@milaboratories/graph-maker 1.1.144 → 1.1.145

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Files changed (5) hide show
  1. package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/getCells.js +64 -64
  2. package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/getCells.js.map +1 -1
  3. package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/utils/calculateCaptionTails.js +31 -31
  4. package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/utils/calculateCaptionTails.js.map +1 -1
  5. package/package.json +2 -2
package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/getCells.js CHANGED
@@ -3,36 +3,36 @@ import X from "../node_modules/d3-array/src/deviation.js";
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  import _ from "../node_modules/d3-array/src/mean.js";
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  import Y from "../node_modules/d3-array/src/extent.js";
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  const Z = 5e5;
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- function I(t) {
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- const n = X(t), y = _(t);
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- return n === void 0 || y === void 0 || n === 0 ? (c) => c : (c) => (c - y) / n;
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+ function I(l) {
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+ const n = X(l), y = _(l);
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+ return n === void 0 || y === void 0 || n === 0 ? (f) => f : (f) => (f - y) / n;
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  }
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- function J(t) {
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- const n = _(t), [y, c] = Y(t);
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- return n === void 0 || y === void 0 || c === void 0 || c === y ? (f) => f : (f) => (f - n) / (c - y);
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+ function J(l) {
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+ const n = _(l), [y, f] = Y(l);
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+ return n === void 0 || y === void 0 || f === void 0 || f === y ? (i) => i : (i) => (i - n) / (f - y);
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  }
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- function P(t, n) {
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- return t === "standardScaling" ? I(n) : t === "meanNormalization" ? J(n) : (y) => y;
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+ function P(l, n) {
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+ return l === "standardScaling" ? I(n) : l === "meanNormalization" ? J(n) : (y) => y;
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  }
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- function b(t) {
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- if (!t.length)
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+ function b(l) {
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+ if (!l.length)
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  return [];
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  let n = [[]];
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- return t.forEach((y) => {
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- const c = [];
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- y.forEach((f) => {
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- c.push(...n.map((h) => [...h, f]));
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- }), n = c;
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+ return l.forEach((y) => {
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+ const f = [];
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+ y.forEach((i) => {
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+ f.push(...n.map((x) => [...x, i]));
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+ }), n = f;
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  }), n;
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  }
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- function ue(t, n, y, c, f, h, g, L, z, N, B, O) {
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- const D = t.columnNames.length ? t.getColumn(t.columnNames[0]).length : 0;
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+ function ue(l, n, y, f, i, x, B, L, z, N, E, O) {
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+ const D = l.columnNames.length ? l.getColumn(l.columnNames[0]).length : 0;
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  D > Z && console.error(`Too many cells for graph rendering (${D})`);
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- const T = f.length ? f.map((e) => t.getColumnCategories(e.value)) : [["null"]], k = h.length ? h.map((e) => t.getColumnCategories(e.value)) : [["null"]], A = g.length ? g.map((e) => t.getColumnCategories(e.value)) : [["null"]], $ = b(T), j = b(k), w = b(A), M = $.map((e) => e.join("_")), E = j.map((e) => e.join("_")), G = w.map((e) => e.join("_")), a = {
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+ const T = i.length ? i.map((e) => l.getColumnCategories(e.value)) : [["null"]], k = x.length ? x.map((e) => l.getColumnCategories(e.value)) : [["null"]], A = B.length ? B.map((e) => l.getColumnCategories(e.value)) : [["null"]], $ = b(T), j = b(k), w = b(A), M = $.map((e) => e.join("_")), G = j.map((e) => e.join("_")), d = w.map((e) => e.join("_")), a = {
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  meta: {
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  facetKeys: M,
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- xGroupKeys: E,
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- yGroupKeys: G,
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+ xGroupKeys: G,
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+ yGroupKeys: d,
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  xKeysByGroups: {},
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  yKeysByGroups: {},
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  xLabels: {},
@@ -41,93 +41,93 @@ function ue(t, n, y, c, f, h, g, L, z, N, B, O) {
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  yGroupLabels: {},
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  xDataByKeys: {},
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  yDataByKeys: {},
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- facetKeyValues: M.reduce((e, l, o) => (e[l] = $[o], e), {}),
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- xGroupKeyValues: E.reduce((e, l, o) => (e[l] = j[o], e), {}),
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- yGroupKeyValues: G.reduce((e, l, o) => (e[l] = w[o], e), {}),
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+ facetKeyValues: M.reduce((e, t, o) => (e[t] = $[o], e), {}),
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+ xGroupKeyValues: G.reduce((e, t, o) => (e[t] = j[o], e), {}),
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+ yGroupKeyValues: d.reduce((e, t, o) => (e[t] = w[o], e), {}),
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  valueExtent: [1 / 0, -1 / 0]
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  },
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  facets: {}
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  }, q = n.valueLabels ?? n.value, S = y.valueLabels ?? y.value, F = L.filter((e) => e.axis === "x").map((e) => e.valueColumn.value), H = L.filter((e) => e.axis === "y").map((e) => e.valueColumn.value), Q = Object.values(z ?? {}).map((e) => e.value), R = Object.values(N ?? {}).map((e) => e.value), U = v.uniq([...F, ...Q, q]), W = v.uniq([...H, ...R, S]);
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- for (let e = 0; e < t.rowsCount; e++) {
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- const l = f.length ? f.map((u) => t.getColumnValue(u.value, e)).join("_") : "null", o = h.length ? h.map((u) => t.getColumnValue(u.value, e)).join("_") : "null", d = g.length ? g.map((u) => t.getColumnValue(u.value, e)).join("_") : "null", V = h.length ? h.map((u) => t.getColumnValue(u.valueLabels ?? u.value, e)).join(", ") : "", C = g.length ? g.map((u) => t.getColumnValue(u.valueLabels ?? u.value, e)).join(", ") : "";
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- a.meta.xGroupLabels[o] = V, a.meta.yGroupLabels[o] = C;
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- const s = String(t.getColumnValue(n.value, e)), r = String(t.getColumnValue(y.value, e)), i = t.getColumnValue(c.value, e) ?? O;
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- if (s === "null" || r === "null" || i === null)
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+ for (let e = 0; e < l.rowsCount; e++) {
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+ const t = i.length ? i.map((u) => l.getColumnValue(u.value, e)).join("_") : "null", o = x.length ? x.map((u) => l.getColumnValue(u.value, e)).join("_") : "null", g = B.length ? B.map((u) => l.getColumnValue(u.value, e)).join("_") : "null", V = x.length ? x.map((u) => l.getColumnValue(u.valueLabels ?? u.value, e)).join(", ") : "", C = B.length ? B.map((u) => l.getColumnValue(u.valueLabels ?? u.value, e)).join(", ") : "";
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+ a.meta.xGroupLabels[o] = V, a.meta.yGroupLabels[g] = C;
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+ const s = String(l.getColumnValue(n.value, e)), r = String(l.getColumnValue(y.value, e)), m = l.getColumnValue(f.value, e) ?? O;
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+ if (s === "null" || r === "null" || m === null)
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  continue;
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- if (a.facets[l] || (a.facets[l] = {
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+ if (a.facets[t] || (a.facets[t] = {
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  xKeys: [],
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  yKeys: [],
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  xKeysByGroups: {},
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  yKeysByGroups: {},
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  cells: {}
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- }), a.facets[l].xKeysByGroups[o] || (a.facets[l].xKeysByGroups[o] = []), a.facets[l].yKeysByGroups[d] || (a.facets[l].yKeysByGroups[d] = []), a.facets[l].xKeys.push(s), a.facets[l].yKeys.push(r), a.facets[l].xKeysByGroups[o].push(s), a.facets[l].yKeysByGroups[d].push(r), a.facets[l].cells[s] || (a.facets[l].cells[s] = {}), a.meta.valueExtent[0] = Math.min(i, a.meta.valueExtent[0]), a.meta.valueExtent[1] = Math.max(i, a.meta.valueExtent[1]), a.facets[l].cells[s][r])
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+ }), a.facets[t].xKeysByGroups[o] || (a.facets[t].xKeysByGroups[o] = []), a.facets[t].yKeysByGroups[g] || (a.facets[t].yKeysByGroups[g] = []), a.facets[t].xKeys.push(s), a.facets[t].yKeys.push(r), a.facets[t].xKeysByGroups[o].push(s), a.facets[t].yKeysByGroups[g].push(r), a.facets[t].cells[s] || (a.facets[t].cells[s] = {}), a.meta.valueExtent[0] = Math.min(m, a.meta.valueExtent[0]), a.meta.valueExtent[1] = Math.max(m, a.meta.valueExtent[1]), a.facets[t].cells[s][r] && a.facets[t].cells[s][r].value !== m)
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  throw Error(`More than 1 value for x=${s}, y=${r}`);
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- const x = t.getColumnValue(q, e);
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- if (a.meta.xLabels[s] && String(x) !== a.meta.xLabels[s])
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+ const K = l.getColumnValue(q, e);
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+ if (a.meta.xLabels[s] && String(K) !== a.meta.xLabels[s])
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  throw Error(`More than 1 x-label value for x=${s}`);
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- const p = t.getColumnValue(S, e);
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+ const p = l.getColumnValue(S, e);
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  if (a.meta.yLabels[r] && String(p) !== a.meta.yLabels[r])
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  throw Error(`More than 1 y-label value for y=${r}`);
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- a.meta.xLabels[s] = String(x), a.meta.yLabels[r] = String(p), U.forEach((u) => {
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- const m = typeof a.meta.xDataByKeys[u] < "u", K = m && typeof a.meta.xDataByKeys[u][s] < "u";
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- if (m || (a.meta.xDataByKeys[u] = {}), K && a.meta.xDataByKeys[u][s] !== t.getColumnValue(u, e))
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+ a.meta.xLabels[s] = String(K), a.meta.yLabels[r] = String(p), U.forEach((u) => {
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+ const c = typeof a.meta.xDataByKeys[u] < "u", h = c && typeof a.meta.xDataByKeys[u][s] < "u";
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+ if (c || (a.meta.xDataByKeys[u] = {}), h && a.meta.xDataByKeys[u][s] !== l.getColumnValue(u, e))
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  throw Error(`More than 1 value for x = ${s} and column = ${u}`);
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- K || (a.meta.xDataByKeys[u][s] = t.getColumnValue(u, e));
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+ h || (a.meta.xDataByKeys[u][s] = l.getColumnValue(u, e));
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  }), W.forEach((u) => {
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- const m = typeof a.meta.yDataByKeys[u] < "u", K = m && typeof a.meta.yDataByKeys[u][r] < "u";
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- if (m || (a.meta.yDataByKeys[u] = {}), K && a.meta.yDataByKeys[u][r] !== t.getColumnValue(u, e))
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+ const c = typeof a.meta.yDataByKeys[u] < "u", h = c && typeof a.meta.yDataByKeys[u][r] < "u";
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+ if (c || (a.meta.yDataByKeys[u] = {}), h && a.meta.yDataByKeys[u][r] !== l.getColumnValue(u, e))
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  throw Error(`More than 1 value for y = ${r} and column = ${u}`);
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- K || (a.meta.yDataByKeys[u][r] = t.getColumnValue(u, e));
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- }), a.facets[l].cells[s][r] = {
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+ h || (a.meta.yDataByKeys[u][r] = l.getColumnValue(u, e));
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+ }), a.facets[t].cells[s][r] = {
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  isCell: !0,
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  idx: e,
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  id: `${s}_${r}`,
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  x: s,
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  y: r,
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- value: i,
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- normalizedValue: i
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+ value: m,
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+ normalizedValue: m
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  };
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  }
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  if (a.meta.facetKeys = a.meta.facetKeys.filter((e) => a.facets[e]), a.meta.facetKeys.forEach((e) => {
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- const l = a.facets[e];
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- l.xKeys = v.uniq(l.xKeys), l.yKeys = v.uniq(l.yKeys), E.forEach((o) => {
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+ const t = a.facets[e];
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+ t.xKeys = v.uniq(t.xKeys), t.yKeys = v.uniq(t.yKeys), G.forEach((o) => {
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  a.facets[e].xKeysByGroups[o] = v.uniq(
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  a.facets[e].xKeysByGroups[o]
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  );
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- }), G.forEach((o) => {
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+ }), d.forEach((o) => {
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  a.facets[e].yKeysByGroups[o] = v.uniq(
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  a.facets[e].yKeysByGroups[o]
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  );
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  });
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- }), B) {
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+ }), E) {
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  const e = [1 / 0, -1 / 0];
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- a.meta.facetKeys.forEach((l) => {
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- const { xKeys: o, yKeys: d, cells: V } = a.facets[l], C = B.direction === "row" ? o : d, s = B.direction === "row" ? d : o, r = B.direction === "row" ? (i, x) => {
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+ a.meta.facetKeys.forEach((t) => {
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+ const { xKeys: o, yKeys: g, cells: V } = a.facets[t], C = E.direction === "row" ? o : g, s = E.direction === "row" ? g : o, r = E.direction === "row" ? (m, K) => {
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  var p;
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- return (p = V[i]) == null ? void 0 : p[x];
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- } : (i, x) => {
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+ return (p = V[m]) == null ? void 0 : p[K];
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+ } : (m, K) => {
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  var p;
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- return (p = V[x]) == null ? void 0 : p[i];
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+ return (p = V[K]) == null ? void 0 : p[m];
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  };
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- s.forEach((i) => {
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- const x = [];
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+ s.forEach((m) => {
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+ const K = [];
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  C.forEach((u) => {
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- var m;
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- const K = (m = r(u, i)) == null ? void 0 : m.value;
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- K !== void 0 && x.push(K);
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+ var c;
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+ const h = (c = r(u, m)) == null ? void 0 : c.value;
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+ h !== void 0 && K.push(h);
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  });
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- const p = P(B.method, x);
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+ const p = P(E.method, K);
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  C.forEach((u) => {
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- const m = r(u, i);
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- m !== void 0 && (m.normalizedValue = p(m.value), e[0] = Math.min(m.normalizedValue, e[0]), e[1] = Math.max(m.normalizedValue, e[1]));
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+ const c = r(u, m);
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+ c !== void 0 && (c.normalizedValue = p(c.value), e[0] = Math.min(c.normalizedValue, e[0]), e[1] = Math.max(c.normalizedValue, e[1]));
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  });
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  });
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  }), a.meta.valueExtent = e;
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  }
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- return a.meta.xKeysByGroups = E.reduce((e, l) => (e[l] = v.uniq(
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- v.flatten(a.meta.facetKeys.map((o) => a.facets[o].xKeysByGroups[l]))
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- ), e), {}), a.meta.yKeysByGroups = G.reduce((e, l) => (e[l] = v.uniq(
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- v.flatten(a.meta.facetKeys.map((o) => a.facets[o].yKeysByGroups[l]))
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+ return a.meta.xKeysByGroups = G.reduce((e, t) => (e[t] = v.uniq(
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+ v.flatten(a.meta.facetKeys.map((o) => a.facets[o].xKeysByGroups[t]))
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+ ), e), {}), a.meta.yKeysByGroups = d.reduce((e, t) => (e[t] = v.uniq(
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+ v.flatten(a.meta.facetKeys.map((o) => a.facets[o].yKeysByGroups[t]))
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  ), e), {}), a.meta.valueExtent[0] === 1 / 0 && (a.meta.valueExtent[0] = 0), a.meta.valueExtent[1] === -1 / 0 && (a.meta.valueExtent[1] = 0), a;
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  }
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  export {
package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/getCells.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"getCells.js","sources":["../../../../../../node_modules/@milaboratories/miplots4/src/heatmap/getCells.ts"],"sourcesContent":["import { deviation, extent, mean } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\n\nconst MAX_RENDERED_CELLS_COUNT = 500000;\nfunction normalizeByStd(values:number[]) {\n const stdValue = deviation(values);\n const meanValue = mean(values);\n\n if (stdValue === undefined || meanValue === undefined || stdValue === 0) {\n return (v:number) => v;\n }\n return (v:number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values:number[]) {\n const meanValue = mean(values);\n const [min, max] = extent(values);\n if (meanValue === undefined || min === undefined || max === undefined || max === min) {\n return (v:number) => v;\n }\n return (v:number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method:NormalizationMethod, values:number[]) {\n if (method === 'standardScaling') {\n return normalizeByStd(values);\n }\n if (method === 'meanNormalization') {\n return normalizeByMinMax(values);\n }\n return (v:number) => v;\n}\n\nexport type Cell = {\n isCell: true;\n idx: number;\n id: string;\n value: DataValue;\n normalizedValue: DataValue;\n x: DataValue;\n y: DataValue;\n};\n\nexport type GroupedCellsData = {\n meta: {\n facetKeys: string[];\n xGroupKeys: string[];\n yGroupKeys: string[];\n xKeysByGroups: Record<string, string[]>;\n yKeysByGroups: Record<string, string[]>;\n // for titles, if facet by more 1 columns title has several values separated by commas\n facetKeyValues: Record<string, string[]>;\n xGroupKeyValues: Record<string, string[]>;\n yGroupKeyValues: Record<string, string[]>;\n xLabels: Record<string, string>;\n yLabels: Record<string, string>;\n xGroupLabels: Record<string, string>;\n yGroupLabels: Record<string, string>;\n valueExtent: [number, number]; // for color scales\n // data for labels, annotations and dendrograms\n xDataByKeys: Record<string, Record<string, DataValue>>;\n yDataByKeys: Record<string, Record<string, DataValue>>;\n };\n //facet groups\n facets: Record<\n string,\n {\n // axis keys\n xKeys: string[];\n yKeys: string[];\n // axis keys grouped by group keys from meta\n xKeysByGroups: Record<string, string[]>;\n yKeysByGroups: Record<string, string[]>;\n // cells grouped by X, then by Y\n cells: Record<string, Record<string, Cell>>;\n }\n >;\n};\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n if (!keysLists.length) {\n return [];\n }\n let result: string[][] = [[]];\n keysLists.forEach(keys => {\n const nextResult: string[][] = [];\n keys.forEach(key => {\n nextResult.push(...result.map(resultItem => [...resultItem, key]));\n });\n result = nextResult;\n });\n return result;\n}\n\nexport function getCells(\n data: DataFrame,\n xColumn: ColumnName,\n yColumn: ColumnName,\n valueColumn: ColumnName,\n facetBy: ColumnName[],\n xGroupBy: ColumnName[],\n yGroupBy: ColumnName[],\n annotations: HeatmapSettingsImpl['annotations'],\n dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n normalization: HeatmapSettingsImpl['normalization'],\n NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n): GroupedCellsData {\n const dataSize = data.columnNames.length ? data.getColumn(data.columnNames[0]).length : 0;\n if (dataSize > MAX_RENDERED_CELLS_COUNT) {\n console.error(`Too many cells for graph rendering (${dataSize})`);\n }\n const facetKeysLists = facetBy.length\n ? facetBy.map(column => data.getColumnCategories(column.value))\n : [['null']];\n const xGroupKeysLists = xGroupBy.length\n ? xGroupBy.map(column => data.getColumnCategories(column.value))\n : [['null']];\n const yGroupKeysLists = yGroupBy.length\n ? yGroupBy.map(column => data.getColumnCategories(column.value))\n : [['null']];\n const facetKeysCombinations = getKeysCombinations(facetKeysLists);\n const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n const facetKeys = facetKeysCombinations.map(keys => keys.join('_'));\n const xGroupKeys = xGroupKeysCombinations.map(keys => keys.join('_'));\n const yGroupKeys = yGroupKeysCombinations.map(keys => keys.join('_'));\n\n const result: GroupedCellsData = {\n meta: {\n facetKeys,\n xGroupKeys,\n yGroupKeys,\n xKeysByGroups: {},\n yKeysByGroups: {},\n xLabels: {},\n yLabels: {},\n xGroupLabels: {},\n yGroupLabels: {},\n xDataByKeys: {},\n yDataByKeys: {},\n facetKeyValues: facetKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = facetKeysCombinations[index];\n return res;\n }, {}),\n xGroupKeyValues: xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = xGroupKeysCombinations[index];\n return res;\n }, {}),\n yGroupKeyValues: yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = yGroupKeysCombinations[index];\n return res;\n }, {}),\n valueExtent: [Infinity, -Infinity],\n },\n facets: {},\n };\n\n const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.value);\n const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.value);\n const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n for (let i = 0; i < data.rowsCount; i++) {\n const facetKey = facetBy.length ? facetBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n const xGroupKey = xGroupBy.length ? xGroupBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n const yGroupKey = yGroupBy.length ? 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data.getColumn(data.columnNames[0]).length : 0;\n if (dataSize > MAX_RENDERED_CELLS_COUNT) {\n console.error(`Too many cells for graph rendering (${dataSize})`);\n }\n const facetKeysLists = facetBy.length\n ? facetBy.map(column => data.getColumnCategories(column.value))\n : [['null']];\n const xGroupKeysLists = xGroupBy.length\n ? xGroupBy.map(column => data.getColumnCategories(column.value))\n : [['null']];\n const yGroupKeysLists = yGroupBy.length\n ? yGroupBy.map(column => data.getColumnCategories(column.value))\n : [['null']];\n const facetKeysCombinations = getKeysCombinations(facetKeysLists);\n const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n const facetKeys = facetKeysCombinations.map(keys => keys.join('_'));\n const xGroupKeys = xGroupKeysCombinations.map(keys => keys.join('_'));\n const yGroupKeys = yGroupKeysCombinations.map(keys => keys.join('_'));\n\n const result: GroupedCellsData = {\n meta: {\n facetKeys,\n xGroupKeys,\n yGroupKeys,\n xKeysByGroups: {},\n yKeysByGroups: {},\n xLabels: {},\n yLabels: {},\n xGroupLabels: {},\n yGroupLabels: {},\n xDataByKeys: {},\n yDataByKeys: {},\n facetKeyValues: facetKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = facetKeysCombinations[index];\n return res;\n }, {}),\n xGroupKeyValues: xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = xGroupKeysCombinations[index];\n return res;\n }, {}),\n yGroupKeyValues: yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = yGroupKeysCombinations[index];\n return res;\n }, {}),\n valueExtent: [Infinity, -Infinity],\n },\n facets: {},\n };\n\n const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.value);\n const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.value);\n const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n for (let i = 0; i < data.rowsCount; i++) {\n const facetKey = facetBy.length ? facetBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n const xGroupKey = xGroupBy.length ? xGroupBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n const yGroupKey = yGroupBy.length ? yGroupBy.map(column => data.getColumnValue(column.value, i)).join('_') : 'null';\n const xGroupLabel = xGroupBy.length ? xGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ') : '';\n const yGroupLabel = yGroupBy.length ? yGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ') : '';\n result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n result.meta.yGroupLabels[yGroupKey] = yGroupLabel;\n const x = String(data.getColumnValue(xColumn.value, i));\n const y = String(data.getColumnValue(yColumn.value, i));\n const value = (data.getColumnValue(valueColumn.value, i) ?? NAValueAs) as number | null;\n \n if (x === 'null' || y === 'null' || value === null) {\n continue;\n }\n\n if (!result.facets[facetKey]) {\n result.facets[facetKey] = {\n xKeys: [],\n yKeys: [],\n xKeysByGroups: {},\n yKeysByGroups: {},\n cells: {},\n };\n }\n if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n }\n if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n }\n result.facets[facetKey].xKeys.push(x);\n result.facets[facetKey].yKeys.push(y);\n result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n if (!result.facets[facetKey].cells[x]) {\n result.facets[facetKey].cells[x] = {};\n }\n result.meta.valueExtent[0] = Math.min(value, result.meta.valueExtent[0]);\n result.meta.valueExtent[1] = Math.max(value, result.meta.valueExtent[1]);\n if (result.facets[facetKey].cells[x][y] && result.facets[facetKey].cells[x][y].value !== value) {\n throw Error(`More than 1 value for x=${x}, y=${y}`);\n }\n const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n throw Error(`More than 1 x-label value for x=${x}`);\n }\n const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n throw Error(`More than 1 y-label value for y=${y}`);\n }\n result.meta.xLabels[x] = String(xLabelsSourceValue);\n result.meta.yLabels[y] = String(yLabelsSourceValue);\n // data for labels, annotations and dendrograms by X\n additionalDataColumnsX.forEach(columnKey => {\n const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n if (!isAddedColumn) {\n result.meta.xDataByKeys[columnKey] = {};\n }\n if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n }\n if (!isAddedValue) {\n result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n }\n });\n // data for labels, annotations and dendrograms by Y\n additionalDataColumnsY.forEach(columnKey => {\n const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n if (!isAddedColumn) {\n result.meta.yDataByKeys[columnKey] = {};\n }\n if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n }\n if (!isAddedValue) {\n result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n }\n });\n result.facets[facetKey].cells[x][y] = {\n isCell: true,\n idx: i,\n id: `${x}_${y}`,\n x,\n y,\n value,\n normalizedValue: value,\n };\n }\n\n result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n // make uniq x, y, x-group and y-group keys\n result.meta.facetKeys.forEach(facetKey => {\n const facet = result.facets[facetKey];\n facet.xKeys = lodash.uniq(facet.xKeys);\n facet.yKeys = lodash.uniq(facet.yKeys);\n xGroupKeys.forEach(xGroupKey => {\n result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.uniq(\n result.facets[facetKey].xKeysByGroups[xGroupKey]\n );\n });\n yGroupKeys.forEach(yGroupKey => {\n result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.uniq(\n result.facets[facetKey].yKeysByGroups[yGroupKey]\n );\n });\n });\n\n if (normalization) {\n const valueExtent = [Infinity, -Infinity] as [number, number];\n result.meta.facetKeys.forEach(facetKey => {\n const {xKeys, yKeys, cells} = result.facets[facetKey];\n const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n const cellGetter = normalization.direction === 'row'\n ? (cellKey:string, groupKey:string) => cells[cellKey]?.[groupKey]\n : (cellKey:string, groupKey:string) => cells[groupKey]?.[cellKey];\n groupKeys.forEach((groupKey) => {\n const values:number[] = [];\n cellKeys.forEach((cellKey) => {\n const v = cellGetter(cellKey, groupKey)?.value;\n if (v !== undefined) {\n values.push(v as number);\n }\n });\n const normalize = getNormalizationFn(normalization.method, values);\n cellKeys.forEach((cellKey) => {\n const cell = cellGetter(cellKey, groupKey);\n if (cell !== undefined) {\n cell.normalizedValue = normalize(cell.value as number);\n valueExtent[0] = Math.min(cell.normalizedValue, valueExtent[0]);\n valueExtent[1] = Math.max(cell.normalizedValue, valueExtent[1]);\n }\n });\n });\n });\n result.meta.valueExtent = valueExtent;\n }\n\n // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n result.meta.xKeysByGroups = xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n 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package/dist/node_modules/@milaboratories/miplots4/dist/heatmap/utils/calculateCaptionTails.js CHANGED
@@ -1,38 +1,38 @@
1
1
  import { MIN_STEP_FOR_VISIBLE_LABELS as I } from "../constants.js";
2
2
  const d = Math.cos(Math.PI / 4);
3
- function E(e, y, n, x, h, c, s, M, B, K) {
4
- const p = c[e], T = p > I;
3
+ function E(e, p, n, c, u, x, s, M, B, K) {
4
+ const f = x[e], T = f > I;
5
5
  let l = 0;
6
- return y.forEach((f) => {
7
- const i = h(e, f);
8
- if (i.length === 0)
6
+ return p.forEach((i) => {
7
+ const y = u(e, i);
8
+ if (y.length === 0)
9
9
  return 0;
10
- const a = i.length * p / 2, o = M ? K.getTextWidth(n[f]) * d - a - s(i[0]) : 0, G = B && T ? y.reduce((L, u) => {
11
- const b = x[u];
12
- return Math.max(L, K.getTextWidth(b) * d - p / 2 - s(u));
10
+ const a = y.length * f / 2, o = M ? K.getTextWidth(n[i] ?? i) * d - a - s(y[0]) : 0, G = B && T ? p.reduce((L, h) => {
11
+ const b = c[h];
12
+ return Math.max(L, K.getTextWidth(b) * d - f / 2 - s(h));
13
13
  }, 0) : 0;
14
14
  l = Math.max(l, o, G);
15
15
  }), l;
16
16
  }
17
- function g(e, y, n, x, h, c) {
18
- const { facetKeys: s, xGroupKeys: M, yGroupKeys: B, xKeysByGroups: K, yKeysByGroups: p, xLabels: T, yLabels: l, xGroupLabels: f, yGroupLabels: i } = h.meta;
17
+ function g(e, p, n, c, u, x) {
18
+ const { facetKeys: s, xGroupKeys: M, yGroupKeys: B, xKeysByGroups: K, yKeysByGroups: f, xLabels: T, yLabels: l, xGroupLabels: i, yGroupLabels: y } = u.meta;
19
19
  let a = 0, o = 0;
20
20
  const G = e.xGroupLabels === 45, L = e.xAxisLabels === 45;
21
21
  if (G || L)
22
- if (!y.sharedX)
22
+ if (!p.sharedX)
23
23
  s.forEach((t) => {
24
24
  a = Math.max(
25
25
  E(
26
26
  t,
27
27
  M,
28
- f,
28
+ i,
29
29
  T,
30
- (m, r) => h.facets[m].xKeysByGroups[r],
31
- x.x,
30
+ (m, r) => u.facets[m].xKeysByGroups[r],
31
+ c.x,
32
32
  n.x[t],
33
33
  G,
34
34
  L,
35
- c
35
+ x
36
36
  ),
37
37
  a
38
38
  );
@@ -43,34 +43,34 @@ function g(e, y, n, x, h, c) {
43
43
  E(
44
44
  t,
45
45
  M,
46
- f,
46
+ i,
47
47
  T,
48
48
  (m, r) => K[r],
49
- x.x,
49
+ c.x,
50
50
  n.x[t],
51
51
  G,
52
52
  L,
53
- c
53
+ x
54
54
  ),
55
55
  a
56
56
  );
57
57
  }
58
- const u = e.yGroupLabels === 45, b = e.yAxisLabels === 45;
59
- if (u || b)
60
- if (!y.sharedY)
58
+ const h = e.yGroupLabels === 45, b = e.yAxisLabels === 45;
59
+ if (h || b)
60
+ if (!p.sharedY)
61
61
  s.forEach((t) => {
62
62
  o = Math.max(
63
63
  E(
64
64
  t,
65
65
  B,
66
- i,
66
+ y,
67
67
  l,
68
- (m, r) => h.facets[m].yKeysByGroups[r],
69
- x.y,
68
+ (m, r) => u.facets[m].yKeysByGroups[r],
69
+ c.y,
70
70
  n.y[t],
71
- u,
71
+ h,
72
72
  b,
73
- c
73
+ x
74
74
  ),
75
75
  o
76
76
  );
@@ -81,14 +81,14 @@ function g(e, y, n, x, h, c) {
81
81
  E(
82
82
  t,
83
83
  B,
84
- i,
84
+ y,
85
85
  l,
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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@milaboratories/graph-maker",
3
- "version": "1.1.144",
3
+ "version": "1.1.145",
4
4
  "type": "module",
5
5
  "main": "dist/lib.js",
6
6
  "types": "dist/lib.d.ts",
@@ -37,7 +37,7 @@
37
37
  "dependencies": {
38
38
  "@ag-grid-community/core": "^32.3.3",
39
39
  "@milaboratories/helpers": "^1.6.15",
40
- "@milaboratories/miplots4": "^1.0.135",
40
+ "@milaboratories/miplots4": "^1.0.136",
41
41
  "@milaboratories/pf-plots": "^1.1.30",
42
42
  "@platforma-sdk/model": "^1.42.21",
43
43
  "@platforma-sdk/ui-vue": "^1.39.16",