@mat3ra/esse 2025.8.14-0 → 2025.10.8-0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (199) hide show
  1. package/dist/js/example/element.json +2 -1
  2. package/dist/js/example/properties_directory/elemental/ionization_potential.json +2 -1
  3. package/dist/js/example/properties_directory/workflow/convergence/electronic.json +1 -0
  4. package/dist/js/example/properties_directory/workflow/convergence/ionic.json +1 -0
  5. package/dist/js/example/property/{base.json → holder.json} +10 -8
  6. package/dist/js/example/workflow/unit/io/object_storage.json +2 -1
  7. package/dist/js/schema/core/abstract/2d_data.json +15 -5
  8. package/dist/js/schema/core/abstract/2d_plot.json +15 -10
  9. package/dist/js/schema/core/primitive/1d_data_series.json +1 -4
  10. package/dist/js/schema/core/{reusable/axis_enum.json → primitive/axis_3d_names_enum.json} +1 -1
  11. package/dist/js/schema/core/reference/exabyte.json +4 -4
  12. package/dist/js/schema/core/reusable/{coordinate_conditions.json → coordinate_conditions/index.json} +1 -1
  13. package/dist/js/schema/core/reusable/energy.json +1 -1
  14. package/dist/js/schema/core/{abstract → reusable}/kpoint.json +1 -1
  15. package/dist/js/schema/definitions/{materials.json → material.json} +1 -1
  16. package/dist/js/schema/element.json +5 -2
  17. package/dist/js/schema/job.json +168 -187
  18. package/dist/js/schema/methods_directory/physical/psp/file.json +3 -1
  19. package/dist/js/schema/methods_directory/physical/psp/file_data_item.json +3 -1
  20. package/dist/js/schema/methods_directory/physical/psp.json +3 -1
  21. package/dist/js/schema/properties_directory/elemental/atomic_radius.json +1 -0
  22. package/dist/js/schema/properties_directory/elemental/electronegativity.json +1 -0
  23. package/dist/js/schema/properties_directory/elemental/ionization_potential.json +3 -2
  24. package/dist/js/schema/properties_directory/jupyter_notebook_endpoint.json +28 -0
  25. package/dist/js/schema/properties_directory/non_scalar/average_potential_profile.json +17 -11
  26. package/dist/js/schema/properties_directory/non_scalar/band_gaps.json +3 -2
  27. package/dist/js/schema/properties_directory/non_scalar/band_structure.json +18 -11
  28. package/dist/js/schema/properties_directory/non_scalar/charge_density_profile.json +17 -11
  29. package/dist/js/schema/properties_directory/non_scalar/density_of_states.json +18 -8
  30. package/dist/js/schema/properties_directory/non_scalar/dielectric_tensor.json +3 -2
  31. package/dist/js/schema/properties_directory/non_scalar/file_content.json +2 -1
  32. package/dist/js/schema/properties_directory/non_scalar/final_structure.json +25 -0
  33. package/dist/js/schema/properties_directory/non_scalar/hubbard_u.json +4 -2
  34. package/dist/js/schema/properties_directory/non_scalar/hubbard_v.json +5 -4
  35. package/dist/js/schema/properties_directory/non_scalar/hubbard_v_nn.json +4 -3
  36. package/dist/js/schema/properties_directory/non_scalar/is_relaxed.json +25 -0
  37. package/dist/js/schema/properties_directory/non_scalar/phonon_dispersions.json +17 -11
  38. package/dist/js/schema/properties_directory/non_scalar/phonon_dos.json +17 -11
  39. package/dist/js/schema/properties_directory/non_scalar/potential_profile.json +17 -11
  40. package/dist/js/schema/properties_directory/non_scalar/reaction_energy_profile.json +17 -11
  41. package/dist/js/schema/properties_directory/non_scalar/stress_tensor.json +6 -1
  42. package/dist/js/schema/properties_directory/non_scalar/total_energy_contributions.json +26 -4
  43. package/dist/js/schema/properties_directory/non_scalar/vibrational_spectrum.json +17 -11
  44. package/dist/js/schema/properties_directory/non_scalar/workflow.json +5503 -0
  45. package/dist/js/schema/properties_directory/reusable/hubbard_parameters.json +70 -0
  46. package/dist/js/schema/properties_directory/scalar/electron_affinity.json +2 -2
  47. package/dist/js/schema/properties_directory/scalar/fermi_energy.json +2 -2
  48. package/dist/js/schema/properties_directory/scalar/formation_energy.json +2 -2
  49. package/dist/js/schema/properties_directory/scalar/ionization_potential.json +2 -2
  50. package/dist/js/schema/properties_directory/scalar/pressure.json +3 -1
  51. package/dist/js/schema/properties_directory/scalar/reaction_energy_barrier.json +2 -2
  52. package/dist/js/schema/properties_directory/scalar/surface_energy.json +2 -2
  53. package/dist/js/schema/properties_directory/scalar/total_energy.json +2 -2
  54. package/dist/js/schema/properties_directory/scalar/total_force.json +3 -1
  55. package/dist/js/schema/properties_directory/scalar/valence_band_offset.json +2 -2
  56. package/dist/js/schema/properties_directory/scalar/zero_point_energy.json +2 -2
  57. package/dist/js/schema/properties_directory/structural/atomic_forces.json +6 -1
  58. package/dist/js/schema/properties_directory/structural/basis/atomic_constraints_property.json +4 -0
  59. package/dist/js/schema/properties_directory/structural/basis/boundary_conditions.json +33 -0
  60. package/dist/js/schema/properties_directory/structural/lattice/{lattice_vectors.json → units.json} +1 -1
  61. package/dist/js/schema/properties_directory/structural/magnetic_moments.json +6 -1
  62. package/dist/js/schema/properties_directory/structural/molecular_pattern.json +12 -3
  63. package/dist/js/schema/properties_directory/structural/patterns/functional_group.json +3 -0
  64. package/dist/js/schema/properties_directory/structural/patterns/ring.json +3 -0
  65. package/dist/js/schema/properties_directory/structural/patterns/special_bond.json +3 -0
  66. package/dist/js/schema/properties_directory/workflow/convergence/electronic.json +4 -2
  67. package/dist/js/schema/properties_directory/workflow/convergence/ionic.json +7 -2
  68. package/dist/js/schema/property/holder.json +7886 -0
  69. package/dist/js/schema/property/meta_holder.json +244 -0
  70. package/dist/js/schema/property/proto_holder.json +143 -0
  71. package/dist/js/schema/property/source.json +9 -6
  72. package/dist/js/schema/workflow/base_flow.json +162 -177
  73. package/dist/js/schema/workflow/subworkflow/unit.json +3 -5
  74. package/dist/js/schema/workflow/subworkflow.json +165 -182
  75. package/dist/js/schema/workflow/unit/io/db.json +1 -2
  76. package/dist/js/schema/workflow/unit/io/object_storage.json +1 -2
  77. package/dist/js/schema/workflow/unit/io.json +3 -5
  78. package/dist/js/schema/workflow/unit.json +3 -5
  79. package/dist/js/schema/workflow.json +168 -187
  80. package/dist/js/schemas.json +1 -1
  81. package/dist/js/types.d.ts +6346 -4266
  82. package/example/properties_directory/elemental/ionization_potential.json +2 -1
  83. package/example/properties_directory/non-scalar/hubbard_v.json +3 -3
  84. package/example/properties_directory/non-scalar/hubbard_v_nn.json +3 -3
  85. package/example/properties_directory/workflow/convergence/electronic.json +1 -0
  86. package/example/properties_directory/workflow/convergence/ionic.json +1 -0
  87. package/example/property/{base.json → holder.json} +11 -2
  88. package/example/workflow/unit/io/object_storage.json +2 -1
  89. package/package.json +3 -3
  90. package/schema/core/abstract/2d_data.json +14 -1
  91. package/schema/core/abstract/2d_plot.json +0 -5
  92. package/schema/core/primitive/1d_data_series.json +1 -4
  93. package/schema/core/primitive/axis_3d_names_enum.json +1 -1
  94. package/schema/core/reference/exabyte.json +5 -5
  95. package/schema/core/reusable/coordinate_conditions/index.json +2 -2
  96. package/schema/core/reusable/energy.json +1 -1
  97. package/schema/core/reusable/kpoint.json +1 -1
  98. package/schema/definitions/material.json +1 -1
  99. package/schema/methods_directory/physical/psp/file_data_item.json +3 -1
  100. package/schema/properties_directory/elemental/atomic_radius.json +4 -1
  101. package/schema/properties_directory/elemental/electronegativity.json +4 -1
  102. package/schema/properties_directory/elemental/ionization_potential.json +6 -3
  103. package/schema/properties_directory/jupyter_notebook_endpoint.json +28 -0
  104. package/schema/properties_directory/non-scalar/average_potential_profile.json +5 -2
  105. package/schema/properties_directory/non-scalar/band_gaps.json +4 -2
  106. package/schema/properties_directory/non-scalar/band_structure.json +8 -2
  107. package/schema/properties_directory/non-scalar/charge_density_profile.json +5 -2
  108. package/schema/properties_directory/non-scalar/density_of_states.json +6 -2
  109. package/schema/properties_directory/non-scalar/dielectric_tensor.json +4 -2
  110. package/schema/properties_directory/non-scalar/file_content.json +2 -1
  111. package/schema/properties_directory/non-scalar/final_structure.json +25 -0
  112. package/schema/properties_directory/non-scalar/hubbard_u.json +5 -2
  113. package/schema/properties_directory/non-scalar/hubbard_v.json +7 -26
  114. package/schema/properties_directory/non-scalar/hubbard_v_nn.json +12 -2
  115. package/schema/properties_directory/non-scalar/is_relaxed.json +25 -0
  116. package/schema/properties_directory/non-scalar/phonon_dispersions.json +5 -2
  117. package/schema/properties_directory/non-scalar/phonon_dos.json +5 -2
  118. package/schema/properties_directory/non-scalar/potential_profile.json +5 -2
  119. package/schema/properties_directory/non-scalar/reaction_energy_profile.json +5 -2
  120. package/schema/properties_directory/non-scalar/stress_tensor.json +8 -2
  121. package/schema/properties_directory/non-scalar/total_energy_contributions.json +25 -5
  122. package/schema/properties_directory/non-scalar/vibrational_spectrum.json +5 -2
  123. package/schema/properties_directory/non-scalar/workflow.json +21 -0
  124. package/schema/properties_directory/reusable/hubbard_parameters.json +36 -0
  125. package/schema/properties_directory/scalar/electron_affinity.json +5 -2
  126. package/schema/properties_directory/scalar/fermi_energy.json +5 -2
  127. package/schema/properties_directory/scalar/formation_energy.json +5 -2
  128. package/schema/properties_directory/scalar/ionization_potential.json +5 -2
  129. package/schema/properties_directory/scalar/pressure.json +6 -2
  130. package/schema/properties_directory/scalar/reaction_energy_barrier.json +5 -2
  131. package/schema/properties_directory/scalar/surface_energy.json +5 -2
  132. package/schema/properties_directory/scalar/total_energy.json +6 -2
  133. package/schema/properties_directory/scalar/total_force.json +6 -2
  134. package/schema/properties_directory/scalar/valence_band_offset.json +5 -2
  135. package/schema/properties_directory/scalar/zero_point_energy.json +5 -2
  136. package/schema/properties_directory/structural/atomic_forces.json +7 -2
  137. package/schema/properties_directory/structural/basis/atomic_constraints_property.json +5 -1
  138. package/schema/properties_directory/structural/basis/boundary_conditions.json +25 -0
  139. package/schema/properties_directory/structural/lattice/units.json +1 -1
  140. package/schema/properties_directory/structural/magnetic_moments.json +7 -2
  141. package/schema/properties_directory/structural/patterns/functional_group.json +4 -1
  142. package/schema/properties_directory/structural/patterns/ring.json +4 -1
  143. package/schema/properties_directory/structural/patterns/special_bond.json +4 -1
  144. package/schema/properties_directory/workflow/convergence/electronic.json +4 -2
  145. package/schema/properties_directory/workflow/convergence/ionic.json +8 -3
  146. package/schema/property/holder.json +180 -0
  147. package/schema/property/meta_holder.json +42 -0
  148. package/schema/property/proto_holder.json +51 -0
  149. package/schema/property/source.json +5 -2
  150. package/schema/workflow/base_flow.json +2 -16
  151. package/schema/workflow/unit/io/db.json +1 -2
  152. package/schema/workflow/unit/io/object_storage.json +1 -2
  153. package/schema/workflow/unit/io.json +1 -1
  154. package/dist/js/example/software_directory/ml/exabyteml.json +0 -6
  155. package/dist/js/example/software_directory/ml/unit/execution/evaluate/cross_validate.json +0 -20
  156. package/dist/js/example/software_directory/ml/unit/execution/initialize.json +0 -23
  157. package/dist/js/example/software_directory/ml/unit/execution/score.json +0 -18
  158. package/dist/js/example/software_directory/ml/unit/execution/train.json +0 -29
  159. package/dist/js/example/software_directory/ml/unit/processing/data_transformation/manipulation.json +0 -14
  160. package/dist/js/example/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.json +0 -26
  161. package/dist/js/example/software_directory/ml/unit/processing/feature_selection/filter_based.json +0 -13
  162. package/dist/js/schema/property/base.json +0 -346
  163. package/dist/js/schema/property/meta.json +0 -346
  164. package/dist/js/schema/property/raw.json +0 -346
  165. package/dist/js/schema/software_directory/ml/exabyteml.json +0 -23
  166. package/dist/js/schema/software_directory/ml/unit/execution/evaluate/cross_validate.json +0 -657
  167. package/dist/js/schema/software_directory/ml/unit/execution/initialize.json +0 -661
  168. package/dist/js/schema/software_directory/ml/unit/execution/score.json +0 -647
  169. package/dist/js/schema/software_directory/ml/unit/execution/train.json +0 -670
  170. package/dist/js/schema/software_directory/ml/unit/execution.json +0 -2636
  171. package/dist/js/schema/software_directory/ml/unit/processing/data_transformation/manipulation.json +0 -269
  172. package/dist/js/schema/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.json +0 -289
  173. package/dist/js/schema/software_directory/ml/unit/processing/data_transformation.json +0 -293
  174. package/dist/js/schema/software_directory/ml/unit/processing/feature_selection/filter_based.json +0 -264
  175. package/dist/js/schema/software_directory/ml/unit/processing/feature_selection.json +0 -268
  176. package/dist/js/schema/software_directory/ml/unit/processing.json +0 -564
  177. package/example/software_directory/ml/exabyteml.json +0 -6
  178. package/example/software_directory/ml/unit/execution/evaluate/cross-validate.json +0 -17
  179. package/example/software_directory/ml/unit/execution/initialize.json +0 -20
  180. package/example/software_directory/ml/unit/execution/score.json +0 -15
  181. package/example/software_directory/ml/unit/execution/train.json +0 -26
  182. package/example/software_directory/ml/unit/processing/data_transformation/manipulation.json +0 -14
  183. package/example/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.json +0 -26
  184. package/example/software_directory/ml/unit/processing/feature_selection/filter_based.json +0 -13
  185. package/schema/property/base.json +0 -58
  186. package/schema/property/meta.json +0 -11
  187. package/schema/property/raw.json +0 -58
  188. package/schema/software_directory/ml/exabyteml.json +0 -23
  189. package/schema/software_directory/ml/unit/execution/evaluate/cross-validate.json +0 -26
  190. package/schema/software_directory/ml/unit/execution/initialize.json +0 -30
  191. package/schema/software_directory/ml/unit/execution/score.json +0 -14
  192. package/schema/software_directory/ml/unit/execution/train.json +0 -39
  193. package/schema/software_directory/ml/unit/execution.json +0 -17
  194. package/schema/software_directory/ml/unit/processing/data_transformation/manipulation.json +0 -50
  195. package/schema/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.json +0 -70
  196. package/schema/software_directory/ml/unit/processing/data_transformation.json +0 -8
  197. package/schema/software_directory/ml/unit/processing/feature_selection/filter_based.json +0 -45
  198. package/schema/software_directory/ml/unit/processing/feature_selection.json +0 -8
  199. package/schema/software_directory/ml/unit/processing.json +0 -11
@@ -10,7 +10,8 @@
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  },
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  {
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  "name": "ionization_potential",
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- "value": 7.7
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+ "value": 7.7,
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+ "units": "eV"
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  }
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  ],
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  "symbol": "Si"
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  "name": "ionization_potential",
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+ "value": 7.7,
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+ "units": "eV"
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  {
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+ "name": "convergence_electronic",
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  "data": [
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+ "name": "convergence_ionic",
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  "data": [
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  {
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  "electronic": {
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  "cls": "Account",
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  "slug": "exabyte"
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  },
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+ "repetition": 0,
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  "schemaVersion": "0.2.0",
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  "slug": "pressure",
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  "source": {
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- "_id": "nDAavgjrT5ezwFgod",
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- "owner": {
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- "_id": "HtxACY2wX4b2hS8Rv",
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- "cls": "Account",
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- "slug": "exabyte"
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- },
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- "title": "My Calculation"
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- }
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+ "type": "exabyte",
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+ "info": {
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+ "jobId": "XnYKCmgaAAzSQH5ac",
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+ "unitId": "873d0293d04af431d31f07a0-pw-scf"
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+ }
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+ },
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+ "exabyteId": [
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+ "XnYKCmgaAAzSQH5ac"
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+ ]
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  }
@@ -8,5 +8,6 @@
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  "REGION": "us-east-1",
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  "SIZE": 6582,
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  "TIMESTAMP": "1614217411"
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+ },
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+ "filetype": "text/html"
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  "properties": {
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  "xDataArray": {
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  "description": "array containing values of x Axis",
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+ "items": {
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+ "type": "number"
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+ },
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+ }
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+ }
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+ ]
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  "yDataSeries": {
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  "$schema": "http://json-schema.org/draft-07/schema#",
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  "minItems": 1,
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  }
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- "legend": {
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- "description": "Legend of y Axis data series",
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- "minItems": 1,
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- },
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  "xDataArray": {
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  "description": "array containing values of x Axis",
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+ "type": "array",
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+ "items": {
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+ "oneOf": [
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+ {
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+ "type": "number"
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+ },
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+ {
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+ "type": "array",
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+ "type": "number"
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+ }
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+ }
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+ ]
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+ }
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  "yDataSeries": {
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  "$schema": "http://json-schema.org/draft-07/schema#",
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@@ -1,5 +1,5 @@
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  {
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- "$id": "core/reusable/axis-enum",
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+ "$id": "core/primitive/axis-3d-names-enum",
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  "$schema": "http://json-schema.org/draft-07/schema#",
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  "title": "Axis Enum",
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  "type": "string",
@@ -2,11 +2,11 @@
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  "$id": "core/reference/exabyte",
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  "$schema": "http://json-schema.org/draft-07/schema#",
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  "type": "object",
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+ "required": [
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+ "jobId",
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+ "unitId"
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+ ],
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  "properties": {
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- "materialId": {
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- "description": "Material's identity. Used for protoProperties.",
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- },
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  "jobId": {
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  "description": "Job's identity",
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  "type": "string"
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  {
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- "$id": "core/reusable/coordinate-conditions",
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+ "$id": "core/reusable/coordinate-conditions/index",
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  "$schema": "http://json-schema.org/draft-07/schema#",
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  "title": "Coordinate Conditions Schema",
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  "description": "Combined schema for all coordinate condition types",
@@ -13,7 +13,7 @@
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  "kJ/mol",
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  "$schema": "http://json-schema.org/draft-07/schema#",
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  "title": "kpoint schema",
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  "description": "A k-point is a point in reciprocal space of a crystal.",
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  {
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  "title": "Materials Definitions",
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  "form_factor": {
5
5
  "description": "Form factor of the material",
@@ -137,6 +137,7 @@
137
137
  "description": "atomic radius",
138
138
  "type": "object",
139
139
  "required": [
140
+ "name",
140
141
  "value"
141
142
  ],
142
143
  "properties": {
@@ -170,6 +171,7 @@
170
171
  "description": "electronegativity for the element (Pauling scale)",
171
172
  "type": "object",
172
173
  "required": [
174
+ "name",
173
175
  "value"
174
176
  ],
175
177
  "properties": {
@@ -185,10 +187,11 @@
185
187
  },
186
188
  {
187
189
  "$schema": "http://json-schema.org/draft-07/schema#",
188
- "title": "ionization potential",
189
- "description": "ionization potential for the element",
190
+ "title": "Ionization potential elemental property schema",
190
191
  "type": "object",
191
192
  "required": [
193
+ "name",
194
+ "units",
192
195
  "value"
193
196
  ],
194
197
  "properties": {