@mark1russell7/rigor-statistics 0.1.9 → 0.1.10

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/README.md CHANGED
@@ -117,6 +117,8 @@ The default expansion has one product for each pair of levels of two dimensions.
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  | `pairedPermutation(candidate, baseline, options)` | The paired permutation test (random sign flips). It uses the size of each difference. |
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  | `wilson(k, n, z)` | The Wilson interval of a proportion. |
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  | `medianInterval(values, level)` | The distribution-free interval of a median, from two order statistics. It gives `low`, `high`, the `rank` of `low` and the `coverage`. |
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+ | `quantileInterval(values, p, level)` | The distribution-free interval of a quantile, from two order statistics. A side with no rank is infinite. The values must be independent draws. |
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+ | `quantileSamples(p, level)` | The fewest independent values that give a quantile an upper bound. At the level 0.95: 72 values for p95, 368 for p99 and 3,688 for p99.9. |
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  | `binomialInterval(n, p, level)`, `negativeBinomialInterval(successes, p, level)` | The central interval of a binomial count, and of a count of failures before `successes` successes. Each tail outside holds `(1 - level) / 2` or less. |
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  | `holm(pValues, level)` | The Holm correction of a family of tests. |
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  | `spearman`, `kendallTau`, `ranks` | The rank correlations, with mean ranks for ties. |
package/build/index.d.ts CHANGED
@@ -763,6 +763,33 @@ interface MedianInterval {
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  * is less than `level`.
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  */
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  export declare function medianInterval(values: readonly number[], level?: number): MedianInterval;
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+ /** The distribution-free interval of a quantile, from two order statistics of the sample. */
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+ interface QuantileInterval {
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+ /** The value x_(lowRank), or `-Infinity` when the sample has no rank for a lower bound. */
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+ readonly low: number;
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+ /** The value x_(highRank), or `Infinity` when the sample has no rank for an upper bound. */
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+ readonly high: number;
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+ /** The rank of `low`, from 1, or 0 when `low` is `-Infinity`. */
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+ readonly lowRank: number;
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+ /** The rank of `high`, from 1, or n + 1 when `high` is `Infinity`. */
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+ readonly highRank: number;
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+ /** The chance that the interval holds the quantile of the population. */
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+ readonly coverage: number;
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+ }
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+ /**
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+ * This function gives the distribution-free interval of the quantile `p` of a sample. Each tail outside the interval holds
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+ * (1 - level) / 2 or less. Let X ~ Binomial(n, p). The lower rank is the largest l with P(X <= l - 1) in the tail. The upper
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+ * rank is the smallest u with P(X >= u) in the tail. The values must be independent draws, or the coverage is false.
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+ *
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+ * A side with no such rank is infinite. Thus a small sample gives no upper bound: refer to `quantileSamples`.
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+ */
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+ export declare function quantileInterval(values: readonly number[], p: number, level?: number): QuantileInterval;
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+ /**
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+ * This function gives the fewest independent values that give the quantile `p` an upper bound at `level`: the smallest n with
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+ * p^n <= (1 - level) / 2. With that n, the upper bound is the largest value. At the level 0.95, p95 needs 72 values, p99 needs
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+ * 368 values and p99.9 needs 3,688 values.
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+ */
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+ export declare function quantileSamples(p: number, level?: number): number;
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  /** A central interval of a count, from `low` to `high`, both included. */
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  interface CountInterval {
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  readonly low: number;
@@ -893,5 +920,5 @@ interface CalibrationLevel {
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  }
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  /** The hit rate of each stated level, from the lowest level. */
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  export declare function calibration(forecasts: readonly Forecast[]): CalibrationLevel[];
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- export type { BootstrapOptions, CalibrationLevel, CategoricalDimension, CompareOptions, Comparison, ContinuousDimension, Corrected, CountInterval, Effect, Forecast, Interval, LeastSquaresFit, LeastSquaresOptions, MedianInterval, NoiseOptions, NoiseState, NoiseVerdict, OrdinalDimension, ParsedResponseRecord, PermutationOptions, PermutationResult, Proportion, QuantileMethod, ResponseAbsentPoint, ResponseBand, ResponseCurvePoint, ResponseData, ResponseDimension, ResponseDimensionBase, ResponseFactor, ResponseFault, ResponseFitOptions, ResponseFold, ResponseFoldError, ResponseHeldOutError, ResponseInputValue, ResponseMeasure, ResponseModel, ResponseModelBase, ResponsePoint, ResponseReason, ResponseRecord, ResponseSlice, ResponseSliceOptions, ResponseSlicePoint, ResponseSurface, ResponseSurfaceAbsentPoint, ResponseSurfaceOptions, ResponseSurfacePoint, ResponseTableCell, ResponseValue, ResponseViewOptions, ResponseWhen, RidgeInput, RidgeInputBase, RidgeLevelInput, RidgeNumberInput, RidgeOptions, RidgeRankInput, RidgeResponseModel, RidgeTerm, Summary, TableResponseModel };
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+ export type { BootstrapOptions, CalibrationLevel, CategoricalDimension, CompareOptions, Comparison, ContinuousDimension, Corrected, CountInterval, Effect, Forecast, Interval, LeastSquaresFit, LeastSquaresOptions, MedianInterval, NoiseOptions, NoiseState, NoiseVerdict, OrdinalDimension, ParsedResponseRecord, PermutationOptions, PermutationResult, Proportion, QuantileInterval, QuantileMethod, ResponseAbsentPoint, ResponseBand, ResponseCurvePoint, ResponseData, ResponseDimension, ResponseDimensionBase, ResponseFactor, ResponseFault, ResponseFitOptions, ResponseFold, ResponseFoldError, ResponseHeldOutError, ResponseInputValue, ResponseMeasure, ResponseModel, ResponseModelBase, ResponsePoint, ResponseReason, ResponseRecord, ResponseSlice, ResponseSliceOptions, ResponseSlicePoint, ResponseSurface, ResponseSurfaceAbsentPoint, ResponseSurfaceOptions, ResponseSurfacePoint, ResponseTableCell, ResponseValue, ResponseViewOptions, ResponseWhen, RidgeInput, RidgeInputBase, RidgeLevelInput, RidgeNumberInput, RidgeOptions, RidgeRankInput, RidgeResponseModel, RidgeTerm, Summary, TableResponseModel };
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  //# sourceMappingURL=index.d.ts.map
@@ -1 +1 @@
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+ {"version":3,"file":"index.d.ts","names":[],"sources":["../src/describe.ts","../src/regression.ts","../src/bootstrap.ts","../src/ridge.ts","../src/response.ts","../src/response-parse.ts","../src/response-fit.ts","../src/tests.ts","../src/rank.ts","../src/discrete.ts","../src/compare.ts"],"mappings":";;;;;;KAOY;;wBAmBI,OAAO;wBAIP,KAAK;;;;;wBAgBL,GAAG;;;;;;;wBAgBH,eAAe,iCAAiC,WAAW,SAAQ;;wBAkBnE,SAAS,2BAA2B,WAAW,SAAQ;;;;;wBASvD,OAAO;;UAQN;WACN;WACA;;WAEA;WACA;;WAEA;WACA;;WAEA;WACA;;WAEA;;wBAGK,UAAU,4BAA4B;;;;;;UC3GrC;;WAEN;;UAGM;;WAEN;;WAEA;;;;;WAKA;;WAEA;;WAEA;;;;;;;;;;;wBAkBK,aAAa,mCAAmC,sBAAsB,UAAS,sBAA2B;UC/BzG;;WAEN;;WAEA;;WAEA;;WAEA,SAAS;;;;;;WAMT;;UAGM;;WAEN;WACA;WACA;WACA;WACA;;WAEA;;WAEA;;;;;;wBAOK,UAAU,GAAG,eAAe,KAAK,YAAY,iBAAiB,gBAAgB,UAAS,mBAAwB;;;;;;;;wBAsB/G,aAAa,GAAG,GAC9B,YAAY,KACZ,YAAY,KACZ,YAAY,YAAY,KAAK,YAAY,gBACzC,UAAS,mBACR;;;;;;wBAwBa,qBAAqB,8BAA8B,gCAAgC,UAAS,mBAAwB;;;;;;;wBAUpH,sBACd,mCACA,sBACA,UAAS,mBAAmB,sBAC3B;;wBAmFa,gBAAgB,2BAA2B,UAAS,mBAAwB;;;;;;wBAS5E,kBAAkB,GAChC,eAAe,KACf,UAAU,KAAK,cACf,YAAY,eAAe,gBAC3B,UAAS,mBACR;;;;;;;UCxMc;;WAEN;;;;;;;;;;;;wBAoBK,WAAW,MAAM,mBAAmB,QAAQ,mBAAmB,gBAAgB,UAAS;;qBCd3F;;KAGD;;KAGA,qBAAqB;;UAGhB;;WAEN;WACA,iBAAiB;;;UAIX;;WAEN;;WAEA;;WAEA;;WAEA,OAAO;;;UAID,4BAA4B;WAClC;;WAEA;;WAEA;;;UAIM,yBAAyB;WAC/B;WACA;;WAEA;;;UAIM,6BAA6B;WACnC;WACA;;;KAIC,oBAAoB,sBAAsB,mBAAmB;;UAGxD;;WAEN;WACA;;WAEA;;WAEA;;;;;WAKA;;;UAIM;;WAEN;;WAEA;;;UAIM;WACN;;WAEA,QAAQ,SAAS,eAAe;;WAEhC,UAAU,SAAS;;WAEnB;;WAEA,SAAS,SAAS;;;KAIjB;WAA4B;WAA4B;;WAA6B;WAA4B,OAAO;;;UAGnH;WACN;;WAEA;;;UAIM,yBAAyB;WAC/B;WACA;WACA;WACA;;;UAIM,uBAAuB;WAC7B;WACA;WACA;WACA;;;UAIM,wBAAwB;WAC9B;WACA;;;KAIC,aAAa,mBAAmB,iBAAiB;;UAG5C;WACN,kBAAkB;WAClB;;;UAIM;;WAEN;;WAEA;;WAEA;;;UAIM,2BAA2B;WACjC;;WAEA;WACA,iBAAiB;WACjB;WACA,gBAAgB;;;UAIV;;WAEN,aAAa;;WAEb;;WAEA;;;UAIM,2BAA2B;WACjC;WACA;;WAEA;WACA,gBAAgB;;WAEhB;;;KAIC,gBAAgB,qBAAqB;;UAGhC;;WAEN;;WAEA;;WAEA;;WAEA;;;UAIM;;WAEN;;WAEA,QAAQ,SAAS,eAAe;;;;;WAKhC,cAAc,SAAS,eAAe,SAAS;;;UAIzC;WACN,eAAe;WACf;WACA,qBAAqB;WACrB,mBAAmB;;WAEnB,mBAAmB;WACnB,iBAAiB;;;UAIX,uBAAuB;WAC7B,iBAAiB;WACjB,gBAAgB;;;UAIV;;WAEN;;WAEA;;WAEA;;WAEA;;WAEA;;WAEA;;;UAIM;;WAEN,OAAO,SAAS,eAAe;;WAE/B;;;;;WAKA;;WAEA;;;UAIM,6BAA6B;;WAEnC;;;UAIM,+BAA+B;;WAErC;;;;;;UAOM;WACN;WACA;WACA;;;;;;;WAOA;;WAEA;;;UAIM,2BAA2B;;WAEjC,IAAI;;;UAIE;WACN;;WAEA,IAAI;WACJ;WACA;;;UAIM;WACN;;WAEA,IAAI;;WAEJ;WACA;;;UAIM;WACN;WACA;;WAEA,MAAM,SAAS,eAAe;WAC9B,gBAAgB;WAChB,iBAAiB;;WAEjB,iBAAiB;WACjB,OAAO;;WAEP;;;UAIM;WACN;;WAEA,cAAc,eAAe;WAC7B;WACA;;;UAIM;WACN;;WAEA,cAAc,eAAe;;WAE7B;WACA;;;UAIM;WACN;WACA;;WAEA,MAAM,SAAS,eAAe;WAC9B,YAAY;WACZ,YAAY;;WAEZ,0BAA0B;WAC1B,iBAAiB;;WAEjB,iBAAiB;WACjB,OAAO;;WAEP;;;wBAuBK,UAAU,WAAW,mBAAmB,QAAQ,SAAS;;;;;;;;;;;wBA4FzD,gBAAgB,OAAO,eAAe,QAAQ,SAAS,eAAe;;;;;wBAQtE,aAAa,QAAQ,KAAK,0BAA0B,kBAAkB;;;;;;;;;;;;wBAqCtE,eAAe,QAAQ,gBAAgB,iBAAiB,yBAAyB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;wBAgPjF,cAAc,QAAQ,gBAAgB,iBAAiB,SAAS,uBAAuB;;;;;;;wBAsBvF,gBAAgB,QAAQ,gBAAgB,iBAAiB,SAAS,yBAAyB;;;;;;;;wBA4B3F,cAAc,QAAQ,KAAK,+BAA+B,0CAA0C;;qBC3yBvG;;UAGI;;WAEN;;WAEA;;;KAIC;WAAkC;WAAmB,QAAQ;;WAA8B;WAAoB,iBAAiB;;;;;;;;;;;;;;;;;;;;;;;;;;wBAgf5H,oBAAoB,iBAAiB;;UC/dpC;;WAEN;;WAEA;;WAEA;;WAEA;;;;;;;;;WASA;;WAEA,2BAA2B;;WAE3B;;WAEA;;WAEA;;;;;WAKA;;;qBAIE;;qBAGA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;wBAoTG,YAAY,MAAM,cAAc,UAAS,qBAA0B;;;;;;wBCvVnE,SAAS,gBAAgB,eAAe;;;;;wBAaxC,cAAc,WAAW,gBAAc;;qBAO1C;;UAGI;WACN;WACA;;;;;;wBAOK,OAAO,WAAW,WAAW,aAAkB;;UAc9C;;WAEN;;WAEA;;WAEA;;;;;;;wBAQK,KAAK,4BAA4B,iBAAe;UAa/C;;WAEN;;WAEA;;WAEA,aAAa;;UAGP;;WAEN;;WAEA;WACA;;;;;;wBAOK,kBAAkB,8BAA8B,6BAA6B,UAAS,qBAA0B;;wBCtHhH,MAAM;;;;;wBAgBN,SAAS,sBAAsB;;qBAmBlC;;;;;;wBAQG,WAAW,sBAAsB,sBAAsB;;UC1BtD;WACN;WACA;;WAEA;;WAEA;;;;;;;;;;wBAWK,eAAe,2BAA2B,iBAAe;;UAqBxD;;WAEN;;WAEA;;WAEA;;WAEA;;WAEA;;;;;;;;;wBAUK,iBAAiB,2BAA2B,WAAW,iBAAe;;;;;;wBAsCtE,gBAAgB,WAAW;;UAW1B;WACN;WACA;;WAEA;;;;;;;wBAQK,iBAAiB,WAAW,WAAW,iBAAe;;;;;;wBA2BtD,yBAAyB,mBAAmB,WAAW,iBAAe;UCvKrE;;WAEN;;WAEA;;;;;;WAMA;;;;;;wBAgBK,WAAW,2BAA2B,UAAS;;;;;KASnD;;UAGK;;WAEN;WACA;;WAEA;;WAEA;WACA;;WAEA;WACA,OAAO;;;;;;;;wBASF,aAAa,2BAA2B,UAAS;WAA0B;IAAqC;UAW/G;;WAEN;;WAEA;;WAEA;;;UAIM;WACN;WACA;;WAEA;;WAEA;;UAGM;;WAEN;WACA;;WAEA;;WAEA;;WAEA;;WAEA,QAAQ;;WAER;;WAEA;;WAEA;WACA,cAAc;;WAEd;WACA,cAAc;;;;;;;;wBAST,cAAc,2BAA2B,UAAS,iBAAsB;;UA6CvE;WACN;WACA;;;wBASK,MAAM,oBAAoB;;UAQzB;WACN;WACA;WACA;;WAEA;;WAEA,UAAU;;;wBAIL,YAAY,oBAAoB,aAAa"}
package/build/index.js CHANGED
@@ -2129,8 +2129,8 @@ function kendallTau(a, b, seed = 1) {
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  }
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  // src/discrete.ts
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  /**
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- * The intervals that come from a discrete distribution. The interval of a median comes from the order statistics.
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- * The central interval of a count comes from a binomial or a negative binomial distribution.
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+ * The intervals that come from a discrete distribution. The interval of a median or of a quantile comes from the order
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+ * statistics. The central interval of a count comes from a binomial or a negative binomial distribution.
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  */
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  function whole(name, value) {
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  if (!Number.isSafeInteger(value) || value < 0) throw new RangeError(`${name}: ${value} is not a whole number of 0 or more.`);
@@ -2184,6 +2184,58 @@ function medianInterval(values, level = .95) {
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  };
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  }
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  /**
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+ * This function gives the distribution-free interval of the quantile `p` of a sample. Each tail outside the interval holds
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+ * (1 - level) / 2 or less. Let X ~ Binomial(n, p). The lower rank is the largest l with P(X <= l - 1) in the tail. The upper
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+ * rank is the smallest u with P(X >= u) in the tail. The values must be independent draws, or the coverage is false.
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+ *
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+ * A side with no such rank is infinite. Thus a small sample gives no upper bound: refer to `quantileSamples`.
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+ */
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+ function quantileInterval(values, p, level = .95) {
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+ if (values.length === 0) throw new RangeError("quantileInterval: the list is empty.");
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+ for (const v of values) if (Number.isNaN(v)) throw new RangeError("quantileInterval: the list has a NaN.");
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+ if (!(p > 0 && p < 1)) throw new RangeError(`quantileInterval: p is more than 0 and less than 1, not ${p}.`);
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+ const tail = levelOf("quantileInterval", level);
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+ const s = sorted(values);
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+ const n = s.length;
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+ const terms = binomialTerms(n, p);
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+ let lowRank = 0;
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+ let left = 0;
2203
+ let below = terms[0];
2204
+ while (lowRank < n && below <= tail) {
2205
+ lowRank += 1;
2206
+ left = below;
2207
+ below += terms[lowRank];
2208
+ }
2209
+ let highRank = n + 1;
2210
+ let right = 0;
2211
+ let above = terms[n];
2212
+ while (highRank > 1 && above <= tail) {
2213
+ highRank -= 1;
2214
+ right = above;
2215
+ above += terms[highRank - 1];
2216
+ }
2217
+ return {
2218
+ low: lowRank === 0 ? -Infinity : s[lowRank - 1],
2219
+ high: highRank === n + 1 ? Infinity : s[highRank - 1],
2220
+ lowRank,
2221
+ highRank,
2222
+ coverage: Math.max(0, 1 - left - right)
2223
+ };
2224
+ }
2225
+ /**
2226
+ * This function gives the fewest independent values that give the quantile `p` an upper bound at `level`: the smallest n with
2227
+ * p^n <= (1 - level) / 2. With that n, the upper bound is the largest value. At the level 0.95, p95 needs 72 values, p99 needs
2228
+ * 368 values and p99.9 needs 3,688 values.
2229
+ */
2230
+ function quantileSamples(p, level = .95) {
2231
+ if (!(p > 0 && p < 1)) throw new RangeError(`quantileSamples: p is more than 0 and less than 1, not ${p}.`);
2232
+ const tail = levelOf("quantileSamples", level);
2233
+ const [logTail, logP] = [Math.log(tail), Math.log(p)];
2234
+ let n = Math.max(1, Math.ceil(logTail / logP));
2235
+ while (n > 1 && (n - 1) * logP <= logTail) n -= 1;
2236
+ return n;
2237
+ }
2238
+ /**
2187
2239
  * The central interval of a count X ~ Binomial(n, p). `low` is the smallest k with P(X <= k) > (1 - level) / 2.
2188
2240
  * `high` is the largest k with P(X >= k) > (1 - level) / 2. Each tail outside the interval holds (1 - level) / 2
2189
2241
  * or less. The two tails are separate sums, so that a small upper tail keeps its digits.
@@ -2382,6 +2434,6 @@ function calibration(forecasts) {
2382
2434
  interval: wilson(hits, n)
2383
2435
  }));
2384
2436
  }
2385
- export { KENDALL_EXACT, RESPONSE_LAMBDAS, RESPONSE_MAX_POWER, RESPONSE_MAX_TERMS, RESPONSE_RECORDS_SCHEMA, Z95, binomialInterval, bootstrap, bootstrapClusters, bootstrapLeastSquares, bootstrapMedian, bootstrapMedianRatio, bootstrapTwo, brier, calibration, compareRatios, fitResponse, heldOutError, heldOutErrorAt, holm, kendallTau, leastSquares, mean, median, medianInterval, negativeBinomialInterval, noiseFloor, noiseVerdict, pairedPermutation, parseResponseRecord, predictResponse, quantile, quantileSorted, ranks, responseCells, ridgeSolve, sd, signTest, signTestPower, sliceResponse, sorted, spearman, summarize, surfaceResponse, whenHolds, wilson };
2437
+ export { KENDALL_EXACT, RESPONSE_LAMBDAS, RESPONSE_MAX_POWER, RESPONSE_MAX_TERMS, RESPONSE_RECORDS_SCHEMA, Z95, binomialInterval, bootstrap, bootstrapClusters, bootstrapLeastSquares, bootstrapMedian, bootstrapMedianRatio, bootstrapTwo, brier, calibration, compareRatios, fitResponse, heldOutError, heldOutErrorAt, holm, kendallTau, leastSquares, mean, median, medianInterval, negativeBinomialInterval, noiseFloor, noiseVerdict, pairedPermutation, parseResponseRecord, predictResponse, quantile, quantileInterval, quantileSamples, quantileSorted, ranks, responseCells, ridgeSolve, sd, signTest, signTestPower, sliceResponse, sorted, spearman, summarize, surfaceResponse, whenHolds, wilson };
2386
2438
 
2387
2439
  //# sourceMappingURL=index.js.map