@mastra/mcp-docs-server 1.1.5 → 1.1.6

package/.docs/docs/rag/overview.md

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+# RAG (Retrieval-Augmented Generation) in Mastra
+
+RAG in Mastra helps you enhance LLM outputs by incorporating relevant context from your own data sources, improving accuracy and grounding responses in real information.
+
+Mastra's RAG system provides:
+
+- Standardized APIs to process and embed documents
+- Support for multiple vector stores
+- Chunking and embedding strategies for optimal retrieval
+- Observability for tracking embedding and retrieval performance
+
+## Example
+
+To implement RAG, you process your documents into chunks, create embeddings, store them in a vector database, and then retrieve relevant context at query time.
+
+```ts
+import { embedMany } from 'ai'
+import { PgVector } from '@mastra/pg'
+import { MDocument } from '@mastra/rag'
+import { z } from 'zod'
+
+// 1. Initialize document
+const doc = MDocument.fromText(`Your document text here...`)
+
+// 2. Create chunks
+const chunks = await doc.chunk({
+  strategy: 'recursive',
+  size: 512,
+  overlap: 50,
+})
+
+// 3. Generate embeddings; we need to pass the text of each chunk
+import { ModelRouterEmbeddingModel } from '@mastra/core/llm'
+
+const { embeddings } = await embedMany({
+  values: chunks.map(chunk => chunk.text),
+  model: new ModelRouterEmbeddingModel('openai/text-embedding-3-small'),
+})
+
+// 4. Store in vector database
+const pgVector = new PgVector({
+  id: 'pg-vector',
+  connectionString: process.env.POSTGRES_CONNECTION_STRING,
+})
+await pgVector.upsert({
+  indexName: 'embeddings',
+  vectors: embeddings,
+}) // using an index name of 'embeddings'
+
+// 5. Query similar chunks
+const results = await pgVector.query({
+  indexName: 'embeddings',
+  queryVector: queryVector,
+  topK: 3,
+}) // queryVector is the embedding of the query
+
+console.log('Similar chunks:', results)
+```
+
+This example shows the essentials: initialize a document, create chunks, generate embeddings, store them, and query for similar content.
+
+## Document Processing
+
+The basic building block of RAG is document processing. Documents can be chunked using various strategies (recursive, sliding window, etc.) and enriched with metadata. See the [chunking and embedding doc](https://mastra.ai/docs/rag/chunking-and-embedding).
+
+## Vector Storage
+
+Mastra supports multiple vector stores for embedding persistence and similarity search, including pgvector, Pinecone, Qdrant, and MongoDB. See the [vector database doc](https://mastra.ai/docs/rag/vector-databases).
+
+## More resources
+
+- [Chain of Thought RAG Example](https://github.com/mastra-ai/mastra/tree/main/examples/basics/rag/cot-rag)

package/.docs/docs/rag/retrieval.md

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+# Retrieval in RAG Systems
+
+After storing embeddings, you need to retrieve relevant chunks to answer user queries.
+
+Mastra provides flexible retrieval options with support for semantic search, filtering, and re-ranking.
+
+## How Retrieval Works
+
+1. The user's query is converted to an embedding using the same model used for document embeddings
+2. This embedding is compared to stored embeddings using vector similarity
+3. The most similar chunks are retrieved and can be optionally:
+
+- Filtered by metadata
+- Re-ranked for better relevance
+- Processed through a knowledge graph
+
+## Basic Retrieval
+
+The simplest approach is direct semantic search. This method uses vector similarity to find chunks that are semantically similar to the query:
+
+```ts
+import { embed } from 'ai'
+import { PgVector } from '@mastra/pg'
+import { ModelRouterEmbeddingModel } from '@mastra/core/llm'
+
+// Convert query to embedding
+const { embedding } = await embed({
+  value: 'What are the main points in the article?',
+  model: new ModelRouterEmbeddingModel('openai/text-embedding-3-small'),
+})
+
+// Query vector store
+const pgVector = new PgVector({
+  id: 'pg-vector',
+  connectionString: process.env.POSTGRES_CONNECTION_STRING,
+})
+const results = await pgVector.query({
+  indexName: 'embeddings',
+  queryVector: embedding,
+  topK: 10,
+})
+
+// Display results
+console.log(results)
+```
+
+The `topK` parameter specifies the maximum number of most similar results to return from the vector search.
+
+Results include both the text content and a similarity score:
+
+```ts
+[
+  {
+    text: 'Climate change poses significant challenges...',
+    score: 0.89,
+    metadata: { source: 'article1.txt' },
+  },
+  {
+    text: 'Rising temperatures affect crop yields...',
+    score: 0.82,
+    metadata: { source: 'article1.txt' },
+  },
+]
+```
+
+## Advanced Retrieval options
+
+### Metadata Filtering
+
+Filter results based on metadata fields to narrow down the search space. This approach - combining vector similarity search with metadata filters - is sometimes called hybrid vector search, as it merges semantic search with structured filtering criteria.
+
+This is useful when you have documents from different sources, time periods, or with specific attributes. Mastra provides a unified MongoDB-style query syntax that works across all supported vector stores.
+
+For detailed information about available operators and syntax, see the [Metadata Filters Reference](https://mastra.ai/reference/rag/metadata-filters).
+
+Basic filtering examples:
+
+```ts
+// Simple equality filter
+const results = await pgVector.query({
+  indexName: 'embeddings',
+  queryVector: embedding,
+  topK: 10,
+  filter: {
+    source: 'article1.txt',
+  },
+})
+
+// Numeric comparison
+const results = await pgVector.query({
+  indexName: 'embeddings',
+  queryVector: embedding,
+  topK: 10,
+  filter: {
+    price: { $gt: 100 },
+  },
+})
+
+// Multiple conditions
+const results = await pgVector.query({
+  indexName: 'embeddings',
+  queryVector: embedding,
+  topK: 10,
+  filter: {
+    category: 'electronics',
+    price: { $lt: 1000 },
+    inStock: true,
+  },
+})
+
+// Array operations
+const results = await pgVector.query({
+  indexName: 'embeddings',
+  queryVector: embedding,
+  topK: 10,
+  filter: {
+    tags: { $in: ['sale', 'new'] },
+  },
+})
+
+// Logical operators
+const results = await pgVector.query({
+  indexName: 'embeddings',
+  queryVector: embedding,
+  topK: 10,
+  filter: {
+    $or: [{ category: 'electronics' }, { category: 'accessories' }],
+    $and: [{ price: { $gt: 50 } }, { price: { $lt: 200 } }],
+  },
+})
+```
+
+Common use cases for metadata filtering:
+
+- Filter by document source or type
+- Filter by date ranges
+- Filter by specific categories or tags
+- Filter by numerical ranges (e.g., price, rating)
+- Combine multiple conditions for precise querying
+- Filter by document attributes (e.g., language, author)
+
+### Vector Query Tool
+
+Sometimes you want to give your agent the ability to query a vector database directly. The Vector Query Tool allows your agent to be in charge of retrieval decisions, combining semantic search with optional filtering and reranking based on the agent's understanding of the user's needs.
+
+```ts
+import { createVectorQueryTool } from '@mastra/rag'
+import { ModelRouterEmbeddingModel } from '@mastra/core/llm'
+
+const vectorQueryTool = createVectorQueryTool({
+  vectorStoreName: 'pgVector',
+  indexName: 'embeddings',
+  model: new ModelRouterEmbeddingModel('openai/text-embedding-3-small'),
+})
+```
+
+When creating the tool, pay special attention to the tool's name and description - these help the agent understand when and how to use the retrieval capabilities. For example, you might name it "SearchKnowledgeBase" and describe it as "Search through our documentation to find relevant information about X topic."
+
+This is particularly useful when:
+
+- Your agent needs to dynamically decide what information to retrieve
+- The retrieval process requires complex decision-making
+- You want the agent to combine multiple retrieval strategies based on context
+
+#### Database-Specific Configurations
+
+The Vector Query Tool supports database-specific configurations that enable you to leverage unique features and optimizations of different vector stores.
+
+> **Note:** These configurations are for **query-time options** like namespaces, performance tuning, and filtering—not for database connection setup.
+>
+> Connection credentials (URLs, auth tokens) are configured when you instantiate the vector store class (e.g., `new LibSQLVector({ url: '...' })`).
+
+```ts
+import { createVectorQueryTool } from '@mastra/rag'
+import { ModelRouterEmbeddingModel } from '@mastra/core/llm'
+
+// Pinecone with namespace
+const pineconeQueryTool = createVectorQueryTool({
+  vectorStoreName: 'pinecone',
+  indexName: 'docs',
+  model: new ModelRouterEmbeddingModel('openai/text-embedding-3-small'),
+  databaseConfig: {
+    pinecone: {
+      namespace: 'production', // Isolate data by environment
+    },
+  },
+})
+
+// pgVector with performance tuning
+const pgVectorQueryTool = createVectorQueryTool({
+  vectorStoreName: 'postgres',
+  indexName: 'embeddings',
+  model: new ModelRouterEmbeddingModel('openai/text-embedding-3-small'),
+  databaseConfig: {
+    pgvector: {
+      minScore: 0.7, // Filter low-quality results
+      ef: 200, // HNSW search parameter
+      probes: 10, // IVFFlat probe parameter
+    },
+  },
+})
+
+// Chroma with advanced filtering
+const chromaQueryTool = createVectorQueryTool({
+  vectorStoreName: 'chroma',
+  indexName: 'documents',
+  model: new ModelRouterEmbeddingModel('openai/text-embedding-3-small'),
+  databaseConfig: {
+    chroma: {
+      where: { category: 'technical' },
+      whereDocument: { $contains: 'API' },
+    },
+  },
+})
+
+// LanceDB with table specificity
+const lanceQueryTool = createVectorQueryTool({
+  vectorStoreName: 'lance',
+  indexName: 'documents',
+  model: new ModelRouterEmbeddingModel('openai/text-embedding-3-small'),
+  databaseConfig: {
+    lance: {
+      tableName: 'myVectors', // Specify which table to query
+      includeAllColumns: true, // Include all metadata columns in results
+    },
+  },
+})
+```
+
+**Key Benefits:**
+
+- **Pinecone namespaces**: Organize vectors by tenant, environment, or data type
+- **pgVector optimization**: Control search accuracy and speed with ef/probes parameters
+- **Quality filtering**: Set minimum similarity thresholds to improve result relevance
+- **LanceDB tables**: Separate data into tables for better organization and performance
+- **Runtime flexibility**: Override configurations dynamically based on context
+
+**Common Use Cases:**
+
+- Multi-tenant applications using Pinecone namespaces
+- Performance optimization in high-load scenarios
+- Environment-specific configurations (dev/staging/prod)
+- Quality-gated search results
+- Embedded, file-based vector storage with LanceDB for edge deployment scenarios
+
+You can also override these configurations at runtime using the request context:
+
+```ts
+import { RequestContext } from '@mastra/core/request-context'
+
+const requestContext = new RequestContext()
+requestContext.set('databaseConfig', {
+  pinecone: {
+    namespace: 'runtime-namespace',
+  },
+})
+
+await pineconeQueryTool.execute({ queryText: 'search query' }, { mastra, requestContext })
+```
+
+For detailed configuration options and advanced usage, see the [Vector Query Tool Reference](https://mastra.ai/reference/tools/vector-query-tool).
+
+### Vector Store Prompts
+
+Vector store prompts define query patterns and filtering capabilities for each vector database implementation. When implementing filtering, these prompts are required in the agent's instructions to specify valid operators and syntax for each vector store implementation.
+
+**pgVector**:
+
+```ts
+import { PGVECTOR_PROMPT } from '@mastra/pg'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${PGVECTOR_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**Pinecone**:
+
+```ts
+import { PINECONE_PROMPT } from '@mastra/pinecone'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${PINECONE_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**Qdrant**:
+
+```ts
+import { QDRANT_PROMPT } from '@mastra/qdrant'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${QDRANT_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**Chroma**:
+
+```ts
+import { CHROMA_PROMPT } from '@mastra/chroma'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${CHROMA_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**Astra**:
+
+```ts
+import { ASTRA_PROMPT } from '@mastra/astra'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${ASTRA_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**libSQL**:
+
+```ts
+import { LIBSQL_PROMPT } from '@mastra/libsql'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${LIBSQL_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**Upstash**:
+
+```ts
+import { UPSTASH_PROMPT } from '@mastra/upstash'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${UPSTASH_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**Vectorize**:
+
+```ts
+import { VECTORIZE_PROMPT } from '@mastra/vectorize'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${VECTORIZE_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**MongoDB**:
+
+```ts
+import { MONGODB_PROMPT } from '@mastra/mongodb'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${MONGODB_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**OpenSearch**:
+
+```ts
+import { OPENSEARCH_PROMPT } from '@mastra/opensearch'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${OPENSEARCH_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+**S3Vectors**:
+
+```ts
+import { S3VECTORS_PROMPT } from '@mastra/s3vectors'
+
+export const ragAgent = new Agent({
+  id: 'rag-agent',
+  name: 'RAG Agent',
+  model: 'openai/gpt-5.1',
+  instructions: `
+  Process queries using the provided context. Structure responses to be concise and relevant.
+  ${S3VECTORS_PROMPT}
+  `,
+  tools: { vectorQueryTool },
+})
+```
+
+### Re-ranking
+
+Initial vector similarity search can sometimes miss nuanced relevance. Re-ranking is a more computationally expensive process, but more accurate algorithm that improves results by:
+
+- Considering word order and exact matches
+- Applying more sophisticated relevance scoring
+- Using a method called cross-attention between query and documents
+
+Here's how to use re-ranking:
+
+```ts
+import { rerankWithScorer as rerank, MastraAgentRelevanceScorer } from '@mastra/rag'
+
+// Get initial results from vector search
+const initialResults = await pgVector.query({
+  indexName: 'embeddings',
+  queryVector: queryEmbedding,
+  topK: 10,
+})
+
+// Create a relevance scorer
+const relevanceProvider = new MastraAgentRelevanceScorer('relevance-scorer', 'openai/gpt-5.1')
+
+// Re-rank the results
+const rerankedResults = await rerank({
+  results: initialResults,
+  query,
+  scorer: relevanceProvider,
+  options: {
+    weights: {
+      semantic: 0.5, // How well the content matches the query semantically
+      vector: 0.3, // Original vector similarity score
+      position: 0.2, // Preserves original result ordering
+    },
+    topK: 10,
+  },
+})
+```
+
+The weights control how different factors influence the final ranking:
+
+- `semantic`: Higher values prioritize semantic understanding and relevance to the query
+- `vector`: Higher values favor the original vector similarity scores
+- `position`: Higher values help maintain the original ordering of results
+
+> **Note:** For semantic scoring to work properly during re-ranking, each result must include the text content in its `metadata.text` field.
+
+You can also use other relevance score providers like Cohere or ZeroEntropy:
+
+```ts
+const relevanceProvider = new CohereRelevanceScorer('rerank-v3.5')
+```
+
+```ts
+const relevanceProvider = new ZeroEntropyRelevanceScorer('zerank-1')
+```
+
+The re-ranked results combine vector similarity with semantic understanding to improve retrieval quality.
+
+For more details about re-ranking, see the [rerank()](https://mastra.ai/reference/rag/rerankWithScorer) method.
+
+For graph-based retrieval that follows connections between chunks, see the [GraphRAG](https://mastra.ai/docs/rag/graph-rag) documentation.