@metriport/fhir-sdk 0.30.0-alpha.1

package/dist/__tests__/reverse-references.test.js

@@ -0,0 +1,294 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+/* eslint-disable @typescript-eslint/no-explicit-any */
+const index_1 = require("../index");
+const fhir_bundles_1 = require("./fixtures/fhir-bundles");
+describe("Reverse References", () => {
+    describe("getResourcesReferencingId - basic functionality", () => {
+        it("should return all resources that reference a given resource ID", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // patient-123 is referenced by:
+            // - encounter-789 (subject)
+            // - observation-001 (subject)
+            // - diagnostic-report-002 (subject)
+            const referencingResources = sdk.getResourcesReferencingId("patient-123");
+            expect(referencingResources).toHaveLength(4);
+            const resourceTypes = referencingResources.map(r => r.resourceType).sort();
+            expect(resourceTypes).toEqual(["Condition", "DiagnosticReport", "Encounter", "Observation"]);
+        });
+        it("should return empty array when no resources reference the given ID", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const referencingResources = sdk.getResourcesReferencingId("nonexistent-id");
+            expect(referencingResources).toEqual([]);
+        });
+        it("should handle resources referenced by multiple other resources", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // encounter-789 is referenced by:
+            // - observation-001 (encounter)
+            // - diagnostic-report-002 (encounter)
+            const referencingResources = sdk.getResourcesReferencingId("encounter-789");
+            expect(referencingResources).toHaveLength(2);
+            expect(referencingResources.every(r => r.resourceType === "Observation" || r.resourceType === "DiagnosticReport")).toBe(true);
+        });
+        it("should handle resources referenced by array fields", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // practitioner-456 is referenced by:
+            // - encounter-789 (participant array)
+            // - observation-001 (performer array)
+            // - diagnostic-report-002 (performer array)
+            const referencingResources = sdk.getResourcesReferencingId("practitioner-456");
+            expect(referencingResources).toHaveLength(3);
+        });
+    });
+    describe("getResourcesReferencingId - filtering by resource type", () => {
+        it("should filter by source resource type", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // Get only Observations that reference patient-123
+            const observations = sdk.getResourcesReferencingId("patient-123", {
+                resourceType: "Observation",
+            });
+            expect(observations).toHaveLength(1);
+            expect(observations[0]?.resourceType).toBe("Observation");
+            expect(observations[0]?.id).toBe("observation-001");
+        });
+        it("should return empty array when filtering by type with no matches", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // No Practitioners reference patient-123
+            const practitioners = sdk.getResourcesReferencingId("patient-123", {
+                resourceType: "Practitioner",
+            });
+            expect(practitioners).toEqual([]);
+        });
+        it("should handle multiple resources of same type referencing target", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.mixedResourceTypesBundle);
+            // patient-mix-1 is referenced by observation-mix-1 and observation-mix-2
+            const observations = sdk.getResourcesReferencingId("patient-mix-1", {
+                resourceType: "Observation",
+            });
+            expect(observations).toHaveLength(2);
+            expect(observations.every(o => o.resourceType === "Observation")).toBe(true);
+        });
+    });
+    describe("getResourcesReferencingId - filtering by reference field", () => {
+        it("should filter by specific reference field", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // Get only resources that reference patient-123 via "subject" field
+            const subjectReferences = sdk.getResourcesReferencingId("patient-123", {
+                referenceField: "subject",
+            });
+            expect(subjectReferences).toHaveLength(4);
+            expect(subjectReferences.every(r => {
+                const resource = r;
+                return resource.subject?.reference?.includes("patient-123");
+            })).toBe(true);
+        });
+        it("should filter by nested reference field", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // Get only resources that reference practitioner-456 via "performer" field
+            const performerReferences = sdk.getResourcesReferencingId("practitioner-456", {
+                referenceField: "performer",
+            });
+            expect(performerReferences.length).toBeGreaterThan(0);
+        });
+        it("should return empty array when field does not match", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // No resources reference patient-123 via "performer" field
+            const performerReferences = sdk.getResourcesReferencingId("patient-123", {
+                referenceField: "performer",
+            });
+            expect(performerReferences).toEqual([]);
+        });
+    });
+    describe("getResourcesReferencingId - combined filters", () => {
+        it("should apply both resourceType and referenceField filters", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            // Get only Observations that reference patient-123 via "subject"
+            const observations = sdk.getResourcesReferencingId("patient-123", {
+                resourceType: "Observation",
+                referenceField: "subject",
+            });
+            expect(observations).toHaveLength(1);
+            expect(observations[0]?.resourceType).toBe("Observation");
+            expect(observations[0]?.id).toBe("observation-001");
+        });
+    });
+    describe("Smart resource getReferencingResources method", () => {
+        it("should expose getReferencingResources on smart resources", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const patient = sdk.getPatientById("patient-123");
+            expect(patient).toBeDefined();
+            expect(typeof patient.getReferencingResources).toBe("function");
+        });
+        it("should return all resources referencing the smart resource", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const patient = sdk.getPatientById("patient-123");
+            const referencingResources = patient.getReferencingResources();
+            expect(referencingResources).toHaveLength(4);
+            const resourceTypes = referencingResources.map((r) => r.resourceType).sort();
+            expect(resourceTypes).toEqual(["Condition", "DiagnosticReport", "Encounter", "Observation"]);
+        });
+        it("should support filtering options on smart resource method", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const patient = sdk.getPatientById("patient-123");
+            const observations = patient.getReferencingResources({
+                resourceType: "Observation",
+            });
+            expect(observations).toHaveLength(1);
+            expect(observations[0].resourceType).toBe("Observation");
+        });
+        it("should support referenceField filtering on smart resource method", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const patient = sdk.getPatientById("patient-123");
+            const subjectReferences = patient.getReferencingResources({
+                referenceField: "subject",
+            });
+            expect(subjectReferences).toHaveLength(4);
+        });
+        it("should return empty array when smart resource is not referenced", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const practitioner = sdk.getPractitionerById("practitioner-456");
+            // Check if the method exists and returns an array
+            const pracReferences = practitioner.getReferencingResources();
+            expect(Array.isArray(pracReferences)).toBe(true);
+        });
+        it("should work with resources that have no ID", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const observation = sdk.getObservationById("observation-001");
+            const referencingResources = observation.getReferencingResources();
+            // observation-001 is referenced by diagnostic-report-002 in the "result" field
+            expect(referencingResources).toHaveLength(1);
+            expect(referencingResources[0].resourceType).toBe("DiagnosticReport");
+        });
+    });
+    describe("Edge cases", () => {
+        it("should handle bundle with no references", async () => {
+            const bundle = {
+                resourceType: "Bundle",
+                type: "collection",
+                entry: [
+                    {
+                        resource: {
+                            resourceType: "Patient",
+                            id: "patient-solo",
+                            name: [{ family: "Solo" }],
+                        },
+                    },
+                ],
+            };
+            const sdk = await index_1.FhirBundleSdk.create(bundle);
+            const referencingResources = sdk.getResourcesReferencingId("patient-solo");
+            expect(referencingResources).toEqual([]);
+        });
+        it("should handle resources with fullUrl references", async () => {
+            const bundle = {
+                resourceType: "Bundle",
+                type: "collection",
+                entry: [
+                    {
+                        fullUrl: "urn:uuid:patient-fullurl-test",
+                        resource: {
+                            resourceType: "Patient",
+                            id: "patient-fullurl-test",
+                            name: [{ family: "FullUrl" }],
+                        },
+                    },
+                    {
+                        resource: {
+                            resourceType: "Observation",
+                            id: "observation-fullurl-test",
+                            status: "final",
+                            code: { text: "Test" },
+                            subject: {
+                                reference: "urn:uuid:patient-fullurl-test",
+                            },
+                        },
+                    },
+                ],
+            };
+            const sdk = await index_1.FhirBundleSdk.create(bundle);
+            // Should work with resource ID
+            const referencingById = sdk.getResourcesReferencingId("patient-fullurl-test");
+            expect(referencingById).toHaveLength(1);
+            // Should also work with fullUrl
+            const referencingByFullUrl = sdk.getResourcesReferencingId("urn:uuid:patient-fullurl-test");
+            expect(referencingByFullUrl).toHaveLength(1);
+        });
+        it("should return smart resources from reverse lookup", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const referencingResources = sdk.getResourcesReferencingId("patient-123");
+            // Check that returned resources are smart resources
+            expect(referencingResources.length).toBeGreaterThan(0);
+            expect(referencingResources[0].__isSmartResource).toBe(true);
+        });
+    });
+    describe("Performance", () => {
+        it("should perform reverse lookup in constant time", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const iterations = 100;
+            const times = [];
+            for (let i = 0; i < iterations; i++) {
+                const start = performance.now();
+                sdk.getResourcesReferencingId("patient-123");
+                const end = performance.now();
+                times.push(end - start);
+            }
+            const avgTime = times.reduce((a, b) => a + b) / times.length;
+            // Should be extremely fast (under 1ms on average)
+            expect(avgTime).toBeLessThan(1);
+        });
+    });
+    describe("getReferencedResources - forward reference lookup", () => {
+        it("should expose getReferencedResources on smart resources", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const observation = sdk.getObservationById("observation-001");
+            expect(observation).toBeDefined();
+            expect(typeof observation.getReferencedResources).toBe("function");
+        });
+        it("should return all resources referenced by a resource", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const observation = sdk.getObservationById("observation-001");
+            const referencedResources = observation.getReferencedResources();
+            // observation-001 references:
+            // - patient-123 (subject)
+            // - encounter-789 (encounter)
+            // - practitioner-456 (performer)
+            expect(referencedResources.length).toBeGreaterThan(0);
+            const resourceTypes = new Set(referencedResources.map((r) => r.resourceType));
+            expect(resourceTypes.has("Patient")).toBe(true);
+        });
+        it("should return empty array for resources with no references", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const patient = sdk.getPatientById("patient-123");
+            const referencedResources = patient.getReferencedResources();
+            // Patient may have no outgoing references or very few
+            expect(Array.isArray(referencedResources)).toBe(true);
+        });
+        it("should work with SDK-level method getResourcesReferencedBy", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const observation = sdk.getObservationById("observation-001");
+            expect(observation).toBeDefined();
+            if (!observation) {
+                throw new Error("Observation not found");
+            }
+            const referencedResources = sdk.getResourcesReferencedBy(observation);
+            expect(Array.isArray(referencedResources)).toBe(true);
+            expect(referencedResources.length).toBeGreaterThan(0);
+        });
+        it("should handle array reference fields", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const diagnosticReport = sdk.getDiagnosticReportById("diagnostic-report-002");
+            const referencedResources = diagnosticReport.getReferencedResources();
+            // DiagnosticReport references multiple resources including results array
+            expect(Array.isArray(referencedResources)).toBe(true);
+            expect(referencedResources.length).toBeGreaterThan(0);
+        });
+        it("should not include undefined values", async () => {
+            const sdk = await index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle);
+            const observation = sdk.getObservationById("observation-001");
+            const referencedResources = observation.getReferencedResources();
+            // All returned resources should be defined
+            expect(referencedResources.every((r) => r !== undefined)).toBe(true);
+        });
+    });
+});
+//# sourceMappingURL=reverse-references.test.js.map

package/dist/__tests__/reverse-references.test.js.map

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package/dist/__tests__/type-guards.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=type-guards.test.d.ts.map

package/dist/__tests__/type-guards.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"type-guards.test.d.ts","sourceRoot":"","sources":["../../src/__tests__/type-guards.test.ts"],"names":[],"mappings":""}

package/dist/__tests__/type-guards.test.js

@@ -0,0 +1,163 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+const fhir_bundle_sdk_1 = require("../fhir-bundle-sdk");
+const type_guards_1 = require("../type-guards");
+describe("Type Guards", () => {
+    describe("Basic type narrowing with mixed resource arrays", () => {
+        test("filters mixed Resource array to specific type with proper inference", () => {
+            const resources = [
+                { resourceType: "Patient", id: "patient-1" },
+                { resourceType: "Observation", id: "obs-1", status: "final", code: { text: "test" } },
+                { resourceType: "Patient", id: "patient-2" },
+                {
+                    resourceType: "DiagnosticReport",
+                    id: "report-1",
+                    status: "final",
+                    code: { text: "test" },
+                },
+                { resourceType: "Observation", id: "obs-2", status: "final", code: { text: "test" } },
+            ];
+            const patients = resources.filter(type_guards_1.isPatient);
+            const observations = resources.filter(type_guards_1.isObservation);
+            const reports = resources.filter(type_guards_1.isDiagnosticReport);
+            // Type assertions validate TypeScript properly inferred the types
+            expect(patients).toHaveLength(2);
+            expect(observations).toHaveLength(2);
+            expect(reports).toHaveLength(1);
+            // TypeScript knows these are Patients, so we can access Patient-specific fields
+            patients.forEach(patient => {
+                expect(patient.resourceType).toBe("Patient");
+                // This wouldn't compile if TypeScript didn't narrow the type
+                void patient.name; // Patient-specific field accessible due to type narrowing
+            });
+            // TypeScript knows these are Observations
+            observations.forEach(obs => {
+                expect(obs.resourceType).toBe("Observation");
+                expect(obs.status).toBe("final"); // Observation-specific field accessible
+            });
+        });
+    });
+    describe("Type guards with Smart resources", () => {
+        test("filters Smart resources with proper type inference", async () => {
+            const bundle = {
+                resourceType: "Bundle",
+                type: "collection",
+                entry: [
+                    { resource: { resourceType: "Patient", id: "patient-1" } },
+                    {
+                        resource: {
+                            resourceType: "Observation",
+                            id: "obs-1",
+                            status: "final",
+                            code: { text: "test" },
+                            subject: { reference: "Patient/patient-1" },
+                        },
+                    },
+                    { resource: { resourceType: "Patient", id: "patient-2" } },
+                    {
+                        resource: {
+                            resourceType: "Encounter",
+                            id: "enc-1",
+                            status: "finished",
+                            class: { code: "test" },
+                        },
+                    },
+                    {
+                        resource: {
+                            resourceType: "Observation",
+                            id: "obs-2",
+                            status: "final",
+                            code: { text: "test" },
+                        },
+                    },
+                ],
+            };
+            const sdk = await fhir_bundle_sdk_1.FhirBundleSdk.create(bundle);
+            // Test filtering observations directly - this is the main use case
+            const allObservations = sdk.getObservations();
+            expect(allObservations).toHaveLength(2);
+            allObservations.forEach(obs => {
+                expect(obs.resourceType).toBe("Observation");
+                expect(obs.__isSmartResource).toBe(true);
+                // Type guard confirms it's an Observation, so we can access observation-specific fields
+                if ((0, type_guards_1.isObservation)(obs)) {
+                    const subject = obs.getSubject();
+                    void subject;
+                }
+            });
+            // Test filtering patients
+            const allPatients = sdk.getPatients();
+            expect(allPatients).toHaveLength(2);
+            allPatients.forEach(patient => {
+                expect(patient.resourceType).toBe("Patient");
+                expect(patient.__isSmartResource).toBe(true);
+            });
+        });
+        test("type guards work in conditional blocks with Smart resources", async () => {
+            const bundle = {
+                resourceType: "Bundle",
+                type: "collection",
+                entry: [
+                    {
+                        resource: {
+                            resourceType: "Patient",
+                            id: "patient-1",
+                            name: [{ given: ["Jane"], family: "Doe" }],
+                        },
+                    },
+                    {
+                        resource: {
+                            resourceType: "Observation",
+                            id: "obs-1",
+                            status: "final",
+                            code: { text: "test" },
+                            valueQuantity: { value: 120, unit: "mmHg" },
+                        },
+                    },
+                ],
+            };
+            const sdk = await fhir_bundle_sdk_1.FhirBundleSdk.create(bundle);
+            const resource1 = sdk.getResourceById("patient-1");
+            const resource2 = sdk.getResourceById("obs-1");
+            // Type guard in conditional - TypeScript should narrow the type
+            if (resource1 && (0, type_guards_1.isPatient)(resource1)) {
+                expect(resource1.resourceType).toBe("Patient");
+                const name = resource1.name?.[0]?.given?.[0];
+                expect(name).toBe("Jane");
+            }
+            if (resource2 && (0, type_guards_1.isObservation)(resource2)) {
+                expect(resource2.resourceType).toBe("Observation");
+                const value = resource2.valueQuantity?.value;
+                expect(value).toBe(120);
+            }
+        });
+    });
+    describe("Edge cases", () => {
+        test("handles undefined gracefully", () => {
+            expect((0, type_guards_1.isPatient)(undefined)).toBe(false);
+            expect((0, type_guards_1.isObservation)(undefined)).toBe(false);
+            expect((0, type_guards_1.isDiagnosticReport)(undefined)).toBe(false);
+        });
+        test("filters out undefined values from array", () => {
+            const resources = [
+                { resourceType: "Patient", id: "1" },
+                undefined,
+                { resourceType: "Observation", id: "2", status: "final", code: { text: "test" } },
+                undefined,
+            ];
+            const patients = resources.filter(type_guards_1.isPatient);
+            const observations = resources.filter(type_guards_1.isObservation);
+            expect(patients).toHaveLength(1);
+            expect(observations).toHaveLength(1);
+        });
+        test("returns empty array when no matches found", () => {
+            const resources = [
+                { resourceType: "Patient", id: "1" },
+                { resourceType: "Patient", id: "2" },
+            ];
+            const observations = resources.filter(type_guards_1.isObservation);
+            expect(observations).toHaveLength(0);
+        });
+    });
+});
+//# sourceMappingURL=type-guards.test.js.map

package/dist/__tests__/type-guards.test.js.map

@@ -0,0 +1 @@
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package/dist/clinical-dates.d.ts

@@ -0,0 +1,26 @@
+import { Resource } from "@medplum/fhirtypes";
+/**
+ * Date range extracted from a FHIR resource for use with searchByDateRange()
+ */
+export interface ResourceDateRange {
+    /** The start date in ISO format */
+    startDate: string;
+    /** The end date in ISO format (only present for period-based dates) */
+    endDate?: string;
+}
+/**
+ * Extract the primary clinical date range from a FHIR resource.
+ * Returns undefined if the resource has no clinical dates.
+ *
+ * The returned dates can be passed directly to searchByDateRange():
+ * @example
+ * const dateRange = getClinicalDateRange(myObservation);
+ * if (dateRange) {
+ *   bundle.searchByDateRange({
+ *     dateFrom: dateRange.startDate,
+ *     dateTo: dateRange.endDate
+ *   });
+ * }
+ */
+export declare function getClinicalDateRange(resource: Resource): ResourceDateRange | undefined;
+//# sourceMappingURL=clinical-dates.d.ts.map

package/dist/clinical-dates.d.ts.map

@@ -0,0 +1 @@
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