@mcp-graph-workflow/mcp-graph 5.1.5 → 5.3.0

package/dist/core/rag/{serena-rag-query.js → memory-rag-query.js}

@@ -1,26 +1,30 @@
 /**
- * Serena RAG Query — semantic search over Serena memory documents.
+ * Memory RAG Query — semantic search over memory documents.
  *
  * Supports three modes:
  * - fts: keyword search via FTS5 (fast, exact match)
  * - semantic: TF-IDF cosine similarity (broader, cross-vocabulary)
  * - hybrid: combines FTS and semantic results with deduplication
+ *
+ * Accepts both "memory" and "serena" sourceType for backward compatibility.
  */
 import { KnowledgeStore } from "../store/knowledge-store.js";
 import { EmbeddingStore } from "./embedding-store.js";
 import { indexAllEmbeddings, semanticSearch } from "./rag-pipeline.js";
 import { logger } from "../utils/logger.js";
+/** Source types to include in memory queries (backward compat with "serena") */
+const MEMORY_SOURCE_TYPES = new Set(["memory", "serena"]);
 /**
- * Query Serena memories using FTS, semantic search, or hybrid.
+ * Query memories using FTS, semantic search, or hybrid.
  */
-export async function querySerenaMemories(store, query, options) {
+export async function queryMemories(store, query, options) {
     const mode = options?.mode ?? "fts";
     const limit = options?.limit ?? 10;
     const knowledgeStore = new KnowledgeStore(store.getDb());
-    const totalSerenaDocuments = knowledgeStore.count("serena");
-    if (totalSerenaDocuments === 0) {
-        logger.info("No Serena memories in knowledge store", { query });
-        return { query, mode, results: [], totalSerenaDocuments: 0 };
+    const totalMemoryDocuments = knowledgeStore.count("memory") + knowledgeStore.count("serena");
+    if (totalMemoryDocuments === 0) {
+        logger.info("No memories in knowledge store", { query });
+        return { query, mode, results: [], totalMemoryDocuments: 0 };
     }
     const results = [];
     const seenIds = new Set();
@@ -28,7 +32,7 @@ export async function querySerenaMemories(store, query, options) {
     if (mode === "fts" || mode === "hybrid") {
         const ftsResults = knowledgeStore.search(query, limit);
         for (const doc of ftsResults) {
-            if (doc.sourceType !== "serena")
+            if (!MEMORY_SOURCE_TYPES.has(doc.sourceType))
                 continue;
             if (seenIds.has(doc.id))
                 continue;
@@ -38,7 +42,7 @@ export async function querySerenaMemories(store, query, options) {
                 title: doc.title,
                 content: doc.content,
                 sourceId: doc.sourceId,
-                score: 1.0, // FTS results are relevance-ranked but no numeric score exposed
+                score: 1.0,
                 method: "fts",
             });
         }
@@ -50,11 +54,10 @@ export async function querySerenaMemories(store, query, options) {
         await indexAllEmbeddings(store, embeddingStore);
         const semanticResults = await semanticSearch(embeddingStore, query, limit);
         for (const result of semanticResults) {
-            // Filter to only serena-sourced knowledge
             if (result.source !== "knowledge")
                 continue;
             const doc = knowledgeStore.getById(result.sourceId);
-            if (!doc || doc.sourceType !== "serena")
+            if (!doc || !MEMORY_SOURCE_TYPES.has(doc.sourceType))
                 continue;
             if (seenIds.has(doc.id))
                 continue;
@@ -72,12 +75,12 @@ export async function querySerenaMemories(store, query, options) {
     // Sort by score descending and limit
     results.sort((a, b) => b.score - a.score);
     const limited = results.slice(0, limit);
-    logger.info("Serena RAG query completed", {
+    logger.info("Memory RAG query completed", {
         query,
         mode,
         resultsCount: limited.length,
-        totalSerenaDocuments,
+        totalMemoryDocuments,
     });
-    return { query, mode, results: limited, totalSerenaDocuments };
+    return { query, mode, results: limited, totalMemoryDocuments };
 }
-//# sourceMappingURL=serena-rag-query.js.map
+//# sourceMappingURL=memory-rag-query.js.map

package/dist/core/rag/memory-rag-query.js.map

@@ -0,0 +1 @@
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package/dist/core/rag/phase-metadata.d.ts

@@ -0,0 +1,23 @@
+/**
+ * Phase metadata utilities for knowledge indexers.
+ * Provides consistent phase tagging across all knowledge sources.
+ */
+import type { LifecyclePhase } from "../planner/lifecycle-phase.js";
+/**
+ * Phase boost weights for RAG search.
+ * Maps: current phase → source phase → boost multiplier.
+ * Higher boost = more relevant for the current phase.
+ */
+export declare const PHASE_BOOST_WEIGHTS: Record<LifecyclePhase, Partial<Record<LifecyclePhase, number>>>;
+/**
+ * Get the phase boost multiplier for a knowledge document in the current phase.
+ * Returns 1.0 (neutral) if no specific boost is defined.
+ */
+export declare function getPhaseBoost(currentPhase: LifecyclePhase, docPhase: string | undefined): number;
+/**
+ * Apply phase boost to a BM25 score.
+ * BM25 scores are negative (closer to 0 = better match).
+ * Boosting means dividing by the weight (making score closer to 0).
+ */
+export declare function applyPhaseBoost(score: number, boost: number): number;
+//# sourceMappingURL=phase-metadata.d.ts.map

package/dist/core/rag/phase-metadata.d.ts.map

@@ -0,0 +1 @@
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package/dist/core/rag/phase-metadata.js

@@ -0,0 +1,72 @@
+/**
+ * Phase metadata utilities for knowledge indexers.
+ * Provides consistent phase tagging across all knowledge sources.
+ */
+/**
+ * Phase boost weights for RAG search.
+ * Maps: current phase → source phase → boost multiplier.
+ * Higher boost = more relevant for the current phase.
+ */
+export const PHASE_BOOST_WEIGHTS = {
+    ANALYZE: {
+        ANALYZE: 2.0,
+        LISTENING: 1.5,
+    },
+    DESIGN: {
+        DESIGN: 2.0,
+        ANALYZE: 1.5,
+        PLAN: 1.2,
+    },
+    PLAN: {
+        PLAN: 2.0,
+        DESIGN: 1.5,
+        ANALYZE: 1.3,
+    },
+    IMPLEMENT: {
+        IMPLEMENT: 2.0,
+        PLAN: 1.5,
+        DESIGN: 1.2,
+    },
+    VALIDATE: {
+        VALIDATE: 2.0,
+        IMPLEMENT: 2.0,
+        ANALYZE: 1.3,
+    },
+    REVIEW: {
+        REVIEW: 2.0,
+        IMPLEMENT: 1.5,
+        VALIDATE: 2.0,
+    },
+    HANDOFF: {
+        HANDOFF: 2.0,
+        REVIEW: 1.5,
+        VALIDATE: 1.3,
+    },
+    LISTENING: {
+        LISTENING: 2.0,
+        ANALYZE: 1.5,
+        VALIDATE: 1.3,
+    },
+};
+/**
+ * Get the phase boost multiplier for a knowledge document in the current phase.
+ * Returns 1.0 (neutral) if no specific boost is defined.
+ */
+export function getPhaseBoost(currentPhase, docPhase) {
+    if (!docPhase)
+        return 1.0;
+    const weights = PHASE_BOOST_WEIGHTS[currentPhase];
+    return weights[docPhase] ?? 1.0;
+}
+/**
+ * Apply phase boost to a BM25 score.
+ * BM25 scores are negative (closer to 0 = better match).
+ * Boosting means dividing by the weight (making score closer to 0).
+ */
+export function applyPhaseBoost(score, boost) {
+    if (boost <= 0)
+        return score;
+    // BM25 scores are negative — dividing by boost makes them closer to 0 (better)
+    return score / boost;
+}
+//# sourceMappingURL=phase-metadata.js.map

package/dist/core/rag/phase-metadata.js.map

@@ -0,0 +1 @@
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package/dist/core/rag/phase-summary.d.ts

@@ -0,0 +1,17 @@
+/**
+ * Phase Summary Generator — creates a knowledge document summarizing
+ * what was accomplished during a lifecycle phase when transitioning out.
+ */
+import type { GraphDocument } from "../graph/graph-types.js";
+import type { LifecyclePhase } from "../planner/lifecycle-phase.js";
+import { KnowledgeStore } from "../store/knowledge-store.js";
+export interface PhaseSummaryResult {
+    indexed: boolean;
+    summaryText: string;
+}
+/**
+ * Generate and index a phase summary document into the knowledge store.
+ * Captures key metrics and decisions from the completed phase.
+ */
+export declare function generateAndIndexPhaseSummary(knowledgeStore: KnowledgeStore, doc: GraphDocument, fromPhase: LifecyclePhase, toPhase: LifecyclePhase): PhaseSummaryResult;
+//# sourceMappingURL=phase-summary.d.ts.map

package/dist/core/rag/phase-summary.d.ts.map

@@ -0,0 +1 @@
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package/dist/core/rag/phase-summary.js

@@ -0,0 +1,104 @@
+/**
+ * Phase Summary Generator — creates a knowledge document summarizing
+ * what was accomplished during a lifecycle phase when transitioning out.
+ */
+import { logger } from "../utils/logger.js";
+const TASK_TYPES = new Set(["task", "subtask"]);
+const DESIGN_TYPES = new Set(["decision", "constraint", "risk", "acceptance_criteria"]);
+/**
+ * Generate and index a phase summary document into the knowledge store.
+ * Captures key metrics and decisions from the completed phase.
+ */
+export function generateAndIndexPhaseSummary(knowledgeStore, doc, fromPhase, toPhase) {
+    const summaryText = buildPhaseSummaryText(doc, fromPhase, toPhase);
+    const sourceId = `phase_summary:${fromPhase}:${new Date().toISOString()}`;
+    try {
+        knowledgeStore.insert({
+            sourceType: "phase_summary",
+            sourceId,
+            title: `Phase ${fromPhase} Summary → ${toPhase}`,
+            content: summaryText,
+            metadata: {
+                phase: fromPhase,
+                transitionTo: toPhase,
+                transitionedAt: new Date().toISOString(),
+            },
+        });
+        logger.info("Phase summary indexed", { fromPhase, toPhase });
+        return { indexed: true, summaryText };
+    }
+    catch (err) {
+        logger.warn("Phase summary indexing failed", { error: String(err) });
+        return { indexed: false, summaryText };
+    }
+}
+/**
+ * Build a human-readable summary of what happened during a phase.
+ */
+function buildPhaseSummaryText(doc, fromPhase, toPhase) {
+    const { nodes, edges } = doc;
+    const tasks = nodes.filter((n) => TASK_TYPES.has(n.type));
+    const doneTasks = tasks.filter((n) => n.status === "done");
+    const inProgressTasks = tasks.filter((n) => n.status === "in_progress");
+    const designNodes = nodes.filter((n) => DESIGN_TYPES.has(n.type));
+    const sections = [];
+    sections.push(`Phase ${fromPhase} completed. Transitioning to ${toPhase}.`);
+    sections.push(`Total nodes: ${nodes.length}. Edges: ${edges.length}.`);
+    if (tasks.length > 0) {
+        sections.push(`Tasks: ${tasks.length} total, ${doneTasks.length} done, ${inProgressTasks.length} in progress, ${tasks.length - doneTasks.length - inProgressTasks.length} remaining.`);
+    }
+    // Phase-specific summaries
+    switch (fromPhase) {
+        case "ANALYZE": {
+            const requirements = nodes.filter((n) => n.type === "requirement");
+            const epics = nodes.filter((n) => n.type === "epic");
+            sections.push(`Requirements defined: ${requirements.length}. Epics: ${epics.length}.`);
+            break;
+        }
+        case "DESIGN": {
+            const decisions = designNodes.filter((n) => n.type === "decision");
+            const constraints = designNodes.filter((n) => n.type === "constraint");
+            const risks = designNodes.filter((n) => n.type === "risk");
+            sections.push(`Decisions: ${decisions.length}. Constraints: ${constraints.length}. Risks: ${risks.length}.`);
+            if (decisions.length > 0) {
+                const decisionTitles = decisions.map((d) => d.title).slice(0, 5);
+                sections.push(`Key decisions: ${decisionTitles.join("; ")}.`);
+            }
+            break;
+        }
+        case "PLAN": {
+            const sprintTasks = tasks.filter((n) => n.sprint != null);
+            const sprints = new Set(sprintTasks.map((n) => n.sprint));
+            sections.push(`Sprint-assigned tasks: ${sprintTasks.length} across ${sprints.size} sprint(s).`);
+            break;
+        }
+        case "IMPLEMENT": {
+            sections.push(`Tasks completed: ${doneTasks.length}/${tasks.length}.`);
+            const acNodes = nodes.filter((n) => n.type === "acceptance_criteria");
+            if (acNodes.length > 0) {
+                sections.push(`Acceptance criteria nodes: ${acNodes.length}.`);
+            }
+            break;
+        }
+        case "VALIDATE": {
+            const tasksWithAc = tasks.filter((n) => n.acceptanceCriteria && n.acceptanceCriteria.length > 0);
+            sections.push(`Tasks with acceptance criteria: ${tasksWithAc.length}/${tasks.length}.`);
+            break;
+        }
+        case "REVIEW": {
+            sections.push(`All tasks done: ${doneTasks.length === tasks.length ? "yes" : "no"}.`);
+            break;
+        }
+        case "HANDOFF": {
+            sections.push(`Handoff completed. ${doneTasks.length} tasks delivered.`);
+            break;
+        }
+        case "LISTENING": {
+            const feedbackNodes = nodes.filter((n) => n.type === "requirement" || n.type === "risk");
+            sections.push(`Feedback items collected: ${feedbackNodes.length}.`);
+            break;
+        }
+    }
+    return sections.join("\n");
+}
+//# sourceMappingURL=phase-summary.js.map

package/dist/core/rag/phase-summary.js.map

@@ -0,0 +1 @@
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package/dist/core/rag/prd-indexer.d.ts

@@ -0,0 +1,16 @@
+/**
+ * PRD Indexer — indexes PRD text content into the knowledge store
+ * so that original requirements can be queried in later lifecycle phases.
+ */
+import { KnowledgeStore } from "../store/knowledge-store.js";
+import type { LifecyclePhase } from "../planner/lifecycle-phase.js";
+export interface PrdIndexResult {
+    documentsIndexed: number;
+    sourceFile: string;
+}
+/**
+ * Index PRD text content into the knowledge store.
+ * Chunks the content and stores with source_type='prd'.
+ */
+export declare function indexPrdContent(knowledgeStore: KnowledgeStore, content: string, sourceFile: string, phase?: LifecyclePhase): PrdIndexResult;
+//# sourceMappingURL=prd-indexer.d.ts.map

package/dist/core/rag/prd-indexer.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"prd-indexer.d.ts","sourceRoot":"","sources":["../../../src/core/rag/prd-indexer.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAC;AAG7D,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,+BAA+B,CAAC;AAEpE,MAAM,WAAW,cAAc;IAC7B,gBAAgB,EAAE,MAAM,CAAC;IACzB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED;;;GAGG;AACH,wBAAgB,eAAe,CAC7B,cAAc,EAAE,cAAc,EAC9B,OAAO,EAAE,MAAM,EACf,UAAU,EAAE,MAAM,EAClB,KAAK,CAAC,EAAE,cAAc,GACrB,cAAc,CAiChB"}

package/dist/core/rag/prd-indexer.js

@@ -0,0 +1,37 @@
+/**
+ * PRD Indexer — indexes PRD text content into the knowledge store
+ * so that original requirements can be queried in later lifecycle phases.
+ */
+import { chunkText } from "./chunk-text.js";
+import { logger } from "../utils/logger.js";
+/**
+ * Index PRD text content into the knowledge store.
+ * Chunks the content and stores with source_type='prd'.
+ */
+export function indexPrdContent(knowledgeStore, content, sourceFile, phase) {
+    const chunks = chunkText(content);
+    if (chunks.length === 0) {
+        logger.info("No content to index from PRD", { sourceFile });
+        return { documentsIndexed: 0, sourceFile };
+    }
+    const sourceId = `prd:${sourceFile}`;
+    // Remove previous version to re-index fresh content
+    knowledgeStore.deleteBySource("prd", sourceId);
+    const docs = knowledgeStore.insertChunks(chunks.map((chunk) => ({
+        sourceType: "prd",
+        sourceId,
+        title: chunks.length > 1
+            ? `PRD: ${sourceFile} [${chunk.index + 1}/${chunks.length}]`
+            : `PRD: ${sourceFile}`,
+        content: chunk.content,
+        chunkIndex: chunk.index,
+        metadata: {
+            sourceFile,
+            phase: phase ?? "ANALYZE",
+            indexedAt: new Date().toISOString(),
+        },
+    })));
+    logger.info("PRD content indexed", { sourceFile, chunks: docs.length });
+    return { documentsIndexed: docs.length, sourceFile };
+}
+//# sourceMappingURL=prd-indexer.js.map

package/dist/core/rag/prd-indexer.js.map

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package/dist/core/rag/skill-indexer.d.ts

@@ -0,0 +1,16 @@
+/**
+ * Skill Indexer — indexes built-in skills and filesystem skills
+ * into the knowledge store for unified search.
+ */
+import { KnowledgeStore } from "../store/knowledge-store.js";
+export interface SkillIndexResult {
+    builtInIndexed: number;
+    filesystemIndexed: number;
+    skippedDuplicates: number;
+}
+/**
+ * Index all skills (built-in + filesystem) into the knowledge store.
+ * Uses sourceType: "skill" and sourceId: "skill:{name}".
+ */
+export declare function indexSkills(knowledgeStore: KnowledgeStore, basePath: string): Promise<SkillIndexResult>;
+//# sourceMappingURL=skill-indexer.d.ts.map

package/dist/core/rag/skill-indexer.d.ts.map

@@ -0,0 +1 @@
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package/dist/core/rag/skill-indexer.js

@@ -0,0 +1,98 @@
+/**
+ * Skill Indexer — indexes built-in skills and filesystem skills
+ * into the knowledge store for unified search.
+ */
+import { getBuiltInSkills } from "../skills/built-in-skills.js";
+import { scanSkills } from "../insights/skill-recommender.js";
+import { chunkText } from "./chunk-text.js";
+import { logger } from "../utils/logger.js";
+/**
+ * Index all skills (built-in + filesystem) into the knowledge store.
+ * Uses sourceType: "skill" and sourceId: "skill:{name}".
+ */
+export async function indexSkills(knowledgeStore, basePath) {
+    let builtInIndexed = 0;
+    let filesystemIndexed = 0;
+    let skippedDuplicates = 0;
+    // Index built-in skills
+    const builtInSkills = getBuiltInSkills();
+    for (const skill of builtInSkills) {
+        const content = formatSkillContent(skill);
+        const countBefore = knowledgeStore.count("skill");
+        knowledgeStore.insert({
+            sourceType: "skill",
+            sourceId: `skill:${skill.name}`,
+            title: skill.name,
+            content,
+            chunkIndex: 0,
+            metadata: {
+                category: skill.category,
+                phases: skill.phases,
+                description: skill.description,
+                source: "built-in",
+            },
+        });
+        if (knowledgeStore.count("skill") > countBefore) {
+            builtInIndexed++;
+        }
+        else {
+            skippedDuplicates++;
+        }
+    }
+    // Index filesystem skills
+    try {
+        const fsSkills = await scanSkills(basePath);
+        for (const fsSkill of fsSkills) {
+            // Skip if already indexed as built-in
+            const isBuiltIn = builtInSkills.some((b) => b.name === fsSkill.name);
+            if (isBuiltIn)
+                continue;
+            const content = `# ${fsSkill.name}\n\n${fsSkill.description}\n\nCategory: ${fsSkill.category}`;
+            const chunks = chunkText(content);
+            const countBefore = knowledgeStore.count("skill");
+            for (const chunk of chunks) {
+                knowledgeStore.insert({
+                    sourceType: "skill",
+                    sourceId: `skill:${fsSkill.name}`,
+                    title: chunks.length > 1
+                        ? `${fsSkill.name} [${chunk.index + 1}/${chunks.length}]`
+                        : fsSkill.name,
+                    content: chunk.content,
+                    chunkIndex: chunk.index,
+                    metadata: {
+                        category: fsSkill.category,
+                        description: fsSkill.description,
+                        filePath: fsSkill.filePath,
+                        source: "filesystem",
+                    },
+                });
+            }
+            if (knowledgeStore.count("skill") > countBefore) {
+                filesystemIndexed++;
+            }
+            else {
+                skippedDuplicates++;
+            }
+        }
+    }
+    catch {
+        logger.debug("skill-indexer: filesystem scan skipped (no skills directory)");
+    }
+    logger.info("Skills indexed", { builtInIndexed, filesystemIndexed, skippedDuplicates });
+    return { builtInIndexed, filesystemIndexed, skippedDuplicates };
+}
+function formatSkillContent(skill) {
+    return [
+        `# ${skill.name}`,
+        "",
+        skill.description,
+        "",
+        `Category: ${skill.category}`,
+        `Phases: ${skill.phases.join(", ")}`,
+        "",
+        "## Instructions",
+        "",
+        skill.instructions,
+    ].join("\n");
+}
+//# sourceMappingURL=skill-indexer.js.map

package/dist/core/rag/skill-indexer.js.map

@@ -0,0 +1 @@
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package/dist/core/reviewer/review-readiness.d.ts

@@ -0,0 +1,8 @@
+/**
+ * Review Readiness — composite gate for VALIDATE→REVIEW transition.
+ * 100% reuse of existing analyzers, no new helper modules.
+ */
+import type { GraphDocument } from "../graph/graph-types.js";
+import type { ReviewReadinessReport } from "../../schemas/reviewer-schema.js";
+export declare function checkReviewReadiness(doc: GraphDocument): ReviewReadinessReport;
+//# sourceMappingURL=review-readiness.d.ts.map

package/dist/core/reviewer/review-readiness.d.ts.map

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