@medplum/cli 2.0.14 → 2.0.16

package/dist/cjs/index.cjs

@@ -1,145 +1,223 @@
 #!/usr/bin/env node
 'use strict';
 
+var commander = require('commander');
 var core = require('@medplum/core');
-var child_process = require('child_process');
-var dotenv = require('dotenv');
 var fs = require('fs');
-var http = require('http');
-var fetch = require('node-fetch');
 var os = require('os');
 var path = require('path');
+var dotenv = require('dotenv');
+var child_process = require('child_process');
+var http = require('http');
 
-/******************************************************************************
-Copyright (c) Microsoft Corporation.
-
-Permission to use, copy, modify, and/or distribute this software for any
-purpose with or without fee is hereby granted.
-
-THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES WITH
-REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY
-AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY SPECIAL, DIRECT,
-INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM
-LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR
-OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
-PERFORMANCE OF THIS SOFTWARE.
-***************************************************************************** */
-
-function __classPrivateFieldGet(receiver, state, kind, f) {
-    if (kind === "a" && !f) throw new TypeError("Private accessor was defined without a getter");
-    if (typeof state === "function" ? receiver !== state || !f : !state.has(receiver)) throw new TypeError("Cannot read private member from an object whose class did not declare it");
-    return kind === "m" ? f : kind === "a" ? f.call(receiver) : f ? f.value : state.get(receiver);
-}
-
-function __classPrivateFieldSet(receiver, state, value, kind, f) {
-    if (kind === "m") throw new TypeError("Private method is not writable");
-    if (kind === "a" && !f) throw new TypeError("Private accessor was defined without a setter");
-    if (typeof state === "function" ? receiver !== state || !f : !state.has(receiver)) throw new TypeError("Cannot write private member to an object whose class did not declare it");
-    return (kind === "a" ? f.call(receiver, value) : f ? f.value = value : state.set(receiver, value)), value;
-}
-
-var _FileSystemStorage_instances, _FileSystemStorage_dirName, _FileSystemStorage_fileName, _FileSystemStorage_readFile, _FileSystemStorage_writeFile;
 class FileSystemStorage extends core.ClientStorage {
     constructor() {
         super();
-        _FileSystemStorage_instances.add(this);
-        _FileSystemStorage_dirName.set(this, void 0);
-        _FileSystemStorage_fileName.set(this, void 0);
-        __classPrivateFieldSet(this, _FileSystemStorage_dirName, path.resolve(os.homedir(), '.medplum'), "f");
-        __classPrivateFieldSet(this, _FileSystemStorage_fileName, path.resolve(__classPrivateFieldGet(this, _FileSystemStorage_dirName, "f"), 'credentials'), "f");
+        this.dirName = path.resolve(os.homedir(), '.medplum');
+        this.fileName = path.resolve(this.dirName, 'credentials');
     }
     clear() {
-        __classPrivateFieldGet(this, _FileSystemStorage_instances, "m", _FileSystemStorage_writeFile).call(this, {});
+        this.writeFile({});
     }
     getString(key) {
-        return __classPrivateFieldGet(this, _FileSystemStorage_instances, "m", _FileSystemStorage_readFile).call(this)?.[key];
+        return this.readFile()?.[key];
     }
     setString(key, value) {
-        const data = __classPrivateFieldGet(this, _FileSystemStorage_instances, "m", _FileSystemStorage_readFile).call(this) || {};
+        const data = this.readFile() || {};
         if (value) {
             data[key] = value;
         }
         else {
             delete data[key];
         }
-        __classPrivateFieldGet(this, _FileSystemStorage_instances, "m", _FileSystemStorage_writeFile).call(this, data);
+        this.writeFile(data);
     }
-}
-_FileSystemStorage_dirName = new WeakMap(), _FileSystemStorage_fileName = new WeakMap(), _FileSystemStorage_instances = new WeakSet(), _FileSystemStorage_readFile = function _FileSystemStorage_readFile() {
-    if (fs.existsSync(__classPrivateFieldGet(this, _FileSystemStorage_fileName, "f"))) {
-        return JSON.parse(fs.readFileSync(__classPrivateFieldGet(this, _FileSystemStorage_fileName, "f"), 'utf8'));
+    readFile() {
+        if (fs.existsSync(this.fileName)) {
+            return JSON.parse(fs.readFileSync(this.fileName, 'utf8'));
+        }
+        return undefined;
     }
-    return undefined;
-}, _FileSystemStorage_writeFile = function _FileSystemStorage_writeFile(data) {
-    if (!fs.existsSync(__classPrivateFieldGet(this, _FileSystemStorage_dirName, "f"))) {
-        fs.mkdirSync(__classPrivateFieldGet(this, _FileSystemStorage_dirName, "f"));
+    writeFile(data) {
+        if (!fs.existsSync(this.dirName)) {
+            fs.mkdirSync(this.dirName);
+        }
+        fs.writeFileSync(this.fileName, JSON.stringify(data, null, 2), 'utf8');
     }
-    fs.writeFileSync(__classPrivateFieldGet(this, _FileSystemStorage_fileName, "f"), JSON.stringify(data, null, 2), 'utf8');
-};
+}
 
-const clientId = 'medplum-cli';
-const redirectUri = 'http://localhost:9615';
-async function main(medplum, argv) {
-    if (argv.length < 3) {
-        console.log('Usage: medplum <command>');
+function prettyPrint(input) {
+    console.log(JSON.stringify(input, null, 2));
+}
+async function saveBot(medplum, botConfig, bot) {
+    const code = readFileContents(botConfig.source);
+    if (!code) {
         return;
     }
-    // Legacy support for MEDPLUM_CLIENT_ID and MEDPLUM_CLIENT_SECRET environment variables
-    const clientId = process.env['MEDPLUM_CLIENT_ID'];
-    const clientSecret = process.env['MEDPLUM_CLIENT_SECRET'];
-    if (clientId && clientSecret) {
-        await medplum.startClientLogin(clientId, clientSecret);
-    }
     try {
-        const command = argv[2].toLowerCase();
-        switch (command) {
-            //
-            // Auth commands
-            //
-            case 'login':
-                await startLogin(medplum);
-                break;
-            case 'whoami':
-                printMe(medplum);
-                break;
-            //
-            // REST commands
-            //
-            case 'delete':
-                prettyPrint(await medplum.delete(cleanUrl(argv[3])));
-                break;
-            case 'get':
-                prettyPrint(await medplum.get(cleanUrl(argv[3])));
-                break;
-            case 'patch':
-                prettyPrint(await medplum.patch(cleanUrl(argv[3]), parseBody(argv[4])));
-                break;
-            case 'post':
-                prettyPrint(await medplum.post(cleanUrl(argv[3]), parseBody(argv[4])));
-                break;
-            case 'put':
-                prettyPrint(await medplum.put(cleanUrl(argv[3]), parseBody(argv[4])));
-                break;
-            //
-            // Bot commands
-            //
-            case 'save-bot':
-                await runBotCommands(medplum, argv, ['save']);
-                break;
-            case 'deploy-bot':
-                await runBotCommands(medplum, argv, ['save', 'deploy']);
-                break;
-            case 'create-bot':
-                await createBot(medplum, argv);
-                break;
-            default:
-                console.log(`Unknown command: ${command}`);
+        console.log('Update bot code.....');
+        const updateResult = await medplum.updateResource({
+            ...bot,
+            code,
+        });
+        if (!updateResult) {
+            console.log('Bot not modified');
+        }
+        else {
+            console.log('Success! New bot version: ' + updateResult.meta?.versionId);
         }
     }
     catch (err) {
-        console.error('Error: ' + core.normalizeErrorString(err));
+        console.log('Update error: ', err);
+    }
+}
+async function deployBot(medplum, botConfig, bot) {
+    const code = readFileContents(botConfig.dist ?? botConfig.source);
+    if (!code) {
+        return;
+    }
+    try {
+        console.log('Deploying bot...');
+        const deployResult = (await medplum.post(medplum.fhirUrl('Bot', bot.id, '$deploy'), {
+            code,
+        }));
+        console.log('Deploy result: ' + deployResult.issue?.[0]?.details?.text);
+    }
+    catch (err) {
+        console.log('Deploy error: ', err);
     }
 }
+async function createBot(medplum, argv) {
+    if (argv.length < 4) {
+        console.log(`Error: command needs to be npx medplum <new-bot-name> <project-id> <source-file> <dist-file>`);
+        return;
+    }
+    const botName = argv[0];
+    const projectId = argv[1];
+    const sourceFile = argv[2];
+    const distFile = argv[3];
+    try {
+        const body = {
+            name: botName,
+            description: '',
+        };
+        const newBot = await medplum.post('admin/projects/' + projectId + '/bot', body);
+        const bot = await medplum.readResource('Bot', newBot.id);
+        const botConfig = {
+            name: botName,
+            id: newBot.id,
+            source: sourceFile,
+            dist: distFile,
+        };
+        await saveBot(medplum, botConfig, bot);
+        console.log(`Success! Bot created: ${bot.id}`);
+        addBotToConfig(botConfig);
+    }
+    catch (err) {
+        console.log('Error while creating new bot: ' + err);
+    }
+}
+function readBotConfigs(botName) {
+    const regExBotName = new RegExp('^' + escapeRegex(botName).replace(/\\\*/g, '.*') + '$');
+    const botConfigs = readConfig()?.bots?.filter((b) => regExBotName.test(b.name));
+    if (!botConfigs) {
+        return [];
+    }
+    return botConfigs;
+}
+function readConfig() {
+    const content = readFileContents('medplum.config.json');
+    if (!content) {
+        return undefined;
+    }
+    return JSON.parse(content);
+}
+function readFileContents(fileName) {
+    const path$1 = path.resolve(process.cwd(), fileName);
+    if (!fs.existsSync(path$1)) {
+        console.log('Error: File does not exist: ' + path$1);
+        return '';
+    }
+    return fs.readFileSync(path$1, 'utf8');
+}
+function addBotToConfig(botConfig) {
+    const config = readConfig();
+    config?.bots?.push(botConfig);
+    fs.writeFile('medplum.config.json', JSON.stringify(config), () => {
+        console.log(`Bot added to config: ${botConfig.id}`);
+    });
+}
+function escapeRegex(str) {
+    return str.replace(/[/\-\\^$*+?.()|[\]{}]/g, '\\$&');
+}
+
+const bot = new commander.Command('bot');
+// Commands to deprecate
+const saveBotDeprecate = new commander.Command('save-bot');
+const deployBotDeprecate = new commander.Command('deploy-bot');
+const createBotDeprecate = new commander.Command('create-bot');
+bot
+    .command('save')
+    .description('Saving the bot')
+    .argument('<botName>')
+    .action(async (botName) => {
+    await botWrapper(exports.medplum, botName);
+});
+bot
+    .command('deploy')
+    .description('Deploy the app to AWS')
+    .argument('<botName>')
+    .action(async (botName) => {
+    await botWrapper(exports.medplum, botName, true);
+});
+bot
+    .command('create')
+    .arguments('<botName> <projectId> <sourceFile> <distFile>')
+    .description('Creating a bot')
+    .action(async (botName, projectId, sourceFile, distFile) => {
+    await createBot(exports.medplum, [botName, projectId, sourceFile, distFile]);
+});
+async function botWrapper(medplum, botName, deploy = false) {
+    const botConfigs = readBotConfigs(botName);
+    for (const botConfig of botConfigs) {
+        const bot = await medplum.readResource('Bot', botConfig.id);
+        await saveBot(medplum, botConfig, bot);
+        if (deploy) {
+            await deployBot(medplum, botConfig, bot);
+        }
+    }
+    console.log(`Number of bots deployed: ${botConfigs.length}`);
+}
+// Deprecate bot commands
+saveBotDeprecate
+    .description('Saves the bot')
+    .argument('<botName>')
+    .action(async (botName) => {
+    await botWrapper(exports.medplum, botName);
+});
+deployBotDeprecate
+    .description('Deploy the bot to AWS')
+    .argument('<botName>')
+    .action(async (botName) => {
+    await botWrapper(exports.medplum, botName, true);
+});
+createBotDeprecate
+    .arguments('<botName> <projectId> <sourceFile> <distFile>')
+    .description('Creates and saves the bot')
+    .action(async (botName, projectId, sourceFile, distFile) => {
+    await createBot(exports.medplum, [botName, projectId, sourceFile, distFile]);
+});
+
+const clientId = 'medplum-cli';
+const redirectUri = 'http://localhost:9615';
+const login = new commander.Command('login');
+const whoami = new commander.Command('whoami');
+login.action(async () => {
+    await startLogin(exports.medplum);
+});
+whoami.action(() => {
+    printMe(exports.medplum);
+});
 async function startLogin(medplum) {
     await startWebServer(medplum);
     const loginUrl = new URL('/oauth2/authorize', medplum.getBaseUrl());
@@ -204,6 +282,7 @@ async function openBrowser(url) {
 function printMe(medplum) {
     const loginState = medplum.getActiveLogin();
     if (loginState) {
+        console.log(`Server:  ${medplum.getBaseUrl()}`);
         console.log(`Profile: ${loginState.profile?.display} (${loginState.profile?.reference})`);
         console.log(`Project: ${loginState.project?.display} (${loginState.project?.reference})`);
     }
@@ -211,15 +290,41 @@ function printMe(medplum) {
         console.log('Not logged in');
     }
 }
-function cleanUrl(input) {
-    const knownPrefixes = ['admin/', 'auth/', 'fhir/R4'];
-    if (knownPrefixes.some((p) => input.startsWith(p))) {
-        // If the URL starts with a known prefix, return it as-is
-        return input;
+
+const deleteObject = new commander.Command('delete');
+const get = new commander.Command('get');
+const patch = new commander.Command('patch');
+const post = new commander.Command('post');
+const put = new commander.Command('put');
+deleteObject.argument('<url>', 'Resource/$id').action(async (url) => {
+    prettyPrint(await exports.medplum.delete(cleanUrl(url)));
+});
+get
+    .argument('<url>', 'Resource/$id')
+    .option('--as-transaction', 'Print out the bundle as a transaction type')
+    .action(async (url, options) => {
+    try {
+        const response = await exports.medplum.get(cleanUrl(url));
+        if (options.asTransaction) {
+            prettyPrint(core.convertToTransactionBundle(response));
+        }
+        else {
+            prettyPrint(response);
+        }
     }
-    // Otherwise, default to FHIR
-    return 'fhir/R4/' + input;
-}
+    catch (err) {
+        console.log(err);
+    }
+});
+patch.arguments('<url> <body>').action(async (url, body) => {
+    prettyPrint(await exports.medplum.patch(cleanUrl(url), parseBody(body)));
+});
+post.arguments('<url> <body>').action(async (url, body) => {
+    prettyPrint(await exports.medplum.post(cleanUrl(url), parseBody(body)));
+});
+put.arguments('<url> <body>').action(async (url, body) => {
+    prettyPrint(await exports.medplum.put(cleanUrl(url), parseBody(body)));
+});
 function parseBody(input) {
     if (!input) {
         return undefined;
@@ -231,148 +336,99 @@ function parseBody(input) {
         return input;
     }
 }
-function prettyPrint(input) {
-    console.log(JSON.stringify(input, null, 2));
-}
-async function runBotCommands(medplum, argv, commands) {
-    if (argv.length < 4) {
-        console.log(`Usage: medplum ${argv[2]} <bot-name>`);
-        return;
-    }
-    const botName = argv[3];
-    const botConfigs = readBotConfigs(botName);
-    if (botConfigs.length === 0) {
-        console.log(`Error: ${botName} not found`);
-        return;
-    }
-    for (const botConfig of botConfigs) {
-        await runBotConfig(botConfig, medplum, argv, commands);
-    }
-    console.log(`Number of bots deployed: ${botConfigs.length}`);
-}
-async function runBotConfig(botConfig, medplum, argv, commands) {
-    let bot;
-    try {
-        bot = await medplum.readResource('Bot', botConfig.id);
-        console.log(`Initialized Bot -> ${bot.name}...`);
-    }
-    catch (err) {
-        console.log('Error: ' + core.normalizeErrorString(err));
-        return;
-    }
-    if (commands.includes('save')) {
-        await saveBot(medplum, botConfig, bot);
-    }
-    if (commands.includes('deploy')) {
-        await deployBot(medplum, botConfig, bot);
+function cleanUrl(input) {
+    const knownPrefixes = ['admin/', 'auth/', 'fhir/R4'];
+    if (knownPrefixes.some((p) => input.startsWith(p))) {
+        // If the URL starts with a known prefix, return it as-is
+        return input;
     }
+    // Otherwise, default to FHIR
+    return 'fhir/R4/' + input;
 }
-async function createBot(medplum, argv) {
-    if (argv.length < 7) {
-        console.log(`Error: command needs to be npx medplum <new-bot-name> <project-id> <source-file> <dist-file>`);
-        return;
-    }
-    const botName = argv[3];
-    const projectId = argv[4];
-    const sourceFile = argv[5];
-    const distFile = argv[6];
-    try {
-        const body = {
-            name: botName,
-            description: '',
-        };
-        const newBot = await medplum.post('admin/projects/' + projectId + '/bot', body);
-        const bot = await medplum.readResource('Bot', newBot.id);
-        const botConfig = {
-            name: botName,
-            id: newBot.id,
-            source: sourceFile,
-            dist: distFile,
-        };
-        await saveBot(medplum, botConfig, bot);
-        console.log(`Success! Bot created: ${bot.id}`);
-        addBotToConfig(botConfig);
-    }
-    catch (err) {
-        console.log('Error while creating new bot ', err);
-    }
+
+const project = new commander.Command('project');
+project
+    .command('list')
+    .description('List of current projects')
+    .action(async () => {
+    projectList(exports.medplum);
+});
+function projectList(medplum) {
+    const logins = medplum.getLogins();
+    const projects = logins
+        .map((login) => `${login.project.display} (${login.project.reference})`)
+        .join('\n\n');
+    console.log(projects);
 }
-async function saveBot(medplum, botConfig, bot) {
-    const code = readFileContents(botConfig.source);
-    if (!code) {
-        return;
-    }
-    try {
-        console.log('Update bot code.....');
-        const updateResult = await medplum.updateResource({
-            ...bot,
-            code,
-        });
-        if (!updateResult) {
-            console.log('Bot not modified');
-        }
-        else {
-            console.log('Success! New bot version: ' + updateResult.meta?.versionId);
-        }
+project
+    .command('current')
+    .description('Project you are currently on')
+    .action(() => {
+    const login = exports.medplum.getActiveLogin();
+    if (!login) {
+        throw new Error('Unauthenticated: run `npx medplum login` to login');
+    }
+    console.log(`${login.project.display} (${login.project.reference})`);
+});
+project
+    .command('switch')
+    .description('Switching to another project from the current one')
+    .argument('<projectId>')
+    .action(async (projectId) => {
+    await switchProject(exports.medplum, projectId);
+});
+async function switchProject(medplum, projectId) {
+    const logins = medplum.getLogins();
+    const login = logins.find((login) => login.project?.reference?.includes(projectId));
+    if (!login) {
+        console.log(`Error: project ${projectId} not found. Make sure you are added as a user to this project`);
     }
-    catch (err) {
-        console.log('Update error: ', err);
+    else {
+        await medplum.setActiveLogin(login);
+        console.log(`Switched to project ${projectId}\n`);
     }
 }
-async function deployBot(medplum, botConfig, bot) {
-    const code = readFileContents(botConfig.dist ?? botConfig.source);
-    if (!code) {
-        return;
+
+exports.medplum = void 0;
+async function main(medplumClient, argv) {
+    exports.medplum = medplumClient;
+    // Legacy support for MEDPLUM_CLIENT_ID and MEDPLUM_CLIENT_SECRET environment variables
+    const clientId = process.env['MEDPLUM_CLIENT_ID'];
+    const clientSecret = process.env['MEDPLUM_CLIENT_SECRET'];
+    if (clientId && clientSecret) {
+        await exports.medplum.startClientLogin(clientId, clientSecret);
     }
     try {
-        console.log('Deploying bot...');
-        const deployResult = (await medplum.post(medplum.fhirUrl('Bot', bot.id, '$deploy'), {
-            code,
-        }));
-        console.log('Deploy result: ' + deployResult.issue?.[0]?.details?.text);
+        const index = new commander.Command('medplum').description('Command to access Medplum CLI');
+        index.version('0.1.0');
+        // Auth commands
+        index.addCommand(login);
+        index.addCommand(whoami);
+        // REST commands
+        index.addCommand(get);
+        index.addCommand(post);
+        index.addCommand(patch);
+        index.addCommand(put);
+        index.addCommand(deleteObject);
+        // Project
+        index.addCommand(project);
+        // Bot Commands
+        index.addCommand(bot);
+        // Deprecated Bot Commands
+        index.addCommand(saveBotDeprecate);
+        index.addCommand(deployBotDeprecate);
+        index.addCommand(createBotDeprecate);
+        await index.parseAsync(argv);
     }
     catch (err) {
-        console.log('Deploy error: ', err);
-    }
-}
-function escapeRegex(str) {
-    return str.replace(/[/\-\\^$*+?.()|[\]{}]/g, '\\$&');
-}
-function readBotConfigs(botName) {
-    const regExBotName = new RegExp('^' + escapeRegex(botName).replace(/\\\*/g, '.*') + '$');
-    const botConfigs = readConfig()?.bots?.filter((b) => regExBotName.test(b.name));
-    if (!botConfigs) {
-        return [];
-    }
-    return botConfigs;
-}
-function readConfig() {
-    const content = readFileContents('medplum.config.json');
-    if (!content) {
-        return undefined;
-    }
-    return JSON.parse(content);
-}
-function readFileContents(fileName) {
-    const path$1 = path.resolve(process.cwd(), fileName);
-    if (!fs.existsSync(path$1)) {
-        console.log('Error: File does not exist: ' + path$1);
-        return '';
+        console.error('Error: ' + core.normalizeErrorString(err));
     }
-    return fs.readFileSync(path$1, 'utf8');
-}
-function addBotToConfig(botConfig) {
-    const config = readConfig();
-    config?.bots?.push(botConfig);
-    fs.writeFile('medplum.config.json', JSON.stringify(config), () => {
-        console.log(`Bot added to config: ${botConfig.id}`);
-    });
 }
 if (require.main === module) {
     dotenv.config();
     const baseUrl = process.env['MEDPLUM_BASE_URL'] || 'https://api.medplum.com/';
-    const medplum = new core.MedplumClient({ fetch, baseUrl, storage: new FileSystemStorage() });
-    main(medplum, process.argv).catch((err) => console.error('Unhandled error:', err));
+    const medplumClient = new core.MedplumClient({ fetch, baseUrl, storage: new FileSystemStorage() });
+    main(medplumClient, process.argv).catch((err) => console.error('Unhandled error:', err));
 }
 
 exports.main = main;

package/dist/cjs/index.cjs.map

@@ -1 +1 @@
-{"version":3,"file":"index.cjs","sources":["../../../../node_modules/tslib/tslib.es6.js","../../../src/storage.ts","../../../src/index.ts"],"sourcesContent":["/******************************************************************************\r\nCopyright (c) Microsoft Corporation.\r\n\r\nPermission to use, copy, modify, and/or distribute this software for any\r\npurpose with or without fee is hereby granted.\r\n\r\nTHE SOFTWARE IS PROVIDED \"AS IS\" AND THE AUTHOR DISCLAIMS ALL WARRANTIES WITH\r\nREGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY\r\nAND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY SPECIAL, DIRECT,\r\nINDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM\r\nLOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR\r\nOTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR\r\nPERFORMANCE OF THIS SOFTWARE.\r\n***************************************************************************** */\r\n/* global Reflect, Promise */\r\n\r\nvar extendStatics = function(d, b) {\r\n    extendStatics = Object.setPrototypeOf ||\r\n        ({ __proto__: [] } instanceof Array && function (d, b) { d.__proto__ = b; }) ||\r\n        function (d, b) { for (var p in b) if (Object.prototype.hasOwnProperty.call(b, p)) d[p] = b[p]; };\r\n    return extendStatics(d, b);\r\n};\r\n\r\nexport function __extends(d, b) {\r\n    if (typeof b !== \"function\" && b !== null)\r\n        throw new TypeError(\"Class extends value \" + String(b) + \" is not a constructor or null\");\r\n    extendStatics(d, b);\r\n    function __() { this.constructor = d; }\r\n    d.prototype = b === null ? Object.create(b) : (__.prototype = b.prototype, new __());\r\n}\r\n\r\nexport var __assign = function() {\r\n    __assign = Object.assign || function __assign(t) {\r\n        for (var s, i = 1, n = arguments.length; i < n; i++) {\r\n            s = arguments[i];\r\n            for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p)) t[p] = s[p];\r\n        }\r\n        return t;\r\n    }\r\n    return __assign.apply(this, arguments);\r\n}\r\n\r\nexport function __rest(s, e) {\r\n    var t = {};\r\n    for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p) && e.indexOf(p) < 0)\r\n        t[p] = s[p];\r\n    if (s != null && typeof Object.getOwnPropertySymbols === \"function\")\r\n        for (var i = 0, p = Object.getOwnPropertySymbols(s); i < p.length; i++) {\r\n            if (e.indexOf(p[i]) < 0 && Object.prototype.propertyIsEnumerable.call(s, p[i]))\r\n                t[p[i]] = s[p[i]];\r\n        }\r\n    return t;\r\n}\r\n\r\nexport function __decorate(decorators, target, key, desc) {\r\n    var c = arguments.length, r = c < 3 ? target : desc === null ? desc = Object.getOwnPropertyDescriptor(target, key) : desc, d;\r\n    if (typeof Reflect === \"object\" && typeof Reflect.decorate === \"function\") r = Reflect.decorate(decorators, target, key, desc);\r\n    else for (var i = decorators.length - 1; i >= 0; i--) if (d = decorators[i]) r = (c < 3 ? d(r) : c > 3 ? d(target, key, r) : d(target, key)) || r;\r\n    return c > 3 && r && Object.defineProperty(target, key, r), r;\r\n}\r\n\r\nexport function __param(paramIndex, decorator) {\r\n    return function (target, key) { decorator(target, key, paramIndex); }\r\n}\r\n\r\nexport function __esDecorate(ctor, descriptorIn, decorators, contextIn, initializers, extraInitializers) {\r\n    function accept(f) { if (f !== void 0 && typeof f !== \"function\") throw new TypeError(\"Function expected\"); return f; }\r\n    var kind = contextIn.kind, key = kind === \"getter\" ? \"get\" : kind === \"setter\" ? \"set\" : \"value\";\r\n    var target = !descriptorIn && ctor ? contextIn[\"static\"] ? ctor : ctor.prototype : null;\r\n    var descriptor = descriptorIn || (target ? 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(this.v = v, this) : new __await(v);\r\n}\r\n\r\nexport function __asyncGenerator(thisArg, _arguments, generator) {\r\n    if (!Symbol.asyncIterator) throw new TypeError(\"Symbol.asyncIterator is not defined.\");\r\n    var g = generator.apply(thisArg, _arguments || []), i, q = [];\r\n    return i = {}, verb(\"next\"), verb(\"throw\"), verb(\"return\"), i[Symbol.asyncIterator] = function () { return this; }, i;\r\n    function verb(n) { if (g[n]) i[n] = function (v) { return new Promise(function (a, b) { q.push([n, v, a, b]) > 1 || resume(n, v); }); }; }\r\n    function resume(n, v) { try { step(g[n](v)); } catch (e) { settle(q[0][3], e); } }\r\n    function step(r) { r.value instanceof __await ? Promise.resolve(r.value.v).then(fulfill, reject) : settle(q[0][2], r); }\r\n    function fulfill(value) { resume(\"next\", value); }\r\n    function reject(value) { resume(\"throw\", value); }\r\n    function settle(f, v) { if (f(v), q.shift(), q.length) resume(q[0][0], q[0][1]); }\r\n}\r\n\r\nexport function __asyncDelegator(o) {\r\n    var i, p;\r\n    return i = {}, verb(\"next\"), verb(\"throw\", function (e) { throw e; }), verb(\"return\"), i[Symbol.iterator] = function () { return this; }, i;\r\n    function verb(n, f) { i[n] = o[n] ? function (v) { return (p = !p) ? { value: __await(o[n](v)), done: false } : f ? f(v) : v; } : f; }\r\n}\r\n\r\nexport function __asyncValues(o) {\r\n    if (!Symbol.asyncIterator) throw new TypeError(\"Symbol.asyncIterator is not defined.\");\r\n    var m = o[Symbol.asyncIterator], i;\r\n    return m ? m.call(o) : (o = typeof __values === \"function\" ? __values(o) : o[Symbol.iterator](), i = {}, verb(\"next\"), verb(\"throw\"), verb(\"return\"), i[Symbol.asyncIterator] = function () { return this; }, i);\r\n    function verb(n) { i[n] = o[n] && function (v) { return new Promise(function (resolve, reject) { v = o[n](v), settle(resolve, reject, v.done, v.value); }); }; }\r\n    function settle(resolve, reject, d, v) { Promise.resolve(v).then(function(v) { resolve({ value: v, done: d }); }, reject); }\r\n}\r\n\r\nexport function __makeTemplateObject(cooked, raw) {\r\n    if (Object.defineProperty) { Object.defineProperty(cooked, \"raw\", { value: raw }); } else { cooked.raw = raw; }\r\n    return cooked;\r\n};\r\n\r\nvar __setModuleDefault = Object.create ? (function(o, v) {\r\n    Object.defineProperty(o, \"default\", { enumerable: true, value: v });\r\n}) : function(o, v) {\r\n    o[\"default\"] = v;\r\n};\r\n\r\nexport function __importStar(mod) {\r\n    if (mod && mod.__esModule) return mod;\r\n    var result = {};\r\n    if (mod != null) for (var k in mod) if (k !== \"default\" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);\r\n    __setModuleDefault(result, mod);\r\n    return result;\r\n}\r\n\r\nexport function __importDefault(mod) {\r\n    return (mod && mod.__esModule) ? mod : { default: mod };\r\n}\r\n\r\nexport function __classPrivateFieldGet(receiver, state, kind, f) {\r\n    if (kind === \"a\" && !f) throw new TypeError(\"Private accessor was defined without a getter\");\r\n    if (typeof state === \"function\" ? receiver !== state || !f : !state.has(receiver)) throw new TypeError(\"Cannot read private member from an object whose class did not declare it\");\r\n    return kind === \"m\" ? f : kind === \"a\" ? f.call(receiver) : f ? f.value : state.get(receiver);\r\n}\r\n\r\nexport function __classPrivateFieldSet(receiver, state, value, kind, f) {\r\n    if (kind === \"m\") throw new TypeError(\"Private method is not writable\");\r\n    if (kind === \"a\" && !f) throw new TypeError(\"Private accessor was defined without a setter\");\r\n    if (typeof state === \"function\" ? receiver !== state || !f : !state.has(receiver)) throw new TypeError(\"Cannot write private member to an object whose class did not declare it\");\r\n    return (kind === \"a\" ? f.call(receiver, value) : f ? f.value = value : state.set(receiver, value)), value;\r\n}\r\n\r\nexport function __classPrivateFieldIn(state, receiver) {\r\n    if (receiver === null || (typeof receiver !== \"object\" && typeof receiver !== \"function\")) throw new TypeError(\"Cannot use 'in' operator on non-object\");\r\n    return typeof state === \"function\" ? receiver === state : state.has(receiver);\r\n}\r\n","import { ClientStorage } from '@medplum/core';\nimport { existsSync, mkdirSync, readFileSync, writeFileSync } from 'fs';\nimport { homedir } from 'os';\nimport { resolve } from 'path';\n\nexport class FileSystemStorage extends ClientStorage {\n  readonly #dirName: string;\n  readonly #fileName: string;\n\n  constructor() {\n    super();\n    this.#dirName = resolve(homedir(), '.medplum');\n    this.#fileName = resolve(this.#dirName, 'credentials');\n  }\n\n  clear(): void {\n    this.#writeFile({});\n  }\n\n  getString(key: string): string | undefined {\n    return this.#readFile()?.[key];\n  }\n\n  setString(key: string, value: string | undefined): void {\n    const data = this.#readFile() || {};\n    if (value) {\n      data[key] = value;\n    } else {\n      delete data[key];\n    }\n    this.#writeFile(data);\n  }\n\n  #readFile(): Record<string, string> | undefined {\n    if (existsSync(this.#fileName)) {\n      return JSON.parse(readFileSync(this.#fileName, 'utf8'));\n    }\n    return undefined;\n  }\n\n  #writeFile(data: Record<string, string>): void {\n    if (!existsSync(this.#dirName)) {\n      mkdirSync(this.#dirName);\n    }\n    writeFileSync(this.#fileName, JSON.stringify(data, null, 2), 'utf8');\n  }\n}\n","import { getDisplayString, MedplumClient, normalizeErrorString } from '@medplum/core';\nimport { Bot, OperationOutcome } from '@medplum/fhirtypes';\nimport { exec } from 'child_process';\nimport dotenv from 'dotenv';\nimport { existsSync, readFileSync, writeFile } from 'fs';\nimport { createServer } from 'http';\nimport fetch from 'node-fetch';\nimport { platform } from 'os';\nimport { resolve } from 'path';\nimport { FileSystemStorage } from './storage';\n\ninterface MedplumConfig {\n  readonly bots?: MedplumBotConfig[];\n}\n\ninterface MedplumBotConfig {\n  readonly name: string;\n  readonly id: string;\n  readonly source: string;\n  readonly dist?: string;\n}\n\nconst clientId = 'medplum-cli';\nconst redirectUri = 'http://localhost:9615';\n\nexport async function main(medplum: MedplumClient, argv: string[]): Promise<void> {\n  if (argv.length < 3) {\n    console.log('Usage: medplum <command>');\n    return;\n  }\n\n  // Legacy support for MEDPLUM_CLIENT_ID and MEDPLUM_CLIENT_SECRET environment variables\n  const clientId = process.env['MEDPLUM_CLIENT_ID'];\n  const clientSecret = process.env['MEDPLUM_CLIENT_SECRET'];\n  if (clientId && clientSecret) {\n    await medplum.startClientLogin(clientId, clientSecret);\n  }\n\n  try {\n    const command = argv[2].toLowerCase();\n    switch (command) {\n      //\n      // Auth commands\n      //\n      case 'login':\n        await startLogin(medplum);\n        break;\n      case 'whoami':\n        printMe(medplum);\n        break;\n      //\n      // REST commands\n      //\n      case 'delete':\n        prettyPrint(await medplum.delete(cleanUrl(argv[3])));\n        break;\n      case 'get':\n        prettyPrint(await medplum.get(cleanUrl(argv[3])));\n        break;\n      case 'patch':\n        prettyPrint(await medplum.patch(cleanUrl(argv[3]), parseBody(argv[4])));\n        break;\n      case 'post':\n        prettyPrint(await medplum.post(cleanUrl(argv[3]), parseBody(argv[4])));\n        break;\n      case 'put':\n        prettyPrint(await medplum.put(cleanUrl(argv[3]), parseBody(argv[4])));\n        break;\n      //\n      // Bot commands\n      //\n      case 'save-bot':\n        await runBotCommands(medplum, argv, ['save']);\n        break;\n      case 'deploy-bot':\n        await runBotCommands(medplum, argv, ['save', 'deploy']);\n        break;\n      case 'create-bot':\n        await createBot(medplum, argv);\n        break;\n      default:\n        console.log(`Unknown command: ${command}`);\n    }\n  } catch (err) {\n    console.error('Error: ' + normalizeErrorString(err));\n  }\n}\n\nasync function startLogin(medplum: MedplumClient): Promise<void> {\n  await startWebServer(medplum);\n\n  const loginUrl = new URL('/oauth2/authorize', medplum.getBaseUrl());\n  loginUrl.searchParams.set('client_id', clientId);\n  loginUrl.searchParams.set('redirect_uri', redirectUri);\n  loginUrl.searchParams.set('scope', 'openid');\n  loginUrl.searchParams.set('response_type', 'code');\n  await openBrowser(loginUrl.toString());\n}\n\nasync function startWebServer(medplum: MedplumClient): Promise<void> {\n  const server = createServer(async (req, res) => {\n    const url = new URL(req.url as string, 'http://localhost:9615');\n    const code = url.searchParams.get('code');\n    if (url.pathname === '/' && code) {\n      try {\n        const profile = await medplum.processCode(code, { clientId, redirectUri });\n        res.writeHead(200, { 'Content-Type': 'text/plain' });\n        res.end(`Signed in as ${getDisplayString(profile)}. You may close this window.`);\n      } catch (err) {\n        res.writeHead(400, { 'Content-Type': 'text/plain' });\n        res.end(`Error: ${normalizeErrorString(err)}`);\n      } finally {\n        server.close();\n      }\n    } else {\n      res.writeHead(404, { 'Content-Type': 'text/plain' });\n      res.end('Not found');\n    }\n  }).listen(9615);\n}\n\n/**\n * Opens a web browser to the specified URL.\n * See: https://hasinthaindrajee.medium.com/browser-sso-for-cli-applications-b0be743fa656\n * @param url The URL to open.\n */\nasync function openBrowser(url: string): Promise<void> {\n  const os = platform();\n  let cmd = undefined;\n  switch (os) {\n    case 'openbsd':\n    case 'linux':\n      cmd = `xdg-open '${url}'`;\n      break;\n    case 'darwin':\n      cmd = `open '${url}'`;\n      break;\n    case 'win32':\n      cmd = `cmd /c start \"\" \"${url}\"`;\n      break;\n    default:\n      throw new Error('Unsupported platform: ' + os);\n  }\n  exec(cmd);\n}\n\n/**\n * Prints the current user and project.\n * @param medplum The Medplum client.\n */\nfunction printMe(medplum: MedplumClient): void {\n  const loginState = medplum.getActiveLogin();\n  if (loginState) {\n    console.log(`Profile: ${loginState.profile?.display} (${loginState.profile?.reference})`);\n    console.log(`Project: ${loginState.project?.display} (${loginState.project?.reference})`);\n  } else {\n    console.log('Not logged in');\n  }\n}\n\nfunction cleanUrl(input: string): string {\n  const knownPrefixes = ['admin/', 'auth/', 'fhir/R4'];\n  if (knownPrefixes.some((p) => input.startsWith(p))) {\n    // If the URL starts with a known prefix, return it as-is\n    return input;\n  }\n  // Otherwise, default to FHIR\n  return 'fhir/R4/' + input;\n}\n\nfunction parseBody(input: string | undefined): any {\n  if (!input) {\n    return undefined;\n  }\n  try {\n    return JSON.parse(input);\n  } catch (err) {\n    return input;\n  }\n}\n\nfunction prettyPrint(input: unknown): void {\n  console.log(JSON.stringify(input, null, 2));\n}\n\nasync function runBotCommands(medplum: MedplumClient, argv: string[], commands: string[]): Promise<void> {\n  if (argv.length < 4) {\n    console.log(`Usage: medplum ${argv[2]} <bot-name>`);\n    return;\n  }\n\n  const botName = argv[3];\n\n  const botConfigs = readBotConfigs(botName);\n  if (botConfigs.length === 0) {\n    console.log(`Error: ${botName} not found`);\n    return;\n  }\n\n  for (const botConfig of botConfigs) {\n    await runBotConfig(botConfig, medplum, argv, commands);\n  }\n\n  console.log(`Number of bots deployed: ${botConfigs.length}`);\n}\n\nasync function runBotConfig(\n  botConfig: MedplumBotConfig,\n  medplum: MedplumClient,\n  argv: string[],\n  commands: string[]\n): Promise<void> {\n  let bot;\n  try {\n    bot = await medplum.readResource('Bot', botConfig.id);\n    console.log(`Initialized Bot -> ${bot.name}...`);\n  } catch (err) {\n    console.log('Error: ' + normalizeErrorString(err));\n    return;\n  }\n\n  if (commands.includes('save')) {\n    await saveBot(medplum, botConfig, bot);\n  }\n\n  if (commands.includes('deploy')) {\n    await deployBot(medplum, botConfig, bot);\n  }\n}\n\nasync function createBot(medplum: MedplumClient, argv: string[]): Promise<void> {\n  if (argv.length < 7) {\n    console.log(`Error: command needs to be npx medplum <new-bot-name> <project-id> <source-file> <dist-file>`);\n    return;\n  }\n  const botName = argv[3];\n  const projectId = argv[4];\n  const sourceFile = argv[5];\n  const distFile = argv[6];\n\n  try {\n    const body = {\n      name: botName,\n      description: '',\n    };\n    const newBot = await medplum.post('admin/projects/' + projectId + '/bot', body);\n    const bot = await medplum.readResource('Bot', newBot.id);\n\n    const botConfig = {\n      name: botName,\n      id: newBot.id,\n      source: sourceFile,\n      dist: distFile,\n    };\n    await saveBot(medplum, botConfig as MedplumBotConfig, bot);\n    console.log(`Success! Bot created: ${bot.id}`);\n\n    addBotToConfig(botConfig);\n  } catch (err) {\n    console.log('Error while creating new bot ', err);\n  }\n}\n\nasync function saveBot(medplum: MedplumClient, botConfig: MedplumBotConfig, bot: Bot): Promise<void> {\n  const code = readFileContents(botConfig.source);\n  if (!code) {\n    return;\n  }\n\n  try {\n    console.log('Update bot code.....');\n    const updateResult = await medplum.updateResource({\n      ...bot,\n      code,\n    });\n    if (!updateResult) {\n      console.log('Bot not modified');\n    } else {\n      console.log('Success! 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readConfig()?.bots?.filter((b) => regExBotName.test(b.name));\n  if (!botConfigs) {\n    return [];\n  }\n  return botConfigs;\n}\n\nfunction readConfig(): MedplumConfig | undefined {\n  const content = readFileContents('medplum.config.json');\n  if (!content) {\n    return undefined;\n  }\n  return JSON.parse(content);\n}\n\nfunction readFileContents(fileName: string): string | undefined {\n  const path = resolve(process.cwd(), fileName);\n  if (!existsSync(path)) {\n    console.log('Error: File does not exist: ' + path);\n    return '';\n  }\n  return readFileSync(path, 'utf8');\n}\n\nfunction addBotToConfig(botConfig: MedplumBotConfig): void {\n  const config = readConfig();\n  config?.bots?.push(botConfig);\n  writeFile('medplum.config.json', JSON.stringify(config), () => {\n    console.log(`Bot added to config: ${botConfig.id}`);\n  });\n}\n\nif (require.main === module) {\n  dotenv.config();\n  const baseUrl = process.env['MEDPLUM_BASE_URL'] || 'https://api.medplum.com/';\n  const medplum = new MedplumClient({ fetch, baseUrl, storage: new FileSystemStorage() });\n  main(medplum, process.argv).catch((err) => console.error('Unhandled error:', 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+{"version":3,"file":"index.cjs","sources":["../../../src/storage.ts","../../../src/utils.ts","../../../src/bots.ts","../../../src/auth.ts","../../../src/rest.ts","../../../src/projects.ts","../../../src/index.ts"],"sourcesContent":["import { ClientStorage } from '@medplum/core';\nimport { existsSync, mkdirSync, readFileSync, writeFileSync } from 'fs';\nimport { homedir } from 'os';\nimport { resolve } from 'path';\n\nexport class FileSystemStorage extends ClientStorage {\n  private readonly dirName: string;\n  private readonly fileName: string;\n\n  constructor() {\n    super();\n    this.dirName = resolve(homedir(), '.medplum');\n    this.fileName = resolve(this.dirName, 'credentials');\n  }\n\n  clear(): void {\n    this.writeFile({});\n  }\n\n  getString(key: string): string | undefined {\n    return this.readFile()?.[key];\n  }\n\n  setString(key: string, value: string | undefined): void {\n    const data = this.readFile() || {};\n    if (value) {\n      data[key] = value;\n    } else {\n      delete data[key];\n    }\n    this.writeFile(data);\n  }\n\n  private readFile(): Record<string, string> | undefined {\n    if (existsSync(this.fileName)) {\n      return JSON.parse(readFileSync(this.fileName, 'utf8'));\n    }\n    return undefined;\n  }\n\n  private writeFile(data: Record<string, string>): void {\n    if (!existsSync(this.dirName)) {\n      mkdirSync(this.dirName);\n    }\n    writeFileSync(this.fileName, JSON.stringify(data, null, 2), 'utf8');\n  }\n}\n","import { MedplumClient } from '@medplum/core';\nimport { resolve } from 'path';\nimport { existsSync, readFileSync, writeFile } from 'fs';\nimport { Bot, OperationOutcome } from '@medplum/fhirtypes';\n\ninterface MedplumConfig {\n  readonly bots?: MedplumBotConfig[];\n}\n\ninterface MedplumBotConfig {\n  readonly name: string;\n  readonly id: string;\n  readonly source: string;\n  readonly dist?: string;\n}\n\nexport function prettyPrint(input: unknown): void {\n  console.log(JSON.stringify(input, null, 2));\n}\n\nexport async function saveBot(medplum: MedplumClient, botConfig: MedplumBotConfig, bot: Bot): Promise<void> {\n  const code = readFileContents(botConfig.source);\n  if (!code) {\n    return;\n  }\n\n  try {\n    console.log('Update bot code.....');\n    const updateResult = await medplum.updateResource({\n      ...bot,\n      code,\n    });\n    if (!updateResult) {\n      console.log('Bot not modified');\n    } else {\n      console.log('Success! New bot version: ' + updateResult.meta?.versionId);\n    }\n  } catch (err) {\n    console.log('Update error: ', err);\n  }\n}\n\nexport async function deployBot(medplum: MedplumClient, botConfig: MedplumBotConfig, bot: Bot): Promise<void> {\n  const code = readFileContents(botConfig.dist ?? botConfig.source);\n  if (!code) {\n    return;\n  }\n\n  try {\n    console.log('Deploying bot...');\n    const deployResult = (await medplum.post(medplum.fhirUrl('Bot', bot.id as string, '$deploy'), {\n      code,\n    })) as OperationOutcome;\n    console.log('Deploy result: ' + deployResult.issue?.[0]?.details?.text);\n  } catch (err) {\n    console.log('Deploy error: ', err);\n  }\n}\n\nexport async function createBot(medplum: MedplumClient, argv: string[]): Promise<void> {\n  if (argv.length < 4) {\n    console.log(`Error: command needs to be npx medplum <new-bot-name> <project-id> <source-file> <dist-file>`);\n    return;\n  }\n  const botName = argv[0];\n  const projectId = argv[1];\n  const sourceFile = argv[2];\n  const distFile = argv[3];\n\n  try {\n    const body = {\n      name: botName,\n      description: '',\n    };\n    const newBot = await medplum.post('admin/projects/' + projectId + '/bot', body);\n    const bot = await medplum.readResource('Bot', newBot.id);\n\n    const botConfig = {\n      name: botName,\n      id: newBot.id,\n      source: sourceFile,\n      dist: distFile,\n    };\n    await saveBot(medplum, botConfig as MedplumBotConfig, bot);\n    console.log(`Success! Bot created: ${bot.id}`);\n\n    addBotToConfig(botConfig);\n  } catch (err) {\n    console.log('Error while creating new bot: ' + err);\n  }\n}\n\nexport function readBotConfigs(botName: string): MedplumBotConfig[] {\n  const regExBotName = new RegExp('^' + escapeRegex(botName).replace(/\\\\\\*/g, '.*') + '$');\n  const botConfigs = readConfig()?.bots?.filter((b) => regExBotName.test(b.name));\n  if (!botConfigs) {\n    return [];\n  }\n  return botConfigs;\n}\n\nfunction readConfig(): MedplumConfig | undefined {\n  const content = readFileContents('medplum.config.json');\n  if (!content) {\n    return undefined;\n  }\n  return JSON.parse(content);\n}\n\nfunction readFileContents(fileName: string): string | undefined {\n  const path = resolve(process.cwd(), fileName);\n  if (!existsSync(path)) {\n    console.log('Error: File does not exist: ' + path);\n    return '';\n  }\n  return readFileSync(path, 'utf8');\n}\n\nfunction addBotToConfig(botConfig: MedplumBotConfig): void {\n  const config = readConfig();\n  config?.bots?.push(botConfig);\n  writeFile('medplum.config.json', JSON.stringify(config), () => {\n    console.log(`Bot added to config: ${botConfig.id}`);\n  });\n}\n\nfunction escapeRegex(str: string): string {\n  return str.replace(/[/\\-\\\\^$*+?.()|[\\]{}]/g, '\\\\$&');\n}\n","import { Command } from 'commander';\nimport { medplum } from '.';\nimport { createBot, deployBot, readBotConfigs, saveBot } from './utils';\nimport { MedplumClient } from '@medplum/core';\n\nexport const bot = new Command('bot');\n\n// Commands to deprecate\nexport const saveBotDeprecate = new Command('save-bot');\nexport const deployBotDeprecate = new Command('deploy-bot');\nexport const createBotDeprecate = new Command('create-bot');\n\nbot\n  .command('save')\n  .description('Saving the bot')\n  .argument('<botName>')\n  .action(async (botName) => {\n    await botWrapper(medplum, botName);\n  });\n\nbot\n  .command('deploy')\n  .description('Deploy the app to AWS')\n  .argument('<botName>')\n  .action(async (botName) => {\n    await botWrapper(medplum, botName, true);\n  });\n\nbot\n  .command('create')\n  .arguments('<botName> <projectId> <sourceFile> <distFile>')\n  .description('Creating a bot')\n  .action(async (botName, projectId, sourceFile, distFile) => {\n    await createBot(medplum, [botName, projectId, sourceFile, distFile]);\n  });\n\nexport async function botWrapper(medplum: MedplumClient, botName: string, deploy = false): Promise<void> {\n  const botConfigs = readBotConfigs(botName);\n  for (const botConfig of botConfigs) {\n    const bot = await medplum.readResource('Bot', botConfig.id);\n    await saveBot(medplum, botConfig, bot);\n    if (deploy) {\n      await deployBot(medplum, botConfig, bot);\n    }\n  }\n  console.log(`Number of bots deployed: ${botConfigs.length}`);\n}\n\n// Deprecate bot commands\nsaveBotDeprecate\n  .description('Saves the bot')\n  .argument('<botName>')\n  .action(async (botName) => {\n    await botWrapper(medplum, botName);\n  });\n\ndeployBotDeprecate\n  .description('Deploy the bot to AWS')\n  .argument('<botName>')\n  .action(async (botName) => {\n    await botWrapper(medplum, botName, true);\n  });\n\ncreateBotDeprecate\n  .arguments('<botName> <projectId> <sourceFile> <distFile>')\n  .description('Creates and saves the bot')\n  .action(async (botName, projectId, sourceFile, distFile) => {\n    await createBot(medplum, [botName, projectId, sourceFile, distFile]);\n  });\n","import { Command } from 'commander';\nimport { medplum } from '.';\nimport { MedplumClient, getDisplayString, normalizeErrorString } from '@medplum/core';\nimport { platform } from 'os';\nimport { exec } from 'child_process';\nimport { createServer } from 'http';\n\nconst clientId = 'medplum-cli';\nconst redirectUri = 'http://localhost:9615';\n\nexport const login = new Command('login');\nexport const whoami = new Command('whoami');\n\nlogin.action(async () => {\n  await startLogin(medplum);\n});\n\nwhoami.action(() => {\n  printMe(medplum);\n});\n\nasync function startLogin(medplum: MedplumClient): Promise<void> {\n  await startWebServer(medplum);\n\n  const loginUrl = new URL('/oauth2/authorize', medplum.getBaseUrl());\n  loginUrl.searchParams.set('client_id', clientId);\n  loginUrl.searchParams.set('redirect_uri', redirectUri);\n  loginUrl.searchParams.set('scope', 'openid');\n  loginUrl.searchParams.set('response_type', 'code');\n  await openBrowser(loginUrl.toString());\n}\n\nasync function startWebServer(medplum: MedplumClient): Promise<void> {\n  const server = createServer(async (req, res) => {\n    const url = new URL(req.url as string, 'http://localhost:9615');\n    const code = url.searchParams.get('code');\n    if (url.pathname === '/' && code) {\n      try {\n        const profile = await medplum.processCode(code, { clientId, redirectUri });\n        res.writeHead(200, { 'Content-Type': 'text/plain' });\n        res.end(`Signed in as ${getDisplayString(profile)}. You may close this window.`);\n      } catch (err) {\n        res.writeHead(400, { 'Content-Type': 'text/plain' });\n        res.end(`Error: ${normalizeErrorString(err)}`);\n      } finally {\n        server.close();\n      }\n    } else {\n      res.writeHead(404, { 'Content-Type': 'text/plain' });\n      res.end('Not found');\n    }\n  }).listen(9615);\n}\n\n/**\n * Opens a web browser to the specified URL.\n * See: https://hasinthaindrajee.medium.com/browser-sso-for-cli-applications-b0be743fa656\n * @param url The URL to open.\n */\nasync function openBrowser(url: string): Promise<void> {\n  const os = platform();\n  let cmd = undefined;\n  switch (os) {\n    case 'openbsd':\n    case 'linux':\n      cmd = `xdg-open '${url}'`;\n      break;\n    case 'darwin':\n      cmd = `open '${url}'`;\n      break;\n    case 'win32':\n      cmd = `cmd /c start \"\" \"${url}\"`;\n      break;\n    default:\n      throw new Error('Unsupported platform: ' + os);\n  }\n  exec(cmd);\n}\n\n/**\n * Prints the current user and project.\n * @param medplum The Medplum client.\n */\nfunction printMe(medplum: MedplumClient): void {\n  const loginState = medplum.getActiveLogin();\n  if (loginState) {\n    console.log(`Server:  ${medplum.getBaseUrl()}`);\n    console.log(`Profile: ${loginState.profile?.display} (${loginState.profile?.reference})`);\n    console.log(`Project: ${loginState.project?.display} (${loginState.project?.reference})`);\n  } else {\n    console.log('Not logged in');\n  }\n}\n","import { convertToTransactionBundle } from '@medplum/core';\nimport { Command } from 'commander';\nimport { medplum } from '.';\nimport { prettyPrint } from './utils';\n\nexport const deleteObject = new Command('delete');\nexport const get = new Command('get');\nexport const patch = new Command('patch');\nexport const post = new Command('post');\nexport const put = new Command('put');\n\ndeleteObject.argument('<url>', 'Resource/$id').action(async (url) => {\n  prettyPrint(await medplum.delete(cleanUrl(url)));\n});\n\nget\n  .argument('<url>', 'Resource/$id')\n  .option('--as-transaction', 'Print out the bundle as a transaction type')\n  .action(async (url, options) => {\n    try {\n      const response = await medplum.get(cleanUrl(url));\n      if (options.asTransaction) {\n        prettyPrint(convertToTransactionBundle(response));\n      } else {\n        prettyPrint(response);\n      }\n    } catch (err) {\n      console.log(err);\n    }\n  });\n\npatch.arguments('<url> <body>').action(async (url, body) => {\n  prettyPrint(await medplum.patch(cleanUrl(url), parseBody(body)));\n});\n\npost.arguments('<url> <body>').action(async (url, body) => {\n  prettyPrint(await medplum.post(cleanUrl(url), parseBody(body)));\n});\n\nput.arguments('<url> <body>').action(async (url, body) => {\n  prettyPrint(await medplum.put(cleanUrl(url), parseBody(body)));\n});\n\nfunction parseBody(input: string | undefined): any {\n  if (!input) {\n    return undefined;\n  }\n  try {\n    return JSON.parse(input);\n  } catch (err) {\n    return input;\n  }\n}\n\nexport function cleanUrl(input: string): string {\n  const knownPrefixes = ['admin/', 'auth/', 'fhir/R4'];\n  if (knownPrefixes.some((p) => input.startsWith(p))) {\n    // If the URL starts with a known prefix, return it as-is\n    return input;\n  }\n  // Otherwise, default to FHIR\n  return 'fhir/R4/' + input;\n}\n","import { Command } from 'commander';\nimport { medplum } from '.';\nimport { MedplumClient, LoginState } from '@medplum/core';\n\nexport const project = new Command('project');\n\nproject\n  .command('list')\n  .description('List of current projects')\n  .action(async () => {\n    projectList(medplum);\n  });\n\nfunction projectList(medplum: MedplumClient): void {\n  const logins = medplum.getLogins();\n\n  const projects = logins\n    .map((login: LoginState) => `${login.project.display} (${login.project.reference})`)\n    .join('\\n\\n');\n\n  console.log(projects);\n}\n\nproject\n  .command('current')\n  .description('Project you are currently on')\n  .action(() => {\n    const login = medplum.getActiveLogin();\n    if (!login) {\n      throw new Error('Unauthenticated: run `npx medplum login` to login');\n    }\n    console.log(`${login.project.display} (${login.project.reference})`);\n  });\n\nproject\n  .command('switch')\n  .description('Switching to another project from the current one')\n  .argument('<projectId>')\n  .action(async (projectId) => {\n    await switchProject(medplum, projectId);\n  });\n\nasync function switchProject(medplum: MedplumClient, projectId: string): Promise<void> {\n  const logins = medplum.getLogins();\n  const login = logins.find((login: LoginState) => login.project?.reference?.includes(projectId));\n  if (!login) {\n    console.log(`Error: project ${projectId} not found. Make sure you are added as a user to this project`);\n  } else {\n    await medplum.setActiveLogin(login);\n    console.log(`Switched to project ${projectId}\\n`);\n  }\n}\n","import { Command } from 'commander';\nimport { FileSystemStorage } from './storage';\nimport { MedplumClient, normalizeErrorString } from '@medplum/core';\nimport dotenv from 'dotenv';\nimport { bot, createBotDeprecate, deployBotDeprecate, saveBotDeprecate } from './bots';\nimport { login, whoami } from './auth';\nimport { deleteObject, get, patch, post, put } from './rest';\nimport { project } from './projects';\n\nexport let medplum: MedplumClient;\n\nexport async function main(medplumClient: MedplumClient, argv: string[]): Promise<void> {\n  medplum = medplumClient;\n\n  // Legacy support for MEDPLUM_CLIENT_ID and MEDPLUM_CLIENT_SECRET environment variables\n  const clientId = process.env['MEDPLUM_CLIENT_ID'];\n  const clientSecret = process.env['MEDPLUM_CLIENT_SECRET'];\n  if (clientId && clientSecret) {\n    await medplum.startClientLogin(clientId, clientSecret);\n  }\n  try {\n    const index = new Command('medplum').description('Command to access Medplum CLI');\n    index.version('0.1.0');\n\n    // Auth commands\n    index.addCommand(login);\n    index.addCommand(whoami);\n\n    // REST commands\n    index.addCommand(get);\n    index.addCommand(post);\n    index.addCommand(patch);\n    index.addCommand(put);\n    index.addCommand(deleteObject);\n\n    // Project\n    index.addCommand(project);\n\n    // Bot Commands\n    index.addCommand(bot);\n\n    // Deprecated Bot Commands\n    index.addCommand(saveBotDeprecate);\n    index.addCommand(deployBotDeprecate);\n    index.addCommand(createBotDeprecate);\n\n    await index.parseAsync(argv);\n  } catch (err) {\n    console.error('Error: ' + normalizeErrorString(err));\n  }\n}\n\nif (require.main === module) {\n  dotenv.config();\n  const baseUrl = process.env['MEDPLUM_BASE_URL'] || 'https://api.medplum.com/';\n  const medplumClient = new MedplumClient({ fetch, baseUrl, storage: new FileSystemStorage() });\n  main(medplumClient, process.argv).catch((err) => console.error('Unhandled error:', 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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@medplum/cli",
-  "version": "2.0.14",
+  "version": "2.0.16",
   "description": "Medplum Command Line Interface",
   "author": "Medplum <hello@medplum.com>",
   "license": "Apache-2.0",
@@ -18,6 +18,7 @@
   },
   "dependencies": {
     "@medplum/core": "*",
+    "commander": "10.0.1",
     "dotenv": "16.0.3",
     "node-fetch": "2.6.9"
   },