@metriport/fhir-sdk 1.3.7 → 1.4.0

package/dist/__tests__/coding-utilities.test.js

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+"use strict";
+/* eslint-disable @typescript-eslint/no-non-null-assertion */
+/* eslint-disable @typescript-eslint/no-explicit-any */
+Object.defineProperty(exports, "__esModule", { value: true });
+const index_1 = require("../index");
+/**
+ * Tests for coding system utilities
+ * Note: Runtime proxies wrap CodeableConcept and Coding properties.
+ * Type assertions (as any) are used where TypeScript doesn't infer the wrapper.
+ */
+describe("Coding System Utilities", () => {
+    describe("SmartCoding - Individual Coding Methods", () => {
+        const loincCoding = {
+            system: "http://loinc.org",
+            code: "8867-4",
+            display: "Heart rate",
+        };
+        const snomedCoding = {
+            system: "http://snomed.info/sct",
+            code: "73211009",
+            display: "Diabetes mellitus",
+        };
+        const bundle = {
+            resourceType: "Bundle",
+            type: "collection",
+            entry: [
+                {
+                    resource: {
+                        resourceType: "Observation",
+                        id: "obs1",
+                        status: "final",
+                        code: {
+                            coding: [loincCoding, snomedCoding],
+                        },
+                    },
+                },
+            ],
+        };
+        let sdk;
+        beforeAll(async () => {
+            sdk = await index_1.FhirBundleSdk.create(bundle);
+        });
+        describe("System checking methods", () => {
+            it("should correctly identify LOINC coding", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs).toBeDefined();
+                expect(obs?.code?.coding).toBeDefined();
+                const coding = obs.code.coding[0];
+                expect(coding).toBeDefined();
+                expect(coding.isLoinc()).toBe(true);
+                expect(coding.isIcd10()).toBe(false);
+                expect(coding.isSnomed()).toBe(false);
+                expect(coding.isRxNorm()).toBe(false);
+                expect(coding.isNdc()).toBe(false);
+            });
+            it("should correctly identify SNOMED coding", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs).toBeDefined();
+                expect(obs?.code?.coding).toBeDefined();
+                const coding = obs.code.coding[1];
+                expect(coding).toBeDefined();
+                expect(coding.isSnomed()).toBe(true);
+                expect(coding.isLoinc()).toBe(false);
+            });
+        });
+        describe("Code matching methods", () => {
+            it("should match specific code", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs).toBeDefined();
+                expect(obs?.code?.coding).toBeDefined();
+                const coding = obs.code.coding[0];
+                expect(coding).toBeDefined();
+                expect(coding.matchesCode("8867-4")).toBe(true);
+                expect(coding.matchesCode("wrong-code")).toBe(false);
+            });
+            it("should match codes from array", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs).toBeDefined();
+                expect(obs?.code?.coding).toBeDefined();
+                const coding = obs.code.coding[0];
+                expect(coding).toBeDefined();
+                expect(coding.matchesCodes(["8867-4", "other-code"])).toBe(true);
+                expect(coding.matchesCodes(["wrong-1", "wrong-2"])).toBe(false);
+            });
+        });
+    });
+    describe("SmartCodeableConcept - CodeableConcept Methods", () => {
+        const bundle = {
+            resourceType: "Bundle",
+            type: "collection",
+            entry: [
+                {
+                    resource: {
+                        resourceType: "Condition",
+                        id: "cond1",
+                        subject: { reference: "Patient/1" },
+                        code: {
+                            coding: [
+                                {
+                                    system: "http://hl7.org/fhir/sid/icd-10-cm",
+                                    code: "E11.9",
+                                    display: "Type 2 diabetes mellitus",
+                                },
+                                {
+                                    system: "http://snomed.info/sct",
+                                    code: "73211009",
+                                    display: "Diabetes mellitus",
+                                },
+                            ],
+                            text: "Type 2 Diabetes",
+                        },
+                    },
+                },
+                {
+                    resource: {
+                        resourceType: "Observation",
+                        id: "obs1",
+                        status: "final",
+                        code: {
+                            coding: [
+                                {
+                                    system: "http://loinc.org",
+                                    code: "8867-4",
+                                    display: "Heart rate",
+                                },
+                                {
+                                    system: "http://loinc.org",
+                                    code: "8310-5",
+                                    display: "Body temperature",
+                                },
+                            ],
+                        },
+                    },
+                },
+                {
+                    resource: {
+                        resourceType: "Observation",
+                        id: "obs2",
+                        status: "final",
+                        code: {
+                            text: "No coding array",
+                        },
+                    },
+                },
+            ],
+        };
+        let sdk;
+        beforeAll(async () => {
+            sdk = await index_1.FhirBundleSdk.create(bundle);
+        });
+        describe("LOINC methods", () => {
+            it("should get first LOINC coding", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                const loinc = obs.code.getLoinc();
+                expect(loinc).toBeDefined();
+                expect(loinc.code).toBe("8867-4");
+            });
+            it("should get all LOINC codings", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                const loincCodings = obs.code.getLoincCodings();
+                expect(loincCodings).toHaveLength(2);
+                expect(loincCodings[0].code).toBe("8867-4");
+                expect(loincCodings[1].code).toBe("8310-5");
+            });
+            it("should get first LOINC code value", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                const code = obs.code.getLoincCode();
+                expect(code).toBe("8867-4");
+            });
+            it("should get all LOINC code values", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                const codes = obs.code.getLoincCodes();
+                expect(codes).toEqual(["8867-4", "8310-5"]);
+            });
+            it("should check if has any LOINC", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                expect(obs.code.hasLoinc()).toBe(true);
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                expect(cond.code.hasLoinc()).toBe(false);
+            });
+            it("should check if has specific LOINC code", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                expect(obs.code.hasLoincCode("8867-4")).toBe(true);
+                expect(obs.code.hasLoincCode("wrong-code")).toBe(false);
+            });
+            it("should check if has some LOINC codes", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                expect(obs.code.hasSomeLoinc(["8867-4", "other"])).toBe(true);
+                expect(obs.code.hasSomeLoinc(["8310-5", "other"])).toBe(true);
+                expect(obs.code.hasSomeLoinc(["wrong-1", "wrong-2"])).toBe(false);
+            });
+            it("should find LOINC coding with predicate", () => {
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                const found = obs.code.findLoincCoding((code) => code === "8310-5");
+                expect(found).toBeDefined();
+                expect(found.code).toBe("8310-5");
+                const notFound = obs.code.findLoincCoding((code) => code === "wrong");
+                expect(notFound).toBeUndefined();
+            });
+        });
+        describe("ICD-10 methods", () => {
+            it("should get first ICD-10 coding", () => {
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                const icd10 = cond.code.getIcd10();
+                expect(icd10).toBeDefined();
+                expect(icd10.code).toBe("E11.9");
+            });
+            it("should get all ICD-10 codings", () => {
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                const icd10Codings = cond.code.getIcd10Codings();
+                expect(icd10Codings).toHaveLength(1);
+                expect(icd10Codings[0].code).toBe("E11.9");
+            });
+            it("should check if has ICD-10", () => {
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                expect(cond.code.hasIcd10()).toBe(true);
+                const obs = sdk.getObservationById("obs1");
+                expect(obs?.code).toBeDefined();
+                expect(obs.code.hasIcd10()).toBe(false);
+            });
+            it("should check if has specific ICD-10 code", () => {
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                expect(cond.code.hasIcd10Code("E11.9")).toBe(true);
+                expect(cond.code.hasIcd10Code("wrong")).toBe(false);
+            });
+            it("should check if has some ICD-10 codes", () => {
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                expect(cond.code.hasSomeIcd10(["E11.9", "other"])).toBe(true);
+                expect(cond.code.hasSomeIcd10(["wrong-1", "wrong-2"])).toBe(false);
+            });
+        });
+        describe("SNOMED methods", () => {
+            it("should get first SNOMED coding", () => {
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                const snomed = cond.code.getSnomed();
+                expect(snomed).toBeDefined();
+                expect(snomed.code).toBe("73211009");
+            });
+            it("should check if has SNOMED", () => {
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                expect(cond.code.hasSnomed()).toBe(true);
+            });
+            it("should check if has specific SNOMED code", () => {
+                const cond = sdk.getConditionById("cond1");
+                expect(cond?.code).toBeDefined();
+                expect(cond.code.hasSnomedCode("73211009")).toBe(true);
+                expect(cond.code.hasSnomedCode("wrong")).toBe(false);
+            });
+        });
+        describe("Edge cases", () => {
+            it("should handle undefined coding array", () => {
+                const obs = sdk.getObservationById("obs2");
+                expect(obs?.code).toBeDefined();
+                expect(obs.code.getLoinc()).toBeUndefined();
+                expect(obs.code.getLoincCodings()).toEqual([]);
+                expect(obs.code.getLoincCode()).toBeUndefined();
+                expect(obs.code.getLoincCodes()).toEqual([]);
+                expect(obs.code.hasLoinc()).toBe(false);
+                expect(obs.code.hasLoincCode("any")).toBe(false);
+                expect(obs.code.hasSomeLoinc(["any"])).toBe(false);
+            });
+            it("should handle empty coding array", () => {
+                const emptyBundle = {
+                    resourceType: "Bundle",
+                    type: "collection",
+                    entry: [
+                        {
+                            resource: {
+                                resourceType: "Observation",
+                                id: "obs-empty",
+                                status: "final",
+                                code: {
+                                    coding: [],
+                                    text: "Empty codings",
+                                },
+                            },
+                        },
+                    ],
+                };
+                const emptySdk = index_1.FhirBundleSdk.createSync(emptyBundle);
+                const obs = emptySdk.getObservationById("obs-empty");
+                expect(obs?.code).toBeDefined();
+                expect(obs.code.hasLoinc()).toBe(false);
+            });
+        });
+    });
+    describe("Deep nesting - Transparent Proxy", () => {
+        const bundle = {
+            resourceType: "Bundle",
+            type: "collection",
+            entry: [
+                {
+                    resource: {
+                        resourceType: "Observation",
+                        id: "obs1",
+                        status: "final",
+                        code: {
+                            coding: [
+                                {
+                                    system: "http://loinc.org",
+                                    code: "8867-4",
+                                    display: "Heart rate",
+                                },
+                            ],
+                        },
+                        component: [
+                            {
+                                code: {
+                                    coding: [
+                                        {
+                                            system: "http://loinc.org",
+                                            code: "8310-5",
+                                            display: "Body temperature",
+                                        },
+                                    ],
+                                },
+                            },
+                        ],
+                    },
+                },
+            ],
+        };
+        let sdk;
+        beforeAll(async () => {
+            sdk = await index_1.FhirBundleSdk.create(bundle);
+        });
+        it("should wrap CodeableConcept in nested component arrays", () => {
+            const obs = sdk.getObservationById("obs1");
+            expect(obs?.component).toBeDefined();
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any
+            const component = obs.component[0];
+            expect(component?.code).toBeDefined();
+            // Should have smart methods on nested CodeableConcept
+            expect(component.code.hasLoinc()).toBe(true);
+            expect(component.code.hasLoincCode("8310-5")).toBe(true);
+        });
+        it("should wrap Coding in deeply nested structures", () => {
+            const obs = sdk.getObservationById("obs1");
+            expect(obs?.component).toBeDefined();
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any
+            const component = obs.component[0];
+            expect(component?.code?.coding).toBeDefined();
+            const componentCoding = component.code.coding[0];
+            expect(componentCoding).toBeDefined();
+            // Should have smart methods on nested Coding
+            expect(componentCoding.isLoinc()).toBe(true);
+            expect(componentCoding.matchesCode("8310-5")).toBe(true);
+        });
+    });
+    describe("Integration - Filtering by coding", () => {
+        const bundle = {
+            resourceType: "Bundle",
+            type: "collection",
+            entry: [
+                {
+                    resource: {
+                        resourceType: "Observation",
+                        id: "obs1",
+                        status: "final",
+                        code: {
+                            coding: [
+                                {
+                                    system: "http://loinc.org",
+                                    code: "8867-4",
+                                    display: "Heart rate",
+                                },
+                            ],
+                        },
+                    },
+                },
+                {
+                    resource: {
+                        resourceType: "Observation",
+                        id: "obs2",
+                        status: "final",
+                        code: {
+                            coding: [
+                                {
+                                    system: "http://loinc.org",
+                                    code: "8310-5",
+                                    display: "Body temperature",
+                                },
+                            ],
+                        },
+                    },
+                },
+                {
+                    resource: {
+                        resourceType: "Observation",
+                        id: "obs3",
+                        status: "final",
+                        code: {
+                            coding: [
+                                {
+                                    system: "http://snomed.info/sct",
+                                    code: "271649006",
+                                    display: "Systolic blood pressure",
+                                },
+                            ],
+                        },
+                    },
+                },
+            ],
+        };
+        let sdk;
+        beforeAll(async () => {
+            sdk = await index_1.FhirBundleSdk.create(bundle);
+        });
+        it("should filter observations by LOINC codes", () => {
+            const vitals = sdk
+                .getObservations()
+                .filter(obs => obs.code?.hasSomeLoinc(["8867-4", "8310-5"]) ?? false);
+            expect(vitals).toHaveLength(2);
+            expect(vitals[0]?.id).toBe("obs1");
+            expect(vitals[1]?.id).toBe("obs2");
+        });
+        it("should filter observations by specific coding system", () => {
+            const loincObs = sdk.getObservations().filter(obs => obs.code?.hasLoinc() ?? false);
+            expect(loincObs).toHaveLength(2);
+            const snomedObs = sdk.getObservations().filter(obs => obs.code?.hasSnomed() ?? false);
+            expect(snomedObs).toHaveLength(1);
+            expect(snomedObs[0]?.id).toBe("obs3");
+        });
+        it("should filter and map to extract codes", () => {
+            const loincCodes = sdk
+                .getObservations()
+                .filter(obs => obs.code?.hasLoinc() ?? false)
+                .map(obs => obs.code.getLoincCode())
+                .filter((code) => code !== undefined);
+            expect(loincCodes).toEqual(["8867-4", "8310-5"]);
+        });
+    });
+});
+//# sourceMappingURL=coding-utilities.test.js.map

package/dist/__tests__/coding-utilities.test.js.map

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package/dist/__tests__/type-guards.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=type-guards.test.d.ts.map

package/dist/__tests__/type-guards.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"type-guards.test.d.ts","sourceRoot":"","sources":["../../src/__tests__/type-guards.test.ts"],"names":[],"mappings":""}

package/dist/__tests__/type-guards.test.js

@@ -0,0 +1,163 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+const fhir_bundle_sdk_1 = require("../fhir-bundle-sdk");
+const type_guards_1 = require("../type-guards");
+describe("Type Guards", () => {
+    describe("Basic type narrowing with mixed resource arrays", () => {
+        test("filters mixed Resource array to specific type with proper inference", () => {
+            const resources = [
+                { resourceType: "Patient", id: "patient-1" },
+                { resourceType: "Observation", id: "obs-1", status: "final", code: { text: "test" } },
+                { resourceType: "Patient", id: "patient-2" },
+                {
+                    resourceType: "DiagnosticReport",
+                    id: "report-1",
+                    status: "final",
+                    code: { text: "test" },
+                },
+                { resourceType: "Observation", id: "obs-2", status: "final", code: { text: "test" } },
+            ];
+            const patients = resources.filter(type_guards_1.isPatient);
+            const observations = resources.filter(type_guards_1.isObservation);
+            const reports = resources.filter(type_guards_1.isDiagnosticReport);
+            // Type assertions validate TypeScript properly inferred the types
+            expect(patients).toHaveLength(2);
+            expect(observations).toHaveLength(2);
+            expect(reports).toHaveLength(1);
+            // TypeScript knows these are Patients, so we can access Patient-specific fields
+            patients.forEach(patient => {
+                expect(patient.resourceType).toBe("Patient");
+                // This wouldn't compile if TypeScript didn't narrow the type
+                void patient.name; // Patient-specific field accessible due to type narrowing
+            });
+            // TypeScript knows these are Observations
+            observations.forEach(obs => {
+                expect(obs.resourceType).toBe("Observation");
+                expect(obs.status).toBe("final"); // Observation-specific field accessible
+            });
+        });
+    });
+    describe("Type guards with Smart resources", () => {
+        test("filters Smart resources with proper type inference", async () => {
+            const bundle = {
+                resourceType: "Bundle",
+                type: "collection",
+                entry: [
+                    { resource: { resourceType: "Patient", id: "patient-1" } },
+                    {
+                        resource: {
+                            resourceType: "Observation",
+                            id: "obs-1",
+                            status: "final",
+                            code: { text: "test" },
+                            subject: { reference: "Patient/patient-1" },
+                        },
+                    },
+                    { resource: { resourceType: "Patient", id: "patient-2" } },
+                    {
+                        resource: {
+                            resourceType: "Encounter",
+                            id: "enc-1",
+                            status: "finished",
+                            class: { code: "test" },
+                        },
+                    },
+                    {
+                        resource: {
+                            resourceType: "Observation",
+                            id: "obs-2",
+                            status: "final",
+                            code: { text: "test" },
+                        },
+                    },
+                ],
+            };
+            const sdk = await fhir_bundle_sdk_1.FhirBundleSdk.create(bundle);
+            // Test filtering observations directly - this is the main use case
+            const allObservations = sdk.getObservations();
+            expect(allObservations).toHaveLength(2);
+            allObservations.forEach(obs => {
+                expect(obs.resourceType).toBe("Observation");
+                expect(obs.__isSmartResource).toBe(true);
+                // Type guard confirms it's an Observation, so we can access observation-specific fields
+                if ((0, type_guards_1.isObservation)(obs)) {
+                    const subject = obs.getSubject();
+                    void subject;
+                }
+            });
+            // Test filtering patients
+            const allPatients = sdk.getPatients();
+            expect(allPatients).toHaveLength(2);
+            allPatients.forEach(patient => {
+                expect(patient.resourceType).toBe("Patient");
+                expect(patient.__isSmartResource).toBe(true);
+            });
+        });
+        test("type guards work in conditional blocks with Smart resources", async () => {
+            const bundle = {
+                resourceType: "Bundle",
+                type: "collection",
+                entry: [
+                    {
+                        resource: {
+                            resourceType: "Patient",
+                            id: "patient-1",
+                            name: [{ given: ["Jane"], family: "Doe" }],
+                        },
+                    },
+                    {
+                        resource: {
+                            resourceType: "Observation",
+                            id: "obs-1",
+                            status: "final",
+                            code: { text: "test" },
+                            valueQuantity: { value: 120, unit: "mmHg" },
+                        },
+                    },
+                ],
+            };
+            const sdk = await fhir_bundle_sdk_1.FhirBundleSdk.create(bundle);
+            const resource1 = sdk.getResourceById("patient-1");
+            const resource2 = sdk.getResourceById("obs-1");
+            // Type guard in conditional - TypeScript should narrow the type
+            if (resource1 && (0, type_guards_1.isPatient)(resource1)) {
+                expect(resource1.resourceType).toBe("Patient");
+                const name = resource1.name?.[0]?.given?.[0];
+                expect(name).toBe("Jane");
+            }
+            if (resource2 && (0, type_guards_1.isObservation)(resource2)) {
+                expect(resource2.resourceType).toBe("Observation");
+                const value = resource2.valueQuantity?.value;
+                expect(value).toBe(120);
+            }
+        });
+    });
+    describe("Edge cases", () => {
+        test("handles undefined gracefully", () => {
+            expect((0, type_guards_1.isPatient)(undefined)).toBe(false);
+            expect((0, type_guards_1.isObservation)(undefined)).toBe(false);
+            expect((0, type_guards_1.isDiagnosticReport)(undefined)).toBe(false);
+        });
+        test("filters out undefined values from array", () => {
+            const resources = [
+                { resourceType: "Patient", id: "1" },
+                undefined,
+                { resourceType: "Observation", id: "2", status: "final", code: { text: "test" } },
+                undefined,
+            ];
+            const patients = resources.filter(type_guards_1.isPatient);
+            const observations = resources.filter(type_guards_1.isObservation);
+            expect(patients).toHaveLength(1);
+            expect(observations).toHaveLength(1);
+        });
+        test("returns empty array when no matches found", () => {
+            const resources = [
+                { resourceType: "Patient", id: "1" },
+                { resourceType: "Patient", id: "2" },
+            ];
+            const observations = resources.filter(type_guards_1.isObservation);
+            expect(observations).toHaveLength(0);
+        });
+    });
+});
+//# sourceMappingURL=type-guards.test.js.map

package/dist/__tests__/type-guards.test.js.map

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