@milaboratories/graph-maker 1.1.131 → 1.1.133

package/dist/node_modules/@milaboratories/helpers/dist/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sources":["../../../../../node_modules/@milaboratories/helpers/src/utils.ts","../../../../../node_modules/@milaboratories/helpers/src/objects.ts"],"sourcesContent":["import type { AwaitedStruct, Option, Primitive, Result, Unionize } from './types';\n\nexport function isNil(v: unknown): v is null | undefined | void {\n  return v === null || v === undefined;\n}\n\nexport function isPrimitive(v: unknown): v is Primitive {\n  return isNil(v)\n    || typeof v === 'string'\n    || typeof v === 'number'\n    || typeof v === 'boolean'\n    || typeof v === 'bigint'\n  ;\n}\n\nexport function notEmpty<T>(v: T | null | undefined, message?: string): T {\n  if (v === null || v === undefined) {\n    throw Error(message ?? 'Empty (null | undefined) value');\n  }\n\n  return v;\n}\n\nexport function notUndef<T>(v: T | undefined, message?: string): T {\n  if (v === undefined) {\n    throw Error(message ?? 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length + 1 : length;\n  }, 0);\n}\n\n/**\n * Performs a deep equality check between two values, `a` and `b`, to determine if they are JSON-equivalent.\n *\n * JSON equivalence means that the two values are strictly equal in structure and content, including arrays and plain objects.\n * Non-primitive values that are neither arrays nor plain objects will throw an error.\n *\n * @param a - The first value to compare.\n * @param b - The second value to compare.\n * @returns `true` if the values are JSON-equivalent, otherwise `false`.\n *\n * @throws If the values are non-primitive and not arrays or plain objects.\n *\n * @example\n * ```typescript\n * isJsonEqual(1, 1); // true\n * isJsonEqual({ a: 1 }, { a: 1 }); // true\n * isJsonEqual([1, 2], [1, 2]); // true\n * isJsonEqual({ a: 1 }, { a: 2 }); // false\n * isJsonEqual([1, 2], [2, 1]); // false\n * isJsonEqual(new Date(), new Date()); // Error\n * ```\n */\nexport function isJsonEqual(a: unknown, b: unknown): boolean {\n  if (!(isNonPrimitive(a) && isNonPrimitive(b))) {\n    return a === b;\n  }\n\n  if (isArray(a) && isArray(b)) {\n    if (a.length !== b.length) {\n      return false;\n    } else {\n      return [...a.keys()].every((k) => isJsonEqual(a[k], b[k]));\n    }\n  }\n\n  if (isPlainObject(a) && isPlainObject(b)) {\n    if (definedKeysSize(a) !== definedKeysSize(b)) {\n      return false;\n    }\n\n    return Object.keys(a).every((k) => isJsonEqual(a[k], b[k]));\n  }\n\n  /* eslint-disable @typescript-eslint/no-base-to-string */\n  throw Error(`Cannot compare a ${String(a)} and b ${String(b)}`);\n}\n\n/**\n * Alias to isJsonEqual function\n * @deprecated change to isJsonEqual\n */\nexport const deepEqual = isJsonEqual;\n\nexport function deepClone<T>(obj: T): T {\n  if (Array.isArray(obj)) {\n    const copy: any[] = [];\n    for (let i = 0; i < obj.length; i++) {\n      copy[i] = deepClone(obj[i]) as unknown;\n    }\n    return copy as T;\n  } else if (isPlainObject(obj)) {\n    const copy: Record<string, any> = {};\n    Object.keys(obj).forEach((k) => {\n      copy[k] = deepClone(obj[k]);\n    });\n    return copy as T;\n  } else {\n    return obj;\n  }\n}\n\nexport function shallowClone<T>(obj: T): T {\n  if (isNil(obj)) return obj;\n  if (Array.isArray(obj)) return obj.slice() as T;\n  if (isPlainObject(obj)) return Object.assign({}, obj) as T;\n  if (obj instanceof Map) return new Map(obj) as T;\n  if (obj instanceof Set) return new Set(obj) as T;\n  throw Error(`Not implemented clone strategy for ${JSON.stringify(obj)}`);\n}\n\nexport function shallowDiff<T>(to: T, from: T): Partial<T> {\n  const diff: Partial<T> = {};\n\n  for (const key in from) {\n    if (from[key] !== to[key]) {\n      diff[key] = to[key];\n    }\n  }\n\n  return diff;\n}\n\nexport function bindMethods<O extends Record<string, unknown>>(obj: O) {\n  Object.entries(obj).forEach(([key, m]) => {\n    if (m instanceof Function) {\n      // eslint-disable-next-line @typescript-eslint/no-unsafe-assignment\n      obj[key as keyof O] = m.bind(obj);\n    }\n  });\n\n  return obj;\n}\n\nexport function setProp<O, K extends keyof O>(obj: O, key: K, value: O[K]) {\n  obj[key] = value;\n  return obj;\n}\n\nexport function getProp<O, K extends keyof O>(obj: O, key: K): O[K] {\n  return obj[key];\n}\n\nexport function shiftProp<O, K extends keyof O>(obj: O, key: K): [O[K], Omit<O, K>] {\n  obj = { ...obj };\n  const val = obj[key];\n  delete obj[key];\n  return [val, obj];\n}\n\nexport function pick<T, K extends keyof T>(obj: T, ...keys: K[]): Pick<T, K> {\n  return Object.assign({}, ...keys.map((k) => ({ [k]: obj[k] }))) as Pick<T, K>;\n}\n\nexport function pickValues<T, K extends keyof T>(obj: T, ...keys: K[]) {\n  return keys.map((k) => obj[k]);\n}\n\nexport function omit<T, K extends keyof T>(obj: T, ...keys: K[]): Omit<T, K> {\n  const o = Object.assign({}, obj) as PartialBy<T, K>;\n  keys.forEach((k) => delete o[k]);\n  return o;\n}\n\n/**\n * Performs a deep patch of the target object or array using the source object or array.\n *\n * This function recursively merges properties of the source into the target:\n * - If a property in both target and source is a plain object, they are recursively merged.\n * - If a property in both target and source is an array of the same length, the arrays are recursively patched element by element.\n * - Otherwise, the property value in the target is replaced by the corresponding value from the source.\n *\n * The patch is applied in-place to the target object or array, which is also returned for convenience.\n *\n * @typeParam T - The type of the target and source, which must be either a plain object or an array.\n * @param target - The target object or array to be patched. 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package/dist/node_modules/@milaboratories/miplots4/dist/AbstractChart.js

@@ -0,0 +1,10 @@
+var a = Object.defineProperty, l = (r, t, e) => t in r ? a(r, t, { enumerable: !0, configurable: !0, writable: !0, value: e }) : r[t] = e, c = (r, t, e) => l(r, t + "", e);
+class s {
+  constructor(t, e) {
+    c(this, "calculatedData", null), this.data = t, this.settings = e;
+  }
+}
+export {
+  s as AbstractChart
+};
+//# sourceMappingURL=AbstractChart.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/AbstractChart.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"AbstractChart.js","sources":["../../../../../node_modules/@milaboratories/miplots4/src/AbstractChart.ts"],"sourcesContent":["import type {DataFrame, DataSet} from './DataFrame';\nimport type {Settings, SettingsInterface} from './types';\n\nexport interface ChartInterface {\n    calculatedData: Record<string, unknown> | null,\n    mount: (node: HTMLElement) => void,\n    unmount: () => void,\n    updateSettingsAndData: (data: DataSet, settings: Settings) => void,\n    updateChartState: (field: string, value: unknown) => void,\n    export: () => string\n}\n\nexport abstract class AbstractChart implements ChartInterface {\n    calculatedData = null as Record<string, unknown> | null;\n\n    protected constructor(public data: DataFrame, public settings:SettingsInterface) {\n    }\n\n    abstract mount(node: HTMLElement): void;\n\n    abstract unmount(): void;\n\n    abstract updateSettingsAndData(data: DataSet, settings: Settings): void;\n\n    abstract updateChartState(field: string, value: unknown): void;\n\n    abstract export():string;\n}\n"],"names":["AbstractChart","data","settings","__publicField"],"mappings":";AAYO,MAAeA,EAAwC;AAAA,EAGhD,YAAmBC,GAAwBC,GAA4B;AAFjFC,MAAA,MAAA,kBAAiB,IAAA,GAEY,KAAA,OAAAF,GAAwB,KAAA,WAAAC;AAAAA,EACrD;AAWJ;","x_google_ignoreList":[0]}

package/dist/node_modules/@milaboratories/miplots4/dist/DataFrame.js

@@ -0,0 +1,94 @@
+import { l as g } from "./node_modules/lodash/lodash.js";
+import { exhaustive as w } from "./utils/index.js";
+var d = Object.defineProperty, f = (o, t, r) => t in o ? d(o, t, { enumerable: !0, configurable: !0, writable: !0, value: r }) : o[t] = r, u = (o, t, r) => f(o, typeof t != "symbol" ? t + "" : t, r);
+const m = Symbol("noGrouped");
+function C(o) {
+  return "type" in o && o.type === "columns";
+}
+class p {
+  constructor(t, r) {
+    u(this, "id"), u(this, "data"), u(this, "rowsCount"), u(this, "columnNames"), u(this, "rows"), u(this, "mapColumnCategories", /* @__PURE__ */ new Map()), u(this, "rowsGrouped"), this.id = t, this.data = r, this.columnNames = Object.keys(r), this.rowsCount = this.columnNames.length ? r[this.columnNames[0]].length : 0, this.rows = this.computeRows();
+  }
+  static from(t) {
+    if (t instanceof p)
+      return t;
+    if (C(t))
+      return new p(t.id, t.values);
+    w(t, "Unknown input data format");
+  }
+  computeRows() {
+    const t = [];
+    for (let r = 0; r < this.rowsCount; r++)
+      t.push(
+        this.columnNames.reduce((e, s) => (e[s] = this.data[s][r], e), {})
+      );
+    return t;
+  }
+  getColumn(t) {
+    return this.data[t];
+  }
+  getColumnCategories(t, r = !0) {
+    if (!this.columnNames.includes(t))
+      throw new Error(`Column ${t} does not exist`);
+    const e = `${t}${r ? "" : "_not_null"}`;
+    if (!this.mapColumnCategories.has(e)) {
+      let s = this.getColumn(t);
+      r && (s = s.filter((n) => n !== null)), this.mapColumnCategories.set(e, g.uniq(s.map(String)));
+    }
+    return this.mapColumnCategories.get(e) ?? [];
+  }
+  setGrouping(t) {
+    const r = { grouped: {}, rows: this.rows };
+    let e = [r];
+    t.forEach((s) => {
+      const n = s === null ? [m] : this.getColumnCategories(s, !1), h = [];
+      e.forEach((i) => {
+        if (s === null)
+          i.grouped = {
+            [m]: {
+              rows: i.rows,
+              grouped: {}
+            }
+          }, h.push(i.grouped[m]);
+        else {
+          const c = g.groupBy(i.rows, (a) => String(a[s]));
+          i.grouped = n.reduce((a, l) => (a[l] = {
+            rows: c[l] ?? [],
+            grouped: {}
+          }, h.push(a[l]), a), {});
+        }
+      }), e = h;
+    }), this.rowsGrouped = r.grouped;
+  }
+  getColumnByGrouping(t, r) {
+    if (!this.rowsGrouped)
+      return [];
+    if (!t.length)
+      return this.rows.map((s) => Number(s[r]));
+    let e = { grouped: this.rowsGrouped, rows: this.rows };
+    return t.forEach((s) => {
+      const n = e.grouped[s ?? "null"];
+      if (!n)
+        return [];
+      e = n;
+    }), e.rows.map((s) => Number(s[r]));
+  }
+  getRowsByGrouping(t) {
+    if (!this.rowsGrouped)
+      return [];
+    if (!t.length)
+      return this.rows;
+    let r = { grouped: this.rowsGrouped, rows: this.rows };
+    return t.forEach((e) => {
+      const s = r.grouped[e];
+      if (!s)
+        return [];
+      r = s;
+    }), r.rows;
+  }
+}
+export {
+  p as DataFrame,
+  m as NO_GROUPED
+};
+//# sourceMappingURL=DataFrame.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/DataFrame.js.map

@@ -0,0 +1 @@
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package/dist/node_modules/@milaboratories/miplots4/dist/MiPlots.js

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+import { ChartDendro as n } from "./dendro/index.js";
+import { ChartDiscrete as c } from "./discrete/index.js";
+import { ChartHeatmap as u } from "./heatmap/index.js";
+import { ChartHistogram as m } from "./histogram/index.js";
+import { ChartScatterplot as p } from "./scatterplot/index.js";
+import { ChartScatterplotUmap as f } from "./scatterplot-umap/index.js";
+import { ChartBubble as d } from "./bubble/index.js";
+import { DataFrame as i } from "./DataFrame.js";
+import { exhaustive as l } from "./utils/index.js";
+var w = Object.defineProperty, C = (o, t, r) => t in o ? w(o, t, { enumerable: !0, configurable: !0, writable: !0, value: r }) : o[t] = r, s = (o, t, r) => C(o, typeof t != "symbol" ? t + "" : t, r);
+class h {
+  constructor(t) {
+    s(this, "node"), s(this, "chart"), this.chart = t;
+  }
+  static createChart(t, r, e) {
+    const { type: a } = r;
+    if (a === "discrete")
+      return new c(t, r, e);
+    if (a === "dendro")
+      return new n(t, r, e);
+    if (a === "scatterplot")
+      return new p(t, r, e);
+    if (a === "scatterplot-umap")
+      return new f(t, r, e);
+    if (a === "heatmap")
+      return new u(t, r, e);
+    if (a === "histogram")
+      return new m(t, r, e);
+    if (a === "bubble")
+      return new d(t, r, e);
+    l(a, `Unknown chart type: ${a}`);
+  }
+  static newPlot(t, r, e) {
+    const a = i.from(t);
+    return new this(h.createChart(a, r, e));
+  }
+  get calculatedData() {
+    return this.chart.calculatedData;
+  }
+  mount(t) {
+    this.node = t, this.chart.mount(t);
+  }
+  unmount() {
+    delete this.node, this.chart.unmount();
+  }
+  updateSettingsAndData(t, r) {
+    if (r.type !== this.chart.settings.type) {
+      const e = h.createChart(this.chart.data, r);
+      this.node ? (this.chart.unmount(), this.chart = e, this.chart.mount(this.node)) : this.chart = e;
+    } else
+      this.chart.updateSettingsAndData(i.from(t), r);
+  }
+  updateChartState(t, r) {
+    this.chart.updateChartState(t, r);
+  }
+  export() {
+    return this.chart.export();
+  }
+}
+export {
+  h as MiPlots
+};
+//# sourceMappingURL=MiPlots.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/MiPlots.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"MiPlots.js","sources":["../../../../../node_modules/@milaboratories/miplots4/src/MiPlots.ts"],"sourcesContent":["import type {AbstractChart, ChartInterface} from './AbstractChart';\nimport {ChartDendro} from './dendro';\nimport {ChartDiscrete} from './discrete';\nimport {ChartHeatmap} from './heatmap';\nimport {ChartHistogram} from './histogram';\nimport {ChartScatterplot} from './scatterplot';\nimport {ChartScatterplotUmap} from './scatterplot-umap';\nimport {ChartBubble} from './bubble';\nimport {DataFrame} from './DataFrame';\nimport type {\n    BubbleEventHandlers,\n    ChartEventHandlers,\n    DendroEventHandlers,\n    DiscreteEventHandlers,\n    HeatmapEventHandlers,\n    HistogramEventHandlers,\n    ScatterplotEventHandlers,\n    Settings,\n} from './types';\nimport {exhaustive} from './utils';\nimport type {DataSet} from './DataFrame';\n\nexport class MiPlots implements ChartInterface {\n    node?: HTMLElement;\n    chart: AbstractChart;\n\n    private 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package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/_commonjsHelpers.js

@@ -0,0 +1,9 @@
+var l = typeof globalThis < "u" ? globalThis : typeof window < "u" ? window : typeof global < "u" ? global : typeof self < "u" ? self : {};
+function t(o) {
+  return o && o.__esModule && Object.prototype.hasOwnProperty.call(o, "default") ? o.default : o;
+}
+export {
+  l as commonjsGlobal,
+  t as getDefaultExportFromCjs
+};
+//# sourceMappingURL=_commonjsHelpers.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/_commonjsHelpers.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"_commonjsHelpers.js","sources":[],"sourcesContent":[],"names":[],"mappings":";;;;"}

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/browser.js

@@ -0,0 +1,5 @@
+var r = { exports: {} };
+export {
+  r as __module
+};
+//# sourceMappingURL=browser.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/browser.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"browser.js","sources":[],"sourcesContent":[],"names":[],"mappings":";"}

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/debug.js

@@ -0,0 +1,5 @@
+var e = { exports: {} };
+export {
+  e as __module
+};
+//# sourceMappingURL=debug.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/debug.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"debug.js","sources":[],"sourcesContent":[],"names":[],"mappings":";"}

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/index.js

@@ -0,0 +1,9 @@
+import { getDefaultExportFromCjs as r } from "./_commonjsHelpers.js";
+import { __require as o } from "../node_modules/react/index.js";
+var s = o();
+const e = /* @__PURE__ */ r(s);
+export {
+  e as default,
+  s as r
+};
+//# sourceMappingURL=index.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sources":[],"sourcesContent":[],"names":[],"mappings":";;;;"}

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/index2.js

@@ -0,0 +1,5 @@
+var e = { exports: {} };
+export {
+  e as __module
+};
+//# sourceMappingURL=index2.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/index2.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index2.js","sources":[],"sourcesContent":[],"names":[],"mappings":";"}

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/index3.js

@@ -0,0 +1,5 @@
+var e = { exports: {} };
+export {
+  e as __module
+};
+//# sourceMappingURL=index3.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/index3.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index3.js","sources":[],"sourcesContent":[],"names":[],"mappings":";"}

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/index4.js

@@ -0,0 +1,5 @@
+var e = { exports: {} };
+export {
+  e as __module
+};
+//# sourceMappingURL=index4.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/index4.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index4.js","sources":[],"sourcesContent":[],"names":[],"mappings":";"}

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/jsx-runtime.js

@@ -0,0 +1,5 @@
+var e = { exports: {} };
+export {
+  e as __module
+};
+//# sourceMappingURL=jsx-runtime.js.map

package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/jsx-runtime.js.map

@@ -0,0 +1 @@
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package/dist/node_modules/@milaboratories/miplots4/dist/_virtual/lodash.js

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+};
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+};
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+};
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package/dist/node_modules/@milaboratories/miplots4/dist/bubble/BubbleSettingsImpl.js

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+import { DEFAULT_WIDTH_SMALL as v, DEFAULT_WIDTH as A, DEFAULT_HEIGHT_SMALL as y, DEFAULT_HEIGHT as b, BLACK as g } from "../constants.js";
+import "../types/common.js";
+import "../types/discrete.js";
+import "../types/scatterplot.js";
+import "../types/heatmap.js";
+import "../types/dendro.js";
+import "../types/histogram.js";
+import { BubblesSettingsSchema as f } from "../types/bubble.js";
+import x from "../node_modules/lodash/lodash.js";
+var S = Object.defineProperty, L = (s, t, e) => t in s ? S(s, t, { enumerable: !0, configurable: !0, writable: !0, value: e }) : s[t] = e, i = (s, t, e) => L(s, typeof t != "symbol" ? t + "" : t, e);
+class k {
+  constructor(t) {
+    i(this, "id"), i(this, "type", "bubble"), i(this, "facetSettings"), i(this, "valueColumnSize"), i(this, "valueColumnColor"), i(this, "xColumn"), i(this, "yColumn"), i(this, "facetBy"), i(this, "normalization"), i(this, "NAValueAs"), i(this, "chartSettings"), i(this, "aes");
+    var e, l, a, n, u, r, h, m, c, p;
+    f.parse(t), this.id = x.uniqueId("settings"), this.facetSettings = { titlePosition: "left", ...t.facetSettings }, this.facetBy = t.facetBy ?? [], this.valueColumnSize = t.valueSize, this.valueColumnColor = t.valueColor, this.xColumn = t.xColumn, this.yColumn = t.yColumn, this.NAValueAs = t.NAValueAs ?? null, this.normalization = t.normalization ?? null;
+    const o = ((e = t.size) == null ? void 0 : e.cellSize) ?? null, C = o ? null : ((l = t == null ? void 0 : t.size) == null ? void 0 : l.width) ?? (this.facetBy.length ? v : A), d = o ? null : ((a = t == null ? void 0 : t.size) == null ? void 0 : a.height) ?? (this.facetBy.length ? y : b);
+    this.chartSettings = {
+      size: { width: C, height: d, cellSize: o },
+      title: {
+        position: "center",
+        show: !0,
+        ...t.title,
+        name: ((n = t.title) == null ? void 0 : n.name) ?? "Chart"
+      },
+      yAxis: {
+        title: t.yColumn.label ?? t.yColumn.value,
+        showTicks: !0,
+        showTitle: !0,
+        showAxisLabels: !0,
+        position: "left",
+        axisLabelsAngle: 90,
+        sorting: "asc",
+        ...t.yAxis
+      },
+      xAxis: {
+        title: t.xColumn.label ?? t.xColumn.value,
+        showTicks: !0,
+        showTitle: !0,
+        showAxisLabels: !0,
+        position: "bottom",
+        axisLabelsAngle: 90,
+        sorting: "asc",
+        ...t.xAxis
+      },
+      frame: { type: ((u = t.frame) == null ? void 0 : u.type) ?? "full" },
+      legend: {
+        show: !0,
+        position: "right",
+        ...t.legend
+      },
+      tooltips: {
+        show: !0,
+        ...t.tooltips
+      }
+    }, this.aes = {
+      minRadius: ((r = t.aes) == null ? void 0 : r.minRadius) ?? 3,
+      maxRadius: ((h = t.aes) == null ? void 0 : h.maxRadius) ?? 20,
+      colorsList: ((m = t.aes) == null ? void 0 : m.colorsList) ?? ["black", "white", "red"],
+      cellStrokeColor: ((c = t.aes) == null ? void 0 : c.cellStrokeColor) ?? g,
+      emptyCellColor: ((p = t.aes) == null ? void 0 : p.emptyCellColor) ?? "white"
+    };
+  }
+}
+export {
+  k as BubbleSettingsImpl
+};
+//# sourceMappingURL=BubbleSettingsImpl.js.map

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