@mastra/deployer 1.66.1-alpha.0 → 1.67.0-alpha.3

package/dist/bundler/index.cjs

@@ -6,6 +6,7 @@ const require_services = require("../services-BLvNG7v7.cjs");
 const require_bundler = require("../bundler-qpSoNG9c.cjs");
 const require_bundlerOptions = require("../bundlerOptions-YF8eyxsX.cjs");
 let child_process = require("child_process");
+let crypto = require("crypto");
 let fs = require("fs");
 let fs_promises = require("fs/promises");
 let path = require("path");
@@ -167,6 +168,10 @@ const applySourceDependencyRange = (dependencyName, dependencyInfo, constraints)
 		version: declared
 	};
 };
+function toolIdForEntry(relativeEntryFile) {
+	const digest = (0, crypto.createHash)("sha256").update(relativeEntryFile).digest("hex");
+	return `${digest.slice(0, 8)}-${digest.slice(8, 12)}-${digest.slice(12, 16)}-${digest.slice(16, 20)}-${digest.slice(20, 32)}`;
+}
 var Bundler = class extends _mastra_core_bundler.MastraBundler {
 	analyzeOutputDir = ".build";
 	outputDir = "output";
@@ -319,7 +324,7 @@ var Bundler = class extends _mastra_core_bundler.MastraBundler {
 		}, null, 2));
 		this.logger.info("Wrote mastra-project.json for Software Factory project");
 	}
-	async getBundlerOptions(serverFile, mastraEntryFile, analyzedBundleInfo, toolsPaths, { enableSourcemap, enableMinify, enableEsmShim, externals }, additionalEntries) {
+	async getBundlerOptions(serverFile, mastraEntryFile, analyzedBundleInfo, toolsPaths, { enableSourcemap, enableMinify, enableEsmShim, externals }, additionalEntries, toolProjectRoot) {
 		const { workspaceRoot } = await require_analyze.getWorkspaceInformation({ mastraEntryFile });
 		const closestPkgJson = empathic_package.up({ cwd: (0, path.dirname)(mastraEntryFile) });
 		const projectRoot = closestPkgJson ? (0, path.dirname)(closestPkgJson) : process.cwd();
@@ -331,7 +336,7 @@ var Bundler = class extends _mastra_core_bundler.MastraBundler {
 			enableEsmShim,
 			externalsPreset: externals === true
 		});
-		const toolsInputOptions = await this.listToolsInputOptions(toolsPaths);
+		const toolsInputOptions = await this.listToolsInputOptions(toolsPaths, toolProjectRoot);
 		const entryInputs = {};
 		const virtualEntries = {};
 		const entries = {
@@ -357,8 +362,8 @@ var Bundler = class extends _mastra_core_bundler.MastraBundler {
 		if (toolsPaths.length === 0) return [defaultPaths];
 		return [...toolsPaths, defaultPaths];
 	}
-	async listToolsInputOptions(toolsPaths) {
-		const inputs = {};
+	async listToolsInputOptions(toolsPaths, projectRoot = process.cwd()) {
+		const entries = /* @__PURE__ */ new Map();
 		for (const toolPath of toolsPaths) {
 			const expandedPaths = await (0, tinyglobby.glob)(toolPath, {
 				absolute: true,
@@ -374,12 +379,12 @@ var Bundler = class extends _mastra_core_bundler.MastraBundler {
 					this.logger.warn("No entry file found, skipping", { path: path$1 });
 					continue;
 				}
-				const uniqueToolID = crypto.randomUUID();
 				const normalizedEntryFile = entryFile.replaceAll("\\", "/");
-				inputs[`tools/${uniqueToolID}`] = normalizedEntryFile;
+				const relativeEntryFile = (0, path.relative)(projectRoot, entryFile).replaceAll("\\", "/");
+				entries.set(relativeEntryFile, normalizedEntryFile);
 			} else this.logger.warn("Tool path does not exist, skipping", { path: path$1 });
 		}
-		return inputs;
+		return Object.fromEntries([...entries.entries()].sort(([first], [second]) => first < second ? -1 : first > second ? 1 : 0).map(([relativeEntryFile, entryFile]) => [`tools/${toolIdForEntry(relativeEntryFile)}`, entryFile]));
 	}
 	async _bundle(serverFile, mastraEntryFile, { projectRoot, outputDirectory, enableEsmShim = true }, toolsPaths = [], bundleLocation = (0, path.join)(outputDirectory, this.outputDir)) {
 		const analyzeDir = (0, path.join)(outputDirectory, this.analyzeOutputDir);
@@ -394,7 +399,7 @@ var Bundler = class extends _mastra_core_bundler.MastraBundler {
 		};
 		let analyzedBundleInfo;
 		try {
-			const resolvedToolsPaths = await this.listToolsInputOptions(toolsPaths);
+			const resolvedToolsPaths = await this.listToolsInputOptions(toolsPaths, projectRoot);
 			analyzedBundleInfo = await require_analyze.analyzeBundle([
 				serverFile,
 				...Object.values(additionalEntries),
@@ -452,7 +457,7 @@ var Bundler = class extends _mastra_core_bundler.MastraBundler {
 				logger: this.logger
 			});
 			this.logger.info("Bundling Mastra application");
-			const inputOptions = await this.getBundlerOptions(serverFile, mastraEntryFile, analyzedBundleInfo, toolsPaths, internalBundlerOptions, additionalEntries);
+			const inputOptions = await this.getBundlerOptions(serverFile, mastraEntryFile, analyzedBundleInfo, toolsPaths, internalBundlerOptions, additionalEntries, projectRoot);
 			await (await this.createBundler({
 				...inputOptions,
 				logLevel: inputOptions.logLevel === "silent" ? "warn" : inputOptions.logLevel,
@@ -509,8 +514,8 @@ export const tools = [${toolsExports.join(", ")}]`);
 			}, error);
 		}
 	}
-	async lint(_entryFile, _outputDirectory, toolsPaths) {
-		const toolsInputOptions = await this.listToolsInputOptions(toolsPaths);
+	async lint(_entryFile, outputDirectory, toolsPaths) {
+		const toolsInputOptions = await this.listToolsInputOptions(toolsPaths, (0, path.dirname)(outputDirectory));
 		const toolsLength = Object.keys(toolsInputOptions).length;
 		if (toolsLength > 0) this.logger.info("Found tools", { count: toolsLength });
 	}

package/dist/bundler/index.cjs.map

@@ -1 +1 @@
-{"version":3,"file":"index.cjs","names":["pkg","getPackageName","MastraBundler","createBundlerUtil","getBundlerOptions","analyzeBundle","DepsService","fsExtra","MastraError","ErrorDomain","ErrorCategory","getWorkspaceInformation","getInputOptions","slash","posix","path","FileService","isBareModuleSpecifier","collectTransitiveWorkspaceDependencies","packWorkspaceDependencies","shouldSkipInstall"],"sources":["../../src/bundler/index.ts"],"sourcesContent":["import { execSync } from 'node:child_process';\nimport { existsSync } from 'node:fs';\nimport { readFile, rm, stat, writeFile } from 'node:fs/promises';\nimport { dirname, join, posix } from 'node:path';\nimport { MastraBundler } from '@mastra/core/bundler';\nimport { MastraError, ErrorDomain, ErrorCategory } from '@mastra/core/error';\nimport type { Config } from '@mastra/core/mastra';\nimport virtual from '@rollup/plugin-virtual';\nimport * as pkg from 'empathic/package';\nimport fsExtra, { copy, ensureDir, emptyDir, readJSON } from 'fs-extra/esm';\nimport type { InputOptions, OutputOptions } from 'rollup';\nimport { glob } from 'tinyglobby';\nimport { analyzeBundle } from '../build/analyze';\nimport { createBundler as createBundlerUtil, getInputOptions } from '../build/bundler';\nimport { getBundlerOptions } from '../build/bundlerOptions';\nimport type { BundlerOptions, ExternalDependencyInfo } from '../build/types';\nimport type { BundlerPlatform } from '../build/utils';\nimport { getPackageName, isBareModuleSpecifier, shouldSkipInstall, slash } from '../build/utils';\nimport { DepsService } from '../services/deps';\nimport { FileService } from '../services/fs';\nimport {\n  collectTransitiveWorkspaceDependencies,\n  getWorkspaceInformation,\n  packWorkspaceDependencies,\n} from './workspaceDependencies';\n\nexport type { BundlerOptions, ExternalDependencyInfo } from '../build/types';\nexport type { BundlerPlatform } from '../build/utils';\n\nexport const IS_DEFAULT = Symbol('IS_DEFAULT');\n\nconst NPM_ALIAS_PREFIX = 'npm:';\n/** Characters a registry range or dist tag can contain. Protocols need `:`, git shorthand needs `/` or `#`. */\nconst REGISTRY_SPEC_PATTERN = /^[A-Za-z0-9.+_^~><=*|!\\s-]+$/;\nconst PACKAGE_NAME_PATTERN = /^(?:@[A-Za-z0-9._-]+\\/)?[A-Za-z0-9._-]+$/;\nconst TARBALL_SUFFIX_PATTERN = /\\.(?:tgz|tar\\.gz|tar)$/i;\n/** npm reads a value starting like this as a path, whatever follows. A bare `~` is a semver range. */\nconst FILE_SPEC_PREFIX_PATTERN = /^(?:\\.|~[/\\\\]|[/\\\\]|[A-Za-z]:[/\\\\])/;\n/** A range admitting any published version: `*`, `x`, `>=0`, and any union containing one. */\nconst UNBOUNDED_RANGE_PATTERN = /(?:^|\\|\\||\\s)\\s*(?:[*xX]|>=?\\s*0(?:\\.0)*(?:\\.0)*)\\s*(?:$|\\|\\|)/;\n\n/**\n * Constraints declared by the source app, plus the packages some resolution field pins.\n *\n * Only `dependencies` values are read. Override fields contribute names, never values: which of\n * `overrides`, `resolutions`, `pnpm.overrides` or `pnpm-workspace.yaml` a given install honoured\n * depends on the package manager and its version, so reproducing that precedence would mean\n * emulating three package managers. A name appearing in any of them is enough to know the resolved\n * version was chosen deliberately, which is all this needs.\n */\nexport type SourceDependencyConstraints = {\n  dependencies: Record<string, string>;\n  pinnedByResolutionField: Set<string>;\n};\n\nconst toStringRecord = (value: unknown): Record<string, string> => {\n  if (!value || typeof value !== 'object' || Array.isArray(value)) {\n    return {};\n  }\n\n  return Object.fromEntries(\n    Object.entries(value).filter((entry): entry is [string, string] => typeof entry[1] === 'string'),\n  );\n};\n\n/**\n * True when a specifier is something the isolated install in `.mastra/output` can resolve from the\n * registry: a semver range, a dist tag, a wildcard, or an npm alias whose target is a registry\n * package and range.\n *\n * This is an allowlist rather than a denylist of known protocols, so an unfamiliar protocol is\n * rejected without this code having to know it exists. The output directory is not a workspace, has\n * no catalog definitions and has a different relative-path base, so `catalog:`, `workspace:`,\n * `file:`, `link:` and git specifiers are all either uninstallable there or point somewhere else.\n */\nexport const isRegistryVersionSpec = (spec: string): boolean => {\n  if (FILE_SPEC_PREFIX_PATTERN.test(spec) || TARBALL_SUFFIX_PATTERN.test(spec)) {\n    return false;\n  }\n\n  if (spec.startsWith(NPM_ALIAS_PREFIX)) {\n    const alias = spec.slice(NPM_ALIAS_PREFIX.length);\n    // Skip index 0 so `npm:@scope/pkg` reads as an alias with no range rather than an empty name.\n    const rangeSeparator = alias.lastIndexOf('@');\n    const name = rangeSeparator > 0 ? alias.slice(0, rangeSeparator) : alias;\n    const range = rangeSeparator > 0 ? alias.slice(rangeSeparator + 1) : '*';\n\n    return PACKAGE_NAME_PATTERN.test(name) && isRegistryVersionSpec(range);\n  }\n\n  return REGISTRY_SPEC_PATTERN.test(spec);\n};\n\n/**\n * True when a specifier names a version the output install can be held to.\n *\n * A range admitting anything (`*`, `latest`, `>=0`, an alias with no range) is looser than the\n * version already resolved, so writing it would let a later install pull something the bundle was\n * never analyzed against.\n */\nconst isBoundedVersionSpec = (spec: string): boolean => {\n  const range = spec.startsWith(NPM_ALIAS_PREFIX)\n    ? (() => {\n        const alias = spec.slice(NPM_ALIAS_PREFIX.length);\n        const rangeSeparator = alias.lastIndexOf('@');\n        return rangeSeparator > 0 ? alias.slice(rangeSeparator + 1) : '';\n      })()\n    : spec;\n\n  return /\\d/.test(range) && !UNBOUNDED_RANGE_PATTERN.test(range);\n};\n\nconst readManifest = async (manifestPath: string | undefined): Promise<Record<string, unknown> | undefined> => {\n  if (!manifestPath) {\n    return undefined;\n  }\n\n  try {\n    const manifest = await readJSON(manifestPath);\n    return manifest && typeof manifest === 'object' ? manifest : undefined;\n  } catch {\n    // A manifest that cannot be read tells us nothing about intent.\n    return undefined;\n  }\n};\n\n/** Collect the package names a manifest's resolution fields pin, ignoring their values. */\nconst collectManifestPinnedNames = (manifest: Record<string, unknown> | undefined, pinned: Set<string>) => {\n  const pnpmSection = manifest?.pnpm;\n  const records = [\n    manifest?.overrides,\n    manifest?.resolutions,\n    pnpmSection && typeof pnpmSection === 'object' ? (pnpmSection as { overrides?: unknown }).overrides : undefined,\n  ];\n\n  for (const record of records) {\n    if (record && typeof record === 'object' && !Array.isArray(record)) {\n      for (const key of Object.keys(record)) {\n        pinned.add(key);\n      }\n    }\n  }\n};\n\n/**\n * Collect the names under a top-level `overrides:` block in `pnpm-workspace.yaml`.\n *\n * pnpm moved overrides out of `package.json` into this file, so a workspace on a current pnpm keeps\n * them only here. Reading names off the indented block avoids a YAML dependency, the same tradeoff\n * `copyPnpmWorkspaceSettings` already makes for the top-level keys it copies.\n */\nconst collectPnpmWorkspacePinnedNames = (source: string, pinned: Set<string>) => {\n  const lines = source.split(/\\r?\\n/);\n  let insideOverrides = false;\n\n  for (const line of lines) {\n    if (/^\\S/.test(line)) {\n      insideOverrides = /^overrides:\\s*$/.test(line);\n      continue;\n    }\n\n    if (!insideOverrides) {\n      continue;\n    }\n\n    const key = /^\\s+(?:'([^']+)'|\"([^\"]+)\"|([^'\"\\s:][^:]*?))\\s*:/.exec(line);\n    if (key) {\n      pinned.add((key[1] ?? key[2] ?? key[3] ?? '').trim());\n    }\n  }\n};\n\n/**\n * Read the constraints the source app declared.\n *\n * `dependencies` come from the manifest at `projectRoot`, the package the build was invoked for and\n * whose directory receives the output, falling back to the manifest above the entry file. Anchoring\n * on `projectRoot` rather than the entry file keeps the answer deterministic when the entry handed\n * to the bundler is a generated wrapper rather than the app's own source file.\n *\n * Resolution-field names are collected from both that manifest and the workspace root, including the\n * root `pnpm-workspace.yaml`, because a name pinned anywhere means the resolved version may have been\n * chosen deliberately rather than hoisted by accident.\n */\nexport const getSourceDependencyConstraints = async ({\n  projectRoot,\n  mastraEntryFile,\n  workspaceRoot,\n}: {\n  projectRoot: string;\n  mastraEntryFile: string;\n  workspaceRoot?: string;\n}): Promise<SourceDependencyConstraints> => {\n  const manifestPaths = [pkg.up({ cwd: projectRoot }), pkg.up({ cwd: dirname(mastraEntryFile) })].filter(\n    (entry, index, entries): entry is string => !!entry && entries.indexOf(entry) === index,\n  );\n\n  if (workspaceRoot) {\n    manifestPaths.push(join(workspaceRoot, 'package.json'));\n  }\n\n  const pinnedByResolutionField = new Set<string>();\n  let dependencies: Record<string, string> | undefined;\n\n  for (const manifestPath of manifestPaths) {\n    const manifest = await readManifest(manifestPath);\n    if (!manifest) {\n      continue;\n    }\n\n    // Nearest manifest wins, and an empty `dependencies` record is still that package's answer.\n    dependencies ??= toStringRecord(manifest.dependencies);\n    collectManifestPinnedNames(manifest, pinnedByResolutionField);\n  }\n\n  if (workspaceRoot) {\n    try {\n      collectPnpmWorkspacePinnedNames(\n        await readFile(join(workspaceRoot, 'pnpm-workspace.yaml'), 'utf-8'),\n        pinnedByResolutionField,\n      );\n    } catch {\n      // No pnpm workspace config, or unreadable: nothing to learn from it.\n    }\n  }\n\n  return { dependencies: dependencies ?? {}, pinnedByResolutionField };\n};\n\nconst findDeclaredConstraint = (\n  constraints: SourceDependencyConstraints,\n  dependencyName: string,\n): string | undefined => {\n  const names = [dependencyName, getPackageName(dependencyName)].filter(\n    (name, index, all): name is string => !!name && all.indexOf(name) === index,\n  );\n\n  for (const name of names) {\n    // A pinned package's resolved version is the deliberate answer, so leave it as `main` wrote it.\n    if (constraints.pinnedByResolutionField.has(name)) {\n      return undefined;\n    }\n  }\n\n  for (const name of names) {\n    const declared = (constraints.dependencies[name] ?? '').trim();\n    if (declared && isBoundedVersionSpec(declared) && isRegistryVersionSpec(declared)) {\n      return declared;\n    }\n  }\n\n  return undefined;\n};\n\n/**\n * Prefer the constraint the app declared over the version resolved from `node_modules`.\n *\n * The resolved version is whatever the install happened to hoist, so an app declaring `zod: ^4.3.6`\n * next to a hoisted `zod@3.25.76` gets the hoisted version written into the output manifest and the\n * isolated install then locks it in.\n */\nexport const applySourceDependencyRange = (\n  dependencyName: string,\n  dependencyInfo: ExternalDependencyInfo,\n  constraints: SourceDependencyConstraints,\n): ExternalDependencyInfo => {\n  const declared = findDeclaredConstraint(constraints, dependencyName);\n  if (!declared) {\n    return dependencyInfo;\n  }\n\n  if (declared.startsWith(NPM_ALIAS_PREFIX)) {\n    return { ...dependencyInfo, packageSpec: declared };\n  }\n\n  // `packageSpec` is set only when the resolved package's own name differs from the requested one, so\n  // a bare range under this key describes a different package and the resolved alias is the answer.\n  if (dependencyInfo.packageSpec) {\n    return dependencyInfo;\n  }\n\n  return { ...dependencyInfo, version: declared };\n};\n\nexport abstract class Bundler extends MastraBundler {\n  protected analyzeOutputDir = '.build';\n  protected outputDir = 'output';\n  protected platform: BundlerPlatform = 'node';\n\n  constructor(name: string, component: 'BUNDLER' | 'DEPLOYER' = 'BUNDLER') {\n    super({ name, component });\n  }\n\n  async prepare(outputDirectory: string): Promise<void> {\n    // Clean up the output directory first\n    await emptyDir(outputDirectory);\n\n    await ensureDir(join(outputDirectory, this.analyzeOutputDir));\n    await ensureDir(join(outputDirectory, this.outputDir));\n  }\n\n  async writePackageJson(\n    outputDirectory: string,\n    dependencies: Map<string, string | ExternalDependencyInfo>,\n    resolutions?: Record<string, string>,\n  ) {\n    this.logger.debug(\"Writing project's package.json\");\n\n    await ensureDir(outputDirectory);\n    const pkgPath = join(outputDirectory, 'package.json');\n\n    const dependenciesMap = new Map();\n    for (const [key, value] of dependencies.entries()) {\n      const dependencyValue = typeof value === 'string' ? value : (value.packageSpec ?? value.version ?? 'latest');\n      if (key.startsWith('@')) {\n        // Handle scoped packages (e.g. @org/package)\n        const pkgChunks = key.split('/');\n        dependenciesMap.set(`${pkgChunks[0]}/${pkgChunks[1]}`, dependencyValue);\n      } else {\n        // For non-scoped packages, take only the first part before any slash\n        const pkgName = key.split('/')[0] || key;\n        dependenciesMap.set(pkgName, dependencyValue);\n      }\n    }\n\n    await writeFile(\n      pkgPath,\n      JSON.stringify(\n        {\n          name: 'server',\n          version: '1.0.0',\n          private: true,\n          type: 'module',\n          main: 'index.mjs',\n          scripts: {\n            start: 'node ./index.mjs',\n          },\n          dependencies: Object.fromEntries(dependenciesMap.entries()),\n          ...(Object.keys(resolutions ?? {}).length > 0 && { resolutions }),\n        },\n        null,\n        2,\n      ),\n    );\n  }\n\n  protected createBundler(inputOptions: InputOptions, outputOptions: Partial<OutputOptions> & { dir: string }) {\n    return createBundlerUtil(inputOptions, outputOptions);\n  }\n\n  protected async getUserBundlerOptions(\n    mastraEntryFile: string,\n    outputDirectory: string,\n  ): Promise<NonNullable<Config['bundler']>> {\n    const defaultBundlerOptions: Config['bundler'] = {\n      externals: [],\n      sourcemap: false,\n      transpilePackages: [],\n      [IS_DEFAULT]: true,\n    } as const;\n\n    try {\n      const bundlerOptions = await getBundlerOptions(mastraEntryFile, outputDirectory);\n\n      return bundlerOptions ?? defaultBundlerOptions;\n    } catch (error) {\n      this.logger.debug('Failed to get bundler options, sourcemap will be disabled', { error });\n    }\n\n    return defaultBundlerOptions;\n  }\n\n  protected async analyze(entry: string | string[], mastraFile: string, outputDirectory: string) {\n    return await analyzeBundle(\n      ([] as string[]).concat(entry),\n      mastraFile,\n      {\n        outputDir: join(outputDirectory, this.analyzeOutputDir),\n        projectRoot: outputDirectory,\n        platform: this.platform,\n      },\n      this.logger,\n    );\n  }\n\n  protected pnpmNodeLinker?: 'hoisted';\n\n  protected getAdditionalEntries(): Record<string, string> {\n    return {};\n  }\n\n  protected async installDependencies(\n    outputDirectory: string,\n    rootDir = process.cwd(),\n    pnpmOverrides?: Record<string, string>,\n  ) {\n    const deps = new DepsService(rootDir);\n    deps.__setLogger(this.logger);\n\n    await deps.install({\n      dir: join(outputDirectory, this.outputDir),\n      pnpmOverrides,\n      pnpmNodeLinker: this.pnpmNodeLinker,\n    });\n  }\n\n  /**\n   * Generate a package-lock.json for the output directory so that deploy targets\n   * can use `npm ci` instead of `npm install`, skipping version resolution entirely.\n   * This is a lockfile-only operation — no packages are downloaded.\n   *\n   * Temporarily moves node_modules out of the way because pnpm's symlink-based\n   * layout confuses npm's arborist, then restores it afterwards so that\n   * `mastra start` (or wrangler) can still resolve dependencies at runtime.\n   */\n  private async generateNpmLockfile(outputDir: string): Promise<void> {\n    const nodeModules = join(outputDir, 'node_modules');\n    const nodeModulesTmp = join(outputDir, 'node_modules.__tmp');\n    let movedNodeModules = false;\n    try {\n      // Move node_modules aside — pnpm's symlink layout confuses npm's arborist\n      if (await fsExtra.pathExists(nodeModules)) {\n        await fsExtra.move(nodeModules, nodeModulesTmp, { overwrite: true });\n        movedNodeModules = true;\n      }\n      execSync('npm install --package-lock-only --force', {\n        cwd: outputDir,\n        stdio: 'pipe',\n        timeout: 60_000,\n      });\n    } catch {\n      this.logger.warn('Failed to generate package-lock.json — deploy will fall back to npm install');\n    } finally {\n      // Restore node_modules so runtime resolution works\n      if (movedNodeModules) {\n        await rm(nodeModules, { recursive: true, force: true });\n        await fsExtra.move(nodeModulesTmp, nodeModules, { overwrite: true });\n      }\n    }\n  }\n\n  protected async copyPublic(mastraDir: string, outputDirectory: string) {\n    const publicDir = join(mastraDir, 'public');\n\n    try {\n      await stat(publicDir);\n    } catch {\n      return;\n    }\n\n    await copy(publicDir, join(outputDirectory, this.outputDir));\n  }\n\n  protected async copyDOTNPMRC({\n    rootDir = process.cwd(),\n    outputDirectory,\n  }: {\n    rootDir?: string;\n    outputDirectory: string;\n  }) {\n    const sourceDotNpmRcPath = join(rootDir, '.npmrc');\n    const targetDotNpmRcPath = join(outputDirectory, this.outputDir, '.npmrc');\n\n    try {\n      await stat(sourceDotNpmRcPath);\n      await copy(sourceDotNpmRcPath, targetDotNpmRcPath);\n    } catch {\n      return;\n    }\n  }\n\n  /**\n   * Writes the `mastra-project.json` deployment marker for Software Factory\n   * projects after public assets have been copied. Verifies that the Factory\n   * SPA (`factory/index.html`) exists in the output before emitting the marker.\n   */\n  protected async writeFactoryMarker(outputDirectory: string): Promise<void> {\n    const outputDir = join(outputDirectory, this.outputDir);\n    const factoryIndex = join(outputDir, 'factory', 'index.html');\n    if (!existsSync(factoryIndex)) {\n      throw new MastraError({\n        id: 'DEPLOYER_BUNDLER_FACTORY_UI_MISSING',\n        text: 'Software Factory project detected but factory/index.html was not found after copying the prebuilt Factory UI.',\n        domain: ErrorDomain.DEPLOYER,\n        category: ErrorCategory.SYSTEM,\n      });\n    }\n    await writeFile(\n      join(outputDir, 'mastra-project.json'),\n      JSON.stringify({ schemaVersion: 1, projectType: 'factory', assets: { ui: 'factory' } }, null, 2),\n    );\n    this.logger.info('Wrote mastra-project.json for Software Factory project');\n  }\n\n  protected async getBundlerOptions(\n    serverFile: string,\n    mastraEntryFile: string,\n    analyzedBundleInfo: Awaited<ReturnType<typeof analyzeBundle>>,\n    toolsPaths: (string | string[])[],\n    { enableSourcemap, enableMinify, enableEsmShim, externals }: BundlerOptions,\n    additionalEntries: Record<string, string>,\n  ) {\n    const { workspaceRoot } = await getWorkspaceInformation({ mastraEntryFile });\n    const closestPkgJson = pkg.up({ cwd: dirname(mastraEntryFile) });\n    const projectRoot = closestPkgJson ? dirname(closestPkgJson) : process.cwd();\n\n    const inputOptions: InputOptions = await getInputOptions(\n      mastraEntryFile,\n      analyzedBundleInfo,\n      this.platform,\n      {\n        'process.env.NODE_ENV': JSON.stringify('production'),\n      },\n      {\n        sourcemap: enableSourcemap,\n        minify: enableMinify,\n        workspaceRoot,\n        projectRoot,\n        enableEsmShim,\n        externalsPreset: externals === true,\n      },\n    );\n    const toolsInputOptions = await this.listToolsInputOptions(toolsPaths);\n    const entryInputs: Record<string, string> = {};\n    const virtualEntries: Record<string, string> = {};\n    const entries = { index: serverFile, ...additionalEntries };\n\n    for (const [name, entry] of Object.entries(entries)) {\n      if (entry.includes('\\n') || !existsSync(entry)) {\n        const virtualId = name === 'index' ? '#entry' : `#entry-${name}`;\n        entryInputs[name] = virtualId;\n        virtualEntries[virtualId] = entry;\n      } else {\n        entryInputs[name] = entry;\n      }\n    }\n\n    inputOptions.input = { ...entryInputs, ...toolsInputOptions };\n\n    if (Object.keys(virtualEntries).length > 0) {\n      if (Array.isArray(inputOptions.plugins)) {\n        inputOptions.plugins.unshift(virtual(virtualEntries));\n      } else {\n        inputOptions.plugins = [virtual(virtualEntries)];\n      }\n    }\n\n    return inputOptions;\n  }\n\n  getAllToolPaths(mastraDir: string, toolsPaths: (string | string[])[] = []): (string | string[])[] {\n    // Normalize Windows paths to forward slashes for consistent handling\n    const normalizedMastraDir = slash(mastraDir);\n\n    // Prepare default tools paths with glob patterns\n    const defaultToolsPath = posix.join(normalizedMastraDir, 'tools/**/*.{js,ts}');\n    const defaultToolsIgnorePaths = [\n      `!${posix.join(normalizedMastraDir, 'tools/**/*.{test,spec}.{js,ts}')}`,\n      `!${posix.join(normalizedMastraDir, 'tools/**/__tests__/**')}`,\n    ];\n\n    // Combine default path with ignore patterns\n    const defaultPaths = [defaultToolsPath, ...defaultToolsIgnorePaths];\n\n    // If no tools paths provided, use only the default paths\n    if (toolsPaths.length === 0) {\n      return [defaultPaths];\n    }\n\n    // If tools paths are provided, add the default paths to ensure standard tools are always included\n    return [...toolsPaths, defaultPaths];\n  }\n\n  async listToolsInputOptions(toolsPaths: (string | string[])[]) {\n    const inputs: Record<string, string> = {};\n\n    for (const toolPath of toolsPaths) {\n      const expandedPaths = await glob(toolPath, {\n        absolute: true,\n        expandDirectories: false,\n      });\n\n      for (const path of expandedPaths) {\n        if (await fsExtra.pathExists(path)) {\n          const fileService = new FileService();\n          const entryFile = fileService.getFirstExistingFile([\n            join(path, 'index.ts'),\n            join(path, 'index.js'),\n            path, // if path itself is a file\n          ]);\n\n          // if it doesn't exist or is a dir skip it. using a dir as a tool will crash the process\n          if (!entryFile || (await stat(entryFile)).isDirectory()) {\n            this.logger.warn('No entry file found, skipping', { path });\n            continue;\n          }\n\n          const uniqueToolID = crypto.randomUUID();\n          // Normalize Windows paths to forward slashes for consistent handling\n          const normalizedEntryFile = entryFile.replaceAll('\\\\', '/');\n          inputs[`tools/${uniqueToolID}`] = normalizedEntryFile;\n        } else {\n          this.logger.warn('Tool path does not exist, skipping', { path });\n        }\n      }\n    }\n\n    return inputs;\n  }\n\n  protected async _bundle(\n    serverFile: string,\n    mastraEntryFile: string,\n    {\n      projectRoot,\n      outputDirectory,\n      enableEsmShim = true,\n    }: {\n      projectRoot: string;\n      outputDirectory: string;\n      enableEsmShim?: boolean;\n    },\n    toolsPaths: (string | string[])[] = [],\n    bundleLocation: string = join(outputDirectory, this.outputDir),\n  ): Promise<void> {\n    const analyzeDir = join(outputDirectory, this.analyzeOutputDir);\n    const additionalEntries = this.getAdditionalEntries();\n\n    const bundlerOptions = await this.getUserBundlerOptions(mastraEntryFile, outputDirectory);\n    const internalBundlerOptions: BundlerOptions = {\n      enableSourcemap: !!bundlerOptions.sourcemap,\n      enableMinify: !!bundlerOptions.minify,\n      externals: bundlerOptions.externals ?? [],\n      enableEsmShim,\n      dynamicPackages: bundlerOptions.dynamicPackages,\n    };\n\n    let analyzedBundleInfo;\n    try {\n      const resolvedToolsPaths = await this.listToolsInputOptions(toolsPaths);\n      analyzedBundleInfo = await analyzeBundle(\n        [serverFile, ...Object.values(additionalEntries), ...Object.values(resolvedToolsPaths)],\n        mastraEntryFile,\n        {\n          outputDir: analyzeDir,\n          projectRoot,\n          platform: this.platform,\n          bundlerOptions: internalBundlerOptions,\n        },\n        this.logger,\n      );\n    } catch (error) {\n      const message = error instanceof Error ? error.message : String(error);\n\n      if (error instanceof MastraError) {\n        throw error;\n      }\n\n      throw new MastraError(\n        {\n          id: 'DEPLOYER_BUNDLER_ANALYZE_FAILED',\n          text: `Failed to analyze Mastra application: ${message}`,\n          domain: ErrorDomain.DEPLOYER,\n          category: ErrorCategory.SYSTEM,\n        },\n        error,\n      );\n    }\n\n    const { workspaceRoot } = await getWorkspaceInformation({ dir: projectRoot, mastraEntryFile });\n    const sourceDependencyConstraints = await getSourceDependencyConstraints({\n      projectRoot,\n      mastraEntryFile,\n      workspaceRoot,\n    });\n    const dependenciesToInstall = new Map<string, ExternalDependencyInfo>();\n    for (const [dep, depInfo] of analyzedBundleInfo.externalDependencies) {\n      if (analyzedBundleInfo.workspaceMap.has(dep) || !isBareModuleSpecifier(dep)) {\n        continue;\n      }\n\n      dependenciesToInstall.set(dep, applySourceDependencyRange(dep, depInfo, sourceDependencyConstraints));\n    }\n\n    const initialWorkspaceDependencies = new Set<string>();\n    for (const dep of analyzedBundleInfo.dependencies.keys()) {\n      const pkgName = getPackageName(dep);\n      if (pkgName && analyzedBundleInfo.workspaceMap.has(pkgName)) {\n        initialWorkspaceDependencies.add(pkgName);\n      }\n    }\n\n    const transitiveWorkspaceDependencies = collectTransitiveWorkspaceDependencies({\n      workspaceMap: analyzedBundleInfo.workspaceMap,\n      initialDependencies: initialWorkspaceDependencies,\n      logger: this.logger,\n    });\n\n    for (const [dep, packageSpec] of Object.entries(transitiveWorkspaceDependencies.resolutions)) {\n      dependenciesToInstall.set(dep, {\n        version: analyzedBundleInfo.workspaceMap.get(dep)?.version,\n        packageSpec,\n      });\n    }\n\n    try {\n      await this.writePackageJson(\n        join(outputDirectory, this.outputDir),\n        dependenciesToInstall,\n        transitiveWorkspaceDependencies.resolutions,\n      );\n      if (transitiveWorkspaceDependencies.usedWorkspacePackages.size > 0) {\n        await packWorkspaceDependencies({\n          workspaceMap: analyzedBundleInfo.workspaceMap,\n          usedWorkspacePackages: transitiveWorkspaceDependencies.usedWorkspacePackages,\n          bundleOutputDir: join(outputDirectory, this.outputDir),\n          logger: this.logger,\n        });\n      }\n\n      this.logger.info('Bundling Mastra application');\n\n      const inputOptions: InputOptions = await this.getBundlerOptions(\n        serverFile,\n        mastraEntryFile,\n        analyzedBundleInfo,\n        toolsPaths,\n        internalBundlerOptions,\n        additionalEntries,\n      );\n\n      const bundler = await this.createBundler(\n        {\n          ...inputOptions,\n          logLevel: inputOptions.logLevel === 'silent' ? 'warn' : inputOptions.logLevel,\n          onwarn: warning => {\n            if (warning.code === 'CIRCULAR_DEPENDENCY') {\n              if (warning.ids?.[0]?.includes('node_modules')) {\n                return;\n              }\n\n              this.logger.warn('Circular dependency found', {\n                dependency: warning.message.replace('Circular dependency: ', ''),\n              });\n            }\n          },\n        },\n        {\n          dir: bundleLocation,\n          manualChunks: {\n            mastra: ['#mastra'],\n          },\n          sourcemap: internalBundlerOptions.enableSourcemap,\n        },\n      );\n\n      await bundler.write();\n      const toolImports: string[] = [];\n      const toolsExports: string[] = [];\n      Array.from(Object.keys(inputOptions.input || {}))\n        .filter(key => key.startsWith('tools/'))\n        .forEach((key, index) => {\n          const toolExport = `tool${index}`;\n          toolImports.push(`import * as ${toolExport} from './${key}.mjs';`);\n          toolsExports.push(toolExport);\n        });\n\n      await writeFile(\n        join(bundleLocation, 'tools.mjs'),\n        `${toolImports.join('\\n')}\n\nexport const tools = [${toolsExports.join(', ')}]`,\n      );\n      this.logger.info('Bundling Mastra done');\n\n      this.logger.info('Copying public files');\n      await this.copyPublic(dirname(mastraEntryFile), outputDirectory);\n      this.logger.info('Done copying public files');\n\n      // For Software Factory projects, write a deterministic deployment marker\n      // after public assets (including the SPA) have been copied.\n      if (analyzedBundleInfo.projectType === 'factory') {\n        await this.writeFactoryMarker(outputDirectory);\n      }\n\n      this.logger.info('Copying .npmrc file');\n      await this.copyDOTNPMRC({ outputDirectory, rootDir: projectRoot });\n\n      this.logger.info('Done copying .npmrc file');\n\n      if (shouldSkipInstall()) {\n        this.logger.info('Skipping dependency installation (MASTRA_BUILD_SKIP_INSTALL set)');\n      } else {\n        this.logger.info('Installing dependencies');\n        await this.installDependencies(outputDirectory, projectRoot, transitiveWorkspaceDependencies.resolutions);\n        this.logger.info('Done installing dependencies');\n\n        if (Object.keys(transitiveWorkspaceDependencies.resolutions).length === 0) {\n          this.logger.info('Generating package-lock.json for deploy');\n          await this.generateNpmLockfile(join(outputDirectory, this.outputDir));\n          this.logger.info('Done generating package-lock.json');\n        } else {\n          this.logger.warn(\n            'Skipping package-lock.json generation because the output contains packed workspace dependencies',\n          );\n        }\n      }\n    } catch (error) {\n      if (\n        error instanceof MastraError &&\n        (error.id === 'DEPLOYER_BUNDLER_FACTORY_UI_MISSING' || error.id === 'DEPLOYER_PNPM_IGNORED_BUILDS')\n      ) {\n        throw error;\n      }\n\n      const message = error instanceof Error ? error.message : String(error);\n      throw new MastraError(\n        {\n          id: 'DEPLOYER_BUNDLER_BUNDLE_STAGE_FAILED',\n          text: `Failed during bundler bundle stage: ${message}`,\n          domain: ErrorDomain.DEPLOYER,\n          category: ErrorCategory.SYSTEM,\n        },\n        error,\n      );\n    }\n  }\n\n  async lint(_entryFile: string, _outputDirectory: string, toolsPaths: (string | string[])[]): Promise<void> {\n    const toolsInputOptions = await this.listToolsInputOptions(toolsPaths);\n    const toolsLength = Object.keys(toolsInputOptions).length;\n    if (toolsLength > 0) {\n      this.logger.info('Found tools', { count: toolsLength });\n    }\n  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Protocols need `:`, git shorthand needs `/` or `#`. */\nconst REGISTRY_SPEC_PATTERN = /^[A-Za-z0-9.+_^~><=*|!\\s-]+$/;\nconst PACKAGE_NAME_PATTERN = /^(?:@[A-Za-z0-9._-]+\\/)?[A-Za-z0-9._-]+$/;\nconst TARBALL_SUFFIX_PATTERN = /\\.(?:tgz|tar\\.gz|tar)$/i;\n/** npm reads a value starting like this as a path, whatever follows. A bare `~` is a semver range. */\nconst FILE_SPEC_PREFIX_PATTERN = /^(?:\\.|~[/\\\\]|[/\\\\]|[A-Za-z]:[/\\\\])/;\n/** A range admitting any published version: `*`, `x`, `>=0`, and any union containing one. */\nconst UNBOUNDED_RANGE_PATTERN = /(?:^|\\|\\||\\s)\\s*(?:[*xX]|>=?\\s*0(?:\\.0)*(?:\\.0)*)\\s*(?:$|\\|\\|)/;\n\n/**\n * Constraints declared by the source app, plus the packages some resolution field pins.\n *\n * Only `dependencies` values are read. Override fields contribute names, never values: which of\n * `overrides`, `resolutions`, `pnpm.overrides` or `pnpm-workspace.yaml` a given install honoured\n * depends on the package manager and its version, so reproducing that precedence would mean\n * emulating three package managers. A name appearing in any of them is enough to know the resolved\n * version was chosen deliberately, which is all this needs.\n */\nexport type SourceDependencyConstraints = {\n  dependencies: Record<string, string>;\n  pinnedByResolutionField: Set<string>;\n};\n\nconst toStringRecord = (value: unknown): Record<string, string> => {\n  if (!value || typeof value !== 'object' || Array.isArray(value)) {\n    return {};\n  }\n\n  return Object.fromEntries(\n    Object.entries(value).filter((entry): entry is [string, string] => typeof entry[1] === 'string'),\n  );\n};\n\n/**\n * True when a specifier is something the isolated install in `.mastra/output` can resolve from the\n * registry: a semver range, a dist tag, a wildcard, or an npm alias whose target is a registry\n * package and range.\n *\n * This is an allowlist rather than a denylist of known protocols, so an unfamiliar protocol is\n * rejected without this code having to know it exists. The output directory is not a workspace, has\n * no catalog definitions and has a different relative-path base, so `catalog:`, `workspace:`,\n * `file:`, `link:` and git specifiers are all either uninstallable there or point somewhere else.\n */\nexport const isRegistryVersionSpec = (spec: string): boolean => {\n  if (FILE_SPEC_PREFIX_PATTERN.test(spec) || TARBALL_SUFFIX_PATTERN.test(spec)) {\n    return false;\n  }\n\n  if (spec.startsWith(NPM_ALIAS_PREFIX)) {\n    const alias = spec.slice(NPM_ALIAS_PREFIX.length);\n    // Skip index 0 so `npm:@scope/pkg` reads as an alias with no range rather than an empty name.\n    const rangeSeparator = alias.lastIndexOf('@');\n    const name = rangeSeparator > 0 ? alias.slice(0, rangeSeparator) : alias;\n    const range = rangeSeparator > 0 ? alias.slice(rangeSeparator + 1) : '*';\n\n    return PACKAGE_NAME_PATTERN.test(name) && isRegistryVersionSpec(range);\n  }\n\n  return REGISTRY_SPEC_PATTERN.test(spec);\n};\n\n/**\n * True when a specifier names a version the output install can be held to.\n *\n * A range admitting anything (`*`, `latest`, `>=0`, an alias with no range) is looser than the\n * version already resolved, so writing it would let a later install pull something the bundle was\n * never analyzed against.\n */\nconst isBoundedVersionSpec = (spec: string): boolean => {\n  const range = spec.startsWith(NPM_ALIAS_PREFIX)\n    ? 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(pnpmSection as { overrides?: unknown }).overrides : undefined,\n  ];\n\n  for (const record of records) {\n    if (record && typeof record === 'object' && !Array.isArray(record)) {\n      for (const key of Object.keys(record)) {\n        pinned.add(key);\n      }\n    }\n  }\n};\n\n/**\n * Collect the names under a top-level `overrides:` block in `pnpm-workspace.yaml`.\n *\n * pnpm moved overrides out of `package.json` into this file, so a workspace on a current pnpm keeps\n * them only here. Reading names off the indented block avoids a YAML dependency, the same tradeoff\n * `copyPnpmWorkspaceSettings` already makes for the top-level keys it copies.\n */\nconst collectPnpmWorkspacePinnedNames = (source: string, pinned: Set<string>) => {\n  const lines = source.split(/\\r?\\n/);\n  let insideOverrides = false;\n\n  for (const line of lines) {\n    if (/^\\S/.test(line)) {\n      insideOverrides = /^overrides:\\s*$/.test(line);\n      continue;\n    }\n\n    if (!insideOverrides) {\n      continue;\n    }\n\n    const key = /^\\s+(?:'([^']+)'|\"([^\"]+)\"|([^'\"\\s:][^:]*?))\\s*:/.exec(line);\n    if (key) {\n      pinned.add((key[1] ?? key[2] ?? key[3] ?? '').trim());\n    }\n  }\n};\n\n/**\n * Read the constraints the source app declared.\n *\n * `dependencies` come from the manifest at `projectRoot`, the package the build was invoked for and\n * whose directory receives the output, falling back to the manifest above the entry file. Anchoring\n * on `projectRoot` rather than the entry file keeps the answer deterministic when the entry handed\n * to the bundler is a generated wrapper rather than the app's own source file.\n *\n * Resolution-field names are collected from both that manifest and the workspace root, including the\n * root `pnpm-workspace.yaml`, because a name pinned anywhere means the resolved version may have been\n * chosen deliberately rather than hoisted by accident.\n */\nexport const getSourceDependencyConstraints = async ({\n  projectRoot,\n  mastraEntryFile,\n  workspaceRoot,\n}: {\n  projectRoot: string;\n  mastraEntryFile: string;\n  workspaceRoot?: string;\n}): Promise<SourceDependencyConstraints> => {\n  const manifestPaths = [pkg.up({ cwd: projectRoot }), pkg.up({ cwd: dirname(mastraEntryFile) })].filter(\n    (entry, index, entries): entry is string => !!entry && entries.indexOf(entry) === index,\n  );\n\n  if (workspaceRoot) {\n    manifestPaths.push(join(workspaceRoot, 'package.json'));\n  }\n\n  const pinnedByResolutionField = new Set<string>();\n  let dependencies: Record<string, string> | undefined;\n\n  for (const manifestPath of manifestPaths) {\n    const manifest = await readManifest(manifestPath);\n    if (!manifest) {\n      continue;\n    }\n\n    // Nearest manifest wins, and an empty `dependencies` record is still that package's answer.\n    dependencies ??= toStringRecord(manifest.dependencies);\n    collectManifestPinnedNames(manifest, pinnedByResolutionField);\n  }\n\n  if (workspaceRoot) {\n    try {\n      collectPnpmWorkspacePinnedNames(\n        await readFile(join(workspaceRoot, 'pnpm-workspace.yaml'), 'utf-8'),\n        pinnedByResolutionField,\n      );\n    } catch {\n      // No pnpm workspace config, or unreadable: nothing to learn from it.\n    }\n  }\n\n  return { dependencies: dependencies ?? {}, pinnedByResolutionField };\n};\n\nconst findDeclaredConstraint = (\n  constraints: SourceDependencyConstraints,\n  dependencyName: string,\n): string | undefined => {\n  const names = [dependencyName, getPackageName(dependencyName)].filter(\n    (name, index, all): name is string => !!name && all.indexOf(name) === index,\n  );\n\n  for (const name of names) {\n    // A pinned package's resolved version is the deliberate answer, so leave it as `main` wrote it.\n    if (constraints.pinnedByResolutionField.has(name)) {\n      return undefined;\n    }\n  }\n\n  for (const name of names) {\n    const declared = (constraints.dependencies[name] ?? '').trim();\n    if (declared && isBoundedVersionSpec(declared) && isRegistryVersionSpec(declared)) {\n      return declared;\n    }\n  }\n\n  return undefined;\n};\n\n/**\n * Prefer the constraint the app declared over the version resolved from `node_modules`.\n *\n * The resolved version is whatever the install happened to hoist, so an app declaring `zod: ^4.3.6`\n * next to a hoisted `zod@3.25.76` gets the hoisted version written into the output manifest and the\n * isolated install then locks it in.\n */\nexport const applySourceDependencyRange = (\n  dependencyName: string,\n  dependencyInfo: ExternalDependencyInfo,\n  constraints: SourceDependencyConstraints,\n): ExternalDependencyInfo => {\n  const declared = findDeclaredConstraint(constraints, dependencyName);\n  if (!declared) {\n    return dependencyInfo;\n  }\n\n  if (declared.startsWith(NPM_ALIAS_PREFIX)) {\n    return { ...dependencyInfo, packageSpec: declared };\n  }\n\n  // `packageSpec` is set only when the resolved package's own name differs from the requested one, so\n  // a bare range under this key describes a different package and the resolved alias is the answer.\n  if (dependencyInfo.packageSpec) {\n    return dependencyInfo;\n  }\n\n  return { ...dependencyInfo, version: declared };\n};\n\nfunction toolIdForEntry(relativeEntryFile: string): string {\n  const digest = createHash('sha256').update(relativeEntryFile).digest('hex');\n  return `${digest.slice(0, 8)}-${digest.slice(8, 12)}-${digest.slice(12, 16)}-${digest.slice(16, 20)}-${digest.slice(20, 32)}`;\n}\n\nexport abstract class Bundler extends MastraBundler {\n  protected analyzeOutputDir = '.build';\n  protected outputDir = 'output';\n  protected platform: BundlerPlatform = 'node';\n\n  constructor(name: string, component: 'BUNDLER' | 'DEPLOYER' = 'BUNDLER') {\n    super({ name, component });\n  }\n\n  async prepare(outputDirectory: string): Promise<void> {\n    // Clean up the output directory first\n    await emptyDir(outputDirectory);\n\n    await ensureDir(join(outputDirectory, this.analyzeOutputDir));\n    await ensureDir(join(outputDirectory, this.outputDir));\n  }\n\n  async writePackageJson(\n    outputDirectory: string,\n    dependencies: Map<string, string | ExternalDependencyInfo>,\n    resolutions?: Record<string, string>,\n  ) {\n    this.logger.debug(\"Writing project's package.json\");\n\n    await ensureDir(outputDirectory);\n    const pkgPath = join(outputDirectory, 'package.json');\n\n    const dependenciesMap = new Map();\n    for (const [key, value] of dependencies.entries()) {\n      const dependencyValue = typeof value === 'string' ? value : (value.packageSpec ?? value.version ?? 'latest');\n      if (key.startsWith('@')) {\n        // Handle scoped packages (e.g. @org/package)\n        const pkgChunks = key.split('/');\n        dependenciesMap.set(`${pkgChunks[0]}/${pkgChunks[1]}`, dependencyValue);\n      } else {\n        // For non-scoped packages, take only the first part before any slash\n        const pkgName = key.split('/')[0] || key;\n        dependenciesMap.set(pkgName, dependencyValue);\n      }\n    }\n\n    await writeFile(\n      pkgPath,\n      JSON.stringify(\n        {\n          name: 'server',\n          version: '1.0.0',\n          private: true,\n          type: 'module',\n          main: 'index.mjs',\n          scripts: {\n            start: 'node ./index.mjs',\n          },\n          dependencies: Object.fromEntries(dependenciesMap.entries()),\n          ...(Object.keys(resolutions ?? {}).length > 0 && { resolutions }),\n        },\n        null,\n        2,\n      ),\n    );\n  }\n\n  protected createBundler(inputOptions: InputOptions, outputOptions: Partial<OutputOptions> & { dir: string }) {\n    return createBundlerUtil(inputOptions, outputOptions);\n  }\n\n  protected async getUserBundlerOptions(\n    mastraEntryFile: string,\n    outputDirectory: string,\n  ): Promise<NonNullable<Config['bundler']>> {\n    const defaultBundlerOptions: Config['bundler'] = {\n      externals: [],\n      sourcemap: false,\n      transpilePackages: [],\n      [IS_DEFAULT]: true,\n    } as const;\n\n    try {\n      const bundlerOptions = await getBundlerOptions(mastraEntryFile, outputDirectory);\n\n      return bundlerOptions ?? defaultBundlerOptions;\n    } catch (error) {\n      this.logger.debug('Failed to get bundler options, sourcemap will be disabled', { error });\n    }\n\n    return defaultBundlerOptions;\n  }\n\n  protected async analyze(entry: string | string[], mastraFile: string, outputDirectory: string) {\n    return await analyzeBundle(\n      ([] as string[]).concat(entry),\n      mastraFile,\n      {\n        outputDir: join(outputDirectory, this.analyzeOutputDir),\n        projectRoot: outputDirectory,\n        platform: this.platform,\n      },\n      this.logger,\n    );\n  }\n\n  protected pnpmNodeLinker?: 'hoisted';\n\n  protected getAdditionalEntries(): Record<string, string> {\n    return {};\n  }\n\n  protected async installDependencies(\n    outputDirectory: string,\n    rootDir = process.cwd(),\n    pnpmOverrides?: Record<string, string>,\n  ) {\n    const deps = new DepsService(rootDir);\n    deps.__setLogger(this.logger);\n\n    await deps.install({\n      dir: join(outputDirectory, this.outputDir),\n      pnpmOverrides,\n      pnpmNodeLinker: this.pnpmNodeLinker,\n    });\n  }\n\n  /**\n   * Generate a package-lock.json for the output directory so that deploy targets\n   * can use `npm ci` instead of `npm install`, skipping version resolution entirely.\n   * This is a lockfile-only operation — no packages are downloaded.\n   *\n   * Temporarily moves node_modules out of the way because pnpm's symlink-based\n   * layout confuses npm's arborist, then restores it afterwards so that\n   * `mastra start` (or wrangler) can still resolve dependencies at runtime.\n   */\n  private async generateNpmLockfile(outputDir: string): Promise<void> {\n    const nodeModules = join(outputDir, 'node_modules');\n    const nodeModulesTmp = join(outputDir, 'node_modules.__tmp');\n    let movedNodeModules = false;\n    try {\n      // Move node_modules aside — pnpm's symlink layout confuses npm's arborist\n      if (await fsExtra.pathExists(nodeModules)) {\n        await fsExtra.move(nodeModules, nodeModulesTmp, { overwrite: true });\n        movedNodeModules = true;\n      }\n      execSync('npm install --package-lock-only --force', {\n        cwd: outputDir,\n        stdio: 'pipe',\n        timeout: 60_000,\n      });\n    } catch {\n      this.logger.warn('Failed to generate package-lock.json — deploy will fall back to npm install');\n    } finally {\n      // Restore node_modules so runtime resolution works\n      if (movedNodeModules) {\n        await rm(nodeModules, { recursive: true, force: true });\n        await fsExtra.move(nodeModulesTmp, nodeModules, { overwrite: true });\n      }\n    }\n  }\n\n  protected async copyPublic(mastraDir: string, outputDirectory: string) {\n    const publicDir = join(mastraDir, 'public');\n\n    try {\n      await stat(publicDir);\n    } catch {\n      return;\n    }\n\n    await copy(publicDir, join(outputDirectory, this.outputDir));\n  }\n\n  protected async copyDOTNPMRC({\n    rootDir = process.cwd(),\n    outputDirectory,\n  }: {\n    rootDir?: string;\n    outputDirectory: string;\n  }) {\n    const sourceDotNpmRcPath = join(rootDir, '.npmrc');\n    const targetDotNpmRcPath = join(outputDirectory, this.outputDir, '.npmrc');\n\n    try {\n      await stat(sourceDotNpmRcPath);\n      await copy(sourceDotNpmRcPath, targetDotNpmRcPath);\n    } catch {\n      return;\n    }\n  }\n\n  /**\n   * Writes the `mastra-project.json` deployment marker for Software Factory\n   * projects after public assets have been copied. Verifies that the Factory\n   * SPA (`factory/index.html`) exists in the output before emitting the marker.\n   */\n  protected async writeFactoryMarker(outputDirectory: string): Promise<void> {\n    const outputDir = join(outputDirectory, this.outputDir);\n    const factoryIndex = join(outputDir, 'factory', 'index.html');\n    if (!existsSync(factoryIndex)) {\n      throw new MastraError({\n        id: 'DEPLOYER_BUNDLER_FACTORY_UI_MISSING',\n        text: 'Software Factory project detected but factory/index.html was not found after copying the prebuilt Factory UI.',\n        domain: ErrorDomain.DEPLOYER,\n        category: ErrorCategory.SYSTEM,\n      });\n    }\n    await writeFile(\n      join(outputDir, 'mastra-project.json'),\n      JSON.stringify({ schemaVersion: 1, projectType: 'factory', assets: { ui: 'factory' } }, null, 2),\n    );\n    this.logger.info('Wrote mastra-project.json for Software Factory project');\n  }\n\n  protected async getBundlerOptions(\n    serverFile: string,\n    mastraEntryFile: string,\n    analyzedBundleInfo: Awaited<ReturnType<typeof analyzeBundle>>,\n    toolsPaths: (string | string[])[],\n    { enableSourcemap, enableMinify, enableEsmShim, externals }: BundlerOptions,\n    additionalEntries: Record<string, string>,\n    toolProjectRoot: string,\n  ) {\n    const { workspaceRoot } = await getWorkspaceInformation({ mastraEntryFile });\n    const closestPkgJson = pkg.up({ cwd: dirname(mastraEntryFile) });\n    const projectRoot = closestPkgJson ? dirname(closestPkgJson) : process.cwd();\n\n    const inputOptions: InputOptions = await getInputOptions(\n      mastraEntryFile,\n      analyzedBundleInfo,\n      this.platform,\n      {\n        'process.env.NODE_ENV': JSON.stringify('production'),\n      },\n      {\n        sourcemap: enableSourcemap,\n        minify: enableMinify,\n        workspaceRoot,\n        projectRoot,\n        enableEsmShim,\n        externalsPreset: externals === true,\n      },\n    );\n    const toolsInputOptions = await this.listToolsInputOptions(toolsPaths, toolProjectRoot);\n    const entryInputs: Record<string, string> = {};\n    const virtualEntries: Record<string, string> = {};\n    const entries = { index: serverFile, ...additionalEntries };\n\n    for (const [name, entry] of Object.entries(entries)) {\n      if (entry.includes('\\n') || !existsSync(entry)) {\n        const virtualId = name === 'index' ? '#entry' : `#entry-${name}`;\n        entryInputs[name] = virtualId;\n        virtualEntries[virtualId] = entry;\n      } else {\n        entryInputs[name] = entry;\n      }\n    }\n\n    inputOptions.input = { ...entryInputs, ...toolsInputOptions };\n\n    if (Object.keys(virtualEntries).length > 0) {\n      if (Array.isArray(inputOptions.plugins)) {\n        inputOptions.plugins.unshift(virtual(virtualEntries));\n      } else {\n        inputOptions.plugins = [virtual(virtualEntries)];\n      }\n    }\n\n    return inputOptions;\n  }\n\n  getAllToolPaths(mastraDir: string, toolsPaths: (string | string[])[] = []): (string | string[])[] {\n    // Normalize Windows paths to forward slashes for consistent handling\n    const normalizedMastraDir = slash(mastraDir);\n\n    // Prepare default tools paths with glob patterns\n    const defaultToolsPath = posix.join(normalizedMastraDir, 'tools/**/*.{js,ts}');\n    const defaultToolsIgnorePaths = [\n      `!${posix.join(normalizedMastraDir, 'tools/**/*.{test,spec}.{js,ts}')}`,\n      `!${posix.join(normalizedMastraDir, 'tools/**/__tests__/**')}`,\n    ];\n\n    // Combine default path with ignore patterns\n    const defaultPaths = [defaultToolsPath, ...defaultToolsIgnorePaths];\n\n    // If no tools paths provided, use only the default paths\n    if (toolsPaths.length === 0) {\n      return [defaultPaths];\n    }\n\n    // If tools paths are provided, add the default paths to ensure standard tools are always included\n    return [...toolsPaths, defaultPaths];\n  }\n\n  async listToolsInputOptions(toolsPaths: (string | string[])[], projectRoot: string = process.cwd()) {\n    const entries = new Map<string, string>();\n\n    for (const toolPath of toolsPaths) {\n      const expandedPaths = await glob(toolPath, {\n        absolute: true,\n        expandDirectories: false,\n      });\n\n      for (const path of expandedPaths) {\n        if (await fsExtra.pathExists(path)) {\n          const fileService = new FileService();\n          const entryFile = fileService.getFirstExistingFile([\n            join(path, 'index.ts'),\n            join(path, 'index.js'),\n            path, // if path itself is a file\n          ]);\n\n          // if it doesn't exist or is a dir skip it. using a dir as a tool will crash the process\n          if (!entryFile || (await stat(entryFile)).isDirectory()) {\n            this.logger.warn('No entry file found, skipping', { path });\n            continue;\n          }\n\n          const normalizedEntryFile = entryFile.replaceAll('\\\\', '/');\n          const relativeEntryFile = relative(projectRoot, entryFile).replaceAll('\\\\', '/');\n          entries.set(relativeEntryFile, normalizedEntryFile);\n        } else {\n          this.logger.warn('Tool path does not exist, skipping', { path });\n        }\n      }\n    }\n\n    return Object.fromEntries(\n      [...entries.entries()]\n        .sort(([first], [second]) => (first < second ? -1 : first > second ? 1 : 0))\n        .map(([relativeEntryFile, entryFile]) => [`tools/${toolIdForEntry(relativeEntryFile)}`, entryFile]),\n    );\n  }\n\n  protected async _bundle(\n    serverFile: string,\n    mastraEntryFile: string,\n    {\n      projectRoot,\n      outputDirectory,\n      enableEsmShim = true,\n    }: {\n      projectRoot: string;\n      outputDirectory: string;\n      enableEsmShim?: boolean;\n    },\n    toolsPaths: (string | string[])[] = [],\n    bundleLocation: string = join(outputDirectory, this.outputDir),\n  ): Promise<void> {\n    const analyzeDir = join(outputDirectory, this.analyzeOutputDir);\n    const additionalEntries = this.getAdditionalEntries();\n\n    const bundlerOptions = await this.getUserBundlerOptions(mastraEntryFile, outputDirectory);\n    const internalBundlerOptions: BundlerOptions = {\n      enableSourcemap: !!bundlerOptions.sourcemap,\n      enableMinify: !!bundlerOptions.minify,\n      externals: bundlerOptions.externals ?? [],\n      enableEsmShim,\n      dynamicPackages: bundlerOptions.dynamicPackages,\n    };\n\n    let analyzedBundleInfo;\n    try {\n      const resolvedToolsPaths = await this.listToolsInputOptions(toolsPaths, projectRoot);\n      analyzedBundleInfo = await analyzeBundle(\n        [serverFile, ...Object.values(additionalEntries), ...Object.values(resolvedToolsPaths)],\n        mastraEntryFile,\n        {\n          outputDir: analyzeDir,\n          projectRoot,\n          platform: this.platform,\n          bundlerOptions: internalBundlerOptions,\n        },\n        this.logger,\n      );\n    } catch (error) {\n      const message = error instanceof Error ? error.message : String(error);\n\n      if (error instanceof MastraError) {\n        throw error;\n      }\n\n      throw new MastraError(\n        {\n          id: 'DEPLOYER_BUNDLER_ANALYZE_FAILED',\n          text: `Failed to analyze Mastra application: ${message}`,\n          domain: ErrorDomain.DEPLOYER,\n          category: ErrorCategory.SYSTEM,\n        },\n        error,\n      );\n    }\n\n    const { workspaceRoot } = await getWorkspaceInformation({ dir: projectRoot, mastraEntryFile });\n    const sourceDependencyConstraints = await getSourceDependencyConstraints({\n      projectRoot,\n      mastraEntryFile,\n      workspaceRoot,\n    });\n    const dependenciesToInstall = new Map<string, ExternalDependencyInfo>();\n    for (const [dep, depInfo] of analyzedBundleInfo.externalDependencies) {\n      if (analyzedBundleInfo.workspaceMap.has(dep) || !isBareModuleSpecifier(dep)) {\n        continue;\n      }\n\n      dependenciesToInstall.set(dep, applySourceDependencyRange(dep, depInfo, sourceDependencyConstraints));\n    }\n\n    const initialWorkspaceDependencies = new Set<string>();\n    for (const dep of analyzedBundleInfo.dependencies.keys()) {\n      const pkgName = getPackageName(dep);\n      if (pkgName && analyzedBundleInfo.workspaceMap.has(pkgName)) {\n        initialWorkspaceDependencies.add(pkgName);\n      }\n    }\n\n    const transitiveWorkspaceDependencies = collectTransitiveWorkspaceDependencies({\n      workspaceMap: analyzedBundleInfo.workspaceMap,\n      initialDependencies: initialWorkspaceDependencies,\n      logger: this.logger,\n    });\n\n    for (const [dep, packageSpec] of Object.entries(transitiveWorkspaceDependencies.resolutions)) {\n      dependenciesToInstall.set(dep, {\n        version: analyzedBundleInfo.workspaceMap.get(dep)?.version,\n        packageSpec,\n      });\n    }\n\n    try {\n      await this.writePackageJson(\n        join(outputDirectory, this.outputDir),\n        dependenciesToInstall,\n        transitiveWorkspaceDependencies.resolutions,\n      );\n      if (transitiveWorkspaceDependencies.usedWorkspacePackages.size > 0) {\n        await packWorkspaceDependencies({\n          workspaceMap: analyzedBundleInfo.workspaceMap,\n          usedWorkspacePackages: transitiveWorkspaceDependencies.usedWorkspacePackages,\n          bundleOutputDir: join(outputDirectory, this.outputDir),\n          logger: this.logger,\n        });\n      }\n\n      this.logger.info('Bundling Mastra application');\n\n      const inputOptions: InputOptions = await this.getBundlerOptions(\n        serverFile,\n        mastraEntryFile,\n        analyzedBundleInfo,\n        toolsPaths,\n        internalBundlerOptions,\n        additionalEntries,\n        projectRoot,\n      );\n\n      const bundler = await this.createBundler(\n        {\n          ...inputOptions,\n          logLevel: inputOptions.logLevel === 'silent' ? 'warn' : inputOptions.logLevel,\n          onwarn: warning => {\n            if (warning.code === 'CIRCULAR_DEPENDENCY') {\n              if (warning.ids?.[0]?.includes('node_modules')) {\n                return;\n              }\n\n              this.logger.warn('Circular dependency found', {\n                dependency: warning.message.replace('Circular dependency: ', ''),\n              });\n            }\n          },\n        },\n        {\n          dir: bundleLocation,\n          manualChunks: {\n            mastra: ['#mastra'],\n          },\n          sourcemap: internalBundlerOptions.enableSourcemap,\n        },\n      );\n\n      await bundler.write();\n      const toolImports: string[] = [];\n      const toolsExports: string[] = [];\n      Array.from(Object.keys(inputOptions.input || {}))\n        .filter(key => key.startsWith('tools/'))\n        .forEach((key, index) => {\n          const toolExport = `tool${index}`;\n          toolImports.push(`import * as ${toolExport} from './${key}.mjs';`);\n          toolsExports.push(toolExport);\n        });\n\n      await writeFile(\n        join(bundleLocation, 'tools.mjs'),\n        `${toolImports.join('\\n')}\n\nexport const tools = [${toolsExports.join(', ')}]`,\n      );\n      this.logger.info('Bundling Mastra done');\n\n      this.logger.info('Copying public files');\n      await this.copyPublic(dirname(mastraEntryFile), outputDirectory);\n      this.logger.info('Done copying public files');\n\n      // For Software Factory projects, write a deterministic deployment marker\n      // after public assets (including the SPA) have been copied.\n      if (analyzedBundleInfo.projectType === 'factory') {\n        await this.writeFactoryMarker(outputDirectory);\n      }\n\n      this.logger.info('Copying .npmrc file');\n      await this.copyDOTNPMRC({ outputDirectory, rootDir: projectRoot });\n\n      this.logger.info('Done copying .npmrc file');\n\n      if (shouldSkipInstall()) {\n        this.logger.info('Skipping dependency installation (MASTRA_BUILD_SKIP_INSTALL set)');\n      } else {\n        this.logger.info('Installing dependencies');\n        await this.installDependencies(outputDirectory, projectRoot, transitiveWorkspaceDependencies.resolutions);\n        this.logger.info('Done installing dependencies');\n\n        if (Object.keys(transitiveWorkspaceDependencies.resolutions).length === 0) {\n          this.logger.info('Generating package-lock.json for deploy');\n          await this.generateNpmLockfile(join(outputDirectory, this.outputDir));\n          this.logger.info('Done generating package-lock.json');\n        } else {\n          this.logger.warn(\n            'Skipping package-lock.json generation because the output contains packed workspace dependencies',\n          );\n        }\n      }\n    } catch (error) {\n      if (\n        error instanceof MastraError &&\n        (error.id === 'DEPLOYER_BUNDLER_FACTORY_UI_MISSING' || error.id === 'DEPLOYER_PNPM_IGNORED_BUILDS')\n      ) {\n        throw error;\n      }\n\n      const message = error instanceof Error ? error.message : String(error);\n      throw new MastraError(\n        {\n          id: 'DEPLOYER_BUNDLER_BUNDLE_STAGE_FAILED',\n          text: `Failed during bundler bundle stage: ${message}`,\n          domain: ErrorDomain.DEPLOYER,\n          category: ErrorCategory.SYSTEM,\n        },\n        error,\n      );\n    }\n  }\n\n  async lint(_entryFile: string, outputDirectory: string, toolsPaths: (string | string[])[]): Promise<void> {\n    const toolsInputOptions = await this.listToolsInputOptions(toolsPaths, dirname(outputDirectory));\n    const toolsLength = Object.keys(toolsInputOptions).length;\n    if (toolsLength > 0) {\n      this.logger.info('Found tools', { count: toolsLength });\n    }\n  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package/dist/bundler/index.d.ts

@@ -103,14 +103,16 @@ export declare abstract class Bundler extends MastraBundler {
      * SPA (`factory/index.html`) exists in the output before emitting the marker.
      */
     protected writeFactoryMarker(outputDirectory: string): Promise<void>;
-    protected getBundlerOptions(serverFile: string, mastraEntryFile: string, analyzedBundleInfo: Awaited<ReturnType<typeof analyzeBundle>>, toolsPaths: (string | string[])[], { enableSourcemap, enableMinify, enableEsmShim, externals }: BundlerOptions, additionalEntries: Record<string, string>): Promise<InputOptions>;
+    protected getBundlerOptions(serverFile: string, mastraEntryFile: string, analyzedBundleInfo: Awaited<ReturnType<typeof analyzeBundle>>, toolsPaths: (string | string[])[], { enableSourcemap, enableMinify, enableEsmShim, externals }: BundlerOptions, additionalEntries: Record<string, string>, toolProjectRoot: string): Promise<InputOptions>;
     getAllToolPaths(mastraDir: string, toolsPaths?: (string | string[])[]): (string | string[])[];
-    listToolsInputOptions(toolsPaths: (string | string[])[]): Promise<Record<string, string>>;
+    listToolsInputOptions(toolsPaths: (string | string[])[], projectRoot?: string): Promise<{
+        [k: string]: string;
+    }>;
     protected _bundle(serverFile: string, mastraEntryFile: string, { projectRoot, outputDirectory, enableEsmShim, }: {
         projectRoot: string;
         outputDirectory: string;
         enableEsmShim?: boolean;
     }, toolsPaths?: (string | string[])[], bundleLocation?: string): Promise<void>;
-    lint(_entryFile: string, _outputDirectory: string, toolsPaths: (string | string[])[]): Promise<void>;
+    lint(_entryFile: string, outputDirectory: string, toolsPaths: (string | string[])[]): Promise<void>;
 }
 //# sourceMappingURL=index.d.ts.map

package/dist/bundler/index.d.ts.map

@@ -1 +1 @@
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package/dist/bundler/index.js

@@ -4,9 +4,10 @@ import { i as DepsService, t as FileService } from "../services-B9KRKBT-.js";
 import { n as getInputOptions, t as createBundler } from "../bundler-CeRgL7UB.js";
 import { t as getBundlerOptions } from "../bundlerOptions-B1bqZwRo.js";
 import { execSync } from "child_process";
+import { createHash } from "crypto";
 import { existsSync } from "fs";
 import { readFile, rm, stat, writeFile } from "fs/promises";
-import { dirname, join, posix } from "path";
+import { dirname, join, posix, relative } from "path";
 import { MastraBundler } from "@mastra/core/bundler";
 import { ErrorCategory, ErrorDomain, MastraError } from "@mastra/core/error";
 import virtual from "@rollup/plugin-virtual";
@@ -162,6 +163,10 @@ const applySourceDependencyRange = (dependencyName, dependencyInfo, constraints)
 		version: declared
 	};
 };
+function toolIdForEntry(relativeEntryFile) {
+	const digest = createHash("sha256").update(relativeEntryFile).digest("hex");
+	return `${digest.slice(0, 8)}-${digest.slice(8, 12)}-${digest.slice(12, 16)}-${digest.slice(16, 20)}-${digest.slice(20, 32)}`;
+}
 var Bundler = class extends MastraBundler {
 	analyzeOutputDir = ".build";
 	outputDir = "output";
@@ -314,7 +319,7 @@ var Bundler = class extends MastraBundler {
 		}, null, 2));
 		this.logger.info("Wrote mastra-project.json for Software Factory project");
 	}
-	async getBundlerOptions(serverFile, mastraEntryFile, analyzedBundleInfo, toolsPaths, { enableSourcemap, enableMinify, enableEsmShim, externals }, additionalEntries) {
+	async getBundlerOptions(serverFile, mastraEntryFile, analyzedBundleInfo, toolsPaths, { enableSourcemap, enableMinify, enableEsmShim, externals }, additionalEntries, toolProjectRoot) {
 		const { workspaceRoot } = await getWorkspaceInformation({ mastraEntryFile });
 		const closestPkgJson = pkg.up({ cwd: dirname(mastraEntryFile) });
 		const projectRoot = closestPkgJson ? dirname(closestPkgJson) : process.cwd();
@@ -326,7 +331,7 @@ var Bundler = class extends MastraBundler {
 			enableEsmShim,
 			externalsPreset: externals === true
 		});
-		const toolsInputOptions = await this.listToolsInputOptions(toolsPaths);
+		const toolsInputOptions = await this.listToolsInputOptions(toolsPaths, toolProjectRoot);
 		const entryInputs = {};
 		const virtualEntries = {};
 		const entries = {
@@ -352,8 +357,8 @@ var Bundler = class extends MastraBundler {
 		if (toolsPaths.length === 0) return [defaultPaths];
 		return [...toolsPaths, defaultPaths];
 	}
-	async listToolsInputOptions(toolsPaths) {
-		const inputs = {};
+	async listToolsInputOptions(toolsPaths, projectRoot = process.cwd()) {
+		const entries = /* @__PURE__ */ new Map();
 		for (const toolPath of toolsPaths) {
 			const expandedPaths = await glob(toolPath, {
 				absolute: true,
@@ -369,12 +374,12 @@ var Bundler = class extends MastraBundler {
 					this.logger.warn("No entry file found, skipping", { path });
 					continue;
 				}
-				const uniqueToolID = crypto.randomUUID();
 				const normalizedEntryFile = entryFile.replaceAll("\\", "/");
-				inputs[`tools/${uniqueToolID}`] = normalizedEntryFile;
+				const relativeEntryFile = relative(projectRoot, entryFile).replaceAll("\\", "/");
+				entries.set(relativeEntryFile, normalizedEntryFile);
 			} else this.logger.warn("Tool path does not exist, skipping", { path });
 		}
-		return inputs;
+		return Object.fromEntries([...entries.entries()].sort(([first], [second]) => first < second ? -1 : first > second ? 1 : 0).map(([relativeEntryFile, entryFile]) => [`tools/${toolIdForEntry(relativeEntryFile)}`, entryFile]));
 	}
 	async _bundle(serverFile, mastraEntryFile, { projectRoot, outputDirectory, enableEsmShim = true }, toolsPaths = [], bundleLocation = join(outputDirectory, this.outputDir)) {
 		const analyzeDir = join(outputDirectory, this.analyzeOutputDir);
@@ -389,7 +394,7 @@ var Bundler = class extends MastraBundler {
 		};
 		let analyzedBundleInfo;
 		try {
-			const resolvedToolsPaths = await this.listToolsInputOptions(toolsPaths);
+			const resolvedToolsPaths = await this.listToolsInputOptions(toolsPaths, projectRoot);
 			analyzedBundleInfo = await analyzeBundle([
 				serverFile,
 				...Object.values(additionalEntries),
@@ -447,7 +452,7 @@ var Bundler = class extends MastraBundler {
 				logger: this.logger
 			});
 			this.logger.info("Bundling Mastra application");
-			const inputOptions = await this.getBundlerOptions(serverFile, mastraEntryFile, analyzedBundleInfo, toolsPaths, internalBundlerOptions, additionalEntries);
+			const inputOptions = await this.getBundlerOptions(serverFile, mastraEntryFile, analyzedBundleInfo, toolsPaths, internalBundlerOptions, additionalEntries, projectRoot);
 			await (await this.createBundler({
 				...inputOptions,
 				logLevel: inputOptions.logLevel === "silent" ? "warn" : inputOptions.logLevel,
@@ -504,8 +509,8 @@ export const tools = [${toolsExports.join(", ")}]`);
 			}, error);
 		}
 	}
-	async lint(_entryFile, _outputDirectory, toolsPaths) {
-		const toolsInputOptions = await this.listToolsInputOptions(toolsPaths);
+	async lint(_entryFile, outputDirectory, toolsPaths) {
+		const toolsInputOptions = await this.listToolsInputOptions(toolsPaths, dirname(outputDirectory));
 		const toolsLength = Object.keys(toolsInputOptions).length;
 		if (toolsLength > 0) this.logger.info("Found tools", { count: toolsLength });
 	}