@medplum/fhir-router 5.1.36 → 5.1.37

package/dist/cjs/index.cjs

@@ -1,4 +1,4 @@
-"use strict";var ma=Object.create;var Vt=Object.defineProperty;var ha=Object.getOwnPropertyDescriptor;var ya=Object.getOwnPropertyNames;var Ta=Object.getPrototypeOf,ga=Object.prototype.hasOwnProperty;var Ea=(t,e,r)=>e in t?Vt(t,e,{enumerable:!0,configurable:!0,writable:!0,value:r}):t[e]=r;var Eo=(t,e)=>{for(var r in e)Vt(t,r,{get:e[r],enumerable:!0})},Io=(t,e,r,n)=>{if(e&&typeof e=="object"||typeof e=="function")for(let i of ya(e))!ga.call(t,i)&&i!==r&&Vt(t,i,{get:()=>e[i],enumerable:!(n=ha(e,i))||n.enumerable});return t};var No=(t,e,r)=>(r=t!=null?ma(Ta(t)):{},Io(e||!t||!t.__esModule?Vt(r,"default",{value:t,enumerable:!0}):r,t)),Ia=t=>Io(Vt({},"__esModule",{value:!0}),t);var $=(t,e,r)=>Ea(t,typeof e!="symbol"?e+"":e,r);var Ul={};Eo(Ul,{BatchProcessor:()=>$t,FhirRepository:()=>mn,FhirRouter:()=>ho,MAX_QUERY_STRING_LENGTH:()=>mo,MemoryRepository:()=>no,RepositoryMode:()=>fr,Router:()=>hr,buildBatchResponseBundle:()=>vo,createResourceImpl:()=>la,getExtraEntries:()=>ro,getSearchIncludeEntries:()=>Js,getSearchRevIncludeEntries:()=>Xs,makeSimpleRequest:()=>Vl,processBatch:()=>Tr,updateResourceImpl:()=>fa});module.exports=Ia(Ul);var R=require("@medplum/core");var Na=50,ba=8,va=/urn(:|%3A)uuid(:|%3A)[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}/;async function Tr(t,e,r,n){return new $t(r,e,n,t).run()}var $t=class t{constructor(e,r,n,i){$(this,"router");$(this,"repo");$(this,"bundle");$(this,"req");$(this,"resolvedIdentities");$(this,"bundleInfo");$(this,"state");this.router=e,this.repo=r,this.bundle=n,this.req=i,this.resolvedIdentities=Object.create(null),this.state={position:0,resultEntries:new Array(n.entry?.length??0),pendingIndices:[],errors:[]}}static fromState(e,r,n,i,o){let s=new t(e,r,i.bundle,n);return s.resolvedIdentities=i.resolvedIdentities,s.bundleInfo={...i.bundleInfo},s.state.position=o,s}async run(){await this.preprocess();let e=this.bundleInfo;if(!this.isTransaction())return this.processEntriesAndBuild();let r=bo(this.state);return this.repo.withTransaction(n=>this.withRepo(n,()=>(this.state=bo(r),this.processEntriesAndBuild())),{serializable:e.requiresStrongTransaction,resourceTypes:e.resourceTypes})}async preprocess(){let e=this.bundle.type;if(e!=="batch"&&e!=="transaction")throw new R.OperationOutcomeError((0,R.badRequest)("Unrecognized bundle type: "+e));if(this.bundleInfo=await this.preprocessBundle(),this.isTransaction()){if(this.bundleInfo.updates>Na)throw new R.OperationOutcomeError((0,R.badRequest)("Transaction contains more update operations than allowed"));if(this.bundleInfo.requiresStrongTransaction&&this.state.resultEntries.length>ba)throw new R.OperationOutcomeError((0,R.badRequest)("Transaction requires strict isolation but has too many entries"))}let r=Object.create(null);for(let n=0;n<this.state.resultEntries.length;n++)this.state.resultEntries[n]&&(r[n]=this.state.resultEntries[n]);return{bundle:this.bundle,bundleInfo:{ordering:this.bundleInfo.ordering,resourceTypes:this.bundleInfo.resourceTypes,requiresStrongTransaction:this.bundleInfo.requiresStrongTransaction,updates:this.bundleInfo.updates},resolvedIdentities:this.resolvedIdentities,preprocessResults:r}}hasMoreEntries(){return this.bundleInfo!==void 0&&this.state.position<this.bundleInfo.ordering.length}getPosition(){return this.state.position}takePendingResults(){if(this.state.pendingIndices.length===0)return;let e=Object.create(null);for(let r of this.state.pendingIndices)e[r]=this.state.resultEntries[r];return this.state.pendingIndices=[],e}async processEntriesAndBuild(){for(this.dispatchPreEvent();this.hasMoreEntries();)await this.processNextEntryImpl();return this.dispatchPostEvent(),this.buildResultBundle()}dispatchPreEvent(){let e={type:"batch",bundleType:this.bundle.type,count:this.bundle.entry?.length,size:JSON.stringify(this.bundle).length};this.router.dispatchEvent(e)}dispatchPostEvent(){let e={type:"batch",bundleType:this.bundle.type,errors:this.state.errors.length?this.state.errors:void 0};this.router.dispatchEvent(e)}buildResultBundle(){return{resourceType:"Bundle",type:`${this.bundle.type}-response`,entry:this.state.resultEntries}}async withRepo(e,r){let n=this.repo;this.repo=e;try{return await r()}finally{this.repo=n}}async preprocessBundle(){let e=this.bundle.entry;if(!e?.length)throw new R.OperationOutcomeError((0,R.badRequest)("Missing bundle entries"));let r={transaction:[],batch:[],delete:[],create:[],update:[],patch:[],operation:[],"search-system":[],"search-type":[],read:[],vread:[],"history-system":[],"history-type":[],"history-instance":[]},n=new Set,i=new Set,o=!1,s=0;for(let c=0;c<e.length;c++){let u=e[c];if(!u.request?.method){this.state.resultEntries[c]=Ut((0,R.badRequest)("Missing Bundle entry request method",`Bundle.entry[${c}].request.method`));continue}let f=await this.preprocessEntry(u,c,n);if(f){if(!this.isTransaction()){this.state.resultEntries[c]=Ut(f);continue}throw new R.OperationOutcomeError(f)}let m=this.getRouteForEntry(u),g=m?.data?.interaction;if(!g||!r[g])throw new R.OperationOutcomeError((0,R.badRequest)(`Invalid REST interaction in batch: ${u.request?.method} ${u.request?.url}`));let y=m?.params?.resourceType;y&&i.add(y),g==="create"&&u.request?.ifNoneExist?o=!0:g==="update"?(u.request?.url.includes("?")&&(o=!0),s++):g==="delete"&&u.request?.url.includes("?")&&(o=!0),r[g].push(c)}let a=[];for(let c of Object.values(r))a.push(...c);return{ordering:a,requiresStrongTransaction:o,updates:s,resourceTypes:i}}async preprocessEntry(e,r,n){if(!e.request?.url)return(0,R.badRequest)("Missing Bundle entry request URL",`Bundle.entry[${r}].request.url`);let i;try{i=await this.resolveIdentity(e,`Bundle.entry[${r}]`)}catch(o){if(o instanceof R.OperationOutcomeError)return o.outcome;throw o}if(i&&(this.resolvedIdentities[i.placeholder]=i.reference,this.isTransaction())){if(n.has(i.reference))throw new R.OperationOutcomeError((0,R.badRequest)("Duplicate resource identity found in Bundle"));n.add(i.reference)}}async resolveIdentity(e,r){let i=this.getRouteForEntry(e)?.data?.interaction;if(!i)throw new R.OperationOutcomeError(R.notFound);switch(i){case"create":return this.resolveCreateIdentity(e);case"delete":case"update":case"patch":return this.resolveModificationIdentity(e,r);default:return}}getRouteForEntry(e){return this.router.find(e.request?.method,e.request?.url??"")}async resolveCreateIdentity(e){let r=e.fullUrl??"";if(e.request?.ifNoneExist){let n=await this.repo.searchResources((0,R.parseSearchRequest)(e.request.url+"?"+e.request.ifNoneExist));if(n.length===1)return{placeholder:r,reference:(0,R.getReferenceString)(n[0])}}if(e.resource)return e.resource.id=this.repo.generateId(),{placeholder:r,reference:(0,R.getReferenceString)(e.resource)}}async resolveModificationIdentity(e,r){let n=e.fullUrl??"";if(e.request?.url?.includes("?")){let i=e.request.method,o=(0,R.parseSearchRequest)(e.request.url);o.count=2,o.offset=0,o.sortRules=void 0;let[s,a]=await this.repo.searchResources(o);if(!s)switch(i){case"DELETE":return;case"PUT":if(e.resource){if(e.resource.id)throw new R.OperationOutcomeError((0,R.badRequest)("Cannot provide ID for create by update"));return e.resource.id=this.repo.generateId(),{placeholder:n,reference:(0,R.getReferenceString)(e.resource)}}return;default:throw new R.OperationOutcomeError((0,R.badRequest)(`Conditional ${e.request.method} did not match any resources`,r+".request.url"))}if(a)throw new R.OperationOutcomeError((0,R.badRequest)(`Conditional ${e.request.method} matched multiple resources`,r+".request.url"));let c=(0,R.getReferenceString)(s);return e.request.url=c,e.resource&&(e.resource.id=s.id),{placeholder:n,reference:c}}if(e.request?.url.includes("/"))return{placeholder:n,reference:e.request.url}}async processNextEntry(){if(this.isTransaction())throw new Error("Re-entrant batch processing does not support transaction semantics");await this.processNextEntryImpl()}async processNextEntryImpl(){let e=this.bundleInfo;if(!e)throw new Error("processNextEntry called before preprocess()/fromState()");let r=this.bundle.entry;if(!r)throw new R.OperationOutcomeError((0,R.badRequest)("Missing bundle entry"));if(this.state.position>=e.ordering.length)return;let n=this.state.position,i=e.ordering[n],o=r[i],s=this.rewriteIdsInObject(o);try{this.setResult(i,await this.processBatchEntry(s)),this.state.position=n+1}catch(a){if(this.isTransaction())throw a;if(this.state.errors.push(a.message),a instanceof R.OperationOutcomeError&&(0,R.getStatus)(a.outcome)===429){for(let c=n;c<e.ordering.length;c++)this.setResult(e.ordering[c],Ut(a.outcome));this.state.position=e.ordering.length;return}this.setResult(i,Ut((0,R.normalizeOperationOutcome)(a))),this.state.position=n+1}}setResult(e,r){this.state.resultEntries[e]=r,this.state.pendingIndices.push(e)}async processBatchEntry(e){let r=this.getRouteForEntry(e);if(!r)throw new R.OperationOutcomeError(R.notFound);let n=this.parseBatchRequest(e,r),[i,o]=await r.handler(n,this.repo,this.router,{batch:!0});if(!(0,R.isOk)(i)&&this.isTransaction())throw new R.OperationOutcomeError(i);return Ut(i,o)}parseBatchRequest(e,r){let n=e.request,i=Object.create(null);n.ifNoneExist&&(i["if-none-exist"]=n.ifNoneExist),n.ifMatch&&(i["if-match"]=n.ifMatch),n.ifNoneMatch&&(i["if-none-match"]=n.ifNoneMatch),n.ifModifiedSince&&(i["if-modified-since"]=n.ifModifiedSince);let o;return n.method==="PATCH"?o=this.parsePatchBody(e):o=e.resource,{method:n.method,url:r?.query?n.url.slice(0,n.url.indexOf("?")):n.url,pathname:"",params:r?.params??Object.create(null),query:r?.query??Object.create(null),body:o,headers:i,config:this.req.config}}parsePatchBody(e){let r=e.resource,n;if(r?.resourceType==="Binary"){if(!r.data)throw new R.OperationOutcomeError((0,R.badRequest)("Missing entry.resource.data"));n=JSON.parse(Buffer.from(r.data,"base64").toString("utf8"))}else if(r?.resourceType==="Parameters"){if(Ra(r))return this.rewriteIds(r);if(r.parameter){n=[];for(let i of r.parameter)if(i.name==="operation"){let o=this.parsePatchParameter(i);n.push(o)}}}else throw new R.OperationOutcomeError((0,R.badRequest)("Patch entry must include a Binary or Parameters resource"));if(!Array.isArray(n))throw new R.OperationOutcomeError((0,R.badRequest)("Decoded PATCH body must be an array"));return this.rewriteIdsInArray(n)}parsePatchParameter(e){let r=e.part?.find(i=>i.name==="op")?.valueCode;if(!r)throw new R.OperationOutcomeError((0,R.badRequest)("PATCH Parameters missing op"));let n={op:r};switch(r){case"add":case"replace":case"test":for(let i of e.part)i.name==="path"?n.path=i.valueString:i.name==="value"&&(n.value=JSON.parse(i.valueString??""));break;case"copy":case"move":for(let i of e.part)i.name==="path"?n.path=i.valueString:i.name==="from"&&(n.from=i.valueString);break;case"remove":n.path=e.part?.find(i=>i.name==="path")?.valueString;break}return n}rewriteIds(e){return Array.isArray(e)?this.rewriteIdsInArray(e):typeof e=="string"?this.rewriteIdsInString(e):typeof e=="object"&&e!==null?this.rewriteIdsInObject(e):e}rewriteIdsInArray(e){return e.map(r=>this.rewriteIds(r))}rewriteIdsInObject(e){return Object.fromEntries(Object.entries(e).map(([r,n])=>[r,this.rewriteIds(n)]))}rewriteIdsInString(e){let r=va.exec(e)?.[0];if(!r)return e;let n=r.replaceAll("%3A",":"),i=this.resolvedIdentities[n];return i?e.replaceAll(r,i):e}isTransaction(){return this.bundle.type==="transaction"&&!!this.req.config?.transactions}};function Ra(t){return!!t.parameter?.some(e=>e.name==="operation"&&e.part?.some(r=>r.name==="type"))}function Ut(t,e){return{response:{outcome:t,status:(0,R.getStatus)(t).toString(),location:(0,R.isOk)(t)&&e?.id?(0,R.getReferenceString)(e):void 0},resource:e}}function vo(t,e,r){let n=new Array(e);for(let i=0;i<e;i++)n[i]=r[i];return{resourceType:"Bundle",type:`${t}-response`,entry:n}}function bo(t){return{position:t.position,resultEntries:t.resultEntries.slice(),pendingIndices:t.pendingIndices.slice(),errors:t.errors.slice()}}var O=require("@medplum/core");var M=require("@medplum/core"),ca=No(require("dataloader"),1);function E(t){return gr(t,[])}function gr(t,e){switch(typeof t){case"string":return JSON.stringify(t);case"function":return t.name?`[function ${t.name}]`:"[function]";case"object":return Sa(t,e);default:return String(t)}}function 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+"use strict";var ma=Object.create;var Vt=Object.defineProperty;var ha=Object.getOwnPropertyDescriptor;var ya=Object.getOwnPropertyNames;var Ta=Object.getPrototypeOf,ga=Object.prototype.hasOwnProperty;var Ea=(t,e,r)=>e in t?Vt(t,e,{enumerable:!0,configurable:!0,writable:!0,value:r}):t[e]=r;var Eo=(t,e)=>{for(var r in e)Vt(t,r,{get:e[r],enumerable:!0})},Io=(t,e,r,n)=>{if(e&&typeof e=="object"||typeof e=="function")for(let i of ya(e))!ga.call(t,i)&&i!==r&&Vt(t,i,{get:()=>e[i],enumerable:!(n=ha(e,i))||n.enumerable});return t};var No=(t,e,r)=>(r=t!=null?ma(Ta(t)):{},Io(e||!t||!t.__esModule?Vt(r,"default",{value:t,enumerable:!0}):r,t)),Ia=t=>Io(Vt({},"__esModule",{value:!0}),t);var $=(t,e,r)=>Ea(t,typeof e!="symbol"?e+"":e,r);var Ul={};Eo(Ul,{BatchProcessor:()=>$t,FhirRepository:()=>mn,FhirRouter:()=>ho,MAX_QUERY_STRING_LENGTH:()=>mo,MemoryRepository:()=>no,RepositoryMode:()=>fr,Router:()=>hr,buildBatchResponseBundle:()=>vo,createResourceImpl:()=>la,getExtraEntries:()=>ro,getSearchIncludeEntries:()=>Js,getSearchRevIncludeEntries:()=>Xs,makeSimpleRequest:()=>Vl,processBatch:()=>Tr,updateResourceImpl:()=>fa});module.exports=Ia(Ul);var R=require("@medplum/core");var Na=50,ba=8,va=/urn(:|%3A)uuid(:|%3A)[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}/;async function Tr(t,e,r,n){return new $t(r,e,n,t).run()}var $t=class t{constructor(e,r,n,i){$(this,"router");$(this,"repo");$(this,"bundle");$(this,"req");$(this,"resolvedIdentities");$(this,"bundleInfo");$(this,"state");this.router=e,this.repo=r,this.bundle=n,this.req=i,this.resolvedIdentities=Object.create(null),this.state={position:0,resultEntries:new Array(n.entry?.length??0),pendingIndices:[],errors:[]}}static fromState(e,r,n,i,o){let s=new t(e,r,i.bundle,n);return s.resolvedIdentities=i.resolvedIdentities,s.bundleInfo={...i.bundleInfo},s.state.position=o,s}async run(){await this.preprocess();let e=this.bundleInfo;if(!this.isTransaction()){let i=await this.processEntriesAndBuild();return this.dispatchPostEvent(),i}let r=bo(this.state),n=await this.repo.withTransaction(i=>this.withRepo(i,()=>(this.state=bo(r),this.processEntriesAndBuild())),{serializable:e.requiresStrongTransaction,resourceTypes:e.resourceTypes});return this.dispatchPostEvent(),n}async preprocess(){let e=this.bundle.type;if(e!=="batch"&&e!=="transaction")throw new R.OperationOutcomeError((0,R.badRequest)("Unrecognized bundle type: "+e));if(this.bundleInfo=await this.preprocessBundle(),this.isTransaction()){if(this.bundleInfo.updates>Na)throw new R.OperationOutcomeError((0,R.badRequest)("Transaction contains more update operations than allowed"));if(this.bundleInfo.requiresStrongTransaction&&this.state.resultEntries.length>ba)throw new R.OperationOutcomeError((0,R.badRequest)("Transaction requires strict isolation but has too many entries"))}this.dispatchPreEvent();let r=Object.create(null);for(let n=0;n<this.state.resultEntries.length;n++)this.state.resultEntries[n]&&(r[n]=this.state.resultEntries[n]);return{bundle:this.bundle,bundleInfo:{ordering:this.bundleInfo.ordering,resourceTypes:this.bundleInfo.resourceTypes,requiresStrongTransaction:this.bundleInfo.requiresStrongTransaction,updates:this.bundleInfo.updates},resolvedIdentities:this.resolvedIdentities,preprocessResults:r}}hasMoreEntries(){return this.bundleInfo!==void 0&&this.state.position<this.bundleInfo.ordering.length}getPosition(){return this.state.position}takePendingResults(){if(this.state.pendingIndices.length===0)return;let e=Object.create(null);for(let r of this.state.pendingIndices)e[r]=this.state.resultEntries[r];return this.state.pendingIndices=[],e}async processEntriesAndBuild(){for(;this.hasMoreEntries();)await this.processNextEntryImpl();return this.buildResultBundle()}dispatchPreEvent(){let e={type:"batch",bundleType:this.bundle.type,count:this.bundle.entry?.length,size:JSON.stringify(this.bundle).length};this.router.dispatchEvent(e)}dispatchPostEvent(){let e={type:"batch",bundleType:this.bundle.type,errors:this.state.errors.length?this.state.errors:void 0};this.router.dispatchEvent(e)}buildResultBundle(){return{resourceType:"Bundle",type:`${this.bundle.type}-response`,entry:this.state.resultEntries}}async withRepo(e,r){let n=this.repo;this.repo=e;try{return await r()}finally{this.repo=n}}async preprocessBundle(){let e=this.bundle.entry;if(!e?.length)throw new R.OperationOutcomeError((0,R.badRequest)("Missing bundle entries"));let r={transaction:[],batch:[],delete:[],create:[],update:[],patch:[],operation:[],"search-system":[],"search-type":[],read:[],vread:[],"history-system":[],"history-type":[],"history-instance":[]},n=new Set,i=new Set,o=!1,s=0;for(let c=0;c<e.length;c++){let u=e[c];if(!u.request?.method){this.state.resultEntries[c]=Ut((0,R.badRequest)("Missing Bundle entry request method",`Bundle.entry[${c}].request.method`));continue}let f=await this.preprocessEntry(u,c,n);if(f){if(!this.isTransaction()){this.state.resultEntries[c]=Ut(f);continue}throw new R.OperationOutcomeError(f)}let m=this.getRouteForEntry(u),g=m?.data?.interaction;if(!g||!r[g])throw new R.OperationOutcomeError((0,R.badRequest)(`Invalid REST interaction in batch: ${u.request?.method} ${u.request?.url}`));let y=m?.params?.resourceType;y&&i.add(y),g==="create"&&u.request?.ifNoneExist?o=!0:g==="update"?(u.request?.url.includes("?")&&(o=!0),s++):g==="delete"&&u.request?.url.includes("?")&&(o=!0),r[g].push(c)}let a=[];for(let c of Object.values(r))a.push(...c);return{ordering:a,requiresStrongTransaction:o,updates:s,resourceTypes:i}}async preprocessEntry(e,r,n){if(!e.request?.url)return(0,R.badRequest)("Missing Bundle entry request URL",`Bundle.entry[${r}].request.url`);let i;try{i=await this.resolveIdentity(e,`Bundle.entry[${r}]`)}catch(o){if(o instanceof R.OperationOutcomeError)return o.outcome;throw o}if(i&&(this.resolvedIdentities[i.placeholder]=i.reference,this.isTransaction())){if(n.has(i.reference))throw new R.OperationOutcomeError((0,R.badRequest)("Duplicate resource identity found in Bundle"));n.add(i.reference)}}async resolveIdentity(e,r){let i=this.getRouteForEntry(e)?.data?.interaction;if(!i)throw new R.OperationOutcomeError(R.notFound);switch(i){case"create":return this.resolveCreateIdentity(e);case"delete":case"update":case"patch":return this.resolveModificationIdentity(e,r);default:return}}getRouteForEntry(e){return this.router.find(e.request?.method,e.request?.url??"")}async resolveCreateIdentity(e){let r=e.fullUrl??"";if(e.request?.ifNoneExist){let n=await this.repo.searchResources((0,R.parseSearchRequest)(e.request.url+"?"+e.request.ifNoneExist));if(n.length===1)return{placeholder:r,reference:(0,R.getReferenceString)(n[0])}}if(e.resource)return e.resource.id=this.repo.generateId(),{placeholder:r,reference:(0,R.getReferenceString)(e.resource)}}async resolveModificationIdentity(e,r){let n=e.fullUrl??"";if(e.request?.url?.includes("?")){let i=e.request.method,o=(0,R.parseSearchRequest)(e.request.url);o.count=2,o.offset=0,o.sortRules=void 0;let[s,a]=await this.repo.searchResources(o);if(!s)switch(i){case"DELETE":return;case"PUT":if(e.resource){if(e.resource.id)throw new R.OperationOutcomeError((0,R.badRequest)("Cannot provide ID for create by update"));return e.resource.id=this.repo.generateId(),{placeholder:n,reference:(0,R.getReferenceString)(e.resource)}}return;default:throw new R.OperationOutcomeError((0,R.badRequest)(`Conditional ${e.request.method} did not match any resources`,r+".request.url"))}if(a)throw new R.OperationOutcomeError((0,R.badRequest)(`Conditional ${e.request.method} matched multiple resources`,r+".request.url"));let c=(0,R.getReferenceString)(s);return 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