@medplum/core 2.0.3 → 2.0.4

package/dist/esm/types.mjs.map

@@ -1 +1 @@
-{"version":3,"file":"types.mjs","sources":["../../src/types.ts"],"sourcesContent":["import {\n  Bundle,\n  BundleEntry,\n  ElementDefinition,\n  Resource,\n  SearchParameter,\n  StructureDefinition,\n} from '@medplum/fhirtypes';\nimport baseSchema from './base-schema.json';\nimport { SearchParameterDetails } from './searchparams';\nimport { capitalize } from './utils';\n\nexport interface TypedValue {\n  readonly type: string;\n  readonly value: any;\n}\n\n/**\n * List of property types.\n * http://www.hl7.org/fhir/valueset-defined-types.html\n * The list here includes additions found from StructureDefinition resources.\n */\nexport enum PropertyType {\n  Address = 'Address',\n  Age = 'Age',\n  Annotation = 'Annotation',\n  Attachment = 'Attachment',\n  BackboneElement = 'BackboneElement',\n  CodeableConcept = 'CodeableConcept',\n  Coding = 'Coding',\n  ContactDetail = 'ContactDetail',\n  ContactPoint = 'ContactPoint',\n  Contributor = 'Contributor',\n  Count = 'Count',\n  DataRequirement = 'DataRequirement',\n  Distance = 'Distance',\n  Dosage = 'Dosage',\n  Duration = 'Duration',\n  Expression = 'Expression',\n  Extension = 'Extension',\n  HumanName = 'HumanName',\n  Identifier = 'Identifier',\n  MarketingStatus = 'MarketingStatus',\n  Meta = 'Meta',\n  Money = 'Money',\n  Narrative = 'Narrative',\n  ParameterDefinition = 'ParameterDefinition',\n  Period = 'Period',\n  Population = 'Population',\n  ProdCharacteristic = 'ProdCharacteristic',\n  ProductShelfLife = 'ProductShelfLife',\n  Quantity = 'Quantity',\n  Range = 'Range',\n  Ratio = 'Ratio',\n  Reference = 'Reference',\n  RelatedArtifact = 'RelatedArtifact',\n  SampledData = 'SampledData',\n  Signature = 'Signature',\n  SubstanceAmount = 'SubstanceAmount',\n  SystemString = 'http://hl7.org/fhirpath/System.String',\n  Timing = 'Timing',\n  TriggerDefinition = 'TriggerDefinition',\n  UsageContext = 'UsageContext',\n  base64Binary = 'base64Binary',\n  boolean = 'boolean',\n  canonical = 'canonical',\n  code = 'code',\n  date = 'date',\n  dateTime = 'dateTime',\n  decimal = 'decimal',\n  id = 'id',\n  instant = 'instant',\n  integer = 'integer',\n  markdown = 'markdown',\n  oid = 'oid',\n  positiveInt = 'positiveInt',\n  string = 'string',\n  time = 'time',\n  unsignedInt = 'unsignedInt',\n  uri = 'uri',\n  url = 'url',\n  uuid = 'uuid',\n}\n\n/**\n * An IndexedStructureDefinition is a lookup-optimized version of a StructureDefinition.\n *\n * StructureDefinition resources contain schema information for other resource types.\n * These schemas can be used to automatically generate user interface elements for\n * resources.\n *\n * However, a StructureDefinition resource is not optimized for realtime lookups.  All\n * resource types, sub types, and property definitions are stored in a flat array of\n * ElementDefinition objects.  Therefore, to lookup the schema for a property (i.e., \"Patient.name\")\n * requires a linear scan of all ElementDefinition objects\n *\n * A StructureDefinition resource contains information about one or more types.\n * For example, the \"Patient\" StructureDefinition includes \"Patient\", \"Patient_Contact\",\n * \"Patient_Communication\", and \"Patient_Link\".  This is inefficient.\n *\n * Instead, we create an indexed version of the StructureDefinition, called IndexedStructureDefinition.\n * In an IndexedStructureDefinition, retrieving a property definition is a hashtable lookup.\n *\n * The hierarchy is:\n *   IndexedStructureDefinition - top level for one resource type\n *   TypeSchema - one per resource type and all contained BackboneElements\n *   PropertySchema - one per property/field\n */\nexport interface IndexedStructureDefinition {\n  types: { [resourceType: string]: TypeSchema };\n}\n\n/**\n * An indexed TypeSchema.\n *\n * Example:  The IndexedStructureDefinition for \"Patient\" would include the following TypeSchemas:\n *   1) Patient\n *   2) Patient_Contact\n *   3) Patient_Communication\n *   4) Patient_Link\n */\nexport interface TypeSchema {\n  structureDefinition: StructureDefinition;\n  elementDefinition: ElementDefinition;\n  display: string;\n  properties: { [name: string]: ElementDefinition };\n  searchParams?: { [code: string]: SearchParameter };\n  searchParamsDetails?: { [code: string]: SearchParameterDetails };\n  description?: string;\n  parentType?: string;\n}\n\n/**\n * Creates a new empty IndexedStructureDefinition.\n * @returns The empty IndexedStructureDefinition.\n * @deprecated Use globalSchema\n */\nexport function createSchema(): IndexedStructureDefinition {\n  return { types: {} };\n}\n\nfunction createTypeSchema(\n  typeName: string,\n  structureDefinition: StructureDefinition,\n  elementDefinition: ElementDefinition\n): TypeSchema {\n  return {\n    structureDefinition,\n    elementDefinition,\n    display: typeName,\n    description: elementDefinition.definition,\n    properties: {},\n  };\n}\n\n/**\n * Indexes a bundle of StructureDefinitions for faster lookup.\n * @param bundle A FHIR bundle StructureDefinition resources.\n * @see {@link IndexedStructureDefinition} for more details on indexed StructureDefinitions.\n */\nexport function indexStructureDefinitionBundle(bundle: Bundle): void {\n  for (const entry of bundle.entry as BundleEntry[]) {\n    const resource = entry.resource as Resource;\n    if (resource.resourceType === 'StructureDefinition') {\n      indexStructureDefinition(resource);\n    }\n  }\n}\n\n/**\n * Indexes a StructureDefinition for fast lookup.\n * @param structureDefinition The original StructureDefinition.\n * @see {@link IndexedStructureDefinition} for more details on indexed StructureDefinitions.\n */\nexport function indexStructureDefinition(structureDefinition: StructureDefinition): void {\n  const typeName = structureDefinition.name;\n  if (!typeName) {\n    return;\n  }\n\n  const elements = structureDefinition.snapshot?.element;\n  if (elements) {\n    // First pass, build types\n    elements.forEach((element) => indexType(structureDefinition, element));\n\n    // Second pass, build properties\n    elements.forEach((element) => indexProperty(element));\n  }\n}\n\n/**\n * Indexes TypeSchema from an ElementDefinition.\n * In the common case, there will be many ElementDefinition instances per TypeSchema.\n * Only the first occurrence is saved.\n * @param structureDefinition The parent type structure definition.\n * @param elementDefinition The element definition.\n * @see {@link IndexedStructureDefinition} for more details on indexed StructureDefinitions.\n */\nfunction indexType(structureDefinition: StructureDefinition, elementDefinition: ElementDefinition): void {\n  const path = elementDefinition.path as string;\n  const typeCode = elementDefinition.type?.[0]?.code;\n  if (typeCode !== undefined && typeCode !== 'Element' && typeCode !== 'BackboneElement') {\n    return;\n  }\n  const parts = path.split('.');\n  const typeName = buildTypeName(parts);\n  globalSchema.types[typeName] = createTypeSchema(typeName, structureDefinition, elementDefinition);\n  globalSchema.types[typeName].parentType = buildTypeName(parts.slice(0, parts.length - 1));\n}\n\n/**\n * Indexes PropertySchema from an 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entry.resource as SearchParameter;\n    if (resource.resourceType === 'SearchParameter') {\n      indexSearchParameter(resource);\n    }\n  }\n}\n\n/**\n * Indexes a SearchParameter resource for fast lookup.\n * Indexes by SearchParameter.code, which is the query string parameter name.\n * @param searchParam The SearchParameter resource.\n * @see {@link IndexedStructureDefinition} for more details on indexed StructureDefinitions.\n */\nexport function indexSearchParameter(searchParam: SearchParameter): void {\n  if (!searchParam.base) {\n    return;\n  }\n\n  for (const resourceType of searchParam.base) {\n    const typeSchema = globalSchema.types[resourceType];\n    if (!typeSchema) {\n      continue;\n    }\n\n    if (!typeSchema.searchParams) {\n      typeSchema.searchParams = {\n        _id: {\n          base: [resourceType],\n          code: '_id',\n          type: 'token',\n          expression: resourceType + '.id',\n        } as SearchParameter,\n        _lastUpdated: {\n          base: [resourceType],\n          code: '_lastUpdated',\n          type: 'date',\n          expression: resourceType + '.meta.lastUpdated',\n        } as SearchParameter,\n        _compartment: {\n          base: [resourceType],\n          code: '_compartment',\n          type: 'reference',\n          expression: resourceType + '.meta.compartment',\n        } as SearchParameter,\n        _profile: {\n          base: [resourceType],\n          code: '_profile',\n          type: 'uri',\n          expression: resourceType + '.meta.profile',\n        } as SearchParameter,\n        _security: {\n          base: [resourceType],\n          code: '_security',\n          type: 'token',\n          expression: resourceType + '.meta.security',\n        } as SearchParameter,\n        _source: {\n          base: [resourceType],\n          code: '_source',\n          type: 'uri',\n          expression: resourceType + '.meta.source',\n        } as SearchParameter,\n        _tag: {\n          base: [resourceType],\n          code: '_tag',\n          type: 'token',\n          expression: resourceType + '.meta.tag',\n        } as SearchParameter,\n      };\n    }\n\n    typeSchema.searchParams[searchParam.code as string] = searchParam;\n  }\n}\n\n/**\n * Returns the type name for an ElementDefinition.\n * @param elementDefinition The element definition.\n * @returns The Medplum type name.\n */\nexport function getElementDefinitionTypeName(elementDefinition: ElementDefinition): string {\n  const code = elementDefinition.type?.[0]?.code as string;\n  return code === 'BackboneElement' || code === 'Element'\n    ? buildTypeName(elementDefinition.path?.split('.') as string[])\n    : code;\n}\n\nexport function buildTypeName(components: string[]): string {\n  if (components.length === 1) {\n    return components[0];\n  }\n  return components.map(capitalize).join('');\n}\n\nexport function getPropertyDisplayName(path: string): string {\n  // Get the property name, which is the remainder after the last period\n  // For example, for path \"Patient.birthDate\"\n  // the property name is \"birthDate\"\n  const propertyName = path.replaceAll('[x]', '').split('.').pop() as string;\n\n  // Special case for ID\n  if (propertyName === 'id') {\n    return 'ID';\n  }\n\n  // Split by capital letters\n  // Capitalize the first letter of each word\n  // Join together with spaces in between\n  // Then normalize whitespace to single space character\n  // For example, for property name \"birthDate\",\n  // the display name is \"Birth Date\".\n  return propertyName\n    .split(/(?=[A-Z])/)\n    .map(capitalize)\n    .join(' ')\n    .replace('_', ' ')\n    .replace(/\\s+/g, ' ');\n}\n\n/**\n * Returns an element definition by type and property name.\n * Handles content references.\n * @param typeName The type name.\n * @param propertyName The property name.\n * @returns The element definition if found.\n */\nexport function getElementDefinition(typeName: string, propertyName: string): 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+{"version":3,"file":"types.mjs","sources":["../../src/types.ts"],"sourcesContent":["import {\n  Bundle,\n  BundleEntry,\n  ElementDefinition,\n  Resource,\n  SearchParameter,\n  StructureDefinition,\n} from '@medplum/fhirtypes';\nimport baseSchema from './base-schema.json';\nimport { SearchParameterDetails } from './search/details';\nimport { capitalize } from './utils';\n\nexport interface TypedValue {\n  readonly type: string;\n  readonly value: any;\n}\n\n/**\n * List of property types.\n * http://www.hl7.org/fhir/valueset-defined-types.html\n * The list here includes additions found from StructureDefinition resources.\n */\nexport enum PropertyType {\n  Address = 'Address',\n  Age = 'Age',\n  Annotation = 'Annotation',\n  Attachment = 'Attachment',\n  BackboneElement = 'BackboneElement',\n  CodeableConcept = 'CodeableConcept',\n  Coding = 'Coding',\n  ContactDetail = 'ContactDetail',\n  ContactPoint = 'ContactPoint',\n  Contributor = 'Contributor',\n  Count = 'Count',\n  DataRequirement = 'DataRequirement',\n  Distance = 'Distance',\n  Dosage = 'Dosage',\n  Duration = 'Duration',\n  Expression = 'Expression',\n  Extension = 'Extension',\n  HumanName = 'HumanName',\n  Identifier = 'Identifier',\n  MarketingStatus = 'MarketingStatus',\n  Meta = 'Meta',\n  Money = 'Money',\n  Narrative = 'Narrative',\n  ParameterDefinition = 'ParameterDefinition',\n  Period = 'Period',\n  Population = 'Population',\n  ProdCharacteristic = 'ProdCharacteristic',\n  ProductShelfLife = 'ProductShelfLife',\n  Quantity = 'Quantity',\n  Range = 'Range',\n  Ratio = 'Ratio',\n  Reference = 'Reference',\n  RelatedArtifact = 'RelatedArtifact',\n  SampledData = 'SampledData',\n  Signature = 'Signature',\n  SubstanceAmount = 'SubstanceAmount',\n  SystemString = 'http://hl7.org/fhirpath/System.String',\n  Timing = 'Timing',\n  TriggerDefinition = 'TriggerDefinition',\n  UsageContext = 'UsageContext',\n  base64Binary = 'base64Binary',\n  boolean = 'boolean',\n  canonical = 'canonical',\n  code = 'code',\n  date = 'date',\n  dateTime = 'dateTime',\n  decimal = 'decimal',\n  id = 'id',\n  instant = 'instant',\n  integer = 'integer',\n  markdown = 'markdown',\n  oid = 'oid',\n  positiveInt = 'positiveInt',\n  string = 'string',\n  time = 'time',\n  unsignedInt = 'unsignedInt',\n  uri = 'uri',\n  url = 'url',\n  uuid = 'uuid',\n}\n\n/**\n * An IndexedStructureDefinition is a lookup-optimized version of a StructureDefinition.\n *\n * StructureDefinition resources contain schema information for other resource types.\n * These schemas can be used to automatically generate user interface elements for\n * resources.\n *\n * However, a StructureDefinition resource is not optimized for realtime lookups.  All\n * resource types, sub types, and property definitions are stored in a flat array of\n * ElementDefinition objects.  Therefore, to lookup the schema for a property (i.e., \"Patient.name\")\n * requires a linear scan of all ElementDefinition objects\n *\n * A StructureDefinition resource contains information about one or more types.\n * For example, the \"Patient\" StructureDefinition includes \"Patient\", \"Patient_Contact\",\n * \"Patient_Communication\", and \"Patient_Link\".  This is inefficient.\n *\n * Instead, we create an indexed version of the StructureDefinition, called IndexedStructureDefinition.\n * In an IndexedStructureDefinition, retrieving a property definition is a hashtable lookup.\n *\n * The hierarchy is:\n *   IndexedStructureDefinition - top level for one resource type\n *   TypeSchema - one per resource type and all contained BackboneElements\n *   PropertySchema - one per property/field\n */\nexport interface IndexedStructureDefinition {\n  types: { [resourceType: string]: TypeSchema };\n}\n\n/**\n * An indexed TypeSchema.\n *\n * Example:  The IndexedStructureDefinition for \"Patient\" would include the following TypeSchemas:\n *   1) Patient\n *   2) Patient_Contact\n *   3) Patient_Communication\n *   4) Patient_Link\n */\nexport interface TypeSchema {\n  structureDefinition: StructureDefinition;\n  elementDefinition: ElementDefinition;\n  display: string;\n  properties: { [name: string]: ElementDefinition };\n  searchParams?: { [code: string]: SearchParameter };\n  searchParamsDetails?: { [code: string]: SearchParameterDetails };\n  description?: string;\n  parentType?: string;\n}\n\n/**\n * Indexes a bundle of StructureDefinitions for faster lookup.\n * @param bundle A FHIR bundle StructureDefinition resources.\n * @see {@link IndexedStructureDefinition} for more details on indexed StructureDefinitions.\n */\nexport function indexStructureDefinitionBundle(bundle: Bundle): void {\n  for (const entry of bundle.entry as BundleEntry[]) {\n    const resource = entry.resource as Resource;\n    if (resource.resourceType === 'StructureDefinition') {\n      indexStructureDefinition(resource);\n    }\n  }\n}\n\n/**\n * Indexes a StructureDefinition for fast lookup.\n * @param structureDefinition The original StructureDefinition.\n * @see {@link IndexedStructureDefinition} for more details on indexed StructureDefinitions.\n */\nexport function indexStructureDefinition(structureDefinition: StructureDefinition): void {\n  const typeName = structureDefinition.name;\n  if (!typeName) {\n    return;\n  }\n\n  const elements = structureDefinition.snapshot?.element;\n  if (elements) {\n    // First pass, build types\n    elements.forEach((element) => indexType(structureDefinition, element));\n\n    // Second pass, build properties\n    elements.forEach((element) => indexProperty(element));\n  }\n}\n\n/**\n * Indexes TypeSchema from an ElementDefinition.\n * In the common case, there will be many ElementDefinition instances per TypeSchema.\n * Only the first occurrence is saved.\n * @param structureDefinition The parent type structure definition.\n * @param elementDefinition The element definition.\n * @see {@link IndexedStructureDefinition} for more details on indexed StructureDefinitions.\n */\nfunction indexType(structureDefinition: StructureDefinition, elementDefinition: ElementDefinition): void {\n  const path = elementDefinition.path as string;\n  const typeCode = elementDefinition.type?.[0]?.code;\n  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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@medplum/core",
-  "version": "2.0.3",
+  "version": "2.0.4",
   "description": "Medplum TS/JS Library",
   "author": "Medplum <hello@medplum.com>",
   "license": "Apache-2.0",

package/dist/esm/match.mjs.map

@@ -1 +0,0 @@
-{"version":3,"file":"match.mjs","sources":["../../src/match.ts"],"sourcesContent":["import { Reference, Resource, SearchParameter } from '@medplum/fhirtypes';\nimport { evalFhirPath } from './fhirpath';\nimport { Filter, Operator, SearchRequest } from './search';\nimport { getSearchParameterDetails, SearchParameterType } from './searchparams';\nimport { globalSchema } from './types';\n\n/**\n * Determines if the resource matches the search request.\n * @param resource The resource that was created or updated.\n * @param searchRequest The subscription criteria as a search request.\n * @returns True if the resource satisfies the search request.\n */\nexport function matchesSearchRequest(resource: Resource, searchRequest: SearchRequest): boolean {\n  if (searchRequest.resourceType !== resource.resourceType) {\n    return false;\n  }\n  if (searchRequest.filters) {\n    for (const filter of searchRequest.filters) {\n      if (!matchesSearchFilter(resource, searchRequest, filter)) {\n        return false;\n      }\n    }\n  }\n  return true;\n}\n\n/**\n * Determines if the resource matches the search filter.\n * @param resource The resource that was created or updated.\n * @param filter One of the filters of a subscription criteria.\n * @returns True if the resource satisfies the search filter.\n */\nfunction matchesSearchFilter(resource: Resource, searchRequest: SearchRequest, filter: Filter): boolean {\n  const searchParam = globalSchema.types[searchRequest.resourceType]?.searchParams?.[filter.code];\n  switch (searchParam?.type) {\n    case 'reference':\n      return matchesReferenceFilter(resource, filter, searchParam);\n    case 'string':\n      return matchesStringFilter(resource, filter, searchParam);\n    case 'token':\n      return matchesTokenFilter(resource, filter, searchParam);\n    case 'date':\n      return matchesDateFilter(resource, filter, searchParam);\n  }\n  // Unknown search parameter or search parameter type\n  // Default fail the check\n  return false;\n}\n\nfunction matchesReferenceFilter(resource: Resource, filter: Filter, searchParam: SearchParameter): boolean {\n  const values = evalFhirPath(searchParam.expression as string, resource) as (Reference | string)[];\n  const negated = isNegated(filter.operator);\n\n  if (filter.value === '' && values.length === 0) {\n    // If the filter operator is \"equals\", then the filter matches.\n    // If the filter operator is \"not equals\", then the filter does not match.\n    return filter.operator === Operator.EQUALS;\n  }\n\n  // Normalize the values array into reference strings\n  const references = values.map((value) => (typeof value === 'string' ? value : value.reference));\n\n  for (const filterValue of filter.value.split(',')) {\n    let match = references.includes(filterValue);\n    if (!match && filter.code === '_compartment') {\n      // Backwards compability for compartment search parameter\n      // In previous versions, the resource type was not required in compartment 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package/dist/esm/search.mjs.map

@@ -1 +0,0 @@
-{"version":3,"file":"search.mjs","sources":["../../src/search.ts"],"sourcesContent":["import { ResourceType } from '@medplum/fhirtypes';\n\nexport const DEFAULT_SEARCH_COUNT = 20;\n\nexport interface SearchRequest {\n  readonly resourceType: ResourceType;\n  filters?: Filter[];\n  sortRules?: SortRule[];\n  offset?: number;\n  count?: number;\n  fields?: string[];\n  name?: string;\n  total?: 'none' | 'estimate' | 'accurate';\n  revInclude?: string;\n}\n\nexport interface Filter {\n  code: string;\n  operator: Operator;\n  value: string;\n  unitSystem?: string;\n  unitCode?: string;\n}\n\nexport interface SortRule {\n  code: string;\n  descending?: boolean;\n}\n\n/**\n * Search operators.\n * These operators represent \"modifiers\" and \"prefixes\" in FHIR search.\n * See: https://www.hl7.org/fhir/search.html\n */\nexport enum Operator {\n  EQUALS = 'eq',\n  NOT_EQUALS = 'ne',\n\n  // Numbers\n  GREATER_THAN = 'gt',\n  LESS_THAN = 'lt',\n  GREATER_THAN_OR_EQUALS = 'ge',\n  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string properties, modifiers are appended to the key, e.g. \"name:contains=eve\".\n *\n * For date and numeric properties, prefixes are prepended to the value, e.g. \"birthdate=gt2000\".\n *\n * See the FHIR search spec: http://hl7.org/fhir/r4/search.html\n *\n * @param key The URL parameter key.\n * @param value The URL parameter value.\n * @returns The parsed search filter.\n */\nfunction parseSearchFilter(key: string, value: string): Filter {\n  let code = key;\n  let operator = Operator.EQUALS;\n\n  for (const modifier of MODIFIER_OPERATORS) {\n    const modifierIndex = code.indexOf(':' + modifier);\n    if (modifierIndex !== -1) {\n      operator = modifier;\n      code = code.substring(0, modifierIndex);\n    }\n  }\n\n  for (const prefix of PREFIX_OPERATORS) {\n    if (value.match(new RegExp('^' + prefix + '\\\\d'))) {\n      operator = prefix;\n      value = value.substring(prefix.length);\n    }\n  }\n\n  return { code, operator, value };\n}\n\n/**\n * Formats a search 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package/dist/esm/searchparams.mjs.map

@@ -1 +0,0 @@
-{"version":3,"file":"searchparams.mjs","sources":["../../src/searchparams.ts"],"sourcesContent":["import { ElementDefinition, SearchParameter } from '@medplum/fhirtypes';\nimport { globalSchema, PropertyType } from './types';\nimport { capitalize } from './utils';\n\nexport enum SearchParameterType {\n  BOOLEAN = 'BOOLEAN',\n  NUMBER = 'NUMBER',\n  QUANTITY = 'QUANTITY',\n  TEXT = 'TEXT',\n  REFERENCE = 'REFERENCE',\n  DATE = 'DATE',\n  DATETIME = 'DATETIME',\n  PERIOD = 'PERIOD',\n}\n\nexport interface SearchParameterDetails {\n  readonly columnName: string;\n  readonly type: SearchParameterType;\n  readonly elementDefinition?: ElementDefinition;\n  readonly array?: boolean;\n}\n\n/**\n * Returns the type details of a SearchParameter.\n *\n * The SearchParameter resource has a \"type\" parameter, but that is missing some critical information.\n *\n * For example:\n *   1) The \"date\" type includes \"date\", \"datetime\", and \"period\".\n *   2) The \"token\" type includes enums and 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