@matperez/coderag 0.1.24

package/dist/storage-persistent-pg.js.map

@@ -0,0 +1 @@
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package/dist/storage-persistent-pg.test.d.ts

@@ -0,0 +1,7 @@
+/**
+ * Postgres persistent storage integration tests.
+ * Run with DATABASE_URL set (e.g. postgresql://coderag:secret@localhost:5432/coderag).
+ * Skip when DATABASE_URL is not set.
+ */
+export {};
+//# sourceMappingURL=storage-persistent-pg.test.d.ts.map

package/dist/storage-persistent-pg.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"storage-persistent-pg.test.d.ts","sourceRoot":"","sources":["../src/storage-persistent-pg.test.ts"],"names":[],"mappings":"AAAA;;;;GAIG"}

package/dist/storage-persistent-pg.test.js

@@ -0,0 +1,90 @@
+/**
+ * Postgres persistent storage integration tests.
+ * Run with DATABASE_URL set (e.g. postgresql://coderag:secret@localhost:5432/coderag).
+ * Skip when DATABASE_URL is not set.
+ */
+import { afterAll, describe, expect, it } from 'vitest';
+import { createPostgresPersistentStorage } from './storage-persistent-pg.js';
+const DATABASE_URL = process.env.DATABASE_URL;
+describe.skipIf(!DATABASE_URL)('PostgresPersistentStorage (set DATABASE_URL to run)', () => {
+    const storage = createPostgresPersistentStorage({
+        backend: 'postgres',
+        connectionString: DATABASE_URL,
+    });
+    afterAll(async () => {
+        storage.close?.();
+    });
+    it('getBackend returns postgres', () => {
+        expect(storage.getBackend()).toBe('postgres');
+    });
+    it('storeFile and getFile', async () => {
+        await storage.clear();
+        const file = {
+            path: 'pg-test.ts',
+            content: 'export const x = 1',
+            hash: 'h1',
+            size: 20,
+            mtime: Date.now(),
+            language: 'typescript',
+        };
+        await storage.storeFile(file);
+        const retrieved = await storage.getFile('pg-test.ts');
+        expect(retrieved).not.toBeNull();
+        expect(retrieved?.content).toBe('export const x = 1');
+    });
+    it('storeChunks and getChunksForFile', async () => {
+        await storage.clear();
+        const file = {
+            path: 'chunked.ts',
+            content: 'function a() {}\nfunction b() {}',
+            hash: 'h2',
+            size: 30,
+            mtime: Date.now(),
+        };
+        await storage.storeFile(file);
+        const ids = await storage.storeChunks('chunked.ts', [
+            { content: 'function a() {}', type: 'FunctionDeclaration', startLine: 1, endLine: 1 },
+            { content: 'function b() {}', type: 'FunctionDeclaration', startLine: 2, endLine: 2 },
+        ]);
+        expect(ids.length).toBe(2);
+        const chunks = await storage.getChunksForFile('chunked.ts');
+        expect(chunks.length).toBe(2);
+    });
+    it('storeManyChunks and storeManyChunkVectors', async () => {
+        await storage.clear();
+        await storage.storeFile({
+            path: 'f1.ts',
+            content: 'x',
+            hash: '1',
+            size: 1,
+            mtime: Date.now(),
+        });
+        await storage.storeFile({
+            path: 'f2.ts',
+            content: 'y',
+            hash: '2',
+            size: 1,
+            mtime: Date.now(),
+        });
+        const map = await storage.storeManyChunks([
+            { filePath: 'f1.ts', chunks: [{ content: 'x', type: 't', startLine: 1, endLine: 1 }] },
+            { filePath: 'f2.ts', chunks: [{ content: 'y', type: 't', startLine: 1, endLine: 1 }] },
+        ]);
+        expect(map.get('f1.ts')?.length).toBe(1);
+        expect(map.get('f2.ts')?.length).toBe(1);
+        const chunkId1 = map.get('f1.ts')[0];
+        await storage.storeManyChunkVectors([
+            {
+                chunkId: chunkId1,
+                terms: new Map([['x', { tf: 1, tfidf: 0, rawFreq: 1 }]]),
+                tokenCount: 1,
+            },
+        ]);
+        await storage.rebuildIdfScoresFromVectors();
+        await storage.recalculateTfidfScores();
+        await storage.updateChunkMagnitudes();
+        const count = await storage.getChunkCount();
+        expect(count).toBe(2);
+    });
+});
+//# sourceMappingURL=storage-persistent-pg.test.js.map

package/dist/storage-persistent-pg.test.js.map

@@ -0,0 +1 @@
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package/dist/storage-persistent-types.d.ts

@@ -0,0 +1,110 @@
+/**
+ * Types and interface for persistent chunk storage (SQLite and Postgres backends)
+ */
+import type { Storage } from './storage.js';
+/** Chunk data for storage */
+export interface ChunkData {
+    content: string;
+    type: string;
+    startLine: number;
+    endLine: number;
+    metadata?: Record<string, unknown>;
+}
+/** Stored chunk with ID */
+export interface StoredChunk extends ChunkData {
+    id: number;
+    fileId: number;
+    filePath: string;
+}
+/** SQLite backend config (default when no backend specified) */
+export interface SqliteDbConfig {
+    backend?: 'sqlite';
+    dbPath?: string;
+    codebaseRoot?: string;
+}
+/** Postgres config: connection string or separate fields; env fallback in implementation */
+export type PostgresDbConfig = {
+    backend: 'postgres';
+} & ({
+    connectionString: string;
+} | {
+    host?: string;
+    port?: number;
+    database?: string;
+    user?: string;
+    password?: string;
+    ssl?: boolean;
+});
+/** Config for createPersistentStorage */
+export type PersistentStorageConfig = SqliteDbConfig | PostgresDbConfig;
+/** Result item for searchByTerms */
+export interface SearchByTermsResultItem {
+    chunkId: number;
+    filePath: string;
+    content: string;
+    type: string;
+    startLine: number;
+    endLine: number;
+    matchedTerms: Map<string, {
+        tfidf: number;
+        rawFreq: number;
+    }>;
+    magnitude: number;
+    tokenCount: number;
+}
+/**
+ * Persistent storage with chunk-level indexing (files, chunks, vectors, IDF).
+ * Implemented by SQLite (PersistentStorage) and Postgres (PostgresPersistentStorage).
+ */
+export interface PersistentChunkStorage extends Storage {
+    getBackend(): 'sqlite' | 'postgres';
+    storeChunks(filePath: string, chunks: ChunkData[]): Promise<number[]>;
+    storeManyChunks(fileChunks: Array<{
+        filePath: string;
+        chunks: ChunkData[];
+    }>): Promise<Map<string, number[]>>;
+    getChunksForFile(filePath: string): Promise<StoredChunk[]>;
+    getChunkCount(): Promise<number>;
+    storeChunkVectors(chunkId: number, terms: Map<string, {
+        tf: number;
+        tfidf: number;
+        rawFreq: number;
+    }>, tokenCount?: number): Promise<void>;
+    storeManyChunkVectors(chunkVectors: Array<{
+        chunkId: number;
+        terms: Map<string, {
+            tf: number;
+            tfidf: number;
+            rawFreq: number;
+        }>;
+        tokenCount?: number;
+    }>): Promise<void>;
+    storeIdfScores(idf: Map<string, number>, docFreq: Map<string, number>): Promise<void>;
+    getIdfScores(): Promise<Map<string, number>>;
+    getChunkVectors(chunkId: number): Promise<Map<string, {
+        tf: number;
+        tfidf: number;
+        rawFreq: number;
+    }> | null>;
+    getIdfScoresForTerms(terms: string[]): Promise<Map<string, number>>;
+    getTotalDocuments(): Promise<number>;
+    getAllFileMetadata(): Promise<Map<string, {
+        mtime: number;
+        hash: string;
+    }>>;
+    deleteFiles(paths: string[]): Promise<void>;
+    setMetadata(key: string, value: string): Promise<void>;
+    getMetadata(key: string): Promise<string | null>;
+    getAverageDocLength(): Promise<number>;
+    updateAverageDocLength(): Promise<number>;
+    rebuildIdfScoresFromVectors(): Promise<void>;
+    recalculateTfidfScores(): Promise<void>;
+    updateChunkMagnitudes(): Promise<void>;
+    getTermsForFiles(paths: string[]): Promise<Set<string>>;
+    searchByTerms(queryTerms: string[], options?: {
+        limit?: number;
+    }): Promise<SearchByTermsResultItem[]>;
+    getAllChunks(): Promise<StoredChunk[]>;
+    close?(): void;
+}
+//# sourceMappingURL=storage-persistent-types.d.ts.map

package/dist/storage-persistent-types.d.ts.map

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package/dist/storage-persistent-types.js

@@ -0,0 +1,5 @@
+/**
+ * Types and interface for persistent chunk storage (SQLite and Postgres backends)
+ */
+export {};
+//# sourceMappingURL=storage-persistent-types.js.map

package/dist/storage-persistent-types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"storage-persistent-types.js","sourceRoot":"","sources":["../src/storage-persistent-types.ts"],"names":[],"mappings":"AAAA;;GAEG"}

package/dist/storage-persistent.d.ts

@@ -0,0 +1,231 @@
+/**
+ * Persistent storage implementation using SQLite + Drizzle ORM (LibSQL WASM-compatible)
+ * Now supports chunk-level indexing for better search granularity
+ */
+import { type DbConfig } from './db/client.js';
+import type { CodebaseFile, Storage } from './storage.js';
+/**
+ * Chunk data for storage
+ */
+export interface ChunkData {
+    content: string;
+    type: string;
+    startLine: number;
+    endLine: number;
+    metadata?: Record<string, unknown>;
+}
+/**
+ * Stored chunk with ID
+ */
+export interface StoredChunk extends ChunkData {
+    id: number;
+    fileId: number;
+    filePath: string;
+}
+export declare class PersistentStorage implements Storage {
+    private dbInstance;
+    private initPromise;
+    private useBulkInsertChunks;
+    constructor(config?: DbConfig);
+    private initialize;
+    /**
+     * Ensure database is initialized before operations
+     */
+    private ensureInit;
+    /**
+     * Get the LibSQL client for raw SQL operations
+     */
+    private get client();
+    /**
+     * Store a file
+     */
+    storeFile(file: CodebaseFile): Promise<void>;
+    /**
+     * Store multiple files in a single transaction (batch operation)
+     * Much faster than storing one by one for large datasets
+     */
+    storeFiles(files: CodebaseFile[]): Promise<void>;
+    /**
+     * Get a file by path
+     */
+    getFile(path: string): Promise<CodebaseFile | null>;
+    /**
+     * Get all files
+     */
+    getAllFiles(): Promise<CodebaseFile[]>;
+    /**
+     * Get path -> hash for all files (for skip-unchanged during full index)
+     */
+    getFileHashes(): Promise<Map<string, string>>;
+    /**
+     * Delete a file
+     */
+    deleteFile(path: string): Promise<void>;
+    /**
+     * Clear all files
+     */
+    clear(): Promise<void>;
+    /**
+     * Store chunks for a file (replaces existing chunks)
+     */
+    storeChunks(filePath: string, chunks: ChunkData[]): Promise<number[]>;
+    /**
+     * Store chunks for multiple files in batch
+     */
+    storeManyChunks(fileChunks: Array<{
+        filePath: string;
+        chunks: ChunkData[];
+    }>): Promise<Map<string, number[]>>;
+    /**
+     * Get chunks for a file
+     */
+    getChunksForFile(filePath: string): Promise<StoredChunk[]>;
+    /**
+     * Get total chunk count
+     */
+    getChunkCount(): Promise<number>;
+    /**
+     * Get file count
+     */
+    count(): Promise<number>;
+    /**
+     * Check if file exists
+     */
+    exists(path: string): Promise<boolean>;
+    /**
+     * Store document vectors (TF-IDF) for a CHUNK
+     */
+    storeChunkVectors(chunkId: number, terms: Map<string, {
+        tf: number;
+        tfidf: number;
+        rawFreq: number;
+    }>, tokenCount?: number): Promise<void>;
+    /**
+     * Store document vectors for multiple CHUNKS in a single transaction (batch operation)
+     * Much faster than storing one by one for large datasets
+     */
+    storeManyChunkVectors(chunkVectors: Array<{
+        chunkId: number;
+        terms: Map<string, {
+            tf: number;
+            tfidf: number;
+            rawFreq: number;
+        }>;
+        tokenCount?: number;
+    }>): Promise<void>;
+    /**
+     * Store IDF scores
+     */
+    storeIdfScores(idf: Map<string, number>, docFreq: Map<string, number>): Promise<void>;
+    /**
+     * Get IDF scores
+     */
+    getIdfScores(): Promise<Map<string, number>>;
+    /**
+     * Get document vectors for a chunk
+     */
+    getChunkVectors(chunkId: number): Promise<Map<string, {
+        tf: number;
+        tfidf: number;
+        rawFreq: number;
+    }> | null>;
+    /**
+     * Get all chunk vectors in a single batch query (CPU + Memory optimization)
+     * Avoids N+1 query pattern when loading index from storage
+     * Returns Map<chunkId, Map<term, {tf, tfidf, rawFreq}>>
+     */
+    getAllChunkVectors(): Promise<Map<number, Map<string, {
+        tf: number;
+        tfidf: number;
+        rawFreq: number;
+    }>>>;
+    /**
+     * Search chunks by terms using SQL (Memory optimization)
+     * Returns matching chunks with their content for direct display
+     * Uses pre-computed magnitude from chunks table
+     */
+    searchByTerms(queryTerms: string[], options?: {
+        limit?: number;
+    }): Promise<Array<{
+        chunkId: number;
+        filePath: string;
+        content: string;
+        type: string;
+        startLine: number;
+        endLine: number;
+        matchedTerms: Map<string, {
+            tfidf: number;
+            rawFreq: number;
+        }>;
+        magnitude: number;
+        tokenCount: number;
+    }>>;
+    /**
+     * Get IDF scores for specific terms only (Memory optimization)
+     */
+    getIdfScoresForTerms(terms: string[]): Promise<Map<string, number>>;
+    /**
+     * Get total chunk count (for IDF calculation)
+     * BM25/TF-IDF now operates at chunk level, not file level
+     */
+    getTotalDocuments(): Promise<number>;
+    /**
+     * Get all file metadata (path, mtime, hash) without content
+     * Used for incremental diff detection
+     */
+    getAllFileMetadata(): Promise<Map<string, {
+        mtime: number;
+        hash: string;
+    }>>;
+    /**
+     * Delete multiple files in a single transaction (batch operation)
+     */
+    deleteFiles(paths: string[]): Promise<void>;
+    /**
+     * Store metadata
+     */
+    setMetadata(key: string, value: string): Promise<void>;
+    /**
+     * Get metadata
+     */
+    getMetadata(key: string): Promise<string | null>;
+    /**
+     * Get average chunk length (token count) for BM25 scoring
+     * Returns cached value from metadata if available, otherwise calculates from chunks table
+     */
+    getAverageDocLength(): Promise<number>;
+    /**
+     * Update average chunk length in metadata (call after indexing)
+     */
+    updateAverageDocLength(): Promise<number>;
+    /**
+     * Rebuild IDF scores from document vectors using SQL (Memory optimization)
+     * Calculates document frequency for each term across CHUNKS and computes IDF
+     */
+    rebuildIdfScoresFromVectors(): Promise<void>;
+    /**
+     * Recalculate TF-IDF scores for all documents using current IDF values (Memory optimization)
+     * Updates document_vectors.tfidf = document_vectors.tf * idf_scores.idf
+     */
+    recalculateTfidfScores(): Promise<void>;
+    /**
+     * Update pre-computed magnitude for all chunks (Memory optimization for search)
+     * magnitude = sqrt(sum(tfidf^2)) for each chunk
+     * Called after TF-IDF recalculation to keep magnitude in sync
+     */
+    updateChunkMagnitudes(): Promise<void>;
+    /**
+     * Get terms for chunks of files (for tracking affected terms during incremental updates)
+     * When files are deleted, we need to know which terms were affected
+     */
+    getTermsForFiles(paths: string[]): Promise<Set<string>>;
+    /**
+     * Get all chunks with their file paths (for bulk operations)
+     */
+    getAllChunks(): Promise<StoredChunk[]>;
+    /**
+     * Close database connection
+     */
+    close(): void;
+}
+//# sourceMappingURL=storage-persistent.d.ts.map

package/dist/storage-persistent.d.ts.map

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