@michaelborck/honeyguide-core 0.6.0 → 0.7.0

package/dist/pipeline.js

@@ -3,12 +3,19 @@ import { retrievePodcasts } from './retrieval/podcasts.js';
 import { retrieveBooks } from './retrieval/books.js';
 import { retrieveVideos } from './retrieval/videos.js';
 import { retrieveWeb } from './retrieval/web.js';
+import { createSearchProvider } from './retrieval/search/index.js';
 import { deriveCounterQueries } from './retrieval/counterpoint.js';
 import { verifyCandidate } from './verify/verify.js';
 import { classifySource } from './enrich/sourceType.js';
 import { fetchPageMeta } from './enrich/page.js';
+import { lookupUnpaywall } from './enrich/unpaywall.js';
+import { createOutcomeAligner } from './align/outcomes.js';
+import { applyConstraints } from './brief.js';
+import { addAlignmentReasons } from './align/reasons.js';
 import { annotate } from './annotate/ladder.js';
 import { diversify } from './rank/diversity.js';
+import { createReranker } from './rank/reranker.js';
+import { orderByScores } from './rank/semantic.js';
 import { deriveQuery } from './retrieval/query.js';
 const DEFAULT_MAX_RESULTS = 10;
 const ANNOTATE_CONCURRENCY = 3;
@@ -19,10 +26,11 @@ const ANNOTATE_CONCURRENCY = 3;
  * (ADR-0011). Counterpoint mode adds a second retrieval pass that
  * deliberately hunts disagreeing material (spec §3 point 3).
  */
-export async function suggestResources(request, config = {}) {
+export async function suggestResources(request, config = {}, onProgress) {
     const input = request.input.trim();
     if (!input)
         return { resources: [], componentHealth: {} };
+    onProgress?.({ stage: 'query' });
     const maxResults = request.maxResults ?? DEFAULT_MAX_RESULTS;
     const health = {};
     const seenUrls = new Set();
@@ -31,12 +39,19 @@ export async function suggestResources(request, config = {}) {
     // term-frequency fallback). Short inputs pass through unchanged.
     const topic = await deriveQuery(input, config);
     // --- Retrieve, one component per source type -------------------------
+    onProgress?.({ stage: 'retrieve' });
+    const webProvider = createSearchProvider(config);
+    const reranker = createReranker(config);
+    const paperOptions = {
+        mailto: config.mailto,
+        semanticScholarApiKey: config.semanticScholarApiKey,
+    };
     const sources = [
-        ['papers', retrievePapers(topic, config.mailto)],
+        ['papers', retrievePapers(topic, paperOptions)],
         ['podcasts', retrievePodcasts(topic)],
         ['books', retrieveBooks(topic)],
         ['videos', config.youtubeApiKey ? retrieveVideos(topic, config.youtubeApiKey) : null],
-        ['web', config.searxngUrl ? retrieveWeb(topic, config.searxngUrl) : null],
+        ['web', webProvider ? retrieveWeb(topic, webProvider) : null],
     ];
     const settled = await Promise.allSettled(sources.map(([, p]) => p ?? Promise.reject(new Error('not configured'))));
     const candidates = [];
@@ -50,18 +65,19 @@ export async function suggestResources(request, config = {}) {
             health[name] = 'unavailable';
         }
     });
-    const selected = await selectUsable(candidates, maxResults, 'supporting');
+    const selected = await selectUsable(applyConstraints(candidates, request.constraints), maxResults, 'supporting');
     await enrichAll(selected, topic, config, stats);
     const resources = selected.map(({ resource }) => resource);
     // --- Counterpoint pass (spec §3 point 3) -----------------------------
     if (request.counterpoint) {
         try {
+            onProgress?.({ stage: 'retrieve', detail: 'Counterpoints' });
             const queries = await deriveCounterQueries(topic, config);
             const counterSettled = await Promise.allSettled(queries.flatMap((q) => [
-                retrievePapers(q, config.mailto),
-                ...(config.searxngUrl ? [retrieveWeb(q, config.searxngUrl)] : []),
+                retrievePapers(q, paperOptions),
+                ...(webProvider ? [retrieveWeb(q, webProvider)] : []),
             ]));
-            const counterCandidates = dedupeAgainst(seenUrls, counterSettled.flatMap((o) => (o.status === 'fulfilled' ? o.value : [])));
+            const counterCandidates = applyConstraints(dedupeAgainst(seenUrls, counterSettled.flatMap((o) => (o.status === 'fulfilled' ? o.value : []))), request.constraints);
             const counterCount = Math.max(2, Math.floor(maxResults / 3));
             const counterSelected = await selectUsable(counterCandidates, counterCount, 'counterpoint');
             await enrichAll(counterSelected, topic, config, stats);
@@ -72,6 +88,29 @@ export async function suggestResources(request, config = {}) {
             health.counterpoint = 'unavailable';
         }
     }
+    // --- Optional outcome alignment (ADR-0017) ---------------------------
+    if (request.outcomes?.length && resources.length) {
+        onProgress?.({ stage: 'align' });
+        const aligner = createOutcomeAligner(config);
+        if (!aligner) {
+            health.alignment = 'unavailable';
+        }
+        else {
+            try {
+                const alignments = await aligner.align(topic, resources, request.outcomes);
+                for (const resource of resources) {
+                    resource.alignment = alignments.get(resource) ?? null;
+                }
+                await addAlignmentReasons(resources, topic, config);
+                health.alignment = resources.some((resource) => resource.alignment)
+                    ? 'ok'
+                    : 'degraded';
+            }
+            catch {
+                health.alignment = 'unavailable';
+            }
+        }
+    }
     health.thumbnails =
         stats.thumbnailFailures === 0
             ? 'ok'
@@ -85,15 +124,33 @@ export async function suggestResources(request, config = {}) {
             : stats.llmSuccesses > 0
                 ? 'degraded'
                 : 'unavailable';
+    onProgress?.({ stage: 'done' });
     return { resources, componentHealth: health };
     /** Verify, drop dead links, pick a diverse set, pair candidate+resource. */
     async function selectUsable(pool, count, stance) {
+        onProgress?.({ stage: 'verify' });
         const verified = new Map();
         await Promise.all(pool.map(async (c) => {
             verified.set(c, await verifyCandidate(c));
         }));
-        const usable = pool.filter((c) => verified.get(c) !== 'dead');
-        const preliminary = usable.map((c) => toResource(c, verified.get(c) ?? 'unverified', stance));
+        const usable = pool.filter((c) => verified.get(c)?.status !== 'dead');
+        // Optional re-ranking (ADR-0015, ADR-0016): a local System One decision
+        // model when configured, otherwise embeddings. Order by relevance first,
+        // then let diversity balancing pick the best of each format. Failure is
+        // non-fatal — the original retrieval order remains.
+        let ranked = usable;
+        if (reranker) {
+            try {
+                const scores = await reranker.score(topic, usable);
+                ranked = orderByScores(usable, scores);
+                health.reranker = 'ok';
+            }
+            catch {
+                health.reranker = 'unavailable';
+            }
+        }
+        onProgress?.({ stage: 'rank' });
+        const preliminary = ranked.map((c) => toResource(c, verified.get(c) ?? { status: 'unverified', basis: 'none' }, stance));
         const chosen = diversify(preliminary, count);
         return chosen.map((resource) => ({
             candidate: usable[preliminary.indexOf(resource)],
@@ -103,7 +160,13 @@ export async function suggestResources(request, config = {}) {
     /** Page-meta + screenshot thumbnails (ADR-0005) and annotation (ADR-0011). */
     async function enrichAll(pairs, annotateTopic, cfg, s) {
         s.enriched += pairs.length;
-        await mapLimit(pairs, ANNOTATE_CONCURRENCY, async ({ candidate, resource }) => {
+        onProgress?.({
+            stage: 'annotate',
+            detail: 'Rationales',
+            current: 0,
+            total: pairs.length,
+        });
+        await mapLimit(pairs, ANNOTATE_CONCURRENCY, async ({ candidate, resource }, index) => {
             if ((!candidate.thumbnailUrl || !candidate.description) && !candidate.doi) {
                 try {
                     const meta = await fetchPageMeta(candidate.url);
@@ -125,11 +188,32 @@ export async function suggestResources(request, config = {}) {
                     // screenshots are a bonus, never a failure
                 }
             }
+            // Paywall truth for papers: Unpaywall is authoritative when a DOI and
+            // a contact email are available. Non-fatal; unknown stays unknown.
+            if (cfg.mailto &&
+                candidate.format === 'paper' &&
+                candidate.doi &&
+                resource.access === 'unknown') {
+                try {
+                    const info = await lookupUnpaywall(candidate.doi, cfg.mailto);
+                    if (info)
+                        resource.access = info.access;
+                }
+                catch {
+                    // enrichment is a bonus, never a failure
+                }
+            }
             if (cfg.ollamaUrl)
                 s.llmAttempts += 1;
-            resource.annotation = await annotate(annotateTopic, candidate, cfg, true, resource.stance);
+            resource.annotation = await annotate(annotateTopic, candidate, cfg, true, resource.stance, request.context);
             if (resource.annotation.source === 'llm')
                 s.llmSuccesses += 1;
+            onProgress?.({
+                stage: 'annotate',
+                detail: 'Rationales',
+                current: index + 1,
+                total: pairs.length,
+            });
         });
     }
 }
@@ -155,14 +239,35 @@ function toResource(candidate, verification, stance) {
         authors: candidate.authors,
         year: candidate.year,
         venue: candidate.venue ?? null,
-        verification,
+        verification: verification.status,
+        verificationBasis: verification.basis,
+        access: initialAccess(candidate),
         commerciallyInterested,
         licensing: candidate.licensing ?? 'unknown',
         annotation: { source: 'none', text: null },
         thumbnailUrl: candidate.thumbnailUrl ?? null,
         accessibilityNotes: candidate.accessibilityNotes ?? [],
+        alignment: null,
     };
 }
+/**
+ * Seed access from the retrieval source's licensing signal. Only papers get
+ * a meaningful value; Unpaywall refines it later when a DOI and mailto exist.
+ */
+function initialAccess(candidate) {
+    if (candidate.format !== 'paper')
+        return 'unknown';
+    switch (candidate.licensing) {
+        case 'oer':
+        case 'creative-commons':
+        case 'link-only':
+            return 'open';
+        case 'library-subscription':
+            return 'subscription';
+        default:
+            return 'unknown';
+    }
+}
 async function mapLimit(items, limit, fn) {
     let next = 0;
     const workers = Array.from({ length: Math.min(limit, items.length) }, async () => {

package/dist/pipeline.js.map

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package/dist/rank/decision.d.ts

@@ -0,0 +1,59 @@
+import type { Candidate } from '../retrieval/candidates.js';
+import type { Reranker } from './reranker.js';
+export declare const MAX_DECISION_CANDIDATES = 16;
+export interface SystemOneCandidate {
+    id: string;
+    title: string;
+    venue?: string;
+    description?: string;
+}
+export interface SystemOneQuestion {
+    type: 'noul';
+    instructions: string;
+    criteria: {
+        true: string;
+        false: string;
+    };
+}
+export interface SystemOneRequest {
+    model: string;
+    state: {
+        topic: string;
+        candidates: SystemOneCandidate[];
+    };
+    questions: Record<string, SystemOneQuestion>;
+    keep_alive: string;
+}
+export interface BuiltSystemOneRequest {
+    request: SystemOneRequest;
+    idToCandidate: Map<string, Candidate>;
+}
+/**
+ * Pick a bounded shortlist that still represents every format. Retrieval
+ * returns papers first, so a naive slice would spend the whole decision-model
+ * budget on papers and leave the podcasts/books that diversity will also pick
+ * unscored. Round-robin by format instead.
+ */
+export declare function balancedSubset(candidates: Candidate[], max: number): Candidate[];
+/**
+ * Build one `/v1/systemone` request for a topic and its shortlist: one Noul
+ * per candidate, all evaluated against the same state. This is the Jev-style
+ * re-ranking pattern, and Ollama's decision models speak the same API.
+ */
+export declare function buildSystemOneRequest(topic: string, candidates: Candidate[], model: string): BuiltSystemOneRequest;
+/** Pull the Noul probabilities back out, keyed by the original candidates. */
+export declare function parseSystemOneScores(response: unknown, idToCandidate: Map<string, Candidate>): Map<Candidate, number>;
+/**
+ * Local System One reranker (ADR-0016). Ollama >= 0.35 exposes the
+ * Jev-compatible `/v1/systemone` endpoint for decision models such as
+ * `tev1:0.8b`, `tev1:4b`, `nimble` and `clef`. No API key, no network, no
+ * per-token bill.
+ */
+export declare class OllamaDecisionReranker implements Reranker {
+    private readonly baseUrl;
+    private readonly model;
+    private readonly apiKey?;
+    readonly name = "ollama-systemone";
+    constructor(baseUrl: string, model?: string, apiKey?: string | undefined);
+    score(topic: string, candidates: Candidate[]): Promise<Map<Candidate, number>>;
+}

package/dist/rank/decision.js

@@ -0,0 +1,124 @@
+const TIMEOUT_MS = 30_000;
+// Tev1 runs with a ~2k-token context and the docs advise short inputs, so
+// score a bounded shortlist with truncated metadata.
+export const MAX_DECISION_CANDIDATES = 16;
+const MAX_TITLE_CHARS = 180;
+const MAX_DESCRIPTION_CHARS = 240;
+/**
+ * Pick a bounded shortlist that still represents every format. Retrieval
+ * returns papers first, so a naive slice would spend the whole decision-model
+ * budget on papers and leave the podcasts/books that diversity will also pick
+ * unscored. Round-robin by format instead.
+ */
+export function balancedSubset(candidates, max) {
+    const groups = new Map();
+    for (const candidate of candidates) {
+        const group = groups.get(candidate.format) ?? [];
+        group.push(candidate);
+        groups.set(candidate.format, group);
+    }
+    const out = [];
+    for (let round = 0; out.length < max; round++) {
+        let added = false;
+        for (const group of groups.values()) {
+            const candidate = group[round];
+            if (!candidate)
+                continue;
+            out.push(candidate);
+            added = true;
+            if (out.length >= max)
+                break;
+        }
+        if (!added)
+            break;
+    }
+    return out;
+}
+/**
+ * Build one `/v1/systemone` request for a topic and its shortlist: one Noul
+ * per candidate, all evaluated against the same state. This is the Jev-style
+ * re-ranking pattern, and Ollama's decision models speak the same API.
+ */
+export function buildSystemOneRequest(topic, candidates, model) {
+    const idToCandidate = new Map();
+    const items = [];
+    const questions = {};
+    balancedSubset(candidates, MAX_DECISION_CANDIDATES).forEach((candidate, index) => {
+        const id = `c${index}`;
+        idToCandidate.set(id, candidate);
+        items.push({
+            id,
+            title: candidate.title.slice(0, MAX_TITLE_CHARS),
+            venue: candidate.venue?.slice(0, 80),
+            description: candidate.description?.slice(0, MAX_DESCRIPTION_CHARS),
+        });
+        questions[id] = {
+            type: 'noul',
+            instructions: `Is \`candidates[${index}]\` a resource a lecturer would plausibly ` +
+                `use when teaching \`topic\`?`,
+            criteria: {
+                true: 'Directly relevant to the topic; a lecturer could reasonably assign or recommend it.',
+                false: 'Only tangentially related, off-topic, or not useful for teaching this topic.',
+            },
+        };
+    });
+    return {
+        request: {
+            model,
+            state: { topic, candidates: items },
+            questions,
+            keep_alive: '5m',
+        },
+        idToCandidate,
+    };
+}
+/** Pull the Noul probabilities back out, keyed by the original candidates. */
+export function parseSystemOneScores(response, idToCandidate) {
+    const answers = response
+        ?.answers ?? {};
+    const scores = new Map();
+    for (const [id, answer] of Object.entries(answers)) {
+        const candidate = idToCandidate.get(id);
+        if (candidate && typeof answer?.noul === 'number') {
+            scores.set(candidate, answer.noul);
+        }
+    }
+    return scores;
+}
+/**
+ * Local System One reranker (ADR-0016). Ollama >= 0.35 exposes the
+ * Jev-compatible `/v1/systemone` endpoint for decision models such as
+ * `tev1:0.8b`, `tev1:4b`, `nimble` and `clef`. No API key, no network, no
+ * per-token bill.
+ */
+export class OllamaDecisionReranker {
+    baseUrl;
+    model;
+    apiKey;
+    name = 'ollama-systemone';
+    constructor(baseUrl, model = 'tev1:0.8b', apiKey) {
+        this.baseUrl = baseUrl;
+        this.model = model;
+        this.apiKey = apiKey;
+    }
+    async score(topic, candidates) {
+        if (!candidates.length)
+            return new Map();
+        const { request, idToCandidate } = buildSystemOneRequest(topic, candidates, this.model);
+        if (!Object.keys(request.questions).length)
+            return new Map();
+        const headers = { 'content-type': 'application/json' };
+        if (this.apiKey)
+            headers.authorization = `Bearer ${this.apiKey}`;
+        const res = await fetch(`${this.baseUrl.replace(/\/$/, '')}/v1/systemone`, {
+            method: 'POST',
+            headers,
+            body: JSON.stringify(request),
+            signal: AbortSignal.timeout(TIMEOUT_MS),
+        });
+        if (!res.ok)
+            throw new Error(`Ollama System One HTTP ${res.status}`);
+        return parseSystemOneScores(await res.json(), idToCandidate);
+    }
+}
+//# sourceMappingURL=decision.js.map

package/dist/rank/decision.js.map

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package/dist/rank/embeddings.d.ts

@@ -0,0 +1,41 @@
+/**
+ * Embedding providers for semantic re-ranking (ADR-0015). The interface is
+ * deliberately small so an ONNX or other local runtime can be added without
+ * touching the pipeline.
+ */
+export interface EmbeddingProvider {
+    readonly name: string;
+    embed(texts: string[]): Promise<number[][]>;
+}
+/**
+ * Ollama embeddings. Uses the batch `/api/embed` endpoint (current Ollama)
+ * and falls back to the older single-text `/api/embeddings` endpoint.
+ */
+export declare class OllamaEmbeddingProvider implements EmbeddingProvider {
+    private readonly baseUrl;
+    private readonly model;
+    private readonly apiKey?;
+    readonly name = "ollama";
+    constructor(baseUrl: string, model: string, apiKey?: string | undefined);
+    embed(texts: string[]): Promise<number[][]>;
+}
+/**
+ * Process-local cache so repeated topics and resources do not re-embed. The
+ * cache is small and evicts the oldest entries; embeddings are deterministic
+ * for a given model, so this is safe.
+ */
+export declare class CachedEmbeddingProvider implements EmbeddingProvider {
+    private readonly inner;
+    private readonly maxEntries;
+    readonly name: string;
+    private readonly cache;
+    constructor(inner: EmbeddingProvider, maxEntries?: number);
+    embed(texts: string[]): Promise<number[][]>;
+    private set;
+}
+/** Build the configured embedding provider, or null when re-ranking is off. */
+export declare function createEmbeddingProvider(options: {
+    embeddingUrl?: string;
+    embeddingModel?: string;
+    embeddingApiKey?: string;
+}): EmbeddingProvider | null;

package/dist/rank/embeddings.js

@@ -0,0 +1,98 @@
+const EMBED_TIMEOUT_MS = 15_000;
+/**
+ * Ollama embeddings. Uses the batch `/api/embed` endpoint (current Ollama)
+ * and falls back to the older single-text `/api/embeddings` endpoint.
+ */
+export class OllamaEmbeddingProvider {
+    baseUrl;
+    model;
+    apiKey;
+    name = 'ollama';
+    constructor(baseUrl, model, apiKey) {
+        this.baseUrl = baseUrl;
+        this.model = model;
+        this.apiKey = apiKey;
+    }
+    async embed(texts) {
+        if (!texts.length)
+            return [];
+        const base = this.baseUrl.replace(/\/$/, '');
+        const headers = { 'content-type': 'application/json' };
+        if (this.apiKey)
+            headers.authorization = `Bearer ${this.apiKey}`;
+        const res = await fetch(`${base}/api/embed`, {
+            method: 'POST',
+            headers,
+            body: JSON.stringify({ model: this.model, input: texts }),
+            signal: AbortSignal.timeout(EMBED_TIMEOUT_MS),
+        });
+        if (res.ok) {
+            const data = (await res.json());
+            if (Array.isArray(data.embeddings) && data.embeddings.length === texts.length) {
+                return data.embeddings;
+            }
+        }
+        // Older Ollama: one prompt at a time.
+        const out = [];
+        for (const text of texts) {
+            const single = await fetch(`${base}/api/embeddings`, {
+                method: 'POST',
+                headers,
+                body: JSON.stringify({ model: this.model, prompt: text }),
+                signal: AbortSignal.timeout(EMBED_TIMEOUT_MS),
+            });
+            if (!single.ok)
+                throw new Error(`Ollama embeddings HTTP ${single.status}`);
+            const data = (await single.json());
+            if (!data.embedding)
+                throw new Error('Ollama returned no embedding');
+            out.push(data.embedding);
+        }
+        return out;
+    }
+}
+/**
+ * Process-local cache so repeated topics and resources do not re-embed. The
+ * cache is small and evicts the oldest entries; embeddings are deterministic
+ * for a given model, so this is safe.
+ */
+export class CachedEmbeddingProvider {
+    inner;
+    maxEntries;
+    name;
+    cache = new Map();
+    constructor(inner, maxEntries = 500) {
+        this.inner = inner;
+        this.maxEntries = maxEntries;
+        this.name = inner.name;
+    }
+    async embed(texts) {
+        const missing = [...new Set(texts.filter((t) => !this.cache.has(t)))];
+        if (missing.length) {
+            const vectors = await this.inner.embed(missing);
+            missing.forEach((text, i) => {
+                if (vectors[i])
+                    this.set(text, vectors[i]);
+            });
+        }
+        const out = texts.map((text) => this.cache.get(text));
+        if (out.some((v) => !v))
+            throw new Error('embedding cache miss after fill');
+        return out;
+    }
+    set(text, vector) {
+        if (this.cache.size >= this.maxEntries) {
+            const oldest = this.cache.keys().next().value;
+            if (oldest !== undefined)
+                this.cache.delete(oldest);
+        }
+        this.cache.set(text, vector);
+    }
+}
+/** Build the configured embedding provider, or null when re-ranking is off. */
+export function createEmbeddingProvider(options) {
+    if (!options.embeddingUrl)
+        return null;
+    return new CachedEmbeddingProvider(new OllamaEmbeddingProvider(options.embeddingUrl, options.embeddingModel ?? 'nomic-embed-text', options.embeddingApiKey));
+}
+//# sourceMappingURL=embeddings.js.map

package/dist/rank/embeddings.js.map

@@ -0,0 +1 @@
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package/dist/rank/reranker.d.ts

@@ -0,0 +1,21 @@
+import type { Candidate } from '../retrieval/candidates.js';
+import type { PipelineConfig } from '../config.js';
+import { type EmbeddingProvider } from './embeddings.js';
+/** A re-ranker scores retrieved candidates against the topic. */
+export interface Reranker {
+    readonly name: string;
+    score(topic: string, candidates: Candidate[]): Promise<Map<Candidate, number>>;
+}
+/** Embedding-based re-ranking (ADR-0015). */
+export declare class EmbeddingReranker implements Reranker {
+    private readonly provider;
+    readonly name = "embeddings";
+    constructor(provider: EmbeddingProvider);
+    score(topic: string, candidates: Candidate[]): Promise<Map<Candidate, number>>;
+}
+/**
+ * Pick the best available local re-ranker (ADR-0015, ADR-0016). A System One
+ * decision model is preferred when configured because it judges relevance
+ * directly; embeddings are the fallback. With neither, ranking is unchanged.
+ */
+export declare function createReranker(config: PipelineConfig): Reranker | null;