@mat3ra/esse 2025.8.20-0 → 2025.10.8-0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/js/example/element.json +2 -1
- package/dist/js/example/properties_directory/elemental/ionization_potential.json +2 -1
- package/dist/js/example/properties_directory/workflow/convergence/electronic.json +1 -0
- package/dist/js/example/properties_directory/workflow/convergence/ionic.json +1 -0
- package/dist/js/example/property/{base.json → holder.json} +10 -8
- package/dist/js/example/workflow/unit/io/object_storage.json +2 -1
- package/dist/js/schema/core/abstract/2d_data.json +15 -5
- package/dist/js/schema/core/abstract/2d_plot.json +15 -10
- package/dist/js/schema/core/primitive/1d_data_series.json +1 -4
- package/dist/js/schema/core/{reusable/axis_enum.json → primitive/axis_3d_names_enum.json} +1 -1
- package/dist/js/schema/core/reference/exabyte.json +4 -4
- package/dist/js/schema/core/reusable/{coordinate_conditions.json → coordinate_conditions/index.json} +1 -1
- package/dist/js/schema/core/reusable/energy.json +1 -1
- package/dist/js/schema/core/{abstract → reusable}/kpoint.json +1 -1
- package/dist/js/schema/definitions/{materials.json → material.json} +1 -1
- package/dist/js/schema/element.json +5 -2
- package/dist/js/schema/job.json +168 -187
- package/dist/js/schema/methods_directory/physical/psp/file.json +3 -1
- package/dist/js/schema/methods_directory/physical/psp/file_data_item.json +3 -1
- package/dist/js/schema/methods_directory/physical/psp.json +3 -1
- package/dist/js/schema/properties_directory/elemental/atomic_radius.json +1 -0
- package/dist/js/schema/properties_directory/elemental/electronegativity.json +1 -0
- package/dist/js/schema/properties_directory/elemental/ionization_potential.json +3 -2
- package/dist/js/schema/properties_directory/jupyter_notebook_endpoint.json +28 -0
- package/dist/js/schema/properties_directory/non_scalar/average_potential_profile.json +17 -11
- package/dist/js/schema/properties_directory/non_scalar/band_gaps.json +3 -2
- package/dist/js/schema/properties_directory/non_scalar/band_structure.json +18 -11
- package/dist/js/schema/properties_directory/non_scalar/charge_density_profile.json +17 -11
- package/dist/js/schema/properties_directory/non_scalar/density_of_states.json +18 -8
- package/dist/js/schema/properties_directory/non_scalar/dielectric_tensor.json +3 -2
- package/dist/js/schema/properties_directory/non_scalar/file_content.json +2 -1
- package/dist/js/schema/properties_directory/non_scalar/final_structure.json +25 -0
- package/dist/js/schema/properties_directory/non_scalar/hubbard_u.json +4 -2
- package/dist/js/schema/properties_directory/non_scalar/hubbard_v.json +5 -4
- package/dist/js/schema/properties_directory/non_scalar/hubbard_v_nn.json +4 -3
- package/dist/js/schema/properties_directory/non_scalar/is_relaxed.json +25 -0
- package/dist/js/schema/properties_directory/non_scalar/phonon_dispersions.json +17 -11
- package/dist/js/schema/properties_directory/non_scalar/phonon_dos.json +17 -11
- package/dist/js/schema/properties_directory/non_scalar/potential_profile.json +17 -11
- package/dist/js/schema/properties_directory/non_scalar/reaction_energy_profile.json +17 -11
- package/dist/js/schema/properties_directory/non_scalar/stress_tensor.json +6 -1
- package/dist/js/schema/properties_directory/non_scalar/total_energy_contributions.json +26 -4
- package/dist/js/schema/properties_directory/non_scalar/vibrational_spectrum.json +17 -11
- package/dist/js/schema/properties_directory/non_scalar/workflow.json +5503 -0
- package/dist/js/schema/properties_directory/reusable/hubbard_parameters.json +70 -0
- package/dist/js/schema/properties_directory/scalar/electron_affinity.json +2 -2
- package/dist/js/schema/properties_directory/scalar/fermi_energy.json +2 -2
- package/dist/js/schema/properties_directory/scalar/formation_energy.json +2 -2
- package/dist/js/schema/properties_directory/scalar/ionization_potential.json +2 -2
- package/dist/js/schema/properties_directory/scalar/pressure.json +3 -1
- package/dist/js/schema/properties_directory/scalar/reaction_energy_barrier.json +2 -2
- package/dist/js/schema/properties_directory/scalar/surface_energy.json +2 -2
- package/dist/js/schema/properties_directory/scalar/total_energy.json +2 -2
- package/dist/js/schema/properties_directory/scalar/total_force.json +3 -1
- package/dist/js/schema/properties_directory/scalar/valence_band_offset.json +2 -2
- package/dist/js/schema/properties_directory/scalar/zero_point_energy.json +2 -2
- package/dist/js/schema/properties_directory/structural/atomic_forces.json +6 -1
- package/dist/js/schema/properties_directory/structural/basis/atomic_constraints_property.json +4 -0
- package/dist/js/schema/properties_directory/structural/basis/boundary_conditions.json +33 -0
- package/dist/js/schema/properties_directory/structural/lattice/{lattice_vectors.json → units.json} +1 -1
- package/dist/js/schema/properties_directory/structural/magnetic_moments.json +6 -1
- package/dist/js/schema/properties_directory/structural/molecular_pattern.json +12 -3
- package/dist/js/schema/properties_directory/structural/patterns/functional_group.json +3 -0
- package/dist/js/schema/properties_directory/structural/patterns/ring.json +3 -0
- package/dist/js/schema/properties_directory/structural/patterns/special_bond.json +3 -0
- package/dist/js/schema/properties_directory/workflow/convergence/electronic.json +4 -2
- package/dist/js/schema/properties_directory/workflow/convergence/ionic.json +7 -2
- package/dist/js/schema/property/holder.json +7886 -0
- package/dist/js/schema/property/meta_holder.json +244 -0
- package/dist/js/schema/property/proto_holder.json +143 -0
- package/dist/js/schema/property/source.json +9 -6
- package/dist/js/schema/workflow/base_flow.json +162 -177
- package/dist/js/schema/workflow/subworkflow/unit.json +3 -5
- package/dist/js/schema/workflow/subworkflow.json +165 -182
- package/dist/js/schema/workflow/unit/io/db.json +1 -2
- package/dist/js/schema/workflow/unit/io/object_storage.json +1 -2
- package/dist/js/schema/workflow/unit/io.json +3 -5
- package/dist/js/schema/workflow/unit.json +3 -5
- package/dist/js/schema/workflow.json +168 -187
- package/dist/js/schemas.json +1 -1
- package/dist/js/types.d.ts +6756 -1388
- package/example/properties_directory/elemental/ionization_potential.json +2 -1
- package/example/properties_directory/non-scalar/hubbard_v.json +3 -3
- package/example/properties_directory/non-scalar/hubbard_v_nn.json +3 -3
- package/example/properties_directory/workflow/convergence/electronic.json +1 -0
- package/example/properties_directory/workflow/convergence/ionic.json +1 -0
- package/example/property/{base.json → holder.json} +11 -2
- package/example/workflow/unit/io/object_storage.json +2 -1
- package/package.json +3 -3
- package/schema/core/abstract/2d_data.json +14 -1
- package/schema/core/abstract/2d_plot.json +0 -5
- package/schema/core/primitive/1d_data_series.json +1 -4
- package/schema/core/primitive/axis_3d_names_enum.json +1 -1
- package/schema/core/reference/exabyte.json +5 -5
- package/schema/core/reusable/coordinate_conditions/index.json +2 -2
- package/schema/core/reusable/energy.json +1 -1
- package/schema/core/reusable/kpoint.json +1 -1
- package/schema/definitions/material.json +1 -1
- package/schema/methods_directory/physical/psp/file_data_item.json +3 -1
- package/schema/properties_directory/elemental/atomic_radius.json +4 -1
- package/schema/properties_directory/elemental/electronegativity.json +4 -1
- package/schema/properties_directory/elemental/ionization_potential.json +6 -3
- package/schema/properties_directory/jupyter_notebook_endpoint.json +28 -0
- package/schema/properties_directory/non-scalar/average_potential_profile.json +5 -2
- package/schema/properties_directory/non-scalar/band_gaps.json +4 -2
- package/schema/properties_directory/non-scalar/band_structure.json +8 -2
- package/schema/properties_directory/non-scalar/charge_density_profile.json +5 -2
- package/schema/properties_directory/non-scalar/density_of_states.json +6 -2
- package/schema/properties_directory/non-scalar/dielectric_tensor.json +4 -2
- package/schema/properties_directory/non-scalar/file_content.json +2 -1
- package/schema/properties_directory/non-scalar/final_structure.json +25 -0
- package/schema/properties_directory/non-scalar/hubbard_u.json +5 -2
- package/schema/properties_directory/non-scalar/hubbard_v.json +7 -26
- package/schema/properties_directory/non-scalar/hubbard_v_nn.json +12 -2
- package/schema/properties_directory/non-scalar/is_relaxed.json +25 -0
- package/schema/properties_directory/non-scalar/phonon_dispersions.json +5 -2
- package/schema/properties_directory/non-scalar/phonon_dos.json +5 -2
- package/schema/properties_directory/non-scalar/potential_profile.json +5 -2
- package/schema/properties_directory/non-scalar/reaction_energy_profile.json +5 -2
- package/schema/properties_directory/non-scalar/stress_tensor.json +8 -2
- package/schema/properties_directory/non-scalar/total_energy_contributions.json +25 -5
- package/schema/properties_directory/non-scalar/vibrational_spectrum.json +5 -2
- package/schema/properties_directory/non-scalar/workflow.json +21 -0
- package/schema/properties_directory/reusable/hubbard_parameters.json +36 -0
- package/schema/properties_directory/scalar/electron_affinity.json +5 -2
- package/schema/properties_directory/scalar/fermi_energy.json +5 -2
- package/schema/properties_directory/scalar/formation_energy.json +5 -2
- package/schema/properties_directory/scalar/ionization_potential.json +5 -2
- package/schema/properties_directory/scalar/pressure.json +6 -2
- package/schema/properties_directory/scalar/reaction_energy_barrier.json +5 -2
- package/schema/properties_directory/scalar/surface_energy.json +5 -2
- package/schema/properties_directory/scalar/total_energy.json +6 -2
- package/schema/properties_directory/scalar/total_force.json +6 -2
- package/schema/properties_directory/scalar/valence_band_offset.json +5 -2
- package/schema/properties_directory/scalar/zero_point_energy.json +5 -2
- package/schema/properties_directory/structural/atomic_forces.json +7 -2
- package/schema/properties_directory/structural/basis/atomic_constraints_property.json +5 -1
- package/schema/properties_directory/structural/basis/boundary_conditions.json +25 -0
- package/schema/properties_directory/structural/lattice/units.json +1 -1
- package/schema/properties_directory/structural/magnetic_moments.json +7 -2
- package/schema/properties_directory/structural/patterns/functional_group.json +4 -1
- package/schema/properties_directory/structural/patterns/ring.json +4 -1
- package/schema/properties_directory/structural/patterns/special_bond.json +4 -1
- package/schema/properties_directory/workflow/convergence/electronic.json +4 -2
- package/schema/properties_directory/workflow/convergence/ionic.json +8 -3
- package/schema/property/holder.json +180 -0
- package/schema/property/meta_holder.json +42 -0
- package/schema/property/proto_holder.json +51 -0
- package/schema/property/source.json +5 -2
- package/schema/workflow/base_flow.json +2 -16
- package/schema/workflow/unit/io/db.json +1 -2
- package/schema/workflow/unit/io/object_storage.json +1 -2
- package/schema/workflow/unit/io.json +1 -1
- package/dist/js/schema/property/base.json +0 -346
- package/dist/js/schema/property/meta.json +0 -346
- package/dist/js/schema/property/raw.json +0 -346
- package/schema/property/base.json +0 -58
- package/schema/property/meta.json +0 -11
- package/schema/property/raw.json +0 -58
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{
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"$id": "properties-directory/reusable/hubbard-parameters",
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "Hubbard parameters reusable schema",
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"description": "Common properties for hubbard parameter schemas",
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"description": "Atomic properties per orbital pair with numeric value e.g., Hubbard V parameters.",
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"id": {
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"title": "Surface energy property schema",
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"type": "object",
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"required": [
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"units": {
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"oneOf": [
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"kJ/mol",
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@@ -1,7 +1,7 @@
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{
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"$id": "properties-directory/scalar/total-energy",
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "
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"title": "Total energy property schema",
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"type": "object",
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@@ -1,9 +1,11 @@
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{
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"$id": "properties-directory/scalar/total-force",
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "
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"title": "Total forces property schema",
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"type": "object",
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"name",
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"units",
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"value"
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"properties": {
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@@ -1,7 +1,7 @@
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{
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"$id": "properties-directory/scalar/valence-band-offset",
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "
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"title": "Valence band offset property schema",
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"type": "object",
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"units": {
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@@ -1,7 +1,7 @@
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{
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"$id": "properties-directory/scalar/zero-point-energy",
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "
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"title": "Zero point energy property schema",
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@@ -1,9 +1,14 @@
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{
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"$id": "properties-directory/structural/atomic-forces",
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"$schema": "http://json-schema.org/draft-07/schema#",
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-
"title": "
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"title": "Atomic forces property schema",
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"description": "coordinates of atoms by ids, vector, unitless",
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"type": "object",
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"required": [
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"name",
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"units",
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"properties": {
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"name": {
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"enum": [
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@@ -0,0 +1,33 @@
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{
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"$id": "properties-directory/structural/basis/boundary-conditions",
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "boundary conditions property schema",
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"description": "boundary conditions property schema (as stored in a database)",
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"type": "object",
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"required": [
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"name",
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"type",
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"offset"
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],
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"properties": {
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"name": {
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"enum": [
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"boundary_conditions"
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]
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},
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"type": {
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"type": "string",
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"enum": [
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"pbc",
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"bc1",
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"bc2",
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"bc3"
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],
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|
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"default": "pbc",
|
|
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|
+
"description": "If assume_isolated = 'esm', determines the boundary conditions used for either side of the slab."
|
|
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+
},
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"offset": {
|
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"type": "number"
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}
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}
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}
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|
@@ -1,9 +1,14 @@
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{
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"$id": "properties-directory/structural/magnetic-moments",
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"$schema": "http://json-schema.org/draft-07/schema#",
|
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|
-
"title": "
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"title": "Magnetic moments property schema",
|
|
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|
"description": "magnetization on each ion",
|
|
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"type": "object",
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"required": [
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],
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"properties": {
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"enum": [
|
|
@@ -44,7 +44,10 @@
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|
"description": "SMARTS string for classification of FG; https://en.wikipedia.org/wiki/SMILES_arbitrary_target_specification",
|
|
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|
"type": "string"
|
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}
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|
-
}
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},
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"required": [
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"name"
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]
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|
},
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{
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"$schema": "http://json-schema.org/draft-07/schema#",
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@@ -84,7 +87,10 @@
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"isAromatic": {
|
|
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|
"type": "boolean"
|
|
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|
}
|
|
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|
-
}
|
|
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|
+
},
|
|
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|
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"required": [
|
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]
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|
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},
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|
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|
@@ -122,7 +128,10 @@
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}
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}
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}
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|
-
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},
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"required": [
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]
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|
}
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|
]
|
|
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|
}
|
|
@@ -4,6 +4,9 @@
|
|
|
4
4
|
"title": "special bond pattern schema",
|
|
5
5
|
"type": "object",
|
|
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6
|
"description": "Any bonding interaction that cannot be described by simple 2-atom picture, e.g. 3-center-2-electron bond in diborane",
|
|
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|
+
"required": [
|
|
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|
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"name"
|
|
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|
+
],
|
|
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|
"properties": {
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"name": {
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|
|
@@ -1,10 +1,12 @@
|
|
|
1
1
|
{
|
|
2
2
|
"$id": "properties-directory/workflow/convergence/electronic",
|
|
3
3
|
"$schema": "http://json-schema.org/draft-07/schema#",
|
|
4
|
-
"title": "electronic
|
|
4
|
+
"title": "Convergence electronic property schema",
|
|
5
5
|
"type": "object",
|
|
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6
|
"required": [
|
|
7
|
-
"data"
|
|
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|
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"data",
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|
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"name",
|
|
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|
+
"units"
|
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|
],
|
|
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|
"properties": {
|
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|
"name": {
|
|
@@ -1,10 +1,12 @@
|
|
|
1
1
|
{
|
|
2
2
|
"$id": "properties-directory/workflow/convergence/ionic",
|
|
3
3
|
"$schema": "http://json-schema.org/draft-07/schema#",
|
|
4
|
-
"title": "ionic
|
|
4
|
+
"title": "Convergence ionic property schema",
|
|
5
5
|
"type": "object",
|
|
6
6
|
"required": [
|
|
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|
-
"data"
|
|
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|
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"data",
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|
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"name",
|
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|
+
"units"
|
|
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|
],
|
|
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|
"properties": {
|
|
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|
"name": {
|
|
@@ -26,6 +28,9 @@
|
|
|
26
28
|
"description": "energetic and structural information",
|
|
27
29
|
"items": {
|
|
28
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|
"type": "object",
|
|
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|
+
"required": [
|
|
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|
+
"energy"
|
|
33
|
+
],
|
|
29
34
|
"properties": {
|
|
30
35
|
"energy": {
|
|
31
36
|
"description": "converged electronic energy for this structure (last in `electronic`)",
|