some((S) => {
-        var u;
-        return ((u = l[S.value]) == null ? void 0 : u.length) > 0;
+      yGroup: C.some((_) => {
+        var h;
+        return ((h = l[_.value]) == null ? void 0 : h.length) > 0;
       })
-    }, X = this.data.columnNames.length ? this.data.getColumn(this.data.columnNames[0]).length : 0, b = this.settings.cellsRenderingMode ?? (X > L ? "canvas" : "svg");
+    }, b = this.data.columnNames.length ? this.data.getColumn(this.data.columnNames[0]).length : 0, G = this.settings.cellsRenderingMode ?? (b > P ? "canvas" : "svg");
     this.chartRenderer.render(
       this.data,
       a,
       n,
       o,
-      s,
+      i,
       this.calculatedData.groupedCellsData,
       m,
       r,
       c,
-      i,
-      this.calculatedData.dendrogramsData,
       d,
+      this.calculatedData.dendrogramsData,
+      s,
       this.calculatedData.cellUniqValues,
-      g,
+      v,
       this.onTooltipHintSwitch,
-      A,
-      b
+      S,
+      G
     );
   }
 }
 export {
-  at as ChartHeatmap
+  lt as ChartHeatmap
 };
 //# sourceMappingURL=index.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sources":["../../../../../../node_modules/@milaboratories/miplots4/src/heatmap/index.ts"],"sourcesContent":["import { renderToString } from 'react-dom/server';\nimport { AbstractChart } from '../AbstractChart';\nimport type { DataFrame } from '../DataFrame';\nimport type { ColumnName, DataValue, HeatmapEventHandlers, HeatmapSettings } from '../types';\nimport { isColumnName } from '../utils';\nimport ChartRenderer from './ChartRenderer';\nimport type { GroupedCellsData } from './getCells';\nimport { getCells } from './getCells';\nimport type { DendrogramsData } from './getDendrograms';\nimport { getDendrograms } from './getDendrograms';\nimport { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { MAX_SVG_RENDERED_CELLS_COUNT } from './constants';\n\nexport class ChartHeatmap extends AbstractChart {\n    settings: HeatmapSettingsImpl;\n    chartRenderer = new ChartRenderer();\n\n    onTooltipHintSwitch: (v:boolean) => void = () => undefined;\n    calculatedData: {\n        groupedCellsData: GroupedCellsData;\n        dendrogramsData: DendrogramsData;\n        cellUniqValues: DataValue[];\n    } | null = null;\n\n    constructor(data: DataFrame, settings: HeatmapSettings, eventHandlers?:HeatmapEventHandlers) {\n        super(data, settings);\n\n        this.settings = new HeatmapSettingsImpl(settings);\n        if (eventHandlers) {\n            this.onTooltipHintSwitch = eventHandlers[0];\n        }\n    }\n\n    mount(node: HTMLElement) {\n        try {\n            this.chartRenderer.init(node);\n            this._updateData();\n            this._updateChart();\n            this.hasError = false;\n        } catch (err) {\n            this.hasError = true;\n            if (err instanceof Error) {\n                this.chartRenderer.renderError(err.message as string);\n                console.error(err);\n            }\n        }\n    }\n\n    unmount() {\n        this.chartRenderer.clear();\n    }\n\n    updateSettingsAndData(data: DataFrame, settings: HeatmapSettings) {\n        try {\n            const previousSettings = this.settings;\n            const previousData = this.data;\n            this.settings = new HeatmapSettingsImpl(settings);\n            this.data = data;\n            if (\n                this._needUpdateCalculatedDataBySettings(previousSettings, this.settings) ||\n                this._needUpdateCalculatedDataByData(previousData, this.data)\n            ) {\n                this._updateData();\n            } else {\n                this._updateAesInData();\n            }\n            this._updateChart();\n        } catch (err) {\n            if (err instanceof Error) {\n                this.chartRenderer.renderError(err.message as string);\n                console.error(err);\n            }\n        }\n    }\n\n    updateChartState(_field: string, _value: unknown) {\n        console.warn('no chart state for heatmap');\n    }\n\n    export(): string {\n        this._updateChart();\n        return renderToString(this.chartRenderer.component);\n    }\n\n    _needUpdateCalculatedDataBySettings(prevSettings: HeatmapSettingsImpl, settings: HeatmapSettingsImpl) {\n        const {\n            xColumn,\n            yColumn,\n            valueColumn,\n            xGroupBy,\n            yGroupBy,\n            facetBy,\n            annotations,\n            chartSettings,\n            facetSettings,\n            dendrogramX,\n            dendrogramY,\n            normalization,\n            NAValueAs,\n        } = settings;\n\n        const prevDendrogramXColumns: ColumnName[] = Object.values(prevSettings.dendrogramX?.aes || {}).filter(\n            isColumnName\n        );\n        const currentDendrogramXColumns: ColumnName[] = Object.values(dendrogramX?.aes || {}).filter(isColumnName);\n        const prevDendrogramYColumns: ColumnName[] = Object.values(prevSettings.dendrogramY?.aes || {}).filter(\n            isColumnName\n        );\n        const currentDendrogramYColumns: ColumnName[] = Object.values(dendrogramY?.aes || {}).filter(isColumnName);\n\n        function compareColumnGroups(columns1: ColumnName[], columns2: ColumnName[]) {\n            return (\n                columns1.length !== columns2.length ||\n                columns1.some((column, idx) => column.value !== columns2[idx].value)\n            );\n        }\n\n        return (\n            prevSettings.xColumn.value !== xColumn.value ||\n            prevSettings.yColumn.value !== yColumn.value ||\n            prevSettings.valueColumn.value !== valueColumn.value ||\n            compareColumnGroups(prevSettings.xGroupBy, xGroupBy) ||\n            compareColumnGroups(prevSettings.yGroupBy, yGroupBy) ||\n            compareColumnGroups(prevSettings.facetBy, facetBy) ||\n            compareColumnGroups(\n                prevSettings.annotations.map(a => a.valueColumn),\n                annotations.map(a => a.valueColumn)\n            ) ||\n            compareColumnGroups(prevDendrogramXColumns, currentDendrogramXColumns) ||\n            compareColumnGroups(prevDendrogramYColumns, currentDendrogramYColumns) ||\n            ((settings.dendrogramX || prevSettings.dendrogramX) &&\n                (prevSettings.dendrogramX?.distance !== settings.dendrogramX?.distance ||\n                    prevSettings.dendrogramX?.linkage !== settings.dendrogramX?.linkage)) ||\n            ((settings.dendrogramY || prevSettings.dendrogramY) &&\n                (prevSettings.dendrogramY?.distance !== settings.dendrogramY?.distance ||\n                    prevSettings.dendrogramY?.linkage !== settings.dendrogramY?.linkage)) ||\n            prevSettings.chartSettings.valueType !== chartSettings.valueType ||\n            prevSettings.facetSettings.sharedX !== facetSettings.sharedX ||\n            prevSettings.facetSettings.sharedY !== facetSettings.sharedY ||\n            prevSettings.normalization?.method !== normalization?.method ||\n            prevSettings.normalization?.direction !== normalization?.direction ||\n                prevSettings.NAValueAs !== NAValueAs\n        );\n    }\n\n    _needUpdateCalculatedDataByData(prevData: DataFrame, data: DataFrame) {\n        const prevKeys = Object.keys(prevData.data);\n        const keys = Object.keys(data.data);\n        return (\n            prevData.id !== data.id ||\n            prevKeys.length !== keys.length ||\n            prevKeys.some(key => prevData.data[key].length !== data.data[key]?.length)\n        );\n    }\n\n    _updateData() {\n        const {\n            xColumn,\n            yColumn,\n            valueColumn,\n            xGroupBy,\n            yGroupBy,\n            facetBy,\n            chartSettings,\n            facetSettings,\n            annotations,\n            dendrogramX,\n            dendrogramY,\n            normalization,\n            NAValueAs,\n            keysOrder\n        } = this.settings;\n\n        const groupedCellsData = getCells(\n            this.data,\n            xColumn,\n            yColumn,\n            valueColumn,\n            facetBy,\n            xGroupBy,\n            yGroupBy,\n            annotations,\n            dendrogramX,\n            dendrogramY,\n            normalization,\n            NAValueAs,\n            keysOrder,\n            chartSettings.xAxis,\n            chartSettings.yAxis,\n        );\n        const dendrogramsData = getDendrograms(groupedCellsData, dendrogramX, dendrogramY, facetSettings);\n        const cellUniqValues =\n            chartSettings.valueType === 'discrete' ? this.data.getColumnCategories(valueColumn.value) : [];\n\n        this.calculatedData = {\n            groupedCellsData,\n            dendrogramsData,\n            cellUniqValues,\n        };\n    }\n\n    _updateAesInData() {\n        return;\n    }\n\n    _updateChart() {\n        if (!this.calculatedData) {\n            return;\n        }\n        const {\n            id,\n            valueColumn,\n            chartSettings,\n            facetSettings,\n            aes,\n            annotations,\n            dendrogramX,\n            dendrogramY,\n            inheritedDendrogramAes,\n            normalization,\n            keysOrder,\n            xColumn,\n            yColumn,\n            xGroupBy,\n            yGroupBy,\n        } = this.settings;\n        const customOrder = {\n            x: keysOrder[xColumn.value]?.length > 0,\n            y: keysOrder[yColumn.value]?.length > 0,\n            xGroup: xGroupBy.some((v) => keysOrder[v.value]?.length > 0),\n            yGroup: yGroupBy.some((v) => keysOrder[v.value]?.length > 0),\n        };\n        const dataSize = this.data.columnNames.length ? this.data.getColumn(this.data.columnNames[0]).length : 0;\n        const cellsRenderingMode = this.settings.cellsRenderingMode ?? (dataSize > MAX_SVG_RENDERED_CELLS_COUNT ? 'canvas' : 'svg');\n        \n        this.chartRenderer.render(\n            this.data,\n            id,\n            chartSettings,\n            facetSettings,\n            aes,\n            this.calculatedData.groupedCellsData,\n            annotations,\n            valueColumn,\n            dendrogramX,\n            dendrogramY,\n            this.calculatedData.dendrogramsData,\n            inheritedDendrogramAes,\n            this.calculatedData.cellUniqValues,\n            normalization,\n            this.onTooltipHintSwitch,\n            customOrder,\n            cellsRenderingMode\n        );\n    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+{"version":3,"file":"index.js","sources":["../../../../../../node_modules/@milaboratories/miplots4/src/heatmap/index.ts"],"sourcesContent":["import { renderToString } from 'react-dom/server';\nimport { AbstractChart } from '../AbstractChart';\nimport type { DataFrame } from '../DataFrame';\nimport type { ColumnName, DataValue, HeatmapEventHandlers, HeatmapSettings } from '../types';\nimport { isColumnName } from '../utils';\nimport ChartRenderer from './ChartRenderer';\nimport type { GroupedCellsData } from './getCells';\nimport { getCells } from './getCells';\nimport type { DendrogramsData } from './getDendrograms';\nimport { getDendrograms } from './getDendrograms';\nimport { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { MAX_SVG_RENDERED_CELLS_COUNT } from './constants';\n\nexport class ChartHeatmap extends AbstractChart {\n    settings: HeatmapSettingsImpl;\n    chartRenderer = new ChartRenderer();\n\n    onTooltipHintSwitch: (v:boolean) => void = () => undefined;\n    calculatedData: {\n        groupedCellsData: GroupedCellsData;\n        dendrogramsData: DendrogramsData;\n        cellUniqValues: DataValue[];\n    } | null = null;\n\n    constructor(data: DataFrame, settings: HeatmapSettings, eventHandlers?:HeatmapEventHandlers) {\n        super(data, settings);\n\n        this.settings = new HeatmapSettingsImpl(settings);\n        if (eventHandlers) {\n            this.onTooltipHintSwitch = eventHandlers[0];\n        }\n    }\n\n    mount(node: HTMLElement) {\n        try {\n            this.chartRenderer.init(node);\n            this._updateData();\n            this._updateChart();\n            this.hasError = false;\n        } catch (err) {\n            this.hasError = true;\n            if (err instanceof Error) {\n                this.chartRenderer.renderError(err.message as string);\n                console.error(err);\n            }\n        }\n    }\n\n    unmount() {\n        this.chartRenderer.clear();\n    }\n\n    updateSettingsAndData(data: DataFrame, settings: HeatmapSettings) {\n        try {\n            const previousSettings = this.settings;\n            const previousData = this.data;\n            this.settings = new HeatmapSettingsImpl(settings);\n            this.data = data;\n            if (\n                this._needUpdateCalculatedDataBySettings(previousSettings, this.settings) ||\n                this._needUpdateCalculatedDataByData(previousData, this.data)\n            ) {\n                this._updateData();\n            } else {\n                this._updateAesInData();\n            }\n            this._updateChart();\n        } catch (err) {\n            if (err instanceof Error) {\n                this.chartRenderer.renderError(err.message as string);\n                console.error(err);\n            }\n        }\n    }\n\n    updateChartState(_field: string, _value: unknown) {\n        console.warn('no chart state for heatmap');\n    }\n\n    export(): string {\n        this._updateChart();\n        return renderToString(this.chartRenderer.component);\n    }\n\n    _needUpdateCalculatedDataBySettings(prevSettings: HeatmapSettingsImpl, settings: HeatmapSettingsImpl) {\n        const {\n            xColumn,\n            yColumn,\n            valueColumn,\n            xGroupBy,\n            yGroupBy,\n            facetBy,\n            annotations,\n            chartSettings,\n            facetSettings,\n            dendrogramX,\n            dendrogramY,\n            normalization,\n            aggregation,\n            NAValueAs,\n        } = settings;\n\n        const prevDendrogramXColumns: ColumnName[] = Object.values(prevSettings.dendrogramX?.aes || {}).filter(\n            isColumnName\n        );\n        const currentDendrogramXColumns: ColumnName[] = Object.values(dendrogramX?.aes || {}).filter(isColumnName);\n        const prevDendrogramYColumns: ColumnName[] = Object.values(prevSettings.dendrogramY?.aes || {}).filter(\n            isColumnName\n        );\n        const currentDendrogramYColumns: ColumnName[] = Object.values(dendrogramY?.aes || {}).filter(isColumnName);\n\n        function compareColumnGroups(columns1: ColumnName[], columns2: ColumnName[]) {\n            return (\n                columns1.length !== columns2.length ||\n                columns1.some((column, idx) => column.value !== columns2[idx].value)\n            );\n        }\n\n        return (\n            prevSettings.xColumn.value !== xColumn.value ||\n            prevSettings.yColumn.value !== yColumn.value ||\n            prevSettings.valueColumn.value !== valueColumn.value ||\n            compareColumnGroups(prevSettings.xGroupBy, xGroupBy) ||\n            compareColumnGroups(prevSettings.yGroupBy, yGroupBy) ||\n            compareColumnGroups(prevSettings.facetBy, facetBy) ||\n            compareColumnGroups(\n                prevSettings.annotations.map(a => a.valueColumn),\n                annotations.map(a => a.valueColumn)\n            ) ||\n            compareColumnGroups(prevDendrogramXColumns, currentDendrogramXColumns) ||\n            compareColumnGroups(prevDendrogramYColumns, currentDendrogramYColumns) ||\n            ((settings.dendrogramX || prevSettings.dendrogramX) &&\n                (prevSettings.dendrogramX?.distance !== settings.dendrogramX?.distance ||\n                    prevSettings.dendrogramX?.linkage !== settings.dendrogramX?.linkage)) ||\n            ((settings.dendrogramY || prevSettings.dendrogramY) &&\n                (prevSettings.dendrogramY?.distance !== settings.dendrogramY?.distance ||\n                    prevSettings.dendrogramY?.linkage !== settings.dendrogramY?.linkage)) ||\n            prevSettings.chartSettings.valueType !== chartSettings.valueType ||\n            prevSettings.facetSettings.sharedX !== facetSettings.sharedX ||\n            prevSettings.facetSettings.sharedY !== facetSettings.sharedY ||\n            prevSettings.normalization?.method !== normalization?.method ||\n            prevSettings.normalization?.direction !== normalization?.direction ||\n            prevSettings.NAValueAs !== NAValueAs ||\n            prevSettings.aggregation?.method !== aggregation?.method ||\n            prevSettings.aggregation?.x !== aggregation?.x ||\n            prevSettings.aggregation?.y !== aggregation?.y\n        );\n    }\n\n    _needUpdateCalculatedDataByData(prevData: DataFrame, data: DataFrame) {\n        const prevKeys = Object.keys(prevData.data);\n        const keys = Object.keys(data.data);\n        return (\n            prevData.id !== data.id ||\n            prevKeys.length !== keys.length ||\n            prevKeys.some(key => prevData.data[key].length !== data.data[key]?.length)\n        );\n    }\n\n    _updateData() {\n        const {\n            xColumn,\n            yColumn,\n            valueColumn,\n            xGroupBy,\n            yGroupBy,\n            facetBy,\n            chartSettings,\n            facetSettings,\n            annotations,\n            dendrogramX,\n            dendrogramY,\n            normalization,\n            NAValueAs,\n            keysOrder,\n            aggregation\n        } = this.settings;\n\n        const groupedCellsData = getCells(\n            this.data,\n            xColumn,\n            yColumn,\n            valueColumn,\n            facetBy,\n            xGroupBy,\n            yGroupBy,\n            annotations,\n            dendrogramX,\n            dendrogramY,\n            normalization,\n            NAValueAs,\n            keysOrder,\n            chartSettings.xAxis,\n            chartSettings.yAxis,\n            aggregation\n        );\n        const dendrogramsData = getDendrograms(groupedCellsData, dendrogramX, dendrogramY, facetSettings);\n        const cellUniqValues =\n            chartSettings.valueType === 'discrete' ? this.data.getColumnCategories(valueColumn.value) : [];\n\n        this.calculatedData = {\n            groupedCellsData,\n            dendrogramsData,\n            cellUniqValues,\n        };\n    }\n\n    _updateAesInData() {\n        return;\n    }\n\n    _updateChart() {\n        if (!this.calculatedData) {\n            return;\n        }\n        const {\n            id,\n            valueColumn,\n            chartSettings,\n            facetSettings,\n            aes,\n            annotations,\n            dendrogramX,\n            dendrogramY,\n            inheritedDendrogramAes,\n            normalization,\n            keysOrder,\n            xColumn,\n            yColumn,\n            xGroupBy,\n            yGroupBy,\n        } = this.settings;\n        const customOrder = {\n            x: keysOrder[xColumn.value]?.length > 0,\n            y: keysOrder[yColumn.value]?.length > 0,\n            xGroup: xGroupBy.some((v) => keysOrder[v.value]?.length > 0),\n            yGroup: yGroupBy.some((v) => keysOrder[v.value]?.length > 0),\n        };\n        const dataSize = this.data.columnNames.length ? 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package/dist/node_modules/@milaboratories/miplots4/dist/node_modules/react/index.js

@@ -1,4 +1,4 @@
-import { __module as r } from "../../_virtual/index3.js";
+import { __module as r } from "../../_virtual/index2.js";
 import { __require as o } from "./cjs/react.production.min.js";
 import { __require as t } from "./cjs/react.development.js";
 var e;

package/dist/node_modules/@milaboratories/miplots4/dist/node_modules/react-dom/index.js

@@ -1,4 +1,4 @@
-import { __module as _ } from "../../_virtual/index2.js";
+import { __module as _ } from "../../_virtual/index3.js";
 import { __require as e } from "./cjs/react-dom.production.min.js";
 import { __require as O } from "./cjs/react-dom.development.js";
 function r() {

package/dist/node_modules/@milaboratories/miplots4/dist/types/discrete.js

@@ -1,5 +1,5 @@
 import o from "../node_modules/zod/lib/index.js";
-import { LineShapeSchema as t, PointShapeSchema as e, ColumnNameSchema as i, DataValueSchema as a, AxisSettingsContinuousSchema as s, AxisSettingsDiscreteSchema as b, TitlePositionSchema as l, AesRecordSchema as p, FrameTypeSchema as m, LegendPositionSchema as u } from "./common.js";
+import { LineShapeSchema as t, PointShapeSchema as e, ColumnNameSchema as i, DataValueSchema as a, AxisSettingsContinuousSchema as m, AxisSettingsDiscreteSchema as s, TitlePositionSchema as l, AesRecordSchema as p, FrameTypeSchema as b, LegendPositionSchema as u } from "./common.js";
 const n = o.object({ type: o.enum(["primaryGrouping", "secondaryGrouping"]) }), c = o.object({
   type: o.literal("box"),
   stat: o.optional(
@@ -61,6 +61,7 @@ const n = o.object({ type: o.enum(["primaryGrouping", "secondaryGrouping"]) }),
 }), j = ["mean", "median"], y = ["sd", "se", "ci"], r = o.enum(j), g = o.enum(y), S = o.object({
   type: o.literal("line"),
   pointsValues: r,
+  emptyGroupValue: o.optional(o.number()),
   aes: o.optional(
     o.object({
       showOutliers: o.optional(o.boolean()),
@@ -180,17 +181,17 @@ const n = o.object({ type: o.enum(["primaryGrouping", "secondaryGrouping"]) }),
       areaOpacity: o.optional(o.number().min(0).max(1))
     })
   )
-}), A = ["ttest", "anova", "wilcoxon", "kruskalWallis"], B = [
+}), G = ["ttest", "anova", "wilcoxon", "kruskalWallis"], A = [
   "BenjaminiHochberg",
   "BenjaminiYekutieli",
   "Bonferroni",
   "Hochberg",
   "Holm",
   "Hommel"
-], G = o.enum(A), v = o.enum(B), D = o.object({ one: o.number(), two: o.number(), three: o.number() }), L = o.object({
+], B = o.enum(G), v = o.enum(A), D = o.object({ one: o.number(), two: o.number(), three: o.number() }), L = o.object({
   type: o.literal("stat"),
   statType: o.enum(["overall", "referenceGroup", "pairwise"]),
-  testMethod: G,
+  testMethod: B,
   paired: o.optional(o.boolean()),
   ns: o.optional(o.boolean()),
   format: o.optional(o.enum(["significance", "pValue"])),
@@ -211,7 +212,7 @@ const n = o.object({ type: o.enum(["primaryGrouping", "secondaryGrouping"]) }),
   k,
   O,
   L
-]), N = ["horizontal", "vertical"], $ = o.enum(N), V = o.object({
+]), N = ["horizontal", "vertical"], V = o.enum(N), T = o.object({
   type: o.literal("discrete"),
   title: o.object({
     name: o.string(),
@@ -247,8 +248,8 @@ const n = o.object({ type: o.enum(["primaryGrouping", "secondaryGrouping"]) }),
       logo: o.optional(o.object({ show: o.boolean() }))
     })
   ),
-  frame: o.optional(o.object({ type: o.optional(m) })),
-  orientation: o.optional($),
+  frame: o.optional(o.object({ type: o.optional(b) })),
+  orientation: o.optional(V),
   keyColumn: o.optional(i),
   primaryGrouping: o.optional(
     o.object({
@@ -277,11 +278,11 @@ const n = o.object({ type: o.enum(["primaryGrouping", "secondaryGrouping"]) }),
       titlePosition: o.optional(l)
     })
   ),
-  xAxis: o.optional(b),
-  yAxis: o.optional(s),
+  xAxis: o.optional(s),
+  yAxis: o.optional(m),
   layers: o.array(P)
 });
 export {
-  V as DiscreteSettingsSchema
+  T as DiscreteSettingsSchema
 };
 //# sourceMappingURL=discrete.js.map