@medplum/cli 2.0.28 → 2.0.30
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/dist/esm/index.mjs
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#!/usr/bin/env node
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var Z=(e=>typeof require<"u"?require:typeof Proxy<"u"?new Proxy(e,{get:(t,o)=>(typeof require<"u"?require:t)[o]}):e)(function(e){if(typeof require<"u")return require.apply(this,arguments);throw Error('Dynamic require of "'+e+'" is not supported')});import{MEDPLUM_VERSION as Do,normalizeErrorString as Io}from"@medplum/core";import{Command as Ro}from"commander";import To from"dotenv";import{getDisplayString as Ve,normalizeErrorString as Je}from"@medplum/core";import{platform as Ye}from"os";import{exec as Xe}from"child_process";import{createServer as Ze}from"http";import{Command as Oe,Option as $e}from"commander";function m(e){return new Oe(e).option("--client-id <clientId>","FHIR server client id").option("--client-secret <clientSecret>","FHIR server client secret").option("--base-url <baseUrl>","FHIR server base url").option("--token-url <tokenUrl>","FHIR server token url").option("--authorize-url <authorizeUrl>","FHIR server authorize url").option("--fhir-url-path <fhirUrlPath>","FHIR server url path").addOption(new $e("--auth-type <authType>","Type of authentication").choices(["basic","client_credentials","authorization_code","jwt-bearer","token-exchange"]))}import{MedplumClient as ze}from"@medplum/core";import{ClientStorage as Le}from"@medplum/core";import{existsSync as Q,mkdirSync as We,readFileSync as _e,writeFileSync as Ke}from"fs";import{homedir as qe}from"os";import{resolve as ee}from"path";var y=class extends Le{constructor(o){super();this.dirName=ee(qe(),".medplum"),this.fileName=ee(this.dirName,o+".json")}clear(){this.writeFile({})}getString(o){return this.readFile()?.[o]}setString(o,n){let a=this.readFile()??{};n?a[o]=n:delete a[o],this.writeFile(a)}getObject(o){let n=this.getString(o);return n?JSON.parse(n):void 0}setObject(o,n){this.setString(o,n?JSON.stringify(n):void 0)}readFile(){if(Q(this.fileName))return JSON.parse(_e(this.fileName,"utf8"))}writeFile(o){Q(this.dirName)||We(this.dirName),Ke(this.fileName,JSON.stringify(o,null,2),"utf8")}};async function l(e,t){let o=t??"default",n=new y(o),{baseUrl:a,fhirUrlPath:i,accessToken:s,tokenUrl:c,authorizeUrl:u,fetchApi:g}=Ge(e,n),S=new ze({fetch:g,baseUrl:a,tokenUrl:c,fhirUrlPath:i,authorizeUrl:u,storage:n,onUnauthenticated:He});s&&S.setAccessToken(s);let w=e.clientId||process.env.MEDPLUM_CLIENT_ID,C=e.clientSecret||process.env.MEDPLUM_CLIENT_SECRET;return w&&C&&(S.setBasicAuth(w,C),await S.startClientLogin(w,C)),S}function Ge(e,t){let o=e.baseUrl??t.getString("baseUrl")??process.env.MEDPLUM_BASE_URL??"https://api.medplum.com/",n=e.fhirUrlPath??t.getString("fhirUrlPath")??process.env.MEDPLUM_FHIR_URL_PATH??"",a=e.accessToken??t.getString("accessToken")??process.env.MEDPLUM_CLIENT_ACCESS_TOKEN??"",i=e.tokenUrl??t.getString("tokenUrl")??process.env.MEDPLUM_TOKEN_URL??"",s=e.authorizeUrl??t.getString("authorizeUrl")??process.env.MEDPLUM_AUTHORIZE_URL??"",c=e.fetch??fetch;return{baseUrl:o,fhirUrlPath:n,accessToken:a,tokenUrl:i,authorizeUrl:s,fetchApi:c}}function He(){console.log("Unauthenticated: run `npx medplum login` to sign in")}var te="medplum-cli",oe="http://localhost:9615",I=m("login"),R=m("whoami");I.action(async e=>{let t=await l(e);await Qe(t)});R.action(async e=>{let t=await l(e);ot(t)});async function Qe(e){await et(e);let t=new URL(e.getAuthorizeUrl());t.searchParams.set("client_id",te),t.searchParams.set("redirect_uri",oe),t.searchParams.set("scope","openid"),t.searchParams.set("response_type","code"),t.searchParams.set("prompt","login"),await tt(t.toString())}async function et(e){let t=Ze(async(o,n)=>{let a=new URL(o.url,"http://localhost:9615"),i=a.searchParams.get("code");if(a.pathname==="/"&&i)try{let s=await e.processCode(i,{clientId:te,redirectUri:oe});n.writeHead(200,{"Content-Type":"text/plain"}),n.end(`Signed in as ${Ve(s)}. You may close this window.`)}catch(s){n.writeHead(400,{"Content-Type":"text/plain"}),n.end(`Error: ${Je(s)}`)}finally{t.close()}else n.writeHead(404,{"Content-Type":"text/plain"}),n.end("Not found")}).listen(9615)}async function tt(e){let t=Ye(),o;switch(t){case"openbsd":case"linux":o=`xdg-open '${e}'`;break;case"darwin":o=`open '${e}'`;break;case"win32":o=`cmd /c start "" "${e}"`;break;default:throw new Error("Unsupported platform: "+t)}Xe(o)}function ot(e){let t=e.getActiveLogin();t?(console.log(`Server: ${e.getBaseUrl()}`),console.log(`Profile: ${t.profile.display} (${t.profile.reference})`),console.log(`Project: ${t.project.display} (${t.project.reference})`)):console.log("Not logged in")}import{Command as mo}from"commander";import{CloudFormationClient as nt,DescribeStackResourcesCommand as rt,DescribeStacksCommand as at,ListStacksCommand as it}from"@aws-sdk/client-cloudformation";import{CloudFrontClient as st}from"@aws-sdk/client-cloudfront";import{ECSClient as ct}from"@aws-sdk/client-ecs";import{S3Client as mt}from"@aws-sdk/client-s3";var T=new nt({}),ne=new st({}),re=new ct({}),ae=new mt({}),lt="medplum:environment";async function U(){return(await T.send(new it({}))).StackSummaries?.filter(t=>t.StackName&&t.StackStatus!=="DELETE_COMPLETE")||[]}async function v(e){let t=await U();for(let o of t){let n=o.StackName,a=await B(n);if(a?.tag===e)return a}}async function B(e){let t=new at({StackName:e}),n=(await T.send(t))?.Stacks?.[0],a=n?.Tags?.find(c=>c.Key===lt);if(!a)return;let i=await T.send(new rt({StackName:e}));if(!i.StackResources)return;let s={stack:n,tag:a.Value};for(let c of i.StackResources)c.ResourceType==="AWS::ECS::Cluster"?s.ecsCluster=c:c.ResourceType==="AWS::ECS::Service"?s.ecsService=c:c.ResourceType==="AWS::S3::Bucket"&&c.LogicalResourceId?.startsWith("FrontEndAppBucket")?s.appBucket=c:c.ResourceType==="AWS::S3::Bucket"&&c.LogicalResourceId?.startsWith("StorageStorageBucket")?s.storageBucket=c:c.ResourceType==="AWS::CloudFront::Distribution"&&c.LogicalResourceId?.startsWith("FrontEndAppDistribution")&&(s.appDistribution=c);return s}function k(e){console.log(`Medplum Tag: ${e.tag}`),console.log(`Stack Name: ${e.stack.StackName}`),console.log(`Stack ID: ${e.stack.StackId}`),console.log(`Status: ${e.stack.StackStatus}`),console.log(`ECS Cluster: ${e.ecsCluster?.PhysicalResourceId}`),console.log(`ECS Service: ${j(e.ecsService)}`),console.log(`App Bucket: ${e.appBucket?.PhysicalResourceId}`),console.log(`Storage Bucket: ${e.storageBucket?.PhysicalResourceId}`)}function j(e){return e?.PhysicalResourceId?.split("/")?.pop()||""}async function ie(e){let t=await v(e);if(!t){console.log("Stack not found");return}k(t)}import{ACMClient as ce,ListCertificatesCommand as dt,RequestCertificateCommand as ut}from"@aws-sdk/client-acm";import{GetParameterCommand as pt,PutParameterCommand as ft,SSMClient as gt}from"@aws-sdk/client-ssm";import{GetCallerIdentityCommand as yt,STSClient as ht}from"@aws-sdk/client-sts";import{generateKeyPairSync as St,randomUUID as wt}from"crypto";import{existsSync as Ct,writeFileSync as bt}from"fs";import{resolve as vt}from"path";import Et from"readline";var Mt=e=>`${e}DomainName`,me=e=>`${e}SslCertArn`,x;async function le(){let e={apiPort:8103,region:"us-east-1"};x=Et.createInterface({input:process.stdin,output:process.stdout}),d("MEDPLUM"),r("This tool prepares the necessary prerequisites for deploying Medplum in your AWS account."),r(""),r("Most Medplum infrastructure is deployed using the AWS CDK."),r("However, some AWS resources must be created manually, such as email addresses and SSL certificates."),r("This tool will help you create those resources."),r(""),r("Upon completion, this tool will:"),r(" 1. Generate a Medplum CDK config file (i.e., medplum.demo.config.json)"),r(" 2. Optionally generate an AWS CloudFront signing key"),r(" 3. Optionally request SSL certificates from AWS Certificate Manager"),r(" 4. Optionally write server config settings to AWS Parameter Store"),r(""),r("The Medplum infra config file is an input to the Medplum CDK."),r("The Medplum CDK will create and manage the necessary AWS resources."),r(""),r("We will ask a series of questions to generate your infra config file."),r("Some questions have predefined options in [square brackets]."),r("Some questions have default values in (parentheses), which you can accept by pressing Enter."),r("Press Ctrl+C at any time to exit.");let t=await kt(e.region);t||(r("It appears that you do not have AWS credentials configured."),r("AWS credentials are not strictly required, but will enable some additional features."),r("If you intend to use AWS credentials, please configure them now."),await P("Do you want to continue without AWS credentials?")),d("ENVIRONMENT NAME"),r('Medplum deployments have a short environment name such as "prod", "staging", "alice", or "demo".'),r("The environment name is used in multiple places:"),r(" 1. As part of config file names (i.e., medplum.demo.config.json)"),r(" 2. As the base of CloudFormation stack names (i.e., MedplumDemo)"),r(" 3. AWS Parameter Store keys (i.e., /medplum/demo/...)"),e.name=await f("What is your environment name?","demo"),r('Using environment name "'+e.name+'"...'),d("CONFIG FILE"),r("Medplum Infrastructure will create a config file in the current directory.");let o=await f("What is the config file name?",`medplum.${e.name}.config.json`);Ct(o)&&(r("Config file already exists."),await P("Do you want to overwrite the config file?")),r('Using config file "'+o+'"...'),p(o,e),d("AWS REGION"),r("Most Medplum resources will be created in a single AWS region."),e.region=await f("Enter your AWS region:","us-east-1"),p(o,e),d("AWS ACCOUNT NUMBER"),r("Medplum Infrastructure will use your AWS account number to create AWS resources."),t&&r("Using the AWS CLI, your current account ID is: "+t),e.accountNumber=await f("What is your AWS account number?",t),p(o,e),d("STACK NAME"),r("Medplum will create a CloudFormation stack to manage AWS resources."),r("AWS CloudFormation stack names ");let n="Medplum"+e.name.charAt(0).toUpperCase()+e.name.slice(1);for(e.stackName=await f("Enter your CloudFormation stack name?",n),p(o,e),d("BASE DOMAIN NAME"),r("Please enter the base domain name for your Medplum deployment."),r(""),r("Medplum deploys multiple subdomains for various services."),r(""),r('For example, "api." for the REST API and "app." for the web application.'),r("The base domain name is the common suffix for all subdomains."),r(""),r('For example, if your base domain name is "example.com",'),r('then the REST API will be "api.example.com".'),r(""),r('The base domain should include the TLD (i.e., ".com", ".org", ".net").'),r(""),r("Note that you must own the base domain, and it must use Route53 DNS.");!e.domainName;)e.domainName=await f("Enter your base domain name:");p(o,e),d("SUPPORT EMAIL"),r("Medplum sends transactional emails to users."),r("For example, emails to new users or for password reset."),r("Medplum will use the support email address to send these emails."),r("Note that you must verify the support email address in SES.");let a=await f("Enter your support email address:");d("API DOMAIN NAME"),r("Medplum deploys a REST API for the backend services."),e.apiDomainName=await f("Enter your REST API domain name:","api."+e.domainName),e.baseUrl=`https://${e.apiDomainName}/`,p(o,e),d("APP DOMAIN NAME"),r("Medplum deploys a web application for the user interface."),e.appDomainName=await f("Enter your web application domain name:","app."+e.domainName),p(o,e),d("STORAGE DOMAIN NAME"),r("Medplum deploys a storage service for file uploads."),e.storageDomainName=await f("Enter your storage domain name:","storage."+e.domainName),p(o,e),d("STORAGE BUCKET"),r("Medplum uses an S3 bucket to store binary content such as file uploads."),r("Medplum will create a the S3 bucket as part of the CloudFormation stack."),e.storageBucketName=await f("Enter your storage bucket name:","medplum-"+e.name+"-storage"),p(o,e),d("MAX AVAILABILITY ZONES"),r("Medplum API servers can be deployed in multiple availability zones."),r("This provides redundancy and high availability."),r("However, it also increases the cost of the deployment."),r("If you want to use all availability zones, choose a large number such as 99."),r("If you want to restrict the number, for example to manage EIP limits,"),r("then choose a small number such as 1 or 2."),e.maxAzs=await E("Enter the maximum number of availability zones:",[1,2,3,99],2),d("DATABASE INSTANCES"),r("Medplum uses a relational database to store data."),r("You can set up your own database,"),r("or Medplum can create a new RDS database as part of the CloudFormation stack."),await O("Do you want to create a new RDS database as part of the CloudFormation stack?")?(r("Medplum will create a new RDS database as part of the CloudFormation stack."),r(""),r("If you need high availability, you can choose multiple instances."),r("Use 1 for a single instance, or 2 for a primary and a standby."),e.rdsInstances=await E("Enter the number of database instances:",[1,2],1)):(r("Medplum will not create a new RDS database."),r("Please create a new RDS database and enter the database name, username, and password."),r('Set the AWS Secrets Manager secret ARN in the config file in the "rdsSecretsArn" setting.'),e.rdsSecretsArn="TODO"),p(o,e),d("SERVER INSTANCES"),r("Medplum uses AWS Fargate to run the API servers."),r("Medplum will create a new Fargate cluster as part of the CloudFormation stack."),r("Fargate will automatically scale the number of servers up and down."),r("If you need high availability, you can choose multiple instances."),e.desiredServerCount=await E("Enter the number of server instances:",[1,2,3,4,6,8],1),p(o,e),d("SERVER MEMORY"),r("You can choose the amount of memory for each server instance."),r("The default is 512 MB, which is sufficient for getting started."),r("Note that only certain CPU units are compatible with memory units."),r('Consult AWS Fargate "Task Definition Parameters" for more information.'),e.serverMemory=await E("Enter the server memory (MB):",[512,1024,2048,4096,8192,16384],512),p(o,e),d("SERVER CPU"),r("You can choose the amount of CPU for each server instance."),r("CPU is expressed as an integer using AWS CPU units"),r("The default is 256, which is sufficient for getting started."),r("Note that only certain CPU units are compatible with memory units."),r('Consult AWS Fargate "Task Definition Parameters" for more information.'),e.serverCpu=await E("Enter the server CPU:",[256,512,1024,2048,4096,8192,16384],256),p(o,e),d("SERVER IMAGE"),r("Medplum uses Docker images for the API servers."),r("You can choose the image to use for the servers."),r("Docker images can be loaded from either Docker Hub or AWS ECR."),r("The default is the latest Medplum release."),e.serverImage=await f("Enter the server image:","medplum/medplum-server:latest"),p(o,e),d("SIGNING KEY"),r("Medplum uses AWS CloudFront Presigned URLs for binary content such as file uploads.");let{privateKey:i,publicKey:s,passphrase:c}=At();e.storagePublicKey=s,p(o,e),d("SSL CERTIFICATES"),r("Medplum will now check for existing SSL certificates for the subdomains.");let u=await Pt(e.region);r("Found "+u.length+" certificate(s).");for(let{region:S,certName:w}of[{region:e.region,certName:"api"},{region:"us-east-1",certName:"app"},{region:"us-east-1",certName:"storage"}]){r("");let C=await xt(e,u,S,w);e[me(w)]=C,p(o,e)}d("AWS PARAMETER STORE"),r("Medplum uses AWS Parameter Store to store sensitive configuration values."),r("These values will be encrypted at rest."),r(`The values will be stored in the "/medplum/${e.name}" path.`);let g={port:e.apiPort,baseUrl:e.baseUrl,appBaseUrl:`https://${e.appDomainName}/`,storageBaseUrl:`https://${e.storageDomainName}/binary/`,binaryStorage:`s3:${e.storageBucketName}`,signingKey:i,signingKeyPassphrase:c,supportEmail:a};r(JSON.stringify({...g,signingKey:"****",signingKeyPassphrase:"****"},null,2)),await P("Do you want to store these values in AWS Parameter Store?"),await Rt(e.region,`/medplum/${e.name}/`,g),d("DONE!"),r("Medplum configuration complete."),r("You can now proceed to deploying the Medplum infrastructure with CDK."),r("Run:"),r(""),r(` npx cdk bootstrap -c config=${o}`),r(` npx cdk synth -c config=${o}`),e.region==="us-east-1"?r(` npx cdk deploy -c config=${o}`):r(` npx cdk deploy -c config=${o} --all`),r(""),r("See Medplum documentation for more information:"),r(""),r(" https://www.medplum.com/docs/self-hosting/install-on-aws"),r(""),x.close()}function r(e){x.write(e+`
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var te=(e=>typeof require<"u"?require:typeof Proxy<"u"?new Proxy(e,{get:(t,o)=>(typeof require<"u"?require:t)[o]}):e)(function(e){if(typeof require<"u")return require.apply(this,arguments);throw Error('Dynamic require of "'+e+'" is not supported')});import{MEDPLUM_VERSION as Uo,normalizeErrorString as Oo}from"@medplum/core";import{Command as Bo}from"commander";import Fo from"dotenv";import{ContentType as T,getDisplayString as Ze,normalizeErrorString as Qe}from"@medplum/core";import{exec as et}from"child_process";import{createServer as tt}from"http";import{platform as ot}from"os";import{MedplumClient as Ve}from"@medplum/core";import{ClientStorage as We}from"@medplum/core";import{existsSync as oe,mkdirSync as _e,readFileSync as Ke,writeFileSync as qe}from"fs";import{homedir as ze}from"os";import{resolve as ne}from"path";var S=class extends We{constructor(o){super();this.dirName=ne(ze(),".medplum"),this.fileName=ne(this.dirName,o+".json")}clear(){this.writeFile({})}getString(o){return this.readFile()?.[o]}setString(o,n){let a=this.readFile()??{};n?a[o]=n:delete a[o],this.writeFile(a)}getObject(o){let n=this.getString(o);return n?JSON.parse(n):void 0}setObject(o,n){this.setString(o,n?JSON.stringify(n):void 0)}readFile(){if(oe(this.fileName))return JSON.parse(Ke(this.fileName,"utf8"))}writeFile(o){oe(this.dirName)||_e(this.dirName),qe(this.fileName,JSON.stringify(o,null,2),"utf8")}};async function l(e){let t=e.profile??"default",o=new S(t);Je(o,t);let{baseUrl:n,fhirUrlPath:a,accessToken:i,tokenUrl:s,authorizeUrl:c,clientId:u,clientSecret:f}=Ge(e,o),v=e.fetch??fetch,h=new Ve({fetch:v,baseUrl:n,tokenUrl:s,fhirUrlPath:a,authorizeUrl:c,storage:o,onUnauthenticated:He});return i&&h.setAccessToken(i),u&&f&&(h.setBasicAuth(u,f),await h.startClientLogin(u,f)),h}function Ge(e,t){let o=t.getObject("options"),n=e.baseUrl??o?.baseUrl??process.env.MEDPLUM_BASE_URL??"https://api.medplum.com/",a=e.fhirUrlPath??o?.fhirUrlPath??process.env.MEDPLUM_FHIR_URL_PATH,i=e.accessToken??o?.accessToken??process.env.MEDPLUM_CLIENT_ACCESS_TOKEN,s=e.tokenUrl??o?.tokenUrl??process.env.MEDPLUM_TOKEN_URL,c=e.authorizeUrl??o?.authorizeUrl??process.env.MEDPLUM_AUTHORIZE_URL,u=e.clientId??o?.clientId??process.env.MEDPLUM_CLIENT_ID,f=e.clientSecret??o?.clientSecret??process.env.MEDPLUM_CLIENT_SECRET;return{baseUrl:n,fhirUrlPath:a,accessToken:i,tokenUrl:s,authorizeUrl:c,clientId:u,clientSecret:f}}function He(){console.log("Unauthenticated: run `npx medplum login` to sign in")}function Je(e,t){if(t==="default")return;if(!e.getObject("options"))throw new Error(`Profile ${t} does not exist`)}import{Command as Xe,Option as Ye}from"commander";function m(e){return new Xe(e).option("--client-id <clientId>","FHIR server client id").option("--client-secret <clientSecret>","FHIR server client secret").option("--base-url <baseUrl>","FHIR server base url").option("--token-url <tokenUrl>","FHIR server token url").option("--authorize-url <authorizeUrl>","FHIR server authorize url").option("--fhir-url-path <fhirUrlPath>","FHIR server url path").option("-p, --profile <profile>","Profile name").addOption(new Ye("--auth-type <authType>","Type of authentication").choices(["basic","client-credentials","authorization-code","jwt-bearer","token-exchange"]))}var re="medplum-cli",ae="http://localhost:9615",R=m("login"),U=m("whoami");R.action(async e=>{let t=await l(e);if(e.authType==="basic"){console.log("Basic authentication does not require login");return}await nt(t)});U.action(async e=>{let t=await l(e);it(t)});async function nt(e){await rt(e);let t=new URL(e.getAuthorizeUrl());t.searchParams.set("client_id",re),t.searchParams.set("redirect_uri",ae),t.searchParams.set("scope","openid"),t.searchParams.set("response_type","code"),t.searchParams.set("prompt","login"),await at(t.toString())}async function rt(e){let t=tt(async(o,n)=>{let a=new URL(o.url,"http://localhost:9615"),i=a.searchParams.get("code");if(a.pathname==="/"&&i)try{let s=await e.processCode(i,{clientId:re,redirectUri:ae});n.writeHead(200,{"Content-Type":T.TEXT}),n.end(`Signed in as ${Ze(s)}. You may close this window.`)}catch(s){n.writeHead(400,{"Content-Type":T.TEXT}),n.end(`Error: ${Qe(s)}`)}finally{t.close()}else n.writeHead(404,{"Content-Type":T.TEXT}),n.end("Not found")}).listen(9615)}async function at(e){let t=ot(),o;switch(t){case"openbsd":case"linux":o=`xdg-open '${e}'`;break;case"darwin":o=`open '${e}'`;break;case"win32":o=`cmd /c start "" "${e}"`;break;default:throw new Error("Unsupported platform: "+t)}et(o)}function it(e){let t=e.getActiveLogin();t?(console.log(`Server: ${e.getBaseUrl()}`),console.log(`Profile: ${t.profile.display} (${t.profile.reference})`),console.log(`Project: ${t.project.display} (${t.project.reference})`)):console.log("Not logged in")}import{Command as fo}from"commander";import{CloudFormationClient as st,DescribeStackResourcesCommand as ct,DescribeStacksCommand as mt,ListStacksCommand as lt}from"@aws-sdk/client-cloudformation";import{CloudFrontClient as dt}from"@aws-sdk/client-cloudfront";import{ECSClient as ut}from"@aws-sdk/client-ecs";import{S3Client as pt}from"@aws-sdk/client-s3";var O=new st({}),ie=new dt({}),se=new ut({}),ce=new pt({}),ft="medplum:environment";async function B(){return(await O.send(new lt({}))).StackSummaries?.filter(t=>t.StackName&&t.StackStatus!=="DELETE_COMPLETE")||[]}async function b(e){let t=await B();for(let o of t){let n=o.StackName,a=await F(n);if(a?.tag===e)return a}}async function F(e){let t=new mt({StackName:e}),n=(await O.send(t))?.Stacks?.[0],a=n?.Tags?.find(c=>c.Key===ft);if(!a)return;let i=await O.send(new ct({StackName:e}));if(!i.StackResources)return;let s={stack:n,tag:a.Value};for(let c of i.StackResources)c.ResourceType==="AWS::ECS::Cluster"?s.ecsCluster=c:c.ResourceType==="AWS::ECS::Service"?s.ecsService=c:c.ResourceType==="AWS::S3::Bucket"&&c.LogicalResourceId?.startsWith("FrontEndAppBucket")?s.appBucket=c:c.ResourceType==="AWS::S3::Bucket"&&c.LogicalResourceId?.startsWith("StorageStorageBucket")?s.storageBucket=c:c.ResourceType==="AWS::CloudFront::Distribution"&&c.LogicalResourceId?.startsWith("FrontEndAppDistribution")&&(s.appDistribution=c);return s}function k(e){console.log(`Medplum Tag: ${e.tag}`),console.log(`Stack Name: ${e.stack.StackName}`),console.log(`Stack ID: ${e.stack.StackId}`),console.log(`Status: ${e.stack.StackStatus}`),console.log(`ECS Cluster: ${e.ecsCluster?.PhysicalResourceId}`),console.log(`ECS Service: ${$(e.ecsService)}`),console.log(`App Bucket: ${e.appBucket?.PhysicalResourceId}`),console.log(`Storage Bucket: ${e.storageBucket?.PhysicalResourceId}`)}function $(e){return e?.PhysicalResourceId?.split("/")?.pop()||""}async function me(e){let t=await b(e);if(!t){console.log("Stack not found");return}k(t)}import{ACMClient as de,ListCertificatesCommand as gt,RequestCertificateCommand as yt}from"@aws-sdk/client-acm";import{GetParameterCommand as ht,PutParameterCommand as St,SSMClient as wt}from"@aws-sdk/client-ssm";import{GetCallerIdentityCommand as Ct,STSClient as bt}from"@aws-sdk/client-sts";import{generateKeyPairSync as vt,randomUUID as Et}from"crypto";import{existsSync as Mt,writeFileSync as Pt}from"fs";import{resolve as kt}from"path";import At from"readline";var Nt=e=>`${e}DomainName`,ue=e=>`${e}SslCertArn`,N;async function pe(){let e={apiPort:8103,region:"us-east-1"};N=At.createInterface({input:process.stdin,output:process.stdout}),d("MEDPLUM"),r("This tool prepares the necessary prerequisites for deploying Medplum in your AWS account."),r(""),r("Most Medplum infrastructure is deployed using the AWS CDK."),r("However, some AWS resources must be created manually, such as email addresses and SSL certificates."),r("This tool will help you create those resources."),r(""),r("Upon completion, this tool will:"),r(" 1. Generate a Medplum CDK config file (i.e., medplum.demo.config.json)"),r(" 2. Optionally generate an AWS CloudFront signing key"),r(" 3. Optionally request SSL certificates from AWS Certificate Manager"),r(" 4. Optionally write server config settings to AWS Parameter Store"),r(""),r("The Medplum infra config file is an input to the Medplum CDK."),r("The Medplum CDK will create and manage the necessary AWS resources."),r(""),r("We will ask a series of questions to generate your infra config file."),r("Some questions have predefined options in [square brackets]."),r("Some questions have default values in (parentheses), which you can accept by pressing Enter."),r("Press Ctrl+C at any time to exit.");let t=await xt(e.region);t||(r("It appears that you do not have AWS credentials configured."),r("AWS credentials are not strictly required, but will enable some additional features."),r("If you intend to use AWS credentials, please configure them now."),await A("Do you want to continue without AWS credentials?")),d("ENVIRONMENT NAME"),r('Medplum deployments have a short environment name such as "prod", "staging", "alice", or "demo".'),r("The environment name is used in multiple places:"),r(" 1. As part of config file names (i.e., medplum.demo.config.json)"),r(" 2. As the base of CloudFormation stack names (i.e., MedplumDemo)"),r(" 3. AWS Parameter Store keys (i.e., /medplum/demo/...)"),e.name=await g("What is your environment name?","demo"),r('Using environment name "'+e.name+'"...'),d("CONFIG FILE"),r("Medplum Infrastructure will create a config file in the current directory.");let o=await g("What is the config file name?",`medplum.${e.name}.config.json`);Mt(o)&&(r("Config file already exists."),await A("Do you want to overwrite the config file?")),r('Using config file "'+o+'"...'),p(o,e),d("AWS REGION"),r("Most Medplum resources will be created in a single AWS region."),e.region=await g("Enter your AWS region:","us-east-1"),p(o,e),d("AWS ACCOUNT NUMBER"),r("Medplum Infrastructure will use your AWS account number to create AWS resources."),t&&r("Using the AWS CLI, your current account ID is: "+t),e.accountNumber=await g("What is your AWS account number?",t),p(o,e),d("STACK NAME"),r("Medplum will create a CloudFormation stack to manage AWS resources."),r("AWS CloudFormation stack names ");let n="Medplum"+e.name.charAt(0).toUpperCase()+e.name.slice(1);for(e.stackName=await g("Enter your CloudFormation stack name?",n),p(o,e),d("BASE DOMAIN NAME"),r("Please enter the base domain name for your Medplum deployment."),r(""),r("Medplum deploys multiple subdomains for various services."),r(""),r('For example, "api." for the REST API and "app." for the web application.'),r("The base domain name is the common suffix for all subdomains."),r(""),r('For example, if your base domain name is "example.com",'),r('then the REST API will be "api.example.com".'),r(""),r('The base domain should include the TLD (i.e., ".com", ".org", ".net").'),r(""),r("Note that you must own the base domain, and it must use Route53 DNS.");!e.domainName;)e.domainName=await g("Enter your base domain name:");p(o,e),d("SUPPORT EMAIL"),r("Medplum sends transactional emails to users."),r("For example, emails to new users or for password reset."),r("Medplum will use the support email address to send these emails."),r("Note that you must verify the support email address in SES.");let a=await g("Enter your support email address:");d("API DOMAIN NAME"),r("Medplum deploys a REST API for the backend services."),e.apiDomainName=await g("Enter your REST API domain name:","api."+e.domainName),e.baseUrl=`https://${e.apiDomainName}/`,p(o,e),d("APP DOMAIN NAME"),r("Medplum deploys a web application for the user interface."),e.appDomainName=await g("Enter your web application domain name:","app."+e.domainName),p(o,e),d("STORAGE DOMAIN NAME"),r("Medplum deploys a storage service for file uploads."),e.storageDomainName=await g("Enter your storage domain name:","storage."+e.domainName),p(o,e),d("STORAGE BUCKET"),r("Medplum uses an S3 bucket to store binary content such as file uploads."),r("Medplum will create a the S3 bucket as part of the CloudFormation stack."),e.storageBucketName=await g("Enter your storage bucket name:","medplum-"+e.name+"-storage"),p(o,e),d("MAX AVAILABILITY ZONES"),r("Medplum API servers can be deployed in multiple availability zones."),r("This provides redundancy and high availability."),r("However, it also increases the cost of the deployment."),r("If you want to use all availability zones, choose a large number such as 99."),r("If you want to restrict the number, for example to manage EIP limits,"),r("then choose a small number such as 1 or 2."),e.maxAzs=await E("Enter the maximum number of availability zones:",[1,2,3,99],2),d("DATABASE INSTANCES"),r("Medplum uses a relational database to store data."),r("You can set up your own database,"),r("or Medplum can create a new RDS database as part of the CloudFormation stack."),await L("Do you want to create a new RDS database as part of the CloudFormation stack?")?(r("Medplum will create a new RDS database as part of the CloudFormation stack."),r(""),r("If you need high availability, you can choose multiple instances."),r("Use 1 for a single instance, or 2 for a primary and a standby."),e.rdsInstances=await E("Enter the number of database instances:",[1,2],1)):(r("Medplum will not create a new RDS database."),r("Please create a new RDS database and enter the database name, username, and password."),r('Set the AWS Secrets Manager secret ARN in the config file in the "rdsSecretsArn" setting.'),e.rdsSecretsArn="TODO"),p(o,e),d("SERVER INSTANCES"),r("Medplum uses AWS Fargate to run the API servers."),r("Medplum will create a new Fargate cluster as part of the CloudFormation stack."),r("Fargate will automatically scale the number of servers up and down."),r("If you need high availability, you can choose multiple instances."),e.desiredServerCount=await E("Enter the number of server instances:",[1,2,3,4,6,8],1),p(o,e),d("SERVER MEMORY"),r("You can choose the amount of memory for each server instance."),r("The default is 512 MB, which is sufficient for getting started."),r("Note that only certain CPU units are compatible with memory units."),r('Consult AWS Fargate "Task Definition Parameters" for more information.'),e.serverMemory=await E("Enter the server memory (MB):",[512,1024,2048,4096,8192,16384],512),p(o,e),d("SERVER CPU"),r("You can choose the amount of CPU for each server instance."),r("CPU is expressed as an integer using AWS CPU units"),r("The default is 256, which is sufficient for getting started."),r("Note that only certain CPU units are compatible with memory units."),r('Consult AWS Fargate "Task Definition Parameters" for more information.'),e.serverCpu=await E("Enter the server CPU:",[256,512,1024,2048,4096,8192,16384],256),p(o,e),d("SERVER IMAGE"),r("Medplum uses Docker images for the API servers."),r("You can choose the image to use for the servers."),r("Docker images can be loaded from either Docker Hub or AWS ECR."),r("The default is the latest Medplum release."),e.serverImage=await g("Enter the server image:","medplum/medplum-server:latest"),p(o,e),d("SIGNING KEY"),r("Medplum uses AWS CloudFront Presigned URLs for binary content such as file uploads.");let{privateKey:i,publicKey:s,passphrase:c}=Rt();e.storagePublicKey=s,p(o,e),d("SSL CERTIFICATES"),r("Medplum will now check for existing SSL certificates for the subdomains.");let u=await Dt(e.region);r("Found "+u.length+" certificate(s).");for(let{region:v,certName:h}of[{region:e.region,certName:"api"},{region:"us-east-1",certName:"app"},{region:"us-east-1",certName:"storage"}]){r("");let P=await It(e,u,v,h);e[ue(h)]=P,p(o,e)}d("AWS PARAMETER STORE"),r("Medplum uses AWS Parameter Store to store sensitive configuration values."),r("These values will be encrypted at rest."),r(`The values will be stored in the "/medplum/${e.name}" path.`);let f={port:e.apiPort,baseUrl:e.baseUrl,appBaseUrl:`https://${e.appDomainName}/`,storageBaseUrl:`https://${e.storageDomainName}/binary/`,binaryStorage:`s3:${e.storageBucketName}`,signingKey:i,signingKeyPassphrase:c,supportEmail:a};r(JSON.stringify({...f,signingKey:"****",signingKeyPassphrase:"****"},null,2)),await A("Do you want to store these values in AWS Parameter Store?"),await Bt(e.region,`/medplum/${e.name}/`,f),d("DONE!"),r("Medplum configuration complete."),r("You can now proceed to deploying the Medplum infrastructure with CDK."),r("Run:"),r(""),r(` npx cdk bootstrap -c config=${o}`),r(` npx cdk synth -c config=${o}`),e.region==="us-east-1"?r(` npx cdk deploy -c config=${o}`):r(` npx cdk deploy -c config=${o} --all`),r(""),r("See Medplum documentation for more information:"),r(""),r(" https://www.medplum.com/docs/self-hosting/install-on-aws"),r(""),N.close()}function r(e){N.write(e+`
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`)}function f(e,t=""){return new Promise(o=>{x.question(e+(t?" ("+t+")":"")+" ",n=>{o(n||t.toString())})})}async function F(e,t,o=""){let n=e+" ["+t.map(a=>a===o?"("+a+")":a).join("|")+"]";for(;;){let a=await f(n)||o;if(t.includes(a))return a;r("Please choose one of the following options: "+t.join(", "))}}async function E(e,t,o){return parseInt(await F(e,t.map(n=>n.toString()),o.toString()),10)}async function O(e){return(await F(e,["y","n"])).toLowerCase()==="y"}async function P(e){if(!await O(e))throw r("Exiting..."),new Error("User cancelled")}function p(e,t){bt(vt(e),JSON.stringify(t,void 0,2),"utf-8")}async function kt(e){try{let t=new ht({region:e}),o=new yt({});return(await t.send(o)).Account}catch(t){console.log("Warning: Unable to get AWS account ID",t.message);return}}async function Pt(e){let t=await se(e);if(e!=="us-east-1"){let o=await se("us-east-1");t.push(...o)}return t}async function se(e){try{let t=new ce({region:e}),o=new dt({MaxItems:1e3});return(await t.send(o)).CertificateSummaryList}catch(t){return console.log("Warning: Unable to list certificates",t.message),[]}}async function xt(e,t,o,n){let a=e[Mt(n)],i=t.find(c=>c.CertificateArn?.includes(o)&&c.DomainName===a);if(i)return r(`Found existing certificate for "${a}" in "${o}.`),i.CertificateArn;if(r(`No existing certificate found for "${a}" in "${o}.`),!await O("Do you want to request a new certificate?"))return r(`Please add your certificate ARN to the config file in the "${me(n)}" setting.`),"TODO";let s=await Nt(o,a);return r("Certificate ARN: "+s),s}async function Nt(e,t){try{let o=await F("Validate certificate using DNS or email validation?",["dns","email"],"dns"),n=new ce({region:e}),a=new ut({DomainName:t,ValidationMethod:o.toUpperCase()});return(await n.send(a)).CertificateArn}catch(o){return console.log("Error: Unable to request certificate",o.message),"TODO"}}function At(){let e=wt(),t=St("rsa",{modulusLength:2048,publicKeyEncoding:{type:"spki",format:"pem"},privateKeyEncoding:{type:"pkcs1",format:"pem",cipher:"aes-256-cbc",passphrase:e}});return{publicKey:t.publicKey,privateKey:t.privateKey,passphrase:e}}async function Dt(e,t){let o=new pt({Name:t,WithDecryption:!0});try{return(await e.send(o)).Parameter?.Value}catch(n){if(n.name==="ParameterNotFound")return;throw n}}async function It(e,t,o){let n=new ft({Name:t,Value:o,Type:"SecureString",Overwrite:!0});await e.send(n)}async function Rt(e,t,o){let n=new gt({region:e});for(let[a,i]of Object.entries(o)){let s=t+a,c=i.toString(),u=await Dt(n,s);u!==void 0&&u!==c&&(r(`Parameter "${s}" exists with different value.`),await P(`Do you want to overwrite "${s}"?`)),await It(n,s,c)}}async function de(){let e=await U();for(let t of e){let o=t.StackName,n=await B(o);n&&(k(n),console.log(""))}}import{CreateInvalidationCommand as Kt}from"@aws-sdk/client-cloudfront";import{PutObjectCommand as qt}from"@aws-sdk/client-s3";import zt from"fast-glob";import{createReadStream as Gt,mkdtempSync as Ht,readdirSync as Vt,readFileSync as Jt,rmSync as Yt,writeFileSync as Xt}from"fs";import ge from"node-fetch";import{tmpdir as Zt}from"os";import{join as A,sep as Qt}from"path";import{pipeline as eo}from"stream/promises";import{existsSync as Tt,readFileSync as Ut,writeFile as Bt}from"fs";import{basename as jt,extname as Ft,resolve as Ot}from"path";import $t from"tar";function h(e){console.log(JSON.stringify(e,null,2))}async function $(e,t,o){let n=t.source,a=W(n);if(a)try{console.log("Saving source code...");let i=await e.createAttachment(a,jt(n),_t(n));console.log("Updating bot.....");let s=await e.updateResource({...o,sourceCode:i});console.log("Success! New bot version: "+s.meta?.versionId)}catch(i){console.log("Update error: ",i)}}async function ue(e,t,o){let n=t.dist??t.source,a=W(n);if(a)try{console.log("Deploying bot...");let i=await e.post(e.fhirUrl("Bot",o.id,"$deploy"),{code:a});console.log("Deploy result: "+i.issue?.[0]?.details?.text)}catch(i){console.log("Deploy error: ",i)}}async function L(e,t){if(t.length<4){console.log("Error: command needs to be npx medplum <new-bot-name> <project-id> <source-file> <dist-file>");return}let o=t[0],n=t[1],a=t[2],i=t[3];try{let s={name:o,description:""},c=await e.post("admin/projects/"+n+"/bot",s),u=await e.readResource("Bot",c.id),g={name:o,id:c.id,source:a,dist:i};await $(e,g,u),console.log(`Success! Bot created: ${u.id}`),Lt(g)}catch(s){console.log("Error while creating new bot: "+s)}}function pe(e){let t=new RegExp("^"+Wt(e).replace(/\\\*/g,".*")+"$"),o=N()?.bots?.filter(n=>t.test(n.name));return o||[]}function N(e){let t=e?`medplum.${e}.config.json`:"medplum.config.json",o=W(t);if(o)return JSON.parse(o)}function W(e){let t=Ot(process.cwd(),e);return Tt(t)?Ut(t,"utf8"):(console.log("Error: File does not exist: "+t),"")}function Lt(e){let t=N();t?.bots?.push(e),Bt("medplum.config.json",JSON.stringify(t),()=>{console.log(`Bot added to config: ${e.id}`)})}function Wt(e){return e.replace(/[/\-\\^$*+?.()|[\]{}]/g,"\\$&")}function fe(e){let n=0,a=0;return $t.x({cwd:e,filter:(i,s)=>{if(n++,n>100)throw new Error("Tar extractor reached max number of files");if(a+=s.size,a>10485760)throw new Error("Tar extractor reached max size");return!0}})}function _(){return{extension:[{url:"http://hl7.org/fhir/StructureDefinition/data-absent-reason",valueCode:"unsupported"}]}}function _t(e){let t=Ft(e).toLowerCase();return[".cjs",".mjs",".js"].includes(t)?"text/javascript":[".cts",".mts",".ts"].includes(t)?"text/typescript":"text/plain"}async function ye(e){let t=N(e);if(!t){console.log("Config not found");return}let o=await v(e);if(!o){console.log("Stack not found");return}let n=o.appBucket;if(!n){console.log("App bucket not found");return}let a=await oo("@medplum/app","latest");he(a,{MEDPLUM_BASE_URL:t.baseUrl,MEDPLUM_CLIENT_ID:t.clientId??"",GOOGLE_CLIENT_ID:t.googleClientId??"",RECAPTCHA_SITE_KEY:t.recaptchaSiteKey??"",MEDPLUM_REGISTER_ENABLED:t.registerEnabled?"true":"false"}),await ro(a,n.PhysicalResourceId),o.appDistribution?.PhysicalResourceId&&await so(o.appDistribution.PhysicalResourceId),console.log("Done")}async function to(e,t){let o=`https://registry.npmjs.org/${e}/${t}`;return(await ge(o)).json()}async function oo(e,t){let n=(await to(e,t)).dist.tarball,a=Ht(A(Zt(),"tarball-"));try{let i=await ge(n),s=fe(a);return await eo(i.body,s),A(a,"package","dist")}catch(i){throw Yt(a,{recursive:!0,force:!0}),i}}function he(e,t){for(let o of Vt(e,{withFileTypes:!0})){let n=A(e,o.name);o.isDirectory()?he(n,t):o.isFile()&&n.endsWith(".js")&&no(n,t)}}function no(e,t){let o=Jt(e,"utf-8");for(let[n,a]of Object.entries(t))o=o.replaceAll(`__${n}__`,a);Xt(e,o)}async function ro(e,t){let o=[["css/**/*.css","text/css",!0],["css/**/*.css.map","application/json",!0],["img/**/*.png","image/png",!0],["img/**/*.svg","image/svg+xml",!0],["js/**/*.js","text/javascript",!0],["js/**/*.js.map","application/json",!0],["js/**/*.txt","text/plain",!0],["favicon.ico","image/vnd.microsoft.icon",!0],["robots.txt","text/plain",!0],["workbox-*.js","text/javascript",!0],["workbox-*.js.map","application/json",!0],["manifest.webmanifest","application/manifest+json",!1],["service-worker.js","text/javascript",!1],["service-worker.js.map","application/json",!1],["index.html","text/html",!1]];for(let n of o)await ao({rootDir:e,bucketName:t,fileNamePattern:n[0],contentType:n[1],cached:n[2]})}async function ao(e){let t=zt.sync(e.fileNamePattern,{cwd:e.rootDir});for(let o of t)await io(A(e.rootDir,o),e)}async function io(e,t){let o=Gt(e),n=e.substring(t.rootDir.length+1).split(Qt).join("/"),a={Bucket:t.bucketName,Key:n,Body:o,ContentType:t.contentType,CacheControl:t.cached?"public, max-age=31536000":"no-cache, no-store, must-revalidate"};console.log(`Uploading ${n} to ${t.bucketName}...`),await ae.send(new qt(a))}async function so(e){let t=await ne.send(new Kt({DistributionId:e,InvalidationBatch:{CallerReference:`invalidate-all-${Date.now()}`,Paths:{Quantity:1,Items:["/*"]}}}));console.log(`Created invalidation with ID: ${t.Invalidation?.Id}`)}import{UpdateServiceCommand as co}from"@aws-sdk/client-ecs";async function Se(e){let t=await v(e);if(!t){console.log("Stack not found");return}let o=t.ecsCluster?.PhysicalResourceId;if(!o){console.log("ECS Cluster not found");return}let n=j(t.ecsService);if(!n){console.log("ECS Service not found");return}await re.send(new co({cluster:o,service:n,forceNewDeployment:!0})),console.log(`Service "${n}" updated successfully.`)}var b=new mo("aws").description("Commands to manage AWS resources");b.command("init").description("Initialize a new Medplum AWS CloudFormation stacks").action(le);b.command("list").description("List Medplum AWS CloudFormation stacks").action(de);b.command("describe").description("Describe a Medplum AWS CloudFormation stack by tag").argument("<tag>").action(ie);b.command("update-server").alias("deploy-server").description("Update the server image").argument("<tag>").action(Se);b.command("update-app").alias("deploy-app").description("Update the app site").argument("<tag>").action(ye);import{Command as lo}from"commander";var we=m("save"),Ce=m("deploy"),be=m("create"),ve=new lo("bot").addCommand(we).addCommand(Ce).addCommand(be),K=m("save-bot"),q=m("deploy-bot"),z=m("create-bot");we.description("Saving the bot").argument("<botName>").action(async(e,t)=>{let o=await l(t);await D(o,e)});Ce.description("Deploy the app to AWS").argument("<botName>").action(async(e,t)=>{let o=await l(t);await D(o,e,!0)});be.arguments("<botName> <projectId> <sourceFile> <distFile>").description("Creating a bot").action(async(e,t,o,n,a)=>{let i=await l(a);await L(i,[e,t,o,n])});async function D(e,t,o=!1){let n=pe(t);for(let a of n){let i=await e.readResource("Bot",a.id);await $(e,a,i),o&&await ue(e,a,i)}console.log(`Number of bots deployed: ${n.length}`)}K.description("Saves the bot").argument("<botName>").action(async(e,t)=>{let o=await l(t);await D(o,e)});q.description("Deploy the bot to AWS").argument("<botName>").action(async(e,t)=>{let o=await l(t);await D(o,e,!0)});z.arguments("<botName> <projectId> <sourceFile> <distFile>").description("Creates and saves the bot").action(async(e,t,o,n,a)=>{let i=await l(a);await L(i,[e,t,o,n])});import{Command as uo}from"commander";import{createReadStream as po,writeFile as fo}from"fs";import{resolve as Me}from"path";import{createInterface as go}from"readline";var ke=m("export"),Pe=m("import"),xe=new uo("bulk").addCommand(ke).addCommand(Pe);ke.option("-e, --export-level <exportLevel>",'Optional export level. Defaults to system level export. "Group/:id" - Group of Patients, "Patient" - All Patients.').option("-t, --types <types>","optional resource types to export").option("-s, --since <since>","optional Resources will be included in the response if their state has changed after the supplied time (e.g. if Resource.meta.lastUpdated is later than the supplied _since time).").option("-d, --target-directory <targetDirectory>","optional target directory to save files from the bulk export operations.").action(async e=>{let{exportLevel:t,types:o,since:n,targetDirectory:a}=e,i=await l(e);(await i.bulkExport(t,o,n)).output?.forEach(async({type:c,url:u})=>{let g=new URL(u),S=await i.download(u),w=`${c}_${g.pathname}`.replace(/[^a-zA-Z0-9]+/g,"_")+".ndjson",C=Me(a??"",w);fo(`${C}`,await S.text(),()=>{console.log(`${C} is created`)})})});Pe.argument("<filename>","File Name").option("--num-resources-per-request <numResourcesPerRequest>","optional number of resources to import per batch request. Defaults to 25.","25").option("--add-extensions-for-missing-values","optional flag to add extensions for missing values in a resource",!1).option("-d, --target-directory <targetDirectory>","optional target directory of file to be imported").action(async(e,t)=>{let{numResourcesPerRequest:o,addExtensionsForMissingValues:n,targetDirectory:a}=t,i=Me(a??process.cwd(),e),s=await l(t);await yo(i,parseInt(o,10),s,n)});async function yo(e,t,o,n){let a=[],i=po(e),s=go({input:i});for await(let c of s){let u=ho(c,n);a.push({resource:u,request:{method:"POST",url:u.resourceType}}),a.length%t===0&&(await Ee(a,o),a=[])}a.length>0&&await Ee(a,o)}async function Ee(e,t){(await t.executeBatch({resourceType:"Bundle",type:"transaction",entry:e})).entry?.forEach(n=>{h(n.response)})}function ho(e,t){let o=JSON.parse(e);return t?So(o):o}function So(e){return e.resourceType==="ExplanationOfBenefit"?wo(e):e}function wo(e){return e.provider||(e.provider=_()),e.item?.forEach(t=>{t?.productOrService||(t.productOrService=_())}),e}import{Command as Co,Option as bo}from"commander";var Ne=m("list"),Ae=m("current"),De=m("switch"),Ie=m("invite"),Re=new Co("project").addCommand(Ne).addCommand(Ae).addCommand(De).addCommand(Ie);Ne.description("List of current projects").action(async e=>{let t=await l(e);vo(t)});function vo(e){let o=e.getLogins().map(n=>`${n.project.display} (${n.project.reference})`).join(`
|
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5
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+
`)}function g(e,t=""){return new Promise(o=>{N.question(e+(t?" ("+t+")":"")+" ",n=>{o(n||t.toString())})})}async function j(e,t,o=""){let n=e+" ["+t.map(a=>a===o?"("+a+")":a).join("|")+"]";for(;;){let a=await g(n)||o;if(t.includes(a))return a;r("Please choose one of the following options: "+t.join(", "))}}async function E(e,t,o){return parseInt(await j(e,t.map(n=>n.toString()),o.toString()),10)}async function L(e){return(await j(e,["y","n"])).toLowerCase()==="y"}async function A(e){if(!await L(e))throw r("Exiting..."),new Error("User cancelled")}function p(e,t){Pt(kt(e),JSON.stringify(t,void 0,2),"utf-8")}async function xt(e){try{let t=new bt({region:e}),o=new Ct({});return(await t.send(o)).Account}catch(t){console.log("Warning: Unable to get AWS account ID",t.message);return}}async function Dt(e){let t=await le(e);if(e!=="us-east-1"){let o=await le("us-east-1");t.push(...o)}return t}async function le(e){try{let t=new de({region:e}),o=new gt({MaxItems:1e3});return(await t.send(o)).CertificateSummaryList}catch(t){return console.log("Warning: Unable to list certificates",t.message),[]}}async function It(e,t,o,n){let a=e[Nt(n)],i=t.find(c=>c.CertificateArn?.includes(o)&&c.DomainName===a);if(i)return r(`Found existing certificate for "${a}" in "${o}.`),i.CertificateArn;if(r(`No existing certificate found for "${a}" in "${o}.`),!await L("Do you want to request a new certificate?"))return r(`Please add your certificate ARN to the config file in the "${ue(n)}" setting.`),"TODO";let s=await Tt(o,a);return r("Certificate ARN: "+s),s}async function Tt(e,t){try{let o=await j("Validate certificate using DNS or email validation?",["dns","email"],"dns"),n=new de({region:e}),a=new yt({DomainName:t,ValidationMethod:o.toUpperCase()});return(await n.send(a)).CertificateArn}catch(o){return console.log("Error: Unable to request certificate",o.message),"TODO"}}function Rt(){let e=Et(),t=vt("rsa",{modulusLength:2048,publicKeyEncoding:{type:"spki",format:"pem"},privateKeyEncoding:{type:"pkcs1",format:"pem",cipher:"aes-256-cbc",passphrase:e}});return{publicKey:t.publicKey,privateKey:t.privateKey,passphrase:e}}async function Ut(e,t){let o=new ht({Name:t,WithDecryption:!0});try{return(await e.send(o)).Parameter?.Value}catch(n){if(n.name==="ParameterNotFound")return;throw n}}async function Ot(e,t,o){let n=new St({Name:t,Value:o,Type:"SecureString",Overwrite:!0});await e.send(n)}async function Bt(e,t,o){let n=new wt({region:e});for(let[a,i]of Object.entries(o)){let s=t+a,c=i.toString(),u=await Ut(n,s);u!==void 0&&u!==c&&(r(`Parameter "${s}" exists with different value.`),await A(`Do you want to overwrite "${s}"?`)),await Ot(n,s,c)}}async function fe(){let e=await B();for(let t of e){let o=t.StackName,n=await F(o);n&&(k(n),console.log(""))}}import{CreateInvalidationCommand as Gt}from"@aws-sdk/client-cloudfront";import{PutObjectCommand as Ht}from"@aws-sdk/client-s3";import{ContentType as y}from"@medplum/core";import Jt from"fast-glob";import{createReadStream as Xt,mkdtempSync as Yt,readdirSync as Zt,readFileSync as Qt,rmSync as eo,writeFileSync as to}from"fs";import Se from"node-fetch";import{tmpdir as oo}from"os";import{join as D,sep as no}from"path";import{pipeline as ro}from"stream/promises";import{ContentType as W}from"@medplum/core";import{existsSync as Ft,readFileSync as $t,writeFile as jt}from"fs";import{basename as Lt,extname as Wt,resolve as _t}from"path";import Kt from"tar";function w(e){console.log(JSON.stringify(e,null,2))}async function _(e,t,o){let n=t.source,a=q(n);if(a)try{console.log("Saving source code...");let i=await e.createAttachment(a,Lt(n),Vt(n));console.log("Updating bot.....");let s=await e.updateResource({...o,sourceCode:i});console.log("Success! New bot version: "+s.meta?.versionId)}catch(i){console.log("Update error: ",i)}}async function ge(e,t,o){let n=t.dist??t.source,a=q(n);if(a)try{console.log("Deploying bot...");let i=await e.post(e.fhirUrl("Bot",o.id,"$deploy"),{code:a});console.log("Deploy result: "+i.issue?.[0]?.details?.text)}catch(i){console.log("Deploy error: ",i)}}async function K(e,t){if(t.length<4){console.log("Error: command needs to be npx medplum <new-bot-name> <project-id> <source-file> <dist-file>");return}let o=t[0],n=t[1],a=t[2],i=t[3];try{let s={name:o,description:""},c=await e.post("admin/projects/"+n+"/bot",s),u=await e.readResource("Bot",c.id),f={name:o,id:c.id,source:a,dist:i};await _(e,f,u),console.log(`Success! Bot created: ${u.id}`),qt(f)}catch(s){console.log("Error while creating new bot: "+s)}}function ye(e){let t=new RegExp("^"+zt(e).replace(/\\\*/g,".*")+"$"),o=x()?.bots?.filter(n=>t.test(n.name));return o||[]}function x(e){let t=e?`medplum.${e}.config.json`:"medplum.config.json",o=q(t);if(o)return JSON.parse(o)}function q(e){let t=_t(process.cwd(),e);return Ft(t)?$t(t,"utf8"):(console.log("Error: File does not exist: "+t),"")}function qt(e){let t=x();t?.bots?.push(e),jt("medplum.config.json",JSON.stringify(t),()=>{console.log(`Bot added to config: ${e.id}`)})}function zt(e){return e.replace(/[/\-\\^$*+?.()|[\]{}]/g,"\\$&")}function he(e){let n=0,a=0;return Kt.x({cwd:e,filter:(i,s)=>{if(n++,n>100)throw new Error("Tar extractor reached max number of files");if(a+=s.size,a>10485760)throw new Error("Tar extractor reached max size");return!0}})}function z(){return{extension:[{url:"http://hl7.org/fhir/StructureDefinition/data-absent-reason",valueCode:"unsupported"}]}}function Vt(e){let t=Wt(e).toLowerCase();return[".cjs",".mjs",".js"].includes(t)?W.JAVASCRIPT:[".cts",".mts",".ts"].includes(t)?W.TYPESCRIPT:W.TEXT}async function we(e,t){let o=x(e);if(!o){console.log("Config not found");return}let n=await b(e);if(!n){console.log("Stack not found");return}let a=n.appBucket;if(!a){console.log("App bucket not found");return}let i=await io("@medplum/app","latest");Ce(i,{MEDPLUM_BASE_URL:o.baseUrl,MEDPLUM_CLIENT_ID:o.clientId??"",GOOGLE_CLIENT_ID:o.googleClientId??"",RECAPTCHA_SITE_KEY:o.recaptchaSiteKey??"",MEDPLUM_REGISTER_ENABLED:o.registerEnabled?"true":"false"}),await co(i,a.PhysicalResourceId,t),n.appDistribution?.PhysicalResourceId&&!t.dryrun&&await uo(n.appDistribution.PhysicalResourceId),console.log("Done")}async function ao(e,t){let o=`https://registry.npmjs.org/${e}/${t}`;return(await Se(o)).json()}async function io(e,t){let n=(await ao(e,t)).dist.tarball,a=Yt(D(oo(),"tarball-"));try{let i=await Se(n),s=he(a);return await ro(i.body,s),D(a,"package","dist")}catch(i){throw eo(a,{recursive:!0,force:!0}),i}}function Ce(e,t){for(let o of Zt(e,{withFileTypes:!0})){let n=D(e,o.name);o.isDirectory()?Ce(n,t):o.isFile()&&n.endsWith(".js")&&so(n,t)}}function so(e,t){let o=Qt(e,"utf-8");for(let[n,a]of Object.entries(t))o=o.replaceAll(`__${n}__`,a);to(e,o)}async function co(e,t,o){let n=[["assets/**/*.css",y.CSS,!0],["assets/**/*.css.map",y.JSON,!0],["assets/**/*.js",y.JAVASCRIPT,!0],["assets/**/*.js.map",y.JSON,!0],["assets/**/*.txt",y.TEXT,!0],["assets/**/*.ico",y.FAVICON,!0],["img/**/*.png",y.PNG,!0],["img/**/*.svg",y.SVG,!0],["robots.txt",y.TEXT,!0],["index.html",y.HTML,!1]];for(let a of n)await mo({rootDir:e,bucketName:t,fileNamePattern:a[0],contentType:a[1],cached:a[2],dryrun:o.dryrun})}async function mo(e){let t=Jt.sync(e.fileNamePattern,{cwd:e.rootDir});for(let o of t)await lo(D(e.rootDir,o),e)}async function lo(e,t){let o=Xt(e),n=e.substring(t.rootDir.length+1).split(no).join("/"),a={Bucket:t.bucketName,Key:n,Body:o,ContentType:t.contentType,CacheControl:t.cached?"public, max-age=31536000":"no-cache, no-store, must-revalidate"};console.log(`Uploading ${n} to ${t.bucketName}...`),t.dryrun||await ce.send(new Ht(a))}async function uo(e){let t=await ie.send(new Gt({DistributionId:e,InvalidationBatch:{CallerReference:`invalidate-all-${Date.now()}`,Paths:{Quantity:1,Items:["/*"]}}}));console.log(`Created invalidation with ID: ${t.Invalidation?.Id}`)}import{UpdateServiceCommand as po}from"@aws-sdk/client-ecs";async function be(e){let t=await b(e);if(!t){console.log("Stack not found");return}let o=t.ecsCluster?.PhysicalResourceId;if(!o){console.log("ECS Cluster not found");return}let n=$(t.ecsService);if(!n){console.log("ECS Service not found");return}await se.send(new po({cluster:o,service:n,forceNewDeployment:!0})),console.log(`Service "${n}" updated successfully.`)}var C=new fo("aws").description("Commands to manage AWS resources");C.command("init").description("Initialize a new Medplum AWS CloudFormation stacks").action(pe);C.command("list").description("List Medplum AWS CloudFormation stacks").action(fe);C.command("describe").description("Describe a Medplum AWS CloudFormation stack by tag").argument("<tag>").action(me);C.command("update-server").alias("deploy-server").description("Update the server image").argument("<tag>").action(be);C.command("update-app").alias("deploy-app").description("Update the app site").argument("<tag>").option("--dryrun","Displays the operations that would be performed using the specified command without actually running them.").action(we);import{Command as go}from"commander";var ve=m("save"),Ee=m("deploy"),Me=m("create"),Pe=new go("bot").addCommand(ve).addCommand(Ee).addCommand(Me),V=m("save-bot"),G=m("deploy-bot"),H=m("create-bot");ve.description("Saving the bot").argument("<botName>").action(async(e,t)=>{let o=await l(t);await I(o,e)});Ee.description("Deploy the app to AWS").argument("<botName>").action(async(e,t)=>{let o=await l(t);await I(o,e,!0)});Me.arguments("<botName> <projectId> <sourceFile> <distFile>").description("Creating a bot").action(async(e,t,o,n,a)=>{let i=await l(a);await K(i,[e,t,o,n])});async function I(e,t,o=!1){let n=ye(t);for(let a of n){let i=await e.readResource("Bot",a.id);await _(e,a,i),o&&await ge(e,a,i)}console.log(`Number of bots deployed: ${n.length}`)}V.description("Saves the bot").argument("<botName>").action(async(e,t)=>{let o=await l(t);await I(o,e)});G.description("Deploy the bot to AWS").argument("<botName>").action(async(e,t)=>{let o=await l(t);await I(o,e,!0)});H.arguments("<botName> <projectId> <sourceFile> <distFile>").description("Creates and saves the bot").action(async(e,t,o,n,a)=>{let i=await l(a);await K(i,[e,t,o,n])});import{Command as yo}from"commander";import{createReadStream as ho,writeFile as So}from"fs";import{resolve as Ae}from"path";import{createInterface as wo}from"readline";var Ne=m("export"),xe=m("import"),De=new yo("bulk").addCommand(Ne).addCommand(xe);Ne.option("-e, --export-level <exportLevel>",'Optional export level. Defaults to system level export. "Group/:id" - Group of Patients, "Patient" - All Patients.').option("-t, --types <types>","optional resource types to export").option("-s, --since <since>","optional Resources will be included in the response if their state has changed after the supplied time (e.g. if Resource.meta.lastUpdated is later than the supplied _since time).").option("-d, --target-directory <targetDirectory>","optional target directory to save files from the bulk export operations.").action(async e=>{let{exportLevel:t,types:o,since:n,targetDirectory:a}=e,i=await l(e);(await i.bulkExport(t,o,n)).output?.forEach(async({type:c,url:u})=>{let f=new URL(u),v=await i.download(u),h=`${c}_${f.pathname}`.replace(/[^a-zA-Z0-9]+/g,"_")+".ndjson",P=Ae(a??"",h);So(`${P}`,await v.text(),()=>{console.log(`${P} is created`)})})});xe.argument("<filename>","File Name").option("--num-resources-per-request <numResourcesPerRequest>","optional number of resources to import per batch request. Defaults to 25.","25").option("--add-extensions-for-missing-values","optional flag to add extensions for missing values in a resource",!1).option("-d, --target-directory <targetDirectory>","optional target directory of file to be imported").action(async(e,t)=>{let{numResourcesPerRequest:o,addExtensionsForMissingValues:n,targetDirectory:a}=t,i=Ae(a??process.cwd(),e),s=await l(t);await Co(i,parseInt(o,10),s,n)});async function Co(e,t,o,n){let a=[],i=ho(e),s=wo({input:i});for await(let c of s){let u=bo(c,n);a.push({resource:u,request:{method:"POST",url:u.resourceType}}),a.length%t===0&&(await ke(a,o),a=[])}a.length>0&&await ke(a,o)}async function ke(e,t){(await t.executeBatch({resourceType:"Bundle",type:"transaction",entry:e})).entry?.forEach(n=>{w(n.response)})}function bo(e,t){let o=JSON.parse(e);return t?vo(o):o}function vo(e){return e.resourceType==="ExplanationOfBenefit"?Eo(e):e}function Eo(e){return e.provider||(e.provider=z()),e.item?.forEach(t=>{t?.productOrService||(t.productOrService=z())}),e}import{Command as Mo,Option as Po}from"commander";var Ie=m("list"),Te=m("current"),Re=m("switch"),Ue=m("invite"),Oe=new Mo("project").addCommand(Ie).addCommand(Te).addCommand(Re).addCommand(Ue);Ie.description("List of current projects").action(async e=>{let t=await l(e);ko(t)});function ko(e){let o=e.getLogins().map(n=>`${n.project.display} (${n.project.reference})`).join(`
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6
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7
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-
`);console.log(o)}
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8
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-
`)):console.log(`Error: project ${t} not found. Make sure you are added as a user to this project`)}async function
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7
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`);console.log(o)}Te.description("Project you are currently on").action(async e=>{let o=(await l(e)).getActiveLogin();if(!o)throw new Error("Unauthenticated: run `npx medplum login` to login");console.log(`${o.project.display} (${o.project.reference})`)});Re.description("Switching to another project from the current one").argument("<projectId>").action(async(e,t)=>{let o=await l(t);await Ao(o,e)});Ue.description("Invite a member to your current project (run npx medplum project current to confirm)").arguments("<firstName> <lastName> <email>").option("--send-email","If you want to send the email when inviting the user").option("--admin","If the user you are inviting is an admin").addOption(new Po("-r, --role <role>","Role of user").choices(["Practitioner","Patient","RelatedPerson"]).default("Practitioner")).action(async(e,t,o,n)=>{let a=await l(n),i=a.getActiveLogin();if(!i)throw new Error("Unauthenticated: run `npx medplum login` to login");if(!i.project.reference)throw new Error("No current project to invite user to");let s=i.project.reference.split("/")[1],c={resourceType:n.role,firstName:e,lastName:t,email:o,sendEmail:!!n.sendEmail,admin:!!n.admin};await No(s,c,a)});async function Ao(e,t){let n=e.getLogins().find(a=>a.project.reference?.includes(t));n?(await e.setActiveLogin(n),console.log(`Switched to project ${t}
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`)):console.log(`Error: project ${t} not found. Make sure you are added as a user to this project`)}async function No(e,t,o){try{await o.invite(e,t),t.sendEmail&&console.log("Email sent"),console.log("See your users at https://app.medplum.com/admin/users")}catch(n){console.log("Error while sending invite "+n)}}import{convertToTransactionBundle as xo}from"@medplum/core";var J=m("delete"),X=m("get"),Y=m("patch"),Z=m("post"),Q=m("put");J.argument("<url>","Resource/$id").action(async(e,t)=>{let o=await l(t);w(await o.delete(M(e,t)))});X.argument("<url>","Resource/$id").option("--as-transaction","Print out the bundle as a transaction type").action(async(e,t)=>{let n=await(await l(t)).get(M(e,t));t.asTransaction?w(xo(n)):w(n)});Y.arguments("<url> <body>").action(async(e,t,o)=>{let n=await l(o);w(await n.patch(M(e,o),ee(t)))});Z.arguments("<url> <body>").action(async(e,t,o)=>{let n=await l(o);w(await n.post(M(e,o),ee(t)))});Q.arguments("<url> <body>").action(async(e,t,o)=>{let n=await l(o);w(await n.put(M(e,o),ee(t)))});function ee(e){if(e)try{return JSON.parse(e)}catch{return e}}function M(e,t){let o=["admin/","auth/","fhir/R4"],{fhirUrlPath:n}=t;return o.some(a=>e.startsWith(a))?e:n?`${n}/${e}`:"fhir/R4/"+e}import{Command as Do}from"commander";import{resolve as Io}from"path";import{readdirSync as To}from"fs";import{homedir as Ro}from"os";var Be=m("set"),Fe=m("remove"),$e=m("list"),je=m("describe"),Le=new Do("profile").addCommand(Be).addCommand(Fe).addCommand($e).addCommand(je);Be.argument("<profileName>","Name of the profile").description("Create a new profile or replace it with the given name and its associated properties").action(async(e,t)=>{new S(e).setObject("options",t),console.log(`${e} profile created`)});Fe.argument("<profileName>","Name of the profile").description("Remove a profile by name").action(async e=>{new S(e).setObject("options",void 0),console.log(`${e} profile removed`)});$e.description("List all profiles saved").action(async()=>{let e=Io(Ro(),".medplum"),t=To(e),o=[];t.forEach(n=>{let a=n.split(".")[0],s=new S(a).getObject("options");s&&o.push({profileName:a,profile:s})}),console.log(o)});je.argument("<profileName>","Name of the profile").description("Describes a profile").action(async e=>{let o=new S(e).getObject("options");console.log(o)});async function $o(e){try{let t=new Bo("medplum").description("Command to access Medplum CLI");t.version(Uo),t.addCommand(R),t.addCommand(U),t.addCommand(X),t.addCommand(Z),t.addCommand(Y),t.addCommand(Q),t.addCommand(J),t.addCommand(Oe),t.addCommand(De),t.addCommand(Pe),t.addCommand(V),t.addCommand(G),t.addCommand(H),t.addCommand(Le),t.addCommand(C),await t.parseAsync(e)}catch(t){console.error("Error: "+Oo(t))}}async function jo(){Fo.config(),await $o(process.argv)}te.main===module&&jo().catch(e=>console.error("Unhandled error:",e));export{$o as main,jo as run};
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