@mat3ra/wode 2026.4.9-0 → 2026.5.29-0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.babelrc +1 -1
- package/dist/js/Subworkflow.d.ts +714 -0
- package/dist/js/Subworkflow.js +397 -0
- package/dist/js/Workflow.d.ts +82 -0
- package/dist/js/Workflow.js +286 -0
- package/dist/js/WorkflowDesignerMaterial.d.ts +21 -0
- package/dist/js/WorkflowDesignerMaterial.js +26 -0
- package/dist/js/context/mixins/ApplicationContextMixin.d.ts +10 -0
- package/dist/js/context/mixins/ApplicationContextMixin.js +10 -17
- package/dist/js/context/mixins/MaterialContextMixin.d.ts +18 -0
- package/dist/js/context/mixins/MaterialContextMixin.js +14 -38
- package/dist/js/context/mixins/MaterialsContextMixin.d.ts +10 -0
- package/dist/js/context/mixins/MaterialsContextMixin.js +11 -17
- package/dist/js/context/mixins/MaterialsSetContextMixin.d.ts +14 -0
- package/dist/js/context/mixins/MaterialsSetContextMixin.js +21 -23
- package/dist/js/context/providers/BoundaryConditionsFormDataManager.d.ts +30 -0
- package/dist/js/context/providers/BoundaryConditionsFormDataManager.js +62 -0
- package/dist/js/context/providers/CollinearMagnetizationDataManager.d.ts +42 -0
- package/dist/js/context/providers/CollinearMagnetizationDataManager.js +101 -0
- package/dist/js/context/providers/Hubbard/HubbardContextManagerLegacy.d.ts +29 -0
- package/dist/js/context/providers/Hubbard/HubbardContextManagerLegacy.js +69 -0
- package/dist/js/context/providers/Hubbard/HubbardContextProvider.d.ts +20 -0
- package/dist/js/context/providers/Hubbard/HubbardContextProvider.js +47 -0
- package/dist/js/context/providers/Hubbard/HubbardJContextManager.d.ts +22 -0
- package/dist/js/context/providers/Hubbard/HubbardJContextManager.js +61 -0
- package/dist/js/context/providers/Hubbard/HubbardUContextManager.d.ts +22 -0
- package/dist/js/context/providers/Hubbard/HubbardUContextManager.js +57 -0
- package/dist/js/context/providers/Hubbard/HubbardVContextManager.d.ts +22 -0
- package/dist/js/context/providers/Hubbard/HubbardVContextManager.js +79 -0
- package/dist/js/context/providers/IonDynamicsDataManager.d.ts +27 -0
- package/dist/js/context/providers/IonDynamicsDataManager.js +48 -0
- package/dist/js/context/providers/MLSettingsDataManager.d.ts +24 -0
- package/dist/js/context/providers/MLSettingsDataManager.js +42 -0
- package/dist/js/context/providers/MLTrainTestSplitDataManager.d.ts +23 -0
- package/dist/js/context/providers/MLTrainTestSplitDataManager.js +40 -0
- package/dist/js/context/providers/NEBFormDataManager.d.ts +23 -0
- package/dist/js/context/providers/NEBFormDataManager.js +39 -0
- package/dist/js/context/providers/NonCollinearMagnetizationDataManager.d.ts +78 -0
- package/dist/js/context/providers/NonCollinearMagnetizationDataManager.js +181 -0
- package/dist/js/context/providers/PlanewaveCutoffDataManager.d.ts +26 -0
- package/dist/js/context/providers/PlanewaveCutoffDataManager.js +69 -0
- package/dist/js/context/providers/PointsGrid/IGridFormDataManager.d.ts +13 -0
- package/dist/js/context/providers/PointsGrid/IGridFormDataManager.js +23 -0
- package/dist/js/context/providers/PointsGrid/KGridFormDataManager.d.ts +15 -0
- package/dist/js/context/providers/PointsGrid/KGridFormDataManager.js +30 -0
- package/dist/js/context/providers/PointsGrid/PointsGridFormDataProvider.d.ts +171 -0
- package/dist/js/context/providers/PointsGrid/PointsGridFormDataProvider.js +270 -0
- package/dist/js/context/providers/PointsGrid/QGridFormDataManager.d.ts +13 -0
- package/dist/js/context/providers/PointsGrid/QGridFormDataManager.js +23 -0
- package/dist/js/context/providers/PointsPath/ExplicitKPath2PIBAFormDataManager.d.ts +10 -0
- package/dist/js/context/providers/PointsPath/ExplicitKPath2PIBAFormDataManager.js +19 -0
- package/dist/js/context/providers/PointsPath/ExplicitKPathFormDataManager.d.ts +9 -0
- package/dist/js/context/providers/PointsPath/ExplicitKPathFormDataManager.js +18 -0
- package/dist/js/context/providers/PointsPath/IPathFormDataManager.d.ts +8 -0
- package/dist/js/context/providers/PointsPath/IPathFormDataManager.js +17 -0
- package/dist/js/context/providers/PointsPath/KPathFormDataManager.d.ts +8 -0
- package/dist/js/context/providers/PointsPath/KPathFormDataManager.js +17 -0
- package/dist/js/context/providers/PointsPath/PointsPathFormDataProvider.d.ts +40 -0
- package/dist/js/context/providers/PointsPath/PointsPathFormDataProvider.js +125 -0
- package/dist/js/context/providers/PointsPath/QPathFormDataManager.d.ts +8 -0
- package/dist/js/context/providers/PointsPath/QPathFormDataManager.js +17 -0
- package/dist/js/context/providers/base/ContextProvider.d.ts +75 -0
- package/dist/js/context/providers/base/ContextProvider.js +87 -0
- package/dist/js/context/providers/base/JSONSchemaDataProvider.d.ts +16 -0
- package/dist/js/context/providers/base/JSONSchemaDataProvider.js +17 -0
- package/dist/js/context/providers/base/JSONSchemaFormDataProvider.d.ts +19 -0
- package/dist/js/context/providers/base/JSONSchemaFormDataProvider.js +32 -0
- package/dist/js/context/providers/by_application/espresso/QENEBInputDataManager.d.ts +26 -0
- package/dist/js/context/providers/by_application/espresso/QENEBInputDataManager.js +54 -0
- package/dist/js/context/providers/by_application/espresso/QEPWXInputDataManager.d.ts +78 -0
- package/dist/js/context/providers/by_application/espresso/QEPWXInputDataManager.js +104 -0
- package/dist/js/context/providers/by_application/nwchem/NWChemInputDataManager.d.ts +36 -0
- package/dist/js/context/providers/by_application/nwchem/NWChemInputDataManager.js +58 -0
- package/dist/js/context/providers/by_application/vasp/VASPInputDataManager.d.ts +36 -0
- package/dist/js/context/providers/by_application/vasp/VASPInputDataManager.js +56 -0
- package/dist/js/context/providers/by_application/vasp/VASPNEBInputDataManager.d.ts +30 -0
- package/dist/js/context/providers/by_application/vasp/VASPNEBInputDataManager.js +50 -0
- package/dist/js/context/providers/index.d.ts +92 -0
- package/dist/js/context/providers/index.js +107 -0
- package/dist/js/context/providers/settings.d.ts +7 -0
- package/dist/js/context/providers/settings.js +11 -33
- package/dist/js/convergence/ConvergenceParameter.d.ts +26 -0
- package/dist/js/convergence/ConvergenceParameter.js +13 -0
- package/dist/js/convergence/NonUniformKGridConvergence.d.ts +12 -0
- package/dist/js/convergence/NonUniformKGridConvergence.js +31 -0
- package/dist/js/convergence/UniformKGridConvergence.d.ts +8 -0
- package/dist/js/convergence/UniformKGridConvergence.js +22 -0
- package/dist/js/convergence/factory.d.ts +8 -0
- package/dist/js/convergence/factory.js +18 -0
- package/dist/js/enums.d.ts +62 -0
- package/dist/js/enums.js +66 -61
- package/dist/js/generated/AssertionUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/AssertionUnitSchemaMixin.js +27 -0
- package/dist/js/generated/AssignmentUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/AssignmentUnitSchemaMixin.js +33 -0
- package/dist/js/generated/BaseUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/BaseUnitSchemaMixin.js +57 -0
- package/dist/js/generated/ConditionUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/ConditionUnitSchemaMixin.js +51 -0
- package/dist/js/generated/ExecutionUnitInputSchemaMixin.d.ts +5 -0
- package/dist/js/generated/ExecutionUnitInputSchemaMixin.js +27 -0
- package/dist/js/generated/ExecutionUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/ExecutionUnitSchemaMixin.js +45 -0
- package/dist/js/generated/IOUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/IOUnitSchemaMixin.js +33 -0
- package/dist/js/generated/MapUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/MapUnitSchemaMixin.js +27 -0
- package/dist/js/generated/ReduceUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/ReduceUnitSchemaMixin.js +27 -0
- package/dist/js/generated/StatusSchemaMixin.d.ts +5 -0
- package/dist/js/generated/StatusSchemaMixin.js +21 -0
- package/dist/js/generated/SubworkflowSchemaMixin.d.ts +5 -0
- package/dist/js/generated/SubworkflowSchemaMixin.js +51 -0
- package/dist/js/generated/SubworkflowUnitSchemaMixin.d.ts +5 -0
- package/dist/js/generated/SubworkflowUnitSchemaMixin.js +15 -0
- package/dist/js/generated/WorkflowSchemaMixin.d.ts +5 -0
- package/dist/js/generated/WorkflowSchemaMixin.js +51 -0
- package/dist/js/index.d.ts +13 -0
- package/dist/js/index.js +66 -176
- package/dist/js/units/AssertionUnit.d.ts +20 -0
- package/dist/js/units/AssertionUnit.js +33 -0
- package/dist/js/units/AssignmentUnit.d.ts +17 -0
- package/dist/js/units/AssignmentUnit.js +35 -0
- package/dist/js/units/BaseUnit.d.ts +39 -0
- package/dist/js/units/BaseUnit.js +70 -0
- package/dist/js/units/ConditionUnit.d.ts +17 -0
- package/dist/js/units/ConditionUnit.js +37 -0
- package/dist/js/units/ExecutionUnit.d.ts +115 -0
- package/dist/js/units/ExecutionUnit.js +181 -0
- package/dist/js/units/ExecutionUnitInput.d.ts +22 -0
- package/dist/js/units/ExecutionUnitInput.js +47 -0
- package/dist/js/units/IOUnit.d.ts +16 -0
- package/dist/js/units/IOUnit.js +31 -0
- package/dist/js/units/MapUnit.d.ts +34 -0
- package/dist/js/units/MapUnit.js +46 -0
- package/dist/js/units/ReduceUnit.d.ts +16 -0
- package/dist/js/units/ReduceUnit.js +30 -0
- package/dist/js/units/SubworkflowUnit.d.ts +16 -0
- package/dist/js/units/SubworkflowUnit.js +28 -0
- package/dist/js/units/factory.d.ts +31 -0
- package/dist/js/units/factory.js +65 -47
- package/dist/js/units/index.d.ts +14 -0
- package/dist/js/units/index.js +25 -81
- package/dist/js/units/mixins/RuntimeItemsUILogicMixin.d.ts +26 -0
- package/dist/js/units/mixins/RuntimeItemsUILogicMixin.js +50 -0
- package/dist/js/utils/baseUnits.d.ts +2 -0
- package/dist/js/utils/baseUnits.js +11 -0
- package/dist/js/utils/index.d.ts +3 -0
- package/dist/js/utils/index.js +39 -0
- package/dist/js/utils/subworkflow.d.ts +2 -0
- package/dist/js/utils/subworkflow.js +29 -0
- package/dist/js/utils/underscoreStringSlugify.d.ts +6 -0
- package/dist/js/utils/underscoreStringSlugify.js +32 -0
- package/dist/js/utils/units.d.ts +4 -0
- package/dist/js/utils/units.js +16 -0
- package/dist/js/utils/workflow.d.ts +9 -0
- package/dist/js/utils/workflow.js +67 -0
- package/dist/js/utils.js +2 -7
- package/dist/js/workflows/default.d.ts +3 -0
- package/dist/js/workflows/default.js +43 -39
- package/dist/js/workflows/workflow.d.ts +4404 -0
- package/dist/js/workflows/workflow.js +310 -306
- package/package.json +56 -44
- package/src/js/Subworkflow.ts +532 -0
- package/src/js/Workflow.ts +390 -0
- package/src/js/context/mixins/ApplicationContextMixin.ts +21 -0
- package/src/js/context/mixins/MaterialContextMixin.ts +35 -0
- package/src/js/context/mixins/MaterialsContextMixin.ts +24 -0
- package/src/js/context/mixins/MaterialsSetContextMixin.ts +42 -0
- package/src/js/context/providers/BoundaryConditionsFormDataManager.ts +88 -0
- package/src/js/context/providers/CollinearMagnetizationDataManager.ts +140 -0
- package/src/js/context/providers/Hubbard/HubbardContextManagerLegacy.ts +93 -0
- package/src/js/context/providers/Hubbard/HubbardContextProvider.ts +85 -0
- package/src/js/context/providers/Hubbard/HubbardJContextManager.ts +82 -0
- package/src/js/context/providers/Hubbard/HubbardUContextManager.ts +78 -0
- package/src/js/context/providers/Hubbard/HubbardVContextManager.ts +100 -0
- package/src/js/context/providers/IonDynamicsDataManager.ts +64 -0
- package/src/js/context/providers/MLSettingsDataManager.ts +61 -0
- package/src/js/context/providers/MLTrainTestSplitDataManager.ts +59 -0
- package/src/js/context/providers/NEBFormDataManager.ts +57 -0
- package/src/js/context/providers/NonCollinearMagnetizationDataManager.ts +229 -0
- package/src/js/context/providers/PlanewaveCutoffDataManager.ts +110 -0
- package/src/js/context/providers/PointsGrid/IGridFormDataManager.ts +36 -0
- package/src/js/context/providers/PointsGrid/KGridFormDataManager.ts +46 -0
- package/src/js/context/providers/PointsGrid/PointsGridFormDataProvider.ts +371 -0
- package/src/js/context/providers/PointsGrid/QGridFormDataManager.ts +36 -0
- package/src/js/context/providers/PointsPath/ExplicitKPath2PIBAFormDataManager.ts +26 -0
- package/src/js/context/providers/PointsPath/ExplicitKPathFormDataManager.ts +24 -0
- package/src/js/context/providers/PointsPath/IPathFormDataManager.ts +22 -0
- package/src/js/context/providers/PointsPath/KPathFormDataManager.ts +22 -0
- package/src/js/context/providers/PointsPath/PointsPathFormDataProvider.ts +192 -0
- package/src/js/context/providers/PointsPath/QPathFormDataManager.ts +22 -0
- package/src/js/context/providers/base/ContextProvider.ts +150 -0
- package/src/js/context/providers/base/JSONSchemaDataProvider.ts +31 -0
- package/src/js/context/providers/base/JSONSchemaFormDataProvider.ts +38 -0
- package/src/js/context/providers/by_application/espresso/QENEBInputDataManager.ts +107 -0
- package/src/js/context/providers/by_application/espresso/QEPWXInputDataManager.ts +178 -0
- package/src/js/context/providers/by_application/nwchem/NWChemInputDataManager.ts +93 -0
- package/src/js/context/providers/by_application/vasp/VASPInputDataManager.ts +89 -0
- package/src/js/context/providers/by_application/vasp/VASPNEBInputDataManager.ts +92 -0
- package/src/js/context/providers/index.ts +155 -0
- package/src/js/context/providers/settings.ts +13 -0
- package/src/js/convergence/ConvergenceParameter.ts +37 -0
- package/src/js/convergence/NonUniformKGridConvergence.ts +38 -0
- package/src/js/convergence/UniformKGridConvergence.ts +26 -0
- package/src/js/convergence/factory.ts +18 -0
- package/src/js/{enums.js → enums.ts} +27 -22
- package/src/js/generated/AssertionUnitSchemaMixin.ts +34 -0
- package/src/js/generated/AssignmentUnitSchemaMixin.ts +40 -0
- package/src/js/generated/BaseUnitSchemaMixin.ts +64 -0
- package/src/js/generated/ConditionUnitSchemaMixin.ts +58 -0
- package/src/js/generated/ExecutionUnitInputSchemaMixin.ts +36 -0
- package/src/js/generated/ExecutionUnitSchemaMixin.ts +52 -0
- package/src/js/generated/IOUnitSchemaMixin.ts +40 -0
- package/src/js/generated/MapUnitSchemaMixin.ts +34 -0
- package/src/js/generated/ReduceUnitSchemaMixin.ts +34 -0
- package/src/js/generated/StatusSchemaMixin.ts +28 -0
- package/src/js/generated/SubworkflowSchemaMixin.ts +58 -0
- package/src/js/generated/SubworkflowUnitSchemaMixin.ts +22 -0
- package/src/js/generated/WorkflowSchemaMixin.ts +58 -0
- package/src/js/index.ts +44 -0
- package/src/js/units/AssertionUnit.ts +49 -0
- package/src/js/units/AssignmentUnit.ts +49 -0
- package/src/js/units/BaseUnit.ts +117 -0
- package/src/js/units/ConditionUnit.ts +52 -0
- package/src/js/units/ExecutionUnit.ts +274 -0
- package/src/js/units/ExecutionUnitInput.ts +71 -0
- package/src/js/units/IOUnit.ts +43 -0
- package/src/js/units/MapUnit.ts +59 -0
- package/src/js/units/ReduceUnit.ts +46 -0
- package/src/js/units/SubworkflowUnit.ts +44 -0
- package/src/js/units/factory.ts +131 -0
- package/src/js/units/index.ts +27 -0
- package/src/js/units/mixins/RuntimeItemsUILogicMixin.ts +81 -0
- package/src/js/utils/baseUnits.ts +11 -0
- package/src/js/utils/index.ts +3 -0
- package/src/js/utils/units.ts +23 -0
- package/src/js/utils/workflow.ts +69 -0
- package/src/js/workflows/{default.js → default.ts} +8 -1
- package/build_workflows.js +0 -65
- package/dist/js/context/context.js +0 -49
- package/dist/js/context/mixins/JobContextMixin.js +0 -39
- package/dist/js/context/mixins/MethodDataContextMixin.js +0 -48
- package/dist/js/context/mixins/WorkflowContextMixin.js +0 -28
- package/dist/js/context/providers/BoundaryConditionsFormDataProvider.js +0 -84
- package/dist/js/context/providers/CollinearMagnetizationContextProvider.js +0 -96
- package/dist/js/context/providers/HubbardContextProviderLegacy.js +0 -68
- package/dist/js/context/providers/HubbardJContextProvider.js +0 -67
- package/dist/js/context/providers/HubbardUContextProvider.js +0 -70
- package/dist/js/context/providers/HubbardVContextProvider.js +0 -92
- package/dist/js/context/providers/IonDynamicsContextProvider.js +0 -58
- package/dist/js/context/providers/MLSettingsContextProvider.js +0 -51
- package/dist/js/context/providers/MLTrainTestSplitContextProvider.js +0 -47
- package/dist/js/context/providers/NEBFormDataProvider.js +0 -42
- package/dist/js/context/providers/NonCollinearMagnetizationContextProvider.js +0 -187
- package/dist/js/context/providers/PlanewaveCutoffsContextProvider.js +0 -67
- package/dist/js/context/providers/PointsGridFormDataProvider.js +0 -263
- package/dist/js/context/providers/PointsPathFormDataProvider.js +0 -147
- package/dist/js/context/providers/by_application/ExecutableContextProvider.js +0 -25
- package/dist/js/context/providers/by_application/espresso/QENEBContextProvider.js +0 -61
- package/dist/js/context/providers/by_application/espresso/QEPWXContextProvider.js +0 -150
- package/dist/js/context/providers/by_application/nwchem/NWChemTotalEnergyContextProvider.js +0 -85
- package/dist/js/context/providers/by_application/vasp/VASPContextProvider.js +0 -65
- package/dist/js/context/providers/by_application/vasp/VASPNEBContextProvider.js +0 -57
- package/dist/js/context/providers.js +0 -199
- package/dist/js/patch.js +0 -19
- package/dist/js/subworkflows/convergence/non_uniform_kgrid.js +0 -31
- package/dist/js/subworkflows/convergence/parameter.js +0 -70
- package/dist/js/subworkflows/convergence/uniform_kgrid.js +0 -26
- package/dist/js/subworkflows/convergence.js +0 -189
- package/dist/js/subworkflows/create.js +0 -293
- package/dist/js/subworkflows/dynamic/espresso/getQpointIrrep.js +0 -34
- package/dist/js/subworkflows/dynamic/index.js +0 -19
- package/dist/js/subworkflows/dynamic/surfaceEnergy.js +0 -67
- package/dist/js/subworkflows/index.js +0 -19
- package/dist/js/units/assertion.js +0 -37
- package/dist/js/units/assignment.js +0 -42
- package/dist/js/units/base.js +0 -91
- package/dist/js/units/builders/AssertionUnitConfigBuilder.js +0 -34
- package/dist/js/units/builders/AssignmentUnitConfigBuilder.js +0 -41
- package/dist/js/units/builders/ExecutionUnitConfigBuilder.js +0 -67
- package/dist/js/units/builders/IOUnitConfigBuilder.js +0 -54
- package/dist/js/units/builders/UnitConfigBuilder.js +0 -85
- package/dist/js/units/builders/index.js +0 -18
- package/dist/js/units/condition.js +0 -52
- package/dist/js/units/execution.js +0 -225
- package/dist/js/units/io.js +0 -148
- package/dist/js/units/map.js +0 -38
- package/dist/js/units/processing.js +0 -41
- package/dist/js/units/reduce.js +0 -24
- package/dist/js/units/subworkflow.js +0 -23
- package/dist/js/workflows/create.js +0 -318
- package/dist/js/workflows/index.js +0 -113
- package/dist/js/workflows/relaxation.js +0 -38
- package/src/js/context/context.js +0 -47
- package/src/js/context/mixins/ApplicationContextMixin.js +0 -19
- package/src/js/context/mixins/JobContextMixin.js +0 -36
- package/src/js/context/mixins/MaterialContextMixin.js +0 -41
- package/src/js/context/mixins/MaterialsContextMixin.js +0 -18
- package/src/js/context/mixins/MaterialsSetContextMixin.js +0 -24
- package/src/js/context/mixins/MethodDataContextMixin.js +0 -48
- package/src/js/context/mixins/WorkflowContextMixin.js +0 -25
- package/src/js/context/providers/BoundaryConditionsFormDataProvider.js +0 -72
- package/src/js/context/providers/CollinearMagnetizationContextProvider.js +0 -105
- package/src/js/context/providers/HubbardContextProviderLegacy.js +0 -67
- package/src/js/context/providers/HubbardJContextProvider.js +0 -65
- package/src/js/context/providers/HubbardUContextProvider.js +0 -95
- package/src/js/context/providers/HubbardVContextProvider.js +0 -96
- package/src/js/context/providers/IonDynamicsContextProvider.js +0 -44
- package/src/js/context/providers/MLSettingsContextProvider.js +0 -45
- package/src/js/context/providers/MLTrainTestSplitContextProvider.js +0 -43
- package/src/js/context/providers/NEBFormDataProvider.js +0 -33
- package/src/js/context/providers/NonCollinearMagnetizationContextProvider.js +0 -179
- package/src/js/context/providers/PlanewaveCutoffsContextProvider.js +0 -65
- package/src/js/context/providers/PointsGridFormDataProvider.js +0 -271
- package/src/js/context/providers/PointsPathFormDataProvider.js +0 -163
- package/src/js/context/providers/by_application/ExecutableContextProvider.js +0 -17
- package/src/js/context/providers/by_application/espresso/QENEBContextProvider.js +0 -58
- package/src/js/context/providers/by_application/espresso/QEPWXContextProvider.js +0 -168
- package/src/js/context/providers/by_application/nwchem/NWChemTotalEnergyContextProvider.js +0 -89
- package/src/js/context/providers/by_application/vasp/VASPContextProvider.js +0 -58
- package/src/js/context/providers/by_application/vasp/VASPNEBContextProvider.js +0 -48
- package/src/js/context/providers/settings.js +0 -38
- package/src/js/context/providers.js +0 -140
- package/src/js/index.js +0 -57
- package/src/js/patch.js +0 -12
- package/src/js/subworkflows/convergence/enums.js +0 -12
- package/src/js/subworkflows/convergence/factory.js +0 -15
- package/src/js/subworkflows/convergence/non_uniform_kgrid.js +0 -28
- package/src/js/subworkflows/convergence/parameter.js +0 -58
- package/src/js/subworkflows/convergence/uniform_kgrid.js +0 -22
- package/src/js/subworkflows/convergence.js +0 -196
- package/src/js/subworkflows/create.js +0 -220
- package/src/js/subworkflows/dynamic/espresso/getQpointIrrep.js +0 -35
- package/src/js/subworkflows/dynamic/index.js +0 -8
- package/src/js/subworkflows/dynamic/surfaceEnergy.js +0 -124
- package/src/js/subworkflows/index.js +0 -2
- package/src/js/subworkflows/subworkflow.js +0 -345
- package/src/js/units/assertion.js +0 -29
- package/src/js/units/assignment.js +0 -34
- package/src/js/units/base.js +0 -97
- package/src/js/units/builders/AssertionUnitConfigBuilder.js +0 -28
- package/src/js/units/builders/AssignmentUnitConfigBuilder.js +0 -36
- package/src/js/units/builders/ExecutionUnitConfigBuilder.js +0 -59
- package/src/js/units/builders/IOUnitConfigBuilder.js +0 -53
- package/src/js/units/builders/UnitConfigBuilder.js +0 -92
- package/src/js/units/builders/index.js +0 -15
- package/src/js/units/condition.js +0 -47
- package/src/js/units/execution.js +0 -267
- package/src/js/units/factory.js +0 -53
- package/src/js/units/index.js +0 -25
- package/src/js/units/io.js +0 -163
- package/src/js/units/map.js +0 -33
- package/src/js/units/processing.js +0 -39
- package/src/js/units/reduce.js +0 -17
- package/src/js/units/subworkflow.js +0 -15
- package/src/js/utils.js +0 -73
- package/src/js/workflows/create.js +0 -227
- package/src/js/workflows/index.js +0 -98
- package/src/js/workflows/relaxation.js +0 -42
- package/src/js/workflows/workflow.js +0 -388
|
@@ -0,0 +1,67 @@
|
|
|
1
|
+
"use strict";
|
|
2
|
+
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
|
+
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
|
+
};
|
|
5
|
+
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
+
exports.getUsedApplications = getUsedApplications;
|
|
7
|
+
exports.getSystemName = getSystemName;
|
|
8
|
+
exports.getUsedModels = getUsedModels;
|
|
9
|
+
exports.getDefaultDescription = getDefaultDescription;
|
|
10
|
+
exports.getProperties = getProperties;
|
|
11
|
+
exports.getHumanReadableProperties = getHumanReadableProperties;
|
|
12
|
+
exports.getHumanReadableUsedModels = getHumanReadableUsedModels;
|
|
13
|
+
exports.resetUnitsStatuses = resetUnitsStatuses;
|
|
14
|
+
const tree_1 = require("@mat3ra/mode/dist/js/tree");
|
|
15
|
+
const underscore_string_1 = __importDefault(require("underscore.string"));
|
|
16
|
+
const baseUnits_1 = require("./baseUnits");
|
|
17
|
+
function getUsedApplications(workflow) {
|
|
18
|
+
const swApplications = workflow.subworkflows.map((sw) => sw.application);
|
|
19
|
+
const nestedWorkflows = workflow.workflows;
|
|
20
|
+
const wfApplications = nestedWorkflows.map(getUsedApplications).flat();
|
|
21
|
+
return [...swApplications, ...wfApplications].reduce((acc, app) => {
|
|
22
|
+
if (!acc.some((a) => a.name === app.name)) {
|
|
23
|
+
acc.push(app);
|
|
24
|
+
}
|
|
25
|
+
return acc;
|
|
26
|
+
}, []);
|
|
27
|
+
}
|
|
28
|
+
function getSystemName(workflow) {
|
|
29
|
+
const applicationNames = getUsedApplications(workflow).map((a) => a.name);
|
|
30
|
+
return underscore_string_1.default.slugify(`${applicationNames.join(":")}-${workflow.name}`);
|
|
31
|
+
}
|
|
32
|
+
function getUsedModels(workflow) {
|
|
33
|
+
return workflow.subworkflows.map((sw) => sw.model.type);
|
|
34
|
+
}
|
|
35
|
+
function getDefaultDescription(workflow) {
|
|
36
|
+
const applicationNames = getUsedApplications(workflow).map((a) => a.name);
|
|
37
|
+
return `${getUsedModels(workflow)
|
|
38
|
+
.join(", ")
|
|
39
|
+
.toUpperCase()} workflow using ${applicationNames.join(", ")}.`;
|
|
40
|
+
}
|
|
41
|
+
function getProperties(workflow) {
|
|
42
|
+
return [...new Set(workflow.subworkflows.map((sw) => sw.properties || []).flat())];
|
|
43
|
+
}
|
|
44
|
+
function getHumanReadableProperties(workflow) {
|
|
45
|
+
return getProperties(workflow).map((name) => name
|
|
46
|
+
.split("_")
|
|
47
|
+
.map((w) => w.charAt(0).toUpperCase() + w.slice(1).toLowerCase())
|
|
48
|
+
.join(" "));
|
|
49
|
+
}
|
|
50
|
+
function getHumanReadableUsedModels(workflow) {
|
|
51
|
+
return getUsedModels(workflow)
|
|
52
|
+
.filter((m) => m !== "unknown")
|
|
53
|
+
.map((m) => tree_1.MODEL_NAMES[m]);
|
|
54
|
+
}
|
|
55
|
+
function resetUnitsStatuses(workflow) {
|
|
56
|
+
var _a;
|
|
57
|
+
return {
|
|
58
|
+
...workflow,
|
|
59
|
+
subworkflows: workflow.subworkflows.map((subworkflow) => {
|
|
60
|
+
return {
|
|
61
|
+
...subworkflow,
|
|
62
|
+
units: subworkflow.units.map(baseUnits_1.resetStatus),
|
|
63
|
+
};
|
|
64
|
+
}),
|
|
65
|
+
workflows: (_a = workflow.workflows) === null || _a === void 0 ? void 0 : _a.map((wf) => resetUnitsStatuses(wf)),
|
|
66
|
+
};
|
|
67
|
+
}
|
package/dist/js/utils.js
CHANGED
|
@@ -22,7 +22,6 @@ function setUnitsHead(units) {
|
|
|
22
22
|
return units;
|
|
23
23
|
}
|
|
24
24
|
|
|
25
|
-
// TODO: fix setNextLinks on unit removal and convergence logic.
|
|
26
25
|
/**
|
|
27
26
|
* @summary Re-establishes the linked `next => flowchartId` logic in an array of units
|
|
28
27
|
* @params units {Unit[]}
|
|
@@ -31,12 +30,8 @@ function setUnitsHead(units) {
|
|
|
31
30
|
function setNextLinks(units) {
|
|
32
31
|
const flowchartIds = units.map(u => u.flowchartId);
|
|
33
32
|
for (let i = 0; i < units.length - 1; i++) {
|
|
34
|
-
if (!units[i].next) {
|
|
35
|
-
// newly added units don't have next set yet =>
|
|
36
|
-
units[i].next = units[i + 1].flowchartId;
|
|
37
|
-
if (i > 0) units[i - 1].next = units[i].flowchartId;
|
|
38
|
-
} else if (!flowchartIds.includes(units[i].next)) {
|
|
39
|
-
// newly removed units may create broken next links => fix it
|
|
33
|
+
if (!units[i].next || !flowchartIds.includes(units[i].next)) {
|
|
34
|
+
// newly added units don't have next set yet, or removed units created broken links => fix it
|
|
40
35
|
units[i].next = units[i + 1].flowchartId;
|
|
41
36
|
}
|
|
42
37
|
}
|
|
@@ -1,41 +1,45 @@
|
|
|
1
1
|
"use strict";
|
|
2
|
-
|
|
3
|
-
|
|
4
|
-
|
|
5
|
-
});
|
|
6
|
-
exports.default = void 0;
|
|
7
|
-
var _default = exports.default = {
|
|
8
|
-
name: "New Workflow",
|
|
9
|
-
properties: [],
|
|
10
|
-
subworkflows: [{
|
|
11
|
-
_id: "c6e9dbbee8929de01f4e76ee",
|
|
12
|
-
application: {
|
|
13
|
-
name: "espresso",
|
|
14
|
-
summary: "Quantum Espresso",
|
|
15
|
-
version: "6.3"
|
|
16
|
-
},
|
|
17
|
-
model: {
|
|
18
|
-
method: {
|
|
19
|
-
subtype: "us",
|
|
20
|
-
type: "pseudopotential"
|
|
21
|
-
},
|
|
22
|
-
subtype: "gga",
|
|
23
|
-
type: "dft"
|
|
24
|
-
},
|
|
25
|
-
name: "New Subworkflow",
|
|
2
|
+
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
|
+
const defaultWorkflowConfig = {
|
|
4
|
+
name: "New Workflow",
|
|
26
5
|
properties: [],
|
|
27
|
-
|
|
28
|
-
|
|
29
|
-
|
|
30
|
-
|
|
31
|
-
|
|
32
|
-
|
|
33
|
-
|
|
34
|
-
|
|
35
|
-
|
|
36
|
-
|
|
37
|
-
|
|
38
|
-
|
|
39
|
-
|
|
40
|
-
|
|
41
|
-
}
|
|
6
|
+
subworkflows: [
|
|
7
|
+
{
|
|
8
|
+
_id: "c6e9dbbee8929de01f4e76ee",
|
|
9
|
+
application: {
|
|
10
|
+
name: "espresso",
|
|
11
|
+
shortName: "espresso",
|
|
12
|
+
summary: "Quantum Espresso",
|
|
13
|
+
build: "6.3",
|
|
14
|
+
version: "6.3",
|
|
15
|
+
},
|
|
16
|
+
model: {
|
|
17
|
+
method: {
|
|
18
|
+
subtype: "us",
|
|
19
|
+
type: "pseudopotential",
|
|
20
|
+
},
|
|
21
|
+
subtype: "gga",
|
|
22
|
+
type: "dft",
|
|
23
|
+
functional: "other",
|
|
24
|
+
},
|
|
25
|
+
name: "New Subworkflow",
|
|
26
|
+
properties: [],
|
|
27
|
+
units: [],
|
|
28
|
+
},
|
|
29
|
+
],
|
|
30
|
+
workflows: [],
|
|
31
|
+
units: [
|
|
32
|
+
{
|
|
33
|
+
_id: "c6e9dbbee8929de01f4e76ee",
|
|
34
|
+
flowchartId: "da2c090ede4dc2fa6e66647f",
|
|
35
|
+
head: true,
|
|
36
|
+
monitors: [],
|
|
37
|
+
postProcessors: [],
|
|
38
|
+
preProcessors: [],
|
|
39
|
+
results: [],
|
|
40
|
+
type: "subworkflow",
|
|
41
|
+
name: "New Subworkflow",
|
|
42
|
+
},
|
|
43
|
+
],
|
|
44
|
+
};
|
|
45
|
+
exports.default = defaultWorkflowConfig;
|