@mark1russell7/rigor-mutation 0.1.2 → 0.1.3

package/README.md

@@ -85,6 +85,26 @@ A selection fails in these conditions:
 
 The gate of a package with parts applies to each part. Each part must have a score at the gate or above it. A part under the gate fails, also when the score of all the parts together is above the gate.
 
+## The tests that a run read
+
+A score is a read of the tests only when the run read all of them. A run that read half of the tests gives a score with no meaning. Two options of `scores` find such a run. They need the field `testFiles` of the report, which the Vitest runner gives.
+
+- Each score line gives the count of the tests of the run. `--last <file>` compares it with the last good count of the selection in the file. A fall of more than `maxTestFall` percent fails, also above the gate. The default of `maxTestFall` is 20. `--write-last <file>` writes the counts of the selections that pass.
+- `--test-files` compares the test files on the disk with the test files of the report. A test file on the disk that the report does not read fails.
+
+The lane states each exception with its reason:
+
+```json
+{
+  "plannedFalls": { "collections.impl": "the tests of the old map moved to the package maps" },
+  "packages": {
+    "collections": { "dir": "packages/collections", "mutate": ["src/**/*.ts"], "notRead": { "bench/hash.test.ts": "a bench, CI starts it in its own job" } }
+  }
+}
+```
+
+Remove a planned fall after the next good count.
+
 ## The load check
 
 Stryker copies the folder of the package and starts the tests in the copy. A relative path that leaves the folder then finds no file. A test file that does not load gives no failed test. Thus each mutant that only that file detects survives, with no error.
@@ -113,4 +133,4 @@ const score = scoreReport(parseReport(JSON.parse(reportText)), selection);
 console.log(formatScore(score)); // collections.impl: 91.20 % (456 of 500, 44 survived), gate 80 %: pass
 ```
 
-The package also exports `selectionNames`, `runSelections`, `summaryMarkdown`, `findDisables`, `compareDisables`, `leavingPaths`, `isConfigFile` and `runCli`.
+The package also exports `selectionNames`, `runSelections`, `summaryMarkdown`, `findDisables`, `compareDisables`, `leavingPaths`, `isConfigFile`, `testCount`, `testFall`, `unreadTestFiles`, `failScore` and `runCli`.

package/build/cli.js

@@ -1,5 +1,5 @@
 #!/usr/bin/env node
-import { n as runCli } from "./run-DDLcArjy.js";
+import { n as runCli } from "./run-COJdkfIk.js";
 // src/cli.ts
 try {
 	process.exitCode = runCli(process.argv.slice(2), {

package/build/index.d.ts

@@ -29,6 +29,11 @@ interface PackageLane {
    * owns the keys of `STRYKER_OWNED`, so the field cannot have them.
    */
   readonly stryker?: Readonly<Record<string, unknown>>;
+  /**
+   * Each test file of this field is on the disk, and no report reads it. The value gives the reason. `scores
+   * --test-files` fails for each other test file on the disk that the report does not read. The file is from `dir`.
+   */
+  readonly notRead?: Readonly<Record<string, string>>;
 }
 /** The keys of the Stryker config that the lane owns. The field `stryker` of a package cannot have them. */
 export declare const STRYKER_OWNED: readonly string[];
@@ -37,6 +42,13 @@ interface Lane {
   readonly packages: Readonly<Record<string, PackageLane>>;
   /** This field gives the list of the disabled mutants, from the folder of the lane file. The default is `mutation-disables.json`. */
   readonly disables?: string;
+  /**
+   * This field gives the highest fall of the test count in percent against the last good count. The default is 20.
+   * `scores --last` fails a selection with a higher fall: the report did not read all the tests.
+   */
+  readonly maxTestFall?: number;
+  /** Each selection of this field can have a higher fall of its test count. The value gives the reason. */
+  readonly plannedFalls?: Readonly<Record<string, string>>;
 }
 /** A selection is one Stryker run: a package (`collections`) or a part of a package (`collections.impl`). */
 interface Selection {
@@ -156,11 +168,17 @@ interface Mutant {
     };
   };
 }
-/** The JSON report of Stryker: the mutants of each mutated file. */
+/** The JSON report of Stryker: the mutants of each mutated file, and the tests of each test file that the run read. */
 interface MutationReport {
   readonly files: Readonly<Record<string, {
     readonly mutants: readonly Mutant[];
   }>>;
+  /** Stryker gives this field when the test runner tells the tests, as the Vitest runner does. */
+  readonly testFiles?: Readonly<Record<string, {
+    readonly tests: readonly {
+      readonly name: string;
+    }[];
+  }>> | undefined;
 }
 /** The score of one selection. */
 interface Score {
@@ -180,6 +198,8 @@ interface Score {
   readonly percent: number;
   /** The score in percent with the clock time-outs counted as detected, as Stryker counts them. The gate does not read it. */
   readonly percentWithClock: number;
+  /** The count of the tests that the run read, from `testFiles` of the report. It is undefined when the report has no `testFiles`. */
+  readonly tests: number | undefined;
   readonly pass: boolean;
   /** The reason of a failure. */
   readonly reason: string | undefined;

package/build/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","names":[],"sources":["../src/lane.ts","../src/config.ts","../src/score.ts","../src/disables.ts","../src/load.ts","../src/run.ts"],"mappings":";;;;;UAQiB;;WAEN;;WAEA;;;;;WAKA,QAAQ,SAAS;;WAEjB;;WAEA;;;;;WAKA;;WAEA;;;;;WAKA,UAAU,SAAS;;;qBAIjB;;UAGI;WACN,UAAU,SAAS,eAAe;;WAElC;;;UAIM;WACN;WACA;WACA;WACA;WACA;WACA;WACA;WACA;WACA,SAAS,SAAS;;;;;;;wBAkDb,UAAU,gBAAgB;;wBAU1B,eAAe,MAAM;;wBAKrB,cAAc,MAAM;;;;;;wBASpB,OAAO,MAAM,MAAM,eAAe;;;;;;;wBAgClC,aAAa,WAAW,WAAW;;;;;;;;wBAcnC,WAAW,MAAM,MAAM,aAAa;;UC7KnC;;WAEN;;WAEA;;;;;WAKA;;;UAIM;;WAEN;WACA;WACA;aAAoB;;WACpB;WACA;WACA;WACA;aAAyB;;WACzB;aAAyB;;WACzB;aAAuB;aAAuB;aAAsB;;WACpE;WACA;WACA;WACA;WACA;;;qBAIE;;;;;qBAMA;;qBAGA;;;;;;wBAOG,cAAc,WAAW,WAAW,UAAS,gBAAqB;;;;;;;;;;UCzCjE;WACN;WACA;;WAEA;WACA;aAAqB;eAAkB;;;;;UAIjC;WACN,OAAO,SAAS;aAA0B,kBAAkB;;;;UAItD;WACN;WACA;;WAEA;;WAEA;;WAEA;;WAEA;;WAEA;;WAEA;;WAEA;WACA;;WAEA;;;qBAME,aAAc,GAAG;;;;;;wBAOd,YAAY,gBAAgB;;;;;;wBAc5B,YAAY,QAAQ,gBAAgB;WAAsB;WAAuB;IAA6B;;wBA0C9G,YAAY,GAAG;;wBAQf,gBAAgB,iBAAiB;;;;;;;UCjHhC;WACN;WACA;;;UAIM;;WAEN;;WAEA;;WAEA,mBAAmB;WACnB;;;wBAIK,aAAa;WAA2B;WAAuB;MAAmB;;wBA+BlF,gBAAgB,gBAAgB,WAAW,iBAAiB,YAAY;;UC9CvE;;WAEN;;WAEA;;WAEA;;;UAIM;;WAEN;WACA;;;;;;;;wBAoBK,aAAa,cAAc;;;;;;;;;;wBAsC3B,aAAa,gBAAgB,eAAe,wBAAwB;;UCnEnE;WACN;WACA,SAAS;WACT,SAAS;;;qBAIP;;wBA4HG,OAAO,yBAAyB,IAAI"}
+{"version":3,"file":"index.d.ts","names":[],"sources":["../src/lane.ts","../src/config.ts","../src/score.ts","../src/disables.ts","../src/load.ts","../src/run.ts"],"mappings":";;;;;UAQiB;;WAEN;;WAEA;;;;;WAKA,QAAQ,SAAS;;WAEjB;;WAEA;;;;;WAKA;;WAEA;;;;;WAKA,UAAU,SAAS;;;;;WAKnB,UAAU,SAAS;;;qBAIjB;;UAGI;WACN,UAAU,SAAS,eAAe;;WAElC;;;;;WAKA;;WAEA,eAAe,SAAS;;;UAOlB;WACN;WACA;WACA;WACA;WACA;WACA;WACA;WACA;WACA,SAAS,SAAS;;;;;;;wBAsDb,UAAU,gBAAgB;;wBAkB1B,eAAe,MAAM;;wBAKrB,cAAc,MAAM;;;;;;wBASpB,OAAO,MAAM,MAAM,eAAe;;;;;;;wBAgClC,aAAa,WAAW,WAAW;;;;;;;;wBAcnC,WAAW,MAAM,MAAM,aAAa;;UCxMnC;;WAEN;;WAEA;;;;;WAKA;;;UAIM;;WAEN;WACA;WACA;aAAoB;;WACpB;WACA;WACA;WACA;aAAyB;;WACzB;aAAyB;;WACzB;aAAuB;aAAuB;aAAsB;;WACpE;WACA;WACA;WACA;WACA;;;qBAIE;;;;;qBAMA;;qBAGA;;;;;;wBAOG,cAAc,WAAW,WAAW,UAAS,gBAAqB;;;;;;;;;;UCzCjE;WACN;WACA;;WAEA;WACA;aAAqB;eAAkB;;;;;UAIjC;WACN,OAAO,SAAS;aAA0B,kBAAkB;;;WAE5D,YAAY,SAAS;aAA0B;eAA2B;;;;;UAIpE;WACN;WACA;;WAEA;;WAEA;;WAEA;;WAEA;;WAEA;;WAEA;;WAEA;;WAEA;WACA;;WAEA;;;qBAME,aAAc,GAAG;;;;;;wBAOd,YAAY,gBAAgB;;;;;;wBA+D5B,YAAY,QAAQ,gBAAgB;WAAsB;WAAuB;IAA6B;;wBA0C9G,YAAY,GAAG;;wBASf,gBAAgB,iBAAiB;;;;;;;UCvKhC;WACN;WACA;;;UAIM;;WAEN;;WAEA;;WAEA,mBAAmB;WACnB;;;wBAIK,aAAa;WAA2B;WAAuB;MAAmB;;wBA+BlF,gBAAgB,gBAAgB,WAAW,iBAAiB,YAAY;;UC9CvE;;WAEN;;WAEA;;WAEA;;;UAIM;;WAEN;WACA;;;;;;;;wBAoBK,aAAa,cAAc;;;;;;;;;;wBAsC3B,aAAa,gBAAgB,eAAe,wBAAwB;;UCnEnE;WACN;WACA,SAAS;WACT,SAAS;;;qBAIP;;wBA8NG,OAAO,yBAAyB,IAAI"}

package/build/index.js

@@ -1 +1 @@
-export { f as DRY_RUN_TIMEOUT_MINUTES, t as HELP, p as REPORT_DIR, g as STRYKER_OWNED, m as TIMEOUT_MS, _ as changedFiles, a as compareDisables, o as findDisables, s as formatScore, r as isConfigFile, c as isHitLimit, i as leavingPaths, v as parseLane, l as parseReport, y as partErrors, n as runCli, b as runSelections, u as scoreReport, x as select, S as selectionNames, h as strykerConfig, d as summaryMarkdown } from "./run-DDLcArjy.js";
+export { f as DRY_RUN_TIMEOUT_MINUTES, t as HELP, p as REPORT_DIR, g as STRYKER_OWNED, m as TIMEOUT_MS, _ as changedFiles, a as compareDisables, o as findDisables, s as formatScore, r as isConfigFile, c as isHitLimit, i as leavingPaths, v as parseLane, l as parseReport, y as partErrors, n as runCli, b as runSelections, u as scoreReport, x as select, S as selectionNames, h as strykerConfig, d as summaryMarkdown } from "./run-COJdkfIk.js";

package/build/{run-DDLcArjy.js → run-COJdkfIk.js}

@@ -13,6 +13,8 @@ const STRYKER_OWNED = [
 ];
 const NAME = /^[\w-]+$/;
 const isRecord = (x) => typeof x === "object" && x !== null && !Array.isArray(x);
+/** This function tells if a value is an object of names, each with a reason that is not empty. */
+const isReasons = (x) => isRecord(x) && Object.values(x).every((r) => typeof r === "string" && r.trim() !== "");
 const isGlobs = (x) => Array.isArray(x) && x.length > 0 && x.every((g) => typeof g === "string" && g !== "");
 /** This function examines a package of the lane file. It gives the errors, with the name of the package. */
 function packageErrors(name, p) {
@@ -37,6 +39,7 @@ function packageErrors(name, p) {
 			if (owned.length > 0) errors.push(`${name}: "stryker" has ${owned.map((k) => `"${k}"`).join(", ")}, but the lane owns these keys`);
 		}
 	}
+	if (p["notRead"] !== void 0 && !isReasons(p["notRead"])) errors.push(`${name}: "notRead" is not an object of files, each with a reason`);
 	const parts = p["parts"];
 	if (parts !== void 0) {
 		if (!isRecord(parts) || Object.keys(parts).length === 0) errors.push(`${name}: "parts" is not an object with parts`);
@@ -57,8 +60,16 @@ function parseLane(json) {
 	const errors = Object.entries(json["packages"]).flatMap(([name, p]) => packageErrors(name, p));
 	if (Object.keys(json["packages"]).length === 0) errors.push(`the lane has no packages`);
 	if (json["disables"] !== void 0 && typeof json["disables"] !== "string") errors.push(`"disables" is not a file name`);
+	const fall = json["maxTestFall"];
+	if (fall !== void 0 && (typeof fall !== "number" || !(fall >= 0 && fall <= 100))) errors.push(`"maxTestFall" is not a percent from 0 to 100`);
+	const planned = json["plannedFalls"];
+	if (planned !== void 0 && !isReasons(planned)) errors.push(`"plannedFalls" is not an object of selections, each with a reason`);
 	if (errors.length > 0) throw new Error(`the lane is not valid:\n  ${errors.join("\n  ")}`);
-	return json;
+	const lane = json;
+	const names = new Set(selectionNames(lane));
+	const unknown = Object.keys(lane.plannedFalls ?? {}).filter((n) => !names.has(n));
+	if (unknown.length > 0) throw new Error(`the lane is not valid:\n  "plannedFalls" names no selection of the lane: ${unknown.join(", ")}`);
+	return lane;
 }
 /** This function gives the names of all the selections of a lane: each package, then each part of the package. */
 function selectionNames(lane) {
@@ -197,8 +208,53 @@ function parseReport(json) {
 	const files = typeof json === "object" && json !== null ? json.files : void 0;
 	if (typeof files !== "object" || files === null) throw new Error(`the report has no object "files"`);
 	for (const [file, data] of Object.entries(files)) if (!Array.isArray(data?.mutants)) throw new Error(`the report has no list "mutants" for ${file}`);
+	const testFiles = json.testFiles;
+	if (testFiles !== void 0) {
+		if (typeof testFiles !== "object" || testFiles === null) throw new Error(`the field "testFiles" of the report is not an object`);
+		for (const [file, data] of Object.entries(testFiles)) if (!Array.isArray(data?.tests)) throw new Error(`the report has no list "tests" for the test file ${file}`);
+	}
 	return json;
 }
+/** This function gives the count of the tests of a report, or undefined when the report has no `testFiles`. */
+function testCount(report) {
+	if (report.testFiles === void 0) return void 0;
+	return Object.values(report.testFiles).reduce((sum, f) => sum + f.tests.length, 0);
+}
+/**
+* This function compares a test count with the last good count. It gives the reason of a failure when the count fell
+* by more than `maxFall` percent, else undefined. A report that reads fewer tests is no read of the score.
+*
+* @param maxFall - the highest fall in percent that passes
+*/
+function testFall(tests, last, maxFall) {
+	if (last <= 0 || tests >= last) return void 0;
+	const fall = 100 * (last - tests) / last;
+	if (fall <= maxFall) return void 0;
+	return `the run read ${String(tests)} tests, ${fall.toFixed(1)} % fewer than the last good count ${String(last)} (the limit is ${String(maxFall)} %), so the score is no read`;
+}
+/**
+* This function gives each test file on the disk that the report does not read, and that `notRead` does not name.
+* The files of the report and of the disk are from the folder of the package.
+*
+* @param onDisk - the test files of the package, from its folder, with `/`
+* @param dir - the folder of the package, to make a full path of the report relative
+*/
+function unreadTestFiles(report, onDisk, notRead = {}, dir = "") {
+	const root = dir.replaceAll("\\", "/").replace(/\/?$/, "/");
+	const read = new Set(Object.keys(report.testFiles ?? {}).map((f) => {
+		const file = f.replaceAll("\\", "/");
+		return dir !== "" && file.startsWith(root) ? file.slice(root.length) : file.replace(/^\.\//, "");
+	}));
+	return onDisk.filter((f) => !read.has(f) && notRead[f] === void 0);
+}
+/** This function gives a score that fails for a reason. A score that failed already keeps its first reason, and gets the new one after it. */
+function failScore(score, reason) {
+	return {
+		...score,
+		pass: false,
+		reason: score.reason === void 0 ? reason : `${score.reason}. Also ${reason}`
+	};
+}
 /**
 * This function gives the score of a report and applies the gate. A report with no mutants that count fails, also
 * without a gate: Stryker found no files. A report with mutants that count and none detected also fails: the test
@@ -239,6 +295,7 @@ function scoreReport(report, selection) {
 		survived,
 		percent,
 		percentWithClock,
+		tests: testCount(report),
 		pass: reason === void 0,
 		reason
 	};
@@ -250,14 +307,15 @@ function formatScore(s) {
 	const gate = s.gate === void 0 ? "no gate" : `gate ${String(s.gate)} %`;
 	const result = s.pass ? "pass" : `FAIL: ${s.reason ?? ""}`;
 	const time = s.hitLimit + s.clockTimeouts === 0 ? "" : `, ${timeouts(s)}`;
-	return `${s.name}: ${s.percent.toFixed(2)} % (${String(s.detected)} of ${String(s.valid)}, ${String(s.survived.length)} survived${time}), ${gate}: ${result}`;
+	const tests = s.tests === void 0 ? "" : `, ${String(s.tests)} tests`;
+	return `${s.name}: ${s.percent.toFixed(2)} % (${String(s.detected)} of ${String(s.valid)}, ${String(s.survived.length)} survived${time}${tests}), ${gate}: ${result}`;
 }
 /** This function gives a Markdown table of scores, for the summary of a CI job. */
 function summaryMarkdown(scores) {
 	return [
-		"| Selection | Score | Detected | Valid | Survived | Clock time-outs | Score with them | Gate | Result |",
-		"| --- | ---: | ---: | ---: | ---: | ---: | ---: | ---: | --- |",
-		...scores.map((s) => `| ${s.name} | ${s.percent.toFixed(2)} % | ${String(s.detected)} | ${String(s.valid)} | ${String(s.survived.length)} | ${String(s.clockTimeouts)} | ${s.percentWithClock.toFixed(2)} % | ${s.gate === void 0 ? "none" : `${String(s.gate)} %`} | ${s.pass ? "pass" : `fail: ${s.reason ?? ""}`} |`),
+		"| Selection | Score | Detected | Valid | Survived | Clock time-outs | Score with them | Gate | Result | Tests |",
+		"| --- | ---: | ---: | ---: | ---: | ---: | ---: | ---: | --- | ---: |",
+		...scores.map((s) => `| ${s.name} | ${s.percent.toFixed(2)} % | ${String(s.detected)} | ${String(s.valid)} | ${String(s.survived.length)} | ${String(s.clockTimeouts)} | ${s.percentWithClock.toFixed(2)} % | ${s.gate === void 0 ? "none" : `${String(s.gate)} %`} | ${s.pass ? "pass" : `fail: ${s.reason ?? ""}`} | ${s.tests === void 0 ? "?" : String(s.tests)} |`),
 		""
 	].join("\n");
 }
@@ -403,8 +461,14 @@ const HELP = `rigor-mutation: the mutation tests of a repository, with Stryker a
                                                the Stryker config of a selection, as JSON. With --dry-run,
                                                Stryker starts only the tests. With --changed, it mutates only
                                                the changed files of the selection.
-  rigor-mutation scores <selection>... [--report <file>] [--summary <file>]
-                                               the score of each selection, with its gate
+  rigor-mutation scores <selection>... [--report <file>] [--summary <file>] [--last <file>]
+                       [--write-last <file>] [--test-files]
+                                               the score of each selection, with its gate and its count
+                                               of tests. With --last, a fall of the count of more than
+                                               maxTestFall % (default 20) against the file fails. With
+                                               --write-last, the counts of the passed selections go in
+                                               the file. With --test-files, a test file on the disk that
+                                               the report does not read fails.
   rigor-mutation disables [--write]            compare the disable comments with their list
   rigor-mutation load-check [<selection>...]   refuse each relative path of a package that leaves its folder.
                                                Stryker starts the tests in a copy of the folder, so such a
@@ -509,6 +573,97 @@ function disables(lane, laneDir, write, io) {
 	if (check.added.length > 0 || check.removed.length > 0) io.stderr("disables: the sources and the list are not the same. Add each new disable with its reason, or start with --write and examine the diff.\n");
 	return check.ok ? 0 : 1;
 }
+/**
+* This function gives the score of each selection (`scores`). With `last`, it compares the test count with the last
+* good count (LANE.TESTS of Vex). With `testFiles`, it compares the test files on the disk with the report (LANE.FILES).
+*/
+function scores(lane, laneDir, names, o, io) {
+	if (names.length === 0) throw new Error(`"scores" takes one or more selections`);
+	if (o.report !== void 0 && names.length > 1) throw new Error(`--report takes one selection`);
+	checkPartsOf(lane, laneDir, names);
+	const lastFile = o.last === void 0 ? void 0 : resolve(io.cwd, o.last);
+	const last = lastFile === void 0 || !existsSync(lastFile) ? {} : readCounts(lastFile);
+	if (lastFile !== void 0 && !existsSync(lastFile)) io.stdout(`scores: the file ${o.last ?? ""} does not exist, so no count is compared
+`);
+	const notes = new Map(names.map((n) => [n, []]));
+	const note = (name, line) => void notes.get(name)?.push(line);
+	const results = names.map((name) => {
+		const s = select(lane, name);
+		const file = o.report === void 0 ? resolve(laneDir, s.dir, REPORT_DIR, "mutation.json") : resolve(io.cwd, o.report);
+		if (!existsSync(file)) {
+			const reason = `the report ${relative(io.cwd, file)} does not exist`;
+			return {
+				name,
+				gate: s.gate,
+				detected: 0,
+				hitLimit: 0,
+				clockTimeouts: 0,
+				valid: 0,
+				survived: [],
+				percent: 0,
+				percentWithClock: 0,
+				tests: void 0,
+				pass: false,
+				reason
+			};
+		}
+		const report = parseReport(readJson(file));
+		let score = scoreReport(report, s);
+		const before = last[name];
+		if (lastFile !== void 0 && before !== void 0) {
+			if (score.tests === void 0) score = failScore(score, `the report has no "testFiles", so the count of the tests is not known`);
+			else {
+				const fall = testFall(score.tests, before, lane.maxTestFall ?? 20);
+				const planned = lane.plannedFalls?.[name];
+				if (fall !== void 0 && planned === void 0) score = failScore(score, fall);
+				else if (fall !== void 0) note(name, `  a planned fall: ${fall.replace(/, so the score is no read$/, "")}. The reason: ${planned ?? ""}`);
+			}
+		}
+		if (o.testFiles) score = checkTestFiles(lane, laneDir, s.pkg, report, score, (line) => note(name, line));
+		return score;
+	});
+	for (const s of results) {
+		io.stdout(`${formatScore(s)}
+`);
+		for (const line of notes.get(s.name) ?? []) io.stdout(`${line}
+`);
+		if (!s.pass) for (const m of s.survived) io.stdout(`  survived: ${m}
+`);
+	}
+	if (o.summary !== void 0) appendFileSync(resolve(io.cwd, o.summary), `### Mutation scores
+
+${summaryMarkdown(results)}
+`);
+	if (o.writeLast !== void 0) {
+		const out = resolve(io.cwd, o.writeLast);
+		const counts = { ...existsSync(out) ? readCounts(out) : {} };
+		for (const s of results) if (s.pass && s.tests !== void 0) counts[s.name] = s.tests;
+		mkdirSync(dirname(out), { recursive: true });
+		writeFileSync(out, `${JSON.stringify(Object.fromEntries(Object.entries(counts).toSorted(([a], [b]) => a < b ? -1 : 1)), null, 2)}
+`);
+	}
+	const failed = results.filter((s) => !s.pass).map((s) => s.name);
+	if (failed.length > 0) io.stderr(`The gate failed for ${failed.join(", ")}.
+`);
+	return failed.length > 0 ? 1 : 0;
+}
+/** This function reads a file of test counts: an object from each selection to its count. */
+function readCounts(file) {
+	const json = readJson(file);
+	if (!(typeof json === "object" && json !== null && !Array.isArray(json) && Object.values(json).every((n) => Number.isInteger(n) && n >= 0))) throw new Error(`the file ${file} is not an object of test counts`);
+	return json;
+}
+/** This function fails a score when a test file of its package is on the disk and the report does not read it. */
+function checkTestFiles(lane, laneDir, pkg, report, score, note) {
+	const p = lane.packages[pkg];
+	if (p === void 0) return score;
+	const dir = resolve(laneDir, p.dir);
+	if (report.testFiles === void 0) return failScore(score, `the report has no "testFiles", so the test files that it read are not known`);
+	const unread = unreadTestFiles(report, sourcesOf(dir, dir, true).filter((f) => TEST.test(f) && !f.endsWith(".d.ts")), p.notRead, dir);
+	for (const f of unread) note(`  not read: ${p.dir}/${f}`);
+	if (unread.length === 0) return score;
+	return failScore(score, `the report does not read ${String(unread.length)} test files on the disk. Each one is no read, unless "notRead" of the package gives its reason`);
+}
 /** This function starts the CLI with its arguments and gives the exit code. */
 function runCli(argv, io) {
 	const { values, positionals } = parseArgs({
@@ -536,6 +691,12 @@ function runCli(argv, io) {
 				default: false
 			},
 			changed: { type: "string" },
+			last: { type: "string" },
+			"write-last": { type: "string" },
+			"test-files": {
+				type: "boolean",
+				default: false
+			},
 			help: {
 				type: "boolean",
 				default: false
@@ -590,40 +751,13 @@ function runCli(argv, io) {
 			}
 			return 0;
 		}
-		case "scores": {
-			if (names.length === 0) throw new Error(`"scores" takes one or more selections`);
-			if (values.report !== void 0 && names.length > 1) throw new Error(`--report takes one selection`);
-			checkPartsOf(lane, laneDir, names);
-			const scores = names.map((name) => {
-				const s = select(lane, name);
-				const file = values.report === void 0 ? resolve(laneDir, s.dir, REPORT_DIR, "mutation.json") : resolve(io.cwd, values.report);
-				if (!existsSync(file)) {
-					const reason = `the report ${relative(io.cwd, file)} does not exist`;
-					return {
-						name,
-						gate: s.gate,
-						detected: 0,
-						hitLimit: 0,
-						clockTimeouts: 0,
-						valid: 0,
-						survived: [],
-						percent: 0,
-						percentWithClock: 0,
-						pass: false,
-						reason
-					};
-				}
-				return scoreReport(parseReport(readJson(file)), s);
-			});
-			for (const s of scores) {
-				io.stdout(`${formatScore(s)}\n`);
-				if (!s.pass) for (const m of s.survived) io.stdout(`  survived: ${m}\n`);
-			}
-			if (values.summary !== void 0) appendFileSync(resolve(io.cwd, values.summary), `### Mutation scores\n\n${summaryMarkdown(scores)}\n`);
-			const failed = scores.filter((s) => !s.pass).map((s) => s.name);
-			if (failed.length > 0) io.stderr(`The gate failed for ${failed.join(", ")}.\n`);
-			return failed.length > 0 ? 1 : 0;
-		}
+		case "scores": return scores(lane, laneDir, names, {
+			report: values.report,
+			summary: values.summary,
+			last: values.last,
+			writeLast: values["write-last"],
+			testFiles: values["test-files"]
+		}, io);
 		case "disables": return disables(lane, laneDir, values.write, io);
 		case "load-check": return loadCheck(lane, laneDir, names, io);
 		default:
@@ -633,4 +767,4 @@ function runCli(argv, io) {
 }
 export { selectionNames as S, changedFiles as _, compareDisables as a, runSelections as b, isHitLimit as c, summaryMarkdown as d, DRY_RUN_TIMEOUT_MINUTES as f, STRYKER_OWNED as g, strykerConfig as h, leavingPaths as i, parseReport as l, TIMEOUT_MS as m, runCli as n, findDisables as o, REPORT_DIR as p, isConfigFile as r, formatScore as s, HELP as t, scoreReport as u, parseLane as v, select as x, partErrors as y };
 
-//# sourceMappingURL=run-DDLcArjy.js.map
+//# sourceMappingURL=run-COJdkfIk.js.map

package/build/run-COJdkfIk.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"run-COJdkfIk.js","names":["TEST"],"sources":["../src/lane.ts","../src/config.ts","../src/score.ts","../src/disables.ts","../src/load.ts","../src/run.ts"],"sourcesContent":["import { matchesGlob, posix } from \"node:path\";\n\n/**\n * The lane file of a repository (`mutation.json`) names the packages that the mutation tests mutate. A package has\n * its folder, its globs and an optional gate. A big package has parts, so that each part has its own runner.\n */\n\n/** The mutation tests of one package. */\nexport interface PackageLane {\n  /** This field gives the folder of the package, from the folder of the lane file. Stryker starts in this folder. */\n  readonly dir: string;\n  /** These globs give the files to mutate, from `dir`. A glob with `!` removes the files of the globs before it. */\n  readonly mutate: readonly string[];\n  /**\n   * Each part has its own globs. The `!` globs of `mutate` also apply to each part. Each file of `mutate` must be in\n   * exactly one part, so that a full run mutates each file one time. `partErrors` examines this.\n   */\n  readonly parts?: Readonly<Record<string, readonly string[]>>;\n  /** This field gives the lowest mutation score in percent that passes. Without a gate, the lane only reports the score. */\n  readonly gate?: number;\n  /** This field gives the Vitest config file, from `dir`. Without it, Vitest finds its config in `dir`. */\n  readonly vitestConfig?: string;\n  /**\n   * This field gives the time in milliseconds that the clock adds to the time of the tests for each mutant. The\n   * default is 120000. A short time on a loaded runner stops mutants that the tests detect later.\n   */\n  readonly timeoutMS?: number;\n  /** This field gives the time in minutes for the run of the tests without mutants. The default is 15. */\n  readonly dryRunTimeoutMinutes?: number;\n  /**\n   * These options go into the Stryker config of each selection of the package, for example `ignoreStatic`. The lane\n   * owns the keys of `STRYKER_OWNED`, so the field cannot have them.\n   */\n  readonly stryker?: Readonly<Record<string, unknown>>;\n  /**\n   * Each test file of this field is on the disk, and no report reads it. The value gives the reason. `scores\n   * --test-files` fails for each other test file on the disk that the report does not read. The file is from `dir`.\n   */\n  readonly notRead?: Readonly<Record<string, string>>;\n}\n\n/** The keys of the Stryker config that the lane owns. The field `stryker` of a package cannot have them. */\nexport const STRYKER_OWNED: readonly string[] = [\"mutate\", \"thresholds\", \"jsonReporter\", \"htmlReporter\", \"timeoutMS\", \"dryRunTimeoutMinutes\"];\n\n/** The lane file: the packages of the mutation tests, and the list of the disabled mutants. */\nexport interface Lane {\n  readonly packages: Readonly<Record<string, PackageLane>>;\n  /** This field gives the list of the disabled mutants, from the folder of the lane file. The default is `mutation-disables.json`. */\n  readonly disables?: string;\n  /**\n   * This field gives the highest fall of the test count in percent against the last good count. The default is 20.\n   * `scores --last` fails a selection with a higher fall: the report did not read all the tests.\n   */\n  readonly maxTestFall?: number;\n  /** Each selection of this field can have a higher fall of its test count. The value gives the reason. */\n  readonly plannedFalls?: Readonly<Record<string, string>>;\n}\n\n/** The default of `maxTestFall` of the lane, in percent. */\nexport const MAX_TEST_FALL = 20;\n\n/** A selection is one Stryker run: a package (`collections`) or a part of a package (`collections.impl`). */\nexport interface Selection {\n  readonly name: string;\n  readonly pkg: string;\n  readonly dir: string;\n  readonly mutate: readonly string[];\n  readonly gate: number | undefined;\n  readonly vitestConfig: string | undefined;\n  readonly timeoutMS: number | undefined;\n  readonly dryRunTimeoutMinutes: number | undefined;\n  readonly stryker: Readonly<Record<string, unknown>> | undefined;\n}\n\nconst NAME = /^[\\w-]+$/;\n\nconst isRecord = (x: unknown): x is Record<string, unknown> => typeof x === \"object\" && x !== null && !Array.isArray(x);\n\n/** This function tells if a value is an object of names, each with a reason that is not empty. */\nconst isReasons = (x: unknown): x is Record<string, string> => isRecord(x) && Object.values(x).every((r) => typeof r === \"string\" && r.trim() !== \"\");\n\nconst isGlobs = (x: unknown): x is string[] => Array.isArray(x) && x.length > 0 && x.every((g) => typeof g === \"string\" && g !== \"\");\n\n/** This function examines a package of the lane file. It gives the errors, with the name of the package. */\nfunction packageErrors(name: string, p: unknown): string[] {\n  if (!NAME.test(name)) return [`the package name \"${name}\" has a character that is not a letter, a digit, \"_\" or \"-\"`];\n  if (!isRecord(p)) return [`${name}: the package is not an object`];\n  const errors: string[] = [];\n  if (typeof p[\"dir\"] !== \"string\" || p[\"dir\"] === \"\") errors.push(`${name}: \"dir\" is not a folder name`);\n  if (!isGlobs(p[\"mutate\"])) errors.push(`${name}: \"mutate\" is not a list of globs`);\n  else if (p[\"mutate\"].every((g) => g.startsWith(\"!\"))) errors.push(`${name}: \"mutate\" has only \"!\" globs`);\n  const gate = p[\"gate\"];\n  if (gate !== undefined && (typeof gate !== \"number\" || !(gate >= 0 && gate <= 100))) errors.push(`${name}: \"gate\" is not a percent from 0 to 100`);\n  if (p[\"vitestConfig\"] !== undefined && typeof p[\"vitestConfig\"] !== \"string\") errors.push(`${name}: \"vitestConfig\" is not a file name`);\n  for (const field of [\"timeoutMS\", \"dryRunTimeoutMinutes\"]) {\n    const v = p[field];\n    if (v !== undefined && !(typeof v === \"number\" && Number.isInteger(v) && v > 0)) errors.push(`${name}: \"${field}\" is not a positive integer`);\n  }\n  const stryker = p[\"stryker\"];\n  if (stryker !== undefined) {\n    if (!isRecord(stryker)) errors.push(`${name}: \"stryker\" is not an object`);\n    else {\n      const owned = Object.keys(stryker).filter((k) => STRYKER_OWNED.includes(k));\n      if (owned.length > 0) errors.push(`${name}: \"stryker\" has ${owned.map((k) => `\"${k}\"`).join(\", \")}, but the lane owns these keys`);\n    }\n  }\n  if (p[\"notRead\"] !== undefined && !isReasons(p[\"notRead\"])) errors.push(`${name}: \"notRead\" is not an object of files, each with a reason`);\n  const parts = p[\"parts\"];\n  if (parts !== undefined) {\n    if (!isRecord(parts) || Object.keys(parts).length === 0) errors.push(`${name}: \"parts\" is not an object with parts`);\n    else {\n      for (const [part, globs] of Object.entries(parts)) {\n        if (!NAME.test(part)) errors.push(`${name}: the part name \"${part}\" has a character that is not a letter, a digit, \"_\" or \"-\"`);\n        if (!isGlobs(globs) || globs.some((g) => g.startsWith(\"!\"))) errors.push(`${name}.${part}: the part is not a list of globs without \"!\"`);\n      }\n    }\n  }\n  return errors;\n}\n\n/**\n * This function examines the JSON of a lane file and gives the lane.\n *\n * @throws Error with each problem of the file\n */\nexport function parseLane(json: unknown): Lane {\n  if (!isRecord(json) || !isRecord(json[\"packages\"])) throw new Error(`the lane has no object \"packages\"`);\n  const errors = Object.entries(json[\"packages\"]).flatMap(([name, p]) => packageErrors(name, p));\n  if (Object.keys(json[\"packages\"]).length === 0) errors.push(`the lane has no packages`);\n  if (json[\"disables\"] !== undefined && typeof json[\"disables\"] !== \"string\") errors.push(`\"disables\" is not a file name`);\n  const fall = json[\"maxTestFall\"];\n  if (fall !== undefined && (typeof fall !== \"number\" || !(fall >= 0 && fall <= 100))) errors.push(`\"maxTestFall\" is not a percent from 0 to 100`);\n  const planned = json[\"plannedFalls\"];\n  if (planned !== undefined && !isReasons(planned)) errors.push(`\"plannedFalls\" is not an object of selections, each with a reason`);\n  if (errors.length > 0) throw new Error(`the lane is not valid:\\n  ${errors.join(\"\\n  \")}`);\n  const lane = json as unknown as Lane;\n  const names = new Set(selectionNames(lane));\n  const unknown = Object.keys(lane.plannedFalls ?? {}).filter((n) => !names.has(n));\n  if (unknown.length > 0) throw new Error(`the lane is not valid:\\n  \"plannedFalls\" names no selection of the lane: ${unknown.join(\", \")}`);\n  return lane;\n}\n\n/** This function gives the names of all the selections of a lane: each package, then each part of the package. */\nexport function selectionNames(lane: Lane): string[] {\n  return Object.entries(lane.packages).flatMap(([name, p]) => [name, ...Object.keys(p.parts ?? {}).map((part) => `${name}.${part}`)]);\n}\n\n/** This function gives the selections of a full run: the parts of each package with parts, else the package. Each file is in one run. */\nexport function runSelections(lane: Lane): string[] {\n  return Object.entries(lane.packages).flatMap(([name, p]) => (p.parts === undefined ? [name] : Object.keys(p.parts).map((part) => `${name}.${part}`)));\n}\n\n/**\n * This function gives the selection of a name: a package, or a part of a package.\n *\n * @throws Error when the lane has no package or part of that name\n */\nexport function select(lane: Lane, name: string): Selection {\n  const [pkg = \"\", part, ...rest] = name.split(\".\");\n  const p = lane.packages[pkg];\n  const globs = part === undefined ? undefined : p?.parts?.[part];\n  if (p === undefined || rest.length > 0 || (part !== undefined && globs === undefined)) {\n    throw new Error(`the lane has no package or part \"${name}\". It has: ${selectionNames(lane).join(\", \")}`);\n  }\n  // Stryker applies a \"!\" glob to the globs before it, so the \"!\" globs of the package go after the globs of the part.\n  const mutate = globs === undefined ? p.mutate : [...globs, ...p.mutate.filter((g) => g.startsWith(\"!\"))];\n  return { name, pkg, dir: p.dir, mutate, gate: p.gate, vitestConfig: p.vitestConfig, timeoutMS: p.timeoutMS, dryRunTimeoutMinutes: p.dryRunTimeoutMinutes, stryker: p.stryker };\n}\n\n/**\n * This function tells if globs select a file. It reads the globs as Stryker does. A glob adds its files. A glob with\n * `!` removes its files from the files of the globs before it.\n */\nexport function globsSelect(globs: readonly string[], file: string): boolean {\n  let selected = false;\n  for (const g of globs) {\n    if (g.startsWith(\"!\")) {\n      if (selected && matchesGlob(file, g.slice(1))) selected = false;\n    } else if (!selected && matchesGlob(file, g)) selected = true;\n  }\n  return selected;\n}\n\n/**\n * This function gives the changed files of a selection, from the folder of its package. The globs of the selection\n * select the files.\n *\n * @param changed - the changed paths, from the folder of the lane file, with `/`\n */\nexport function changedFiles(selection: Selection, changed: readonly string[]): string[] {\n  const dir = posix.normalize(selection.dir.replaceAll(\"\\\\\", \"/\"));\n  return changed\n    .map((f) => posix.relative(dir, posix.normalize(f.replaceAll(\"\\\\\", \"/\"))))\n    .filter((f) => f !== \"\" && !f.startsWith(\"../\") && !posix.isAbsolute(f) && globsSelect(selection.mutate, f));\n}\n\n/**\n * This function examines the parts of a package against its files. It gives an error for each file of `mutate` in no\n * part. It also gives an error for each file in two parts, and for each file of a part that is not in `mutate`. A\n * package with no parts has no errors.\n *\n * @param files - the source files of the package, from its folder, with `/`\n */\nexport function partErrors(lane: Lane, pkg: string, files: readonly string[]): string[] {\n  const p = lane.packages[pkg];\n  if (p?.parts === undefined) return [];\n  const parts = Object.keys(p.parts).map((part) => ({ part, mutate: select(lane, `${pkg}.${part}`).mutate }));\n  const errors: string[] = [];\n  for (const file of files) {\n    const inMutate = globsSelect(p.mutate, file);\n    const inParts = parts.filter((x) => globsSelect(x.mutate, file)).map((x) => x.part);\n    if (inMutate && inParts.length === 0) errors.push(`${pkg}: the file ${file} is in no part, so a full run does not mutate it`);\n    else if (inParts.length > 1) errors.push(`${pkg}: the file ${file} is in more than one part: ${inParts.join(\", \")}`);\n    else if (!inMutate && inParts.length === 1) errors.push(`${pkg}: the file ${file} is in the part ${inParts.join(\"\")}, but not in \"mutate\"`);\n  }\n  return errors;\n}\n","import type { Selection } from \"./lane.ts\";\n\n/** The options of `strykerConfig`. */\nexport interface ConfigOptions {\n  /** This option gives the number of test processes. The default is 2. */\n  readonly concurrency?: number;\n  /** This option gives the folder of the reports, from the folder of the package. The default is `reports/mutation`. */\n  readonly reportDir?: string;\n  /**\n   * When this option is true, Stryker starts only the tests without mutants, and it does not stop at the first failed\n   * test. Use it to see if the tests pass under Stryker before a long run.\n   */\n  readonly dryRun?: boolean;\n}\n\n/** The Stryker config of one selection, as JSON. Stryker starts in the folder of the package. The field `stryker` of the lane adds keys. */\nexport interface StrykerConfig {\n  readonly [key: string]: unknown;\n  readonly testRunner: \"vitest\";\n  readonly plugins: readonly string[];\n  readonly vitest?: { readonly configFile: string };\n  readonly mutate: readonly string[];\n  readonly coverageAnalysis: \"perTest\";\n  readonly reporters: readonly string[];\n  readonly htmlReporter: { readonly fileName: string };\n  readonly jsonReporter: { readonly fileName: string };\n  readonly thresholds: { readonly high: number; readonly low: number; readonly break: null };\n  readonly concurrency: number;\n  readonly timeoutMS: number;\n  readonly dryRunTimeoutMinutes: number;\n  readonly dryRunOnly?: true;\n  readonly disableBail?: true;\n}\n\n/** The default folder of the reports, from the folder of the package. */\nexport const REPORT_DIR = \"reports/mutation\";\n\n/**\n * The default time in milliseconds that the clock adds to the time of the tests for each mutant. The default of\n * Stryker is 5000. On a loaded CI runner that time stopped mutants that the tests detected later.\n */\nexport const TIMEOUT_MS = 120_000;\n\n/** The default time in minutes for the run of the tests without mutants. The default of Stryker is 5. */\nexport const DRY_RUN_TIMEOUT_MINUTES = 15;\n\n/**\n * This function gives the Stryker config of a selection. The break of Stryker is off, because the gate of each\n * package is in `scoreReport`. Stryker 10.1.0 or later is necessary with Vitest 5: version 10.0 started no test on each\n * mutant (stryker-js issue 6210).\n */\nexport function strykerConfig(selection: Selection, options: ConfigOptions = {}): StrykerConfig {\n  const reportDir = options.reportDir ?? REPORT_DIR;\n  const low = selection.gate ?? 60;\n  return {\n    testRunner: \"vitest\",\n    plugins: [\"@stryker-mutator/vitest-runner\"],\n    ...(selection.vitestConfig === undefined ? {} : { vitest: { configFile: selection.vitestConfig } }),\n    mutate: selection.mutate,\n    coverageAnalysis: \"perTest\",\n    reporters: [\"clear-text\", \"progress\", \"html\", \"json\"],\n    htmlReporter: { fileName: `${reportDir}/index.html` },\n    jsonReporter: { fileName: `${reportDir}/mutation.json` },\n    thresholds: { high: Math.max(low, 90), low, break: null },\n    concurrency: options.concurrency ?? 2,\n    timeoutMS: selection.timeoutMS ?? TIMEOUT_MS,\n    dryRunTimeoutMinutes: selection.dryRunTimeoutMinutes ?? DRY_RUN_TIMEOUT_MINUTES,\n    // The keys of the lane field \"stryker\" replace the keys above, but \"--concurrency\" replaces its \"concurrency\".\n    ...selection.stryker,\n    ...(options.concurrency === undefined ? {} : { concurrency: options.concurrency }),\n    ...(options.dryRun === true ? { dryRunOnly: true, disableBail: true } : {}),\n  };\n}\n","/**\n * The score of a Stryker report, with the gate of the package. The score counts the detected mutants, out of the\n * mutants that a test covers or that survive. Compile errors, runtime errors and ignored mutants do not count.\n *\n * Stryker gives the status `Timeout` for two events. The hit limit stops a mutant with an endless loop: its\n * `statusReason` starts with `Hit limit`, and the mutant is detected. The clock stops a mutant that took too long. The\n * load of the runner can cause this. Thus the mutant is not detected for certain, and it counts as not detected.\n */\n\n/** A mutant of the JSON report of Stryker (the schema of mutation-testing-elements). */\nexport interface Mutant {\n  readonly status: string;\n  readonly mutatorName: string;\n  /** Stryker gives the reason of some statuses here. A `Timeout` of the hit limit has a reason that starts with `Hit limit`. */\n  readonly statusReason?: string | undefined;\n  readonly location: { readonly start: { readonly line: number } };\n}\n\n/** The JSON report of Stryker: the mutants of each mutated file, and the tests of each test file that the run read. */\nexport interface MutationReport {\n  readonly files: Readonly<Record<string, { readonly mutants: readonly Mutant[] }>>;\n  /** Stryker gives this field when the test runner tells the tests, as the Vitest runner does. */\n  readonly testFiles?: Readonly<Record<string, { readonly tests: readonly { readonly name: string }[] }>> | undefined;\n}\n\n/** The score of one selection. */\nexport interface Score {\n  readonly name: string;\n  readonly gate: number | undefined;\n  /** The mutants with the status `Killed`, and the mutants that the hit limit stopped. */\n  readonly detected: number;\n  /** The mutants that the hit limit stopped. They are in `detected`. */\n  readonly hitLimit: number;\n  /** The mutants that the clock stopped. They count as not detected, and they are in `survived`. */\n  readonly clockTimeouts: number;\n  /** The mutants that count: detected, survived or with no coverage. */\n  readonly valid: number;\n  /** Each mutant that survived, had no coverage or was stopped by the clock, as `file:line Mutator`. */\n  readonly survived: readonly string[];\n  /** The score in percent. It is 0 when no mutant counts. */\n  readonly percent: number;\n  /** The score in percent with the clock time-outs counted as detected, as Stryker counts them. The gate does not read it. */\n  readonly percentWithClock: number;\n  /** The count of the tests that the run read, from `testFiles` of the report. It is undefined when the report has no `testFiles`. */\n  readonly tests: number | undefined;\n  readonly pass: boolean;\n  /** The reason of a failure. */\n  readonly reason: string | undefined;\n}\n\nconst UNDETECTED = new Set([\"Survived\", \"NoCoverage\"]);\n\n/** This function tells if the hit limit of Stryker stopped a mutant. Then the mutant has an endless loop, and it is detected. */\nexport const isHitLimit = (m: Mutant): boolean => m.status === \"Timeout\" && (m.statusReason ?? \"\").startsWith(\"Hit limit\");\n\n/**\n * This function examines the JSON of a Stryker report and gives the report.\n *\n * @throws Error when the JSON has no files with mutants\n */\nexport function parseReport(json: unknown): MutationReport {\n  const files = typeof json === \"object\" && json !== null ? (json as { files?: unknown }).files : undefined;\n  if (typeof files !== \"object\" || files === null) throw new Error(`the report has no object \"files\"`);\n  for (const [file, data] of Object.entries(files)) {\n    if (!Array.isArray((data as { mutants?: unknown } | null)?.mutants)) throw new Error(`the report has no list \"mutants\" for ${file}`);\n  }\n  const testFiles = (json as { testFiles?: unknown }).testFiles;\n  if (testFiles !== undefined) {\n    if (typeof testFiles !== \"object\" || testFiles === null) throw new Error(`the field \"testFiles\" of the report is not an object`);\n    for (const [file, data] of Object.entries(testFiles)) {\n      if (!Array.isArray((data as { tests?: unknown } | null)?.tests)) throw new Error(`the report has no list \"tests\" for the test file ${file}`);\n    }\n  }\n  return json as MutationReport;\n}\n\n/** This function gives the count of the tests of a report, or undefined when the report has no `testFiles`. */\nexport function testCount(report: MutationReport): number | undefined {\n  if (report.testFiles === undefined) return undefined;\n  return Object.values(report.testFiles).reduce((sum, f) => sum + f.tests.length, 0);\n}\n\n/**\n * This function compares a test count with the last good count. It gives the reason of a failure when the count fell\n * by more than `maxFall` percent, else undefined. A report that reads fewer tests is no read of the score.\n *\n * @param maxFall - the highest fall in percent that passes\n */\nexport function testFall(tests: number, last: number, maxFall: number): string | undefined {\n  if (last <= 0 || tests >= last) return undefined;\n  const fall = (100 * (last - tests)) / last;\n  if (fall <= maxFall) return undefined;\n  return `the run read ${String(tests)} tests, ${fall.toFixed(1)} % fewer than the last good count ${String(last)} (the limit is ${String(maxFall)} %), so the score is no read`;\n}\n\n/**\n * This function gives each test file on the disk that the report does not read, and that `notRead` does not name.\n * The files of the report and of the disk are from the folder of the package.\n *\n * @param onDisk - the test files of the package, from its folder, with `/`\n * @param dir - the folder of the package, to make a full path of the report relative\n */\nexport function unreadTestFiles(report: MutationReport, onDisk: readonly string[], notRead: Readonly<Record<string, string>> = {}, dir = \"\"): string[] {\n  const root = dir.replaceAll(\"\\\\\", \"/\").replace(/\\/?$/, \"/\");\n  const read = new Set(\n    Object.keys(report.testFiles ?? {}).map((f) => {\n      const file = f.replaceAll(\"\\\\\", \"/\");\n      return dir !== \"\" && file.startsWith(root) ? file.slice(root.length) : file.replace(/^\\.\\//, \"\");\n    }),\n  );\n  return onDisk.filter((f) => !read.has(f) && notRead[f] === undefined);\n}\n\n/** This function gives a score that fails for a reason. A score that failed already keeps its first reason, and gets the new one after it. */\nexport function failScore(score: Score, reason: string): Score {\n  return { ...score, pass: false, reason: score.reason === undefined ? reason : `${score.reason}. Also ${reason}` };\n}\n\n/**\n * This function gives the score of a report and applies the gate. A report with no mutants that count fails, also\n * without a gate: Stryker found no files. A report with mutants that count and none detected also fails: the test\n * runner started no test on the mutants. Stryker 10.0 with Vitest 5 gave this result.\n */\nexport function scoreReport(report: MutationReport, selection: { readonly name: string; readonly gate: number | undefined }): Score {\n  let detected = 0;\n  let valid = 0;\n  let hitLimit = 0;\n  let clockTimeouts = 0;\n  const survived: string[] = [];\n  for (const [file, data] of Object.entries(report.files)) {\n    for (const m of data.mutants) {\n      const at = `${file}:${String(m.location.start.line)} ${m.mutatorName}`;\n      if (m.status === \"Killed\" || isHitLimit(m)) {\n        detected++;\n        valid++;\n        if (m.status === \"Timeout\") hitLimit++;\n      } else if (m.status === \"Timeout\") {\n        clockTimeouts++;\n        valid++;\n        survived.push(`${at} (the clock stopped it)`);\n      } else if (UNDETECTED.has(m.status)) {\n        valid++;\n        survived.push(at);\n      }\n    }\n  }\n  const percent = valid === 0 ? 0 : (100 * detected) / valid;\n  const percentWithClock = valid === 0 ? 0 : (100 * (detected + clockTimeouts)) / valid;\n  const { name, gate } = selection;\n  const reason =\n    valid === 0\n      ? \"the report has no mutants that count: Stryker found no files to mutate, or it did not start\"\n      : detected === 0\n        ? `the tests detected none of the ${String(valid)} mutants: the test runner started no test on the mutants`\n        : gate !== undefined && percent < gate\n          ? `the score ${percent.toFixed(2)} % is under the gate ${String(gate)} %`\n          : undefined;\n  return { name, gate, detected, hitLimit, clockTimeouts, valid, survived, percent, percentWithClock, tests: testCount(report), pass: reason === undefined, reason };\n}\n\n/** This function gives the time-outs of a score as text: the count of each kind, and the score that counts the clock time-outs as detected. */\nconst timeouts = (s: Score): string =>\n  `time-outs: ${String(s.hitLimit)} hit limit, ${String(s.clockTimeouts)} clock (${s.percentWithClock.toFixed(2)} % with the clock time-outs as detected)`;\n\n/** This function gives one line for a score, with the name of the selection and its result. The time-outs are in it when the report has some. */\nexport function formatScore(s: Score): string {\n  const gate = s.gate === undefined ? \"no gate\" : `gate ${String(s.gate)} %`;\n  const result = s.pass ? \"pass\" : `FAIL: ${s.reason ?? \"\"}`;\n  const time = s.hitLimit + s.clockTimeouts === 0 ? \"\" : `, ${timeouts(s)}`;\n  const tests = s.tests === undefined ? \"\" : `, ${String(s.tests)} tests`;\n  return `${s.name}: ${s.percent.toFixed(2)} % (${String(s.detected)} of ${String(s.valid)}, ${String(s.survived.length)} survived${time}${tests}), ${gate}: ${result}`;\n}\n\n/** This function gives a Markdown table of scores, for the summary of a CI job. */\nexport function summaryMarkdown(scores: readonly Score[]): string {\n  const rows = scores.map(\n    (s) =>\n      `| ${s.name} | ${s.percent.toFixed(2)} % | ${String(s.detected)} | ${String(s.valid)} | ${String(s.survived.length)} | ${String(s.clockTimeouts)} | ${s.percentWithClock.toFixed(2)} % | ${s.gate === undefined ? \"none\" : `${String(s.gate)} %`} | ${s.pass ? \"pass\" : `fail: ${s.reason ?? \"\"}`} | ${s.tests === undefined ? \"?\" : String(s.tests)} |`,\n  );\n  return [\n    \"| Selection | Score | Detected | Valid | Survived | Clock time-outs | Score with them | Gate | Result | Tests |\",\n    \"| --- | ---: | ---: | ---: | ---: | ---: | ---: | ---: | --- | ---: |\",\n    ...rows,\n    \"\",\n  ].join(\"\\n\");\n}\n","/**\n * A comment `// Stryker disable next-line <Mutator>: <reason>` disables a mutant that is equivalent. The disable\n * raises the score, so each one is also in a list with its reason. These functions find the comments in the\n * sources and compare them with the list.\n */\n\n/** One disable comment of a source file. */\nexport interface Disable {\n  readonly file: string;\n  readonly comment: string;\n}\n\n/** The result of `compareDisables`. */\nexport interface DisableCheck {\n  /** The comments of the sources that are not in the list, as `file: comment`. */\n  readonly added: readonly string[];\n  /** The comments of the list that are not in the sources, as `file: comment`. */\n  readonly removed: readonly string[];\n  /** The comments with no reason after a colon. */\n  readonly noReason: readonly Disable[];\n  readonly ok: boolean;\n}\n\n/** This function finds each `Stryker disable` comment of the files. A file name uses `/`. */\nexport function findDisables(files: readonly { readonly file: string; readonly text: string }[]): Disable[] {\n  return files.flatMap(({ file, text }) =>\n    text\n      .split(\"\\n\")\n      .filter((line) => line.includes(\"Stryker disable\"))\n      .map((line) => ({ file, comment: line.trim() })),\n  );\n}\n\nconst counts = (xs: readonly Disable[]): Map<string, number> => {\n  const m = new Map<string, number>();\n  for (const x of xs) {\n    const k = `${x.file}: ${x.comment}`;\n    m.set(k, (m.get(k) ?? 0) + 1);\n  }\n  return m;\n};\n\n/**\n * This function tells if a comment has a reason: a mutator name, a colon, a space and a text. It reads the text by\n * index, so its time is linear in the length of the comment (a regular expression here was quadratic).\n */\nfunction hasReason(comment: string): boolean {\n  const start = comment.indexOf(\"Stryker disable \");\n  if (start < 0) return false;\n  const rest = comment.slice(start + \"Stryker disable \".length);\n  const colon = rest.indexOf(\":\");\n  return colon > 0 && rest[colon + 1] === \" \" && /\\S/.test(rest[colon + 2] ?? \"\");\n}\n\n/** This function compares the comments of the sources with the list. A file with the same comment two times needs it two times in the list. */\nexport function compareDisables(found: readonly Disable[], listed: readonly Disable[]): DisableCheck {\n  const noReason = found.filter((d) => !hasReason(d.comment));\n  const a = counts(found);\n  const b = counts(listed);\n  const added = [...a].filter(([k, n]) => n > (b.get(k) ?? 0)).map(([k]) => k);\n  const removed = [...b].filter(([k, n]) => n > (a.get(k) ?? 0)).map(([k]) => k);\n  return { added, removed, noReason, ok: added.length === 0 && removed.length === 0 && noReason.length === 0 };\n}\n","/**\n * The load check. Stryker copies the folder of a package to `<dir>/.stryker-tmp/sandbox-*` and starts the tests there.\n * A relative path that leaves the folder then finds no file. A test file that does not load gives no failed test, so\n * each mutant that it detects survives with no error (V-072 of Vex). This check finds these paths before Stryker. It\n * reads only the files that the run loads, so a script of the folder that no test loads can leave the folder.\n */\nimport { posix } from \"node:path\";\n\n/** A relative path in a file of a package that leaves the folder of the package. */\nexport interface LeavingPath {\n  /** The file, from the folder of the package, with `/`. */\n  readonly file: string;\n  /** The line of the path, from 1. */\n  readonly line: number;\n  /** The path as the file writes it. */\n  readonly path: string;\n}\n\n/** A file of a package and its text. */\nexport interface PackageFile {\n  /** The file, from the folder of the package, with `/`. */\n  readonly file: string;\n  readonly text: string;\n}\n\n// The paths that a module loads: import and export from, import(), require(), vi.mock() and the other vi functions,\n// and new URL(path, import.meta.url).\n// The optional \"(\" and its spaces are one group, so that each space has one match (no slow backtracking).\nconst LOADED = /(?:\\bfrom|\\bimport|\\brequire|\\bvi\\.\\w+|\\bnew\\s+URL)\\s*(?:\\(\\s*)?([\"'`])([^\"'`\\r\\n]*)\\1/g;\n// Each relative path string of a config file, for example setupFiles: [\"../testkit/setup.ts\"].\nconst CONFIG_PATH = /([\"'`])(\\.\\.?\\/[^\"'`\\r\\n]*)\\1/g;\n// A type import or export: the test runner removes it, so it loads no file.\nconst TYPE_ONLY = /^\\s*(?:import|export)\\s+type\\b/;\nconst COMMENT = /^\\s*(?:\\/\\/|\\/\\*|\\*)/;\nconst CONFIG_FILE = /(?:^|\\/)vite(?:st)?\\.(?:config|workspace)\\.[cm]?[jt]s$/;\n\n/**\n * This function tells if a file is a config file of Vitest or Vite. Each relative path string of a config file must\n * stay in the folder.\n *\n * @param vitestConfig - the field `vitestConfig` of the lane, from the folder of the package\n */\nexport function isConfigFile(file: string, vitestConfig?: string): boolean {\n  return CONFIG_FILE.test(file) || (vitestConfig !== undefined && posix.normalize(vitestConfig.replaceAll(\"\\\\\", \"/\")) === file);\n}\n\nfunction leaves(file: string, path: string): boolean {\n  if (!(path === \".\" || path === \"..\" || path.startsWith(\"./\") || path.startsWith(\"../\")) || path.includes(\"${\")) return false;\n  const target = posix.normalize(posix.join(posix.dirname(file), path));\n  return target === \"..\" || target.startsWith(\"../\");\n}\n\nconst TEST = /\\.(?:test|spec)\\.[cm]?[jt]sx?$/;\nconst EXTENSIONS = [\"\", \".ts\", \".tsx\", \".mts\", \".cts\", \".js\", \".mjs\", \".cjs\", \"/index.ts\", \"/index.js\"];\n\n/** This function gives each relative path of one file, with its line. It does not read comments and type imports. */\nfunction pathsOf(file: string, text: string, vitestConfig: string | undefined): { line: number; path: string }[] {\n  const pattern = isConfigFile(file, vitestConfig) ? CONFIG_PATH : LOADED;\n  return text.split(\"\\n\").flatMap((lineText, i) => {\n    if (COMMENT.test(lineText) || TYPE_ONLY.test(lineText)) return [];\n    return [...lineText.matchAll(pattern)].map((m) => ({ line: i + 1, path: m[2] ?? \"\" })).filter((p) => p.path.startsWith(\".\"));\n  });\n}\n\n/** This function gives the file of the package that a relative path in the folder loads, or undefined. */\nfunction target(file: string, path: string, known: ReadonlySet<string>): string | undefined {\n  const base = posix.normalize(posix.join(posix.dirname(file), path));\n  const stem = base.replace(/\\.(?:[cm]?js|jsx)$/, \"\");\n  return [...EXTENSIONS.map((e) => base + e), ...EXTENSIONS.slice(1).map((e) => stem + e)].find((f) => known.has(f));\n}\n\n/**\n * This function gives each relative path of the files that leaves the folder of the package. It reads the files that\n * the run loads. These are the test files, the config files, and each file that they load in the folder.\n * In a config file it reads each relative path string, for example a setup file. It does not read comments and type\n * imports.\n *\n * @param files - the files of the package, from its folder\n * @param vitestConfig - the field `vitestConfig` of the lane\n */\nexport function leavingPaths(files: readonly PackageFile[], vitestConfig?: string): LeavingPath[] {\n  const texts = new Map(files.map((f) => [f.file, f.text]));\n  const known = new Set(texts.keys());\n  const queue = files.map((f) => f.file).filter((f) => TEST.test(f) || isConfigFile(f, vitestConfig));\n  const loaded = new Set(queue);\n  const found: LeavingPath[] = [];\n  for (let next = queue.shift(); next !== undefined; next = queue.shift()) {\n    for (const { line, path } of pathsOf(next, texts.get(next) ?? \"\", vitestConfig)) {\n      if (leaves(next, path)) found.push({ file: next, line, path });\n      else {\n        const t = target(next, path, known);\n        if (t !== undefined && !loaded.has(t)) {\n          loaded.add(t);\n          queue.push(t);\n        }\n      }\n    }\n  }\n  return found.toSorted((a, b) => (a.file === b.file ? a.line - b.line : a.file < b.file ? -1 : 1));\n}\n","/**\n * The CLI `rigor-mutation`. The work is in `runCli`, so a test can start the CLI in a fixture folder.\n */\nimport { existsSync, mkdirSync, readdirSync, readFileSync, writeFileSync, appendFileSync } from \"node:fs\";\nimport { dirname, relative, resolve } from \"node:path\";\nimport { parseArgs } from \"node:util\";\nimport { REPORT_DIR, strykerConfig } from \"./config.ts\";\nimport { compareDisables, findDisables, type Disable } from \"./disables.ts\";\nimport { leavingPaths } from \"./load.ts\";\nimport { changedFiles, MAX_TEST_FALL, parseLane, partErrors, runSelections, select, selectionNames, type Lane } from \"./lane.ts\";\nimport { failScore, formatScore, parseReport, scoreReport, summaryMarkdown, testFall, unreadTestFiles, type MutationReport, type Score } from \"./score.ts\";\n\n/** The input and the output of the CLI. */\nexport interface CliIo {\n  readonly cwd: string;\n  readonly stdout: (text: string) => void;\n  readonly stderr: (text: string) => void;\n}\n\n/** The help text of the CLI. */\nexport const HELP: string = `rigor-mutation: the mutation tests of a repository, with Stryker and a gate for each package.\n\n  rigor-mutation list [--runs] [--changed <file>]\n                                               the packages and the parts of the lane. With --runs, the\n                                               selections of a full run: the parts of a package with parts.\n                                               With --changed, only the runs with a changed file.\n  rigor-mutation dir <selection>               the folder of the package of a selection\n  rigor-mutation config <selection> [--out <file>] [--concurrency <n>] [--dry-run] [--changed <file>]\n                                               the Stryker config of a selection, as JSON. With --dry-run,\n                                               Stryker starts only the tests. With --changed, it mutates only\n                                               the changed files of the selection.\n  rigor-mutation scores <selection>... [--report <file>] [--summary <file>] [--last <file>]\n                       [--write-last <file>] [--test-files]\n                                               the score of each selection, with its gate and its count\n                                               of tests. With --last, a fall of the count of more than\n                                               maxTestFall % (default 20) against the file fails. With\n                                               --write-last, the counts of the passed selections go in\n                                               the file. With --test-files, a test file on the disk that\n                                               the report does not read fails.\n  rigor-mutation disables [--write]            compare the disable comments with their list\n  rigor-mutation load-check [<selection>...]   refuse each relative path of a package that leaves its folder.\n                                               Stryker starts the tests in a copy of the folder, so such a\n                                               path finds no file. No selection checks each package.\n\n  --lane <file>      the lane file. The default is mutation.json.\n  --changed <file>   a file with one changed path on each line, from the folder of the lane file,\n                     for example the output of git diff --name-only.\n\nA selection is a package (\"collections\") or a part of a package (\"collections.impl\").\nEach file of a package with parts must be in exactly one part. list --runs, and config and scores\nof a part, fail when it is not.\nThe score of a selection reads <dir>/${REPORT_DIR}/mutation.json, or the file of --report.\n`;\n\nconst SOURCE = /\\.(?:[cm]?[jt]s|tsx)$/;\nconst TEST = /\\.(?:test|spec)\\.[^.]+$/;\nconst SKIP = new Set([\"node_modules\", \"build\", \"dist\", \"reports\", \"coverage\"]);\n\n/**\n * This function gives each source file of a folder, from `root`, with `/`. It skips the outputs and the dot folders,\n * and the tests when `tests` is false.\n */\nfunction sourcesOf(root: string, dir: string, tests = false): string[] {\n  return readdirSync(dir, { withFileTypes: true })\n    .toSorted((x, y) => x.name.localeCompare(y.name))\n    .flatMap((e) => {\n      const path = resolve(dir, e.name);\n      if (e.isDirectory()) return e.name.startsWith(\".\") || SKIP.has(e.name) ? [] : sourcesOf(root, path, tests);\n      return e.isFile() && SOURCE.test(e.name) && (tests || !TEST.test(e.name)) ? [relative(root, path).replaceAll(\"\\\\\", \"/\")] : [];\n    });\n}\n\n/** This function checks the relative paths of the package of each selection (`load-check`). */\nfunction loadCheck(lane: Lane, laneDir: string, names: readonly string[], io: CliIo): number {\n  const pkgs = [...new Set((names.length === 0 ? Object.keys(lane.packages) : names.map((n) => select(lane, n).pkg)))];\n  let failed = 0;\n  for (const pkg of pkgs) {\n    const s = select(lane, pkg);\n    const dir = resolve(laneDir, s.dir);\n    if (!existsSync(dir)) throw new Error(`${pkg}: the folder ${s.dir} does not exist`);\n    const files = sourcesOf(dir, dir, true)\n      .filter((f) => !f.endsWith(\".d.ts\"))\n      .map((file) => ({ file, text: readFileSync(resolve(dir, file), \"utf8\") }));\n    const found = leavingPaths(files, s.vitestConfig);\n    for (const p of found) {\n      io.stderr(`${s.dir}/${p.file}:${String(p.line)}: \"${p.path}\" leaves the folder ${s.dir}. In the copy of Stryker it finds no file.\n`);\n    }\n    if (found.length === 0) io.stdout(`load-check ${pkg}: ${String(files.length)} files, no relative path leaves ${s.dir}\n`);\n    else failed += 1;\n  }\n  if (failed > 0) io.stderr(`load-check: ${String(failed)} packages have a relative path that leaves their folder. Import the file from its package, or move it into the folder.\n`);\n  return failed > 0 ? 1 : 0;\n}\n\nconst readJson = (file: string): unknown => JSON.parse(readFileSync(file, \"utf8\"));\n\n/**\n * This function examines the parts of the packages against their source files.\n *\n * @throws Error with each file that is in no part, in more than one part, or in a part and not in `mutate`\n */\nfunction checkParts(lane: Lane, laneDir: string, pkgs: readonly string[]): void {\n  const errors = pkgs.flatMap((pkg) => {\n    const p = lane.packages[pkg];\n    if (p?.parts === undefined) return [];\n    const dir = resolve(laneDir, p.dir);\n    if (!existsSync(dir)) return [`${pkg}: the folder ${p.dir} does not exist`];\n    return partErrors(lane, pkg, sourcesOf(dir, dir));\n  });\n  if (errors.length > 0) throw new Error(`the parts do not cover each file exactly one time:\\n  ${errors.join(\"\\n  \")}`);\n}\n\n/** This function examines the parts of the package of each selection that is a part. */\nconst checkPartsOf = (lane: Lane, laneDir: string, names: readonly string[]): void =>\n  checkParts(lane, laneDir, [...new Set(names.map((n) => select(lane, n)).filter((s) => s.name !== s.pkg).map((s) => s.pkg))]);\n\nfunction disables(lane: Lane, laneDir: string, write: boolean, io: CliIo): number {\n  const files = new Set<string>();\n  for (const [name, p] of Object.entries(lane.packages)) {\n    const dir = resolve(laneDir, p.dir);\n    if (!existsSync(dir)) throw new Error(`${name}: the folder ${p.dir} does not exist`);\n    for (const f of sourcesOf(laneDir, dir)) files.add(f);\n  }\n  const found = findDisables([...files].map((file) => ({ file, text: readFileSync(resolve(laneDir, file), \"utf8\") })));\n  const listFile = resolve(laneDir, lane.disables ?? \"mutation-disables.json\");\n  const listed = existsSync(listFile) ? (readJson(listFile) as Disable[]) : [];\n  const check = compareDisables(found, listed);\n  for (const d of check.noReason) io.stderr(`a disable without a reason after a colon: ${d.file}: ${d.comment}\\n`);\n  if (write) {\n    if (check.noReason.length > 0) return 1;\n    writeFileSync(listFile, `${JSON.stringify(found, null, 2)}\\n`);\n    io.stdout(`disables: wrote ${String(found.length)} comments to ${relative(io.cwd, listFile).replaceAll(\"\\\\\", \"/\")}\\n`);\n    return 0;\n  }\n  const perFile = new Map<string, number>();\n  for (const d of found) perFile.set(d.file, (perFile.get(d.file) ?? 0) + 1);\n  io.stdout(`disables: ${String(found.length)} in ${String(perFile.size)} files\\n`);\n  for (const [file, n] of perFile) io.stdout(`  ${file}: ${String(n)}\\n`);\n  for (const k of check.added) io.stderr(`not in the list: ${k}\\n`);\n  for (const k of check.removed) io.stderr(`in the list, not in the sources: ${k}\\n`);\n  if (check.added.length > 0 || check.removed.length > 0) {\n    io.stderr(\"disables: the sources and the list are not the same. Add each new disable with its reason, or start with --write and examine the diff.\\n\");\n  }\n  return check.ok ? 0 : 1;\n}\n\n/** The options of `scores`. */\ninterface ScoresOptions {\n  readonly report: string | undefined;\n  readonly summary: string | undefined;\n  readonly last: string | undefined;\n  readonly writeLast: string | undefined;\n  readonly testFiles: boolean;\n}\n\n/**\n * This function gives the score of each selection (`scores`). With `last`, it compares the test count with the last\n * good count (LANE.TESTS of Vex). With `testFiles`, it compares the test files on the disk with the report (LANE.FILES).\n */\nfunction scores(lane: Lane, laneDir: string, names: readonly string[], o: ScoresOptions, io: CliIo): number {\n  if (names.length === 0) throw new Error(`\"scores\" takes one or more selections`);\n  if (o.report !== undefined && names.length > 1) throw new Error(`--report takes one selection`);\n  checkPartsOf(lane, laneDir, names);\n  const lastFile = o.last === undefined ? undefined : resolve(io.cwd, o.last);\n  const last = lastFile === undefined || !existsSync(lastFile) ? {} : readCounts(lastFile);\n  if (lastFile !== undefined && !existsSync(lastFile)) io.stdout(`scores: the file ${o.last ?? \"\"} does not exist, so no count is compared\n`);\n  const notes = new Map<string, string[]>(names.map((n) => [n, []]));\n  const note = (name: string, line: string): void => void notes.get(name)?.push(line);\n  const results: Score[] = names.map((name) => {\n    const s = select(lane, name);\n    const file = o.report === undefined ? resolve(laneDir, s.dir, REPORT_DIR, \"mutation.json\") : resolve(io.cwd, o.report);\n    if (!existsSync(file)) {\n      const reason = `the report ${relative(io.cwd, file)} does not exist`;\n      return { name, gate: s.gate, detected: 0, hitLimit: 0, clockTimeouts: 0, valid: 0, survived: [], percent: 0, percentWithClock: 0, tests: undefined, pass: false, reason };\n    }\n    const report = parseReport(readJson(file));\n    let score = scoreReport(report, s);\n    const before = last[name];\n    if (lastFile !== undefined && before !== undefined) {\n      if (score.tests === undefined) score = failScore(score, `the report has no \"testFiles\", so the count of the tests is not known`);\n      else {\n        const fall = testFall(score.tests, before, lane.maxTestFall ?? MAX_TEST_FALL);\n        const planned = lane.plannedFalls?.[name];\n        if (fall !== undefined && planned === undefined) score = failScore(score, fall);\n        else if (fall !== undefined) note(name, `  a planned fall: ${fall.replace(/, so the score is no read$/, \"\")}. The reason: ${planned ?? \"\"}`);\n      }\n    }\n    if (o.testFiles) score = checkTestFiles(lane, laneDir, s.pkg, report, score, (line) => note(name, line));\n    return score;\n  });\n  for (const s of results) {\n    io.stdout(`${formatScore(s)}\n`);\n    for (const line of notes.get(s.name) ?? []) io.stdout(`${line}\n`);\n    if (!s.pass) for (const m of s.survived) io.stdout(`  survived: ${m}\n`);\n  }\n  if (o.summary !== undefined) appendFileSync(resolve(io.cwd, o.summary), `### Mutation scores\n\n${summaryMarkdown(results)}\n`);\n  if (o.writeLast !== undefined) {\n    const out = resolve(io.cwd, o.writeLast);\n    const counts = { ...(existsSync(out) ? readCounts(out) : {}) };\n    for (const s of results) if (s.pass && s.tests !== undefined) counts[s.name] = s.tests;\n    mkdirSync(dirname(out), { recursive: true });\n    writeFileSync(out, `${JSON.stringify(Object.fromEntries(Object.entries(counts).toSorted(([a], [b]) => (a < b ? -1 : 1))), null, 2)}\n`);\n  }\n  const failed = results.filter((s) => !s.pass).map((s) => s.name);\n  if (failed.length > 0) io.stderr(`The gate failed for ${failed.join(\", \")}.\n`);\n  return failed.length > 0 ? 1 : 0;\n}\n\n/** This function reads a file of test counts: an object from each selection to its count. */\nfunction readCounts(file: string): Record<string, number> {\n  const json = readJson(file);\n  const ok = typeof json === \"object\" && json !== null && !Array.isArray(json) && Object.values(json).every((n) => Number.isInteger(n) && (n as number) >= 0);\n  if (!ok) throw new Error(`the file ${file} is not an object of test counts`);\n  return json as Record<string, number>;\n}\n\n/** This function fails a score when a test file of its package is on the disk and the report does not read it. */\nfunction checkTestFiles(lane: Lane, laneDir: string, pkg: string, report: MutationReport, score: Score, note: (line: string) => void): Score {\n  const p = lane.packages[pkg];\n  if (p === undefined) return score;\n  const dir = resolve(laneDir, p.dir);\n  if (report.testFiles === undefined) return failScore(score, `the report has no \"testFiles\", so the test files that it read are not known`);\n  const onDisk = sourcesOf(dir, dir, true).filter((f) => TEST.test(f) && !f.endsWith(\".d.ts\"));\n  const unread = unreadTestFiles(report, onDisk, p.notRead, dir);\n  for (const f of unread) note(`  not read: ${p.dir}/${f}`);\n  if (unread.length === 0) return score;\n  return failScore(score, `the report does not read ${String(unread.length)} test files on the disk. Each one is no read, unless \"notRead\" of the package gives its reason`);\n}\n\n/** This function starts the CLI with its arguments and gives the exit code. */\nexport function runCli(argv: readonly string[], io: CliIo): number {\n  const { values, positionals } = parseArgs({\n    args: [...argv],\n    allowPositionals: true,\n    options: {\n      lane: { type: \"string\", default: \"mutation.json\" },\n      out: { type: \"string\" },\n      concurrency: { type: \"string\" },\n      report: { type: \"string\" },\n      summary: { type: \"string\" },\n      write: { type: \"boolean\", default: false },\n      runs: { type: \"boolean\", default: false },\n      \"dry-run\": { type: \"boolean\", default: false },\n      changed: { type: \"string\" },\n      last: { type: \"string\" },\n      \"write-last\": { type: \"string\" },\n      \"test-files\": { type: \"boolean\", default: false },\n      help: { type: \"boolean\", default: false },\n    },\n  });\n  const [command, ...names] = positionals;\n  if (values.help || command === undefined) {\n    io.stdout(HELP);\n    return command === undefined && !values.help ? 1 : 0;\n  }\n  const laneFile = resolve(io.cwd, values.lane);\n  const laneDir = dirname(laneFile);\n  const lane = parseLane(readJson(laneFile));\n  const changed =\n    values.changed === undefined\n      ? undefined\n      : readFileSync(resolve(io.cwd, values.changed), \"utf8\")\n          .split(\"\\n\")\n          .map((line) => line.trim())\n          .filter((line) => line !== \"\");\n  const one = (): string => {\n    if (names.length !== 1 || names[0] === undefined) throw new Error(`\"${command}\" takes one selection`);\n    return names[0];\n  };\n  switch (command) {\n    case \"list\": {\n      if (values.runs) checkParts(lane, laneDir, Object.keys(lane.packages));\n      if (changed !== undefined && !values.runs) throw new Error(`--changed of \"list\" takes --runs`);\n      const runs = values.runs ? runSelections(lane) : selectionNames(lane);\n      const shown = changed === undefined ? runs : runs.filter((n) => changedFiles(select(lane, n), changed).length > 0);\n      io.stdout(shown.length === 0 ? \"\" : `${shown.join(\"\\n\")}\\n`);\n      return 0;\n    }\n    case \"dir\":\n      io.stdout(`${relative(io.cwd, resolve(laneDir, select(lane, one()).dir)).replaceAll(\"\\\\\", \"/\") || \".\"}\\n`);\n      return 0;\n    case \"config\": {\n      const concurrency = values.concurrency === undefined ? undefined : Number(values.concurrency);\n      if (concurrency !== undefined && !(Number.isInteger(concurrency) && concurrency > 0)) throw new Error(`--concurrency is not a positive integer`);\n      checkPartsOf(lane, laneDir, [one()]);\n      const all = select(lane, one());\n      const files = changed === undefined ? undefined : changedFiles(all, changed);\n      if (files?.length === 0) throw new Error(`the selection ${all.name} has no changed file`);\n      const selection = files === undefined ? all : { ...all, mutate: files };\n      const options = { ...(concurrency === undefined ? {} : { concurrency }), dryRun: values[\"dry-run\"] };\n      const text = `${JSON.stringify(strykerConfig(selection, options), null, 2)}\\n`;\n      if (values.out === undefined) io.stdout(text);\n      else {\n        mkdirSync(dirname(resolve(io.cwd, values.out)), { recursive: true });\n        writeFileSync(resolve(io.cwd, values.out), text);\n      }\n      return 0;\n    }\n    case \"scores\":\n      return scores(lane, laneDir, names, { report: values.report, summary: values.summary, last: values.last, writeLast: values[\"write-last\"], testFiles: values[\"test-files\"] }, io);\n    case \"disables\":\n      return disables(lane, laneDir, values.write, io);\n    case \"load-check\":\n      return loadCheck(lane, laneDir, names, io);\n    default:\n      io.stderr(`unknown command \"${command}\"\\n\\n${HELP}`);\n      return 1;\n  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package/package.json

@@ -1,7 +1,7 @@
 {
   "$schema": "https://json.schemastore.org/package",
   "name": "@mark1russell7/rigor-mutation",
-  "version": "0.1.2",
+  "version": "0.1.3",
   "description": "Mutation tests with Stryker and Vitest for each package of a repository: the Stryker config of each package or part, a score with a gate for each package, and a check of the disabled mutants.",
   "keywords": [
     "mutation",

package/build/run-DDLcArjy.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"run-DDLcArjy.js","names":["TEST"],"sources":["../src/lane.ts","../src/config.ts","../src/score.ts","../src/disables.ts","../src/load.ts","../src/run.ts"],"sourcesContent":["import { matchesGlob, posix } from \"node:path\";\n\n/**\n * The lane file of a repository (`mutation.json`) names the packages that the mutation tests mutate. A package has\n * its folder, its globs and an optional gate. A big package has parts, so that each part has its own runner.\n */\n\n/** The mutation tests of one package. */\nexport interface PackageLane {\n  /** This field gives the folder of the package, from the folder of the lane file. Stryker starts in this folder. */\n  readonly dir: string;\n  /** These globs give the files to mutate, from `dir`. A glob with `!` removes the files of the globs before it. */\n  readonly mutate: readonly string[];\n  /**\n   * Each part has its own globs. The `!` globs of `mutate` also apply to each part. Each file of `mutate` must be in\n   * exactly one part, so that a full run mutates each file one time. `partErrors` examines this.\n   */\n  readonly parts?: Readonly<Record<string, readonly string[]>>;\n  /** This field gives the lowest mutation score in percent that passes. Without a gate, the lane only reports the score. */\n  readonly gate?: number;\n  /** This field gives the Vitest config file, from `dir`. Without it, Vitest finds its config in `dir`. */\n  readonly vitestConfig?: string;\n  /**\n   * This field gives the time in milliseconds that the clock adds to the time of the tests for each mutant. The\n   * default is 120000. A short time on a loaded runner stops mutants that the tests detect later.\n   */\n  readonly timeoutMS?: number;\n  /** This field gives the time in minutes for the run of the tests without mutants. The default is 15. */\n  readonly dryRunTimeoutMinutes?: number;\n  /**\n   * These options go into the Stryker config of each selection of the package, for example `ignoreStatic`. The lane\n   * owns the keys of `STRYKER_OWNED`, so the field cannot have them.\n   */\n  readonly stryker?: Readonly<Record<string, unknown>>;\n}\n\n/** The keys of the Stryker config that the lane owns. The field `stryker` of a package cannot have them. */\nexport const STRYKER_OWNED: readonly string[] = [\"mutate\", \"thresholds\", \"jsonReporter\", \"htmlReporter\", \"timeoutMS\", \"dryRunTimeoutMinutes\"];\n\n/** The lane file: the packages of the mutation tests, and the list of the disabled mutants. */\nexport interface Lane {\n  readonly packages: Readonly<Record<string, PackageLane>>;\n  /** This field gives the list of the disabled mutants, from the folder of the lane file. The default is `mutation-disables.json`. */\n  readonly disables?: string;\n}\n\n/** A selection is one Stryker run: a package (`collections`) or a part of a package (`collections.impl`). */\nexport interface Selection {\n  readonly name: string;\n  readonly pkg: string;\n  readonly dir: string;\n  readonly mutate: readonly string[];\n  readonly gate: number | undefined;\n  readonly vitestConfig: string | undefined;\n  readonly timeoutMS: number | undefined;\n  readonly dryRunTimeoutMinutes: number | undefined;\n  readonly stryker: Readonly<Record<string, unknown>> | undefined;\n}\n\nconst NAME = /^[\\w-]+$/;\n\nconst isRecord = (x: unknown): x is Record<string, unknown> => typeof x === \"object\" && x !== null && !Array.isArray(x);\n\nconst isGlobs = (x: unknown): x is string[] => Array.isArray(x) && x.length > 0 && x.every((g) => typeof g === \"string\" && g !== \"\");\n\n/** This function examines a package of the lane file. It gives the errors, with the name of the package. */\nfunction packageErrors(name: string, p: unknown): string[] {\n  if (!NAME.test(name)) return [`the package name \"${name}\" has a character that is not a letter, a digit, \"_\" or \"-\"`];\n  if (!isRecord(p)) return [`${name}: the package is not an object`];\n  const errors: string[] = [];\n  if (typeof p[\"dir\"] !== \"string\" || p[\"dir\"] === \"\") errors.push(`${name}: \"dir\" is not a folder name`);\n  if (!isGlobs(p[\"mutate\"])) errors.push(`${name}: \"mutate\" is not a list of globs`);\n  else if (p[\"mutate\"].every((g) => g.startsWith(\"!\"))) errors.push(`${name}: \"mutate\" has only \"!\" globs`);\n  const gate = p[\"gate\"];\n  if (gate !== undefined && (typeof gate !== \"number\" || !(gate >= 0 && gate <= 100))) errors.push(`${name}: \"gate\" is not a percent from 0 to 100`);\n  if (p[\"vitestConfig\"] !== undefined && typeof p[\"vitestConfig\"] !== \"string\") errors.push(`${name}: \"vitestConfig\" is not a file name`);\n  for (const field of [\"timeoutMS\", \"dryRunTimeoutMinutes\"]) {\n    const v = p[field];\n    if (v !== undefined && !(typeof v === \"number\" && Number.isInteger(v) && v > 0)) errors.push(`${name}: \"${field}\" is not a positive integer`);\n  }\n  const stryker = p[\"stryker\"];\n  if (stryker !== undefined) {\n    if (!isRecord(stryker)) errors.push(`${name}: \"stryker\" is not an object`);\n    else {\n      const owned = Object.keys(stryker).filter((k) => STRYKER_OWNED.includes(k));\n      if (owned.length > 0) errors.push(`${name}: \"stryker\" has ${owned.map((k) => `\"${k}\"`).join(\", \")}, but the lane owns these keys`);\n    }\n  }\n  const parts = p[\"parts\"];\n  if (parts !== undefined) {\n    if (!isRecord(parts) || Object.keys(parts).length === 0) errors.push(`${name}: \"parts\" is not an object with parts`);\n    else {\n      for (const [part, globs] of Object.entries(parts)) {\n        if (!NAME.test(part)) errors.push(`${name}: the part name \"${part}\" has a character that is not a letter, a digit, \"_\" or \"-\"`);\n        if (!isGlobs(globs) || globs.some((g) => g.startsWith(\"!\"))) errors.push(`${name}.${part}: the part is not a list of globs without \"!\"`);\n      }\n    }\n  }\n  return errors;\n}\n\n/**\n * This function examines the JSON of a lane file and gives the lane.\n *\n * @throws Error with each problem of the file\n */\nexport function parseLane(json: unknown): Lane {\n  if (!isRecord(json) || !isRecord(json[\"packages\"])) throw new Error(`the lane has no object \"packages\"`);\n  const errors = Object.entries(json[\"packages\"]).flatMap(([name, p]) => packageErrors(name, p));\n  if (Object.keys(json[\"packages\"]).length === 0) errors.push(`the lane has no packages`);\n  if (json[\"disables\"] !== undefined && typeof json[\"disables\"] !== \"string\") errors.push(`\"disables\" is not a file name`);\n  if (errors.length > 0) throw new Error(`the lane is not valid:\\n  ${errors.join(\"\\n  \")}`);\n  return json as unknown as Lane;\n}\n\n/** This function gives the names of all the selections of a lane: each package, then each part of the package. */\nexport function selectionNames(lane: Lane): string[] {\n  return Object.entries(lane.packages).flatMap(([name, p]) => [name, ...Object.keys(p.parts ?? {}).map((part) => `${name}.${part}`)]);\n}\n\n/** This function gives the selections of a full run: the parts of each package with parts, else the package. Each file is in one run. */\nexport function runSelections(lane: Lane): string[] {\n  return Object.entries(lane.packages).flatMap(([name, p]) => (p.parts === undefined ? [name] : Object.keys(p.parts).map((part) => `${name}.${part}`)));\n}\n\n/**\n * This function gives the selection of a name: a package, or a part of a package.\n *\n * @throws Error when the lane has no package or part of that name\n */\nexport function select(lane: Lane, name: string): Selection {\n  const [pkg = \"\", part, ...rest] = name.split(\".\");\n  const p = lane.packages[pkg];\n  const globs = part === undefined ? undefined : p?.parts?.[part];\n  if (p === undefined || rest.length > 0 || (part !== undefined && globs === undefined)) {\n    throw new Error(`the lane has no package or part \"${name}\". It has: ${selectionNames(lane).join(\", \")}`);\n  }\n  // Stryker applies a \"!\" glob to the globs before it, so the \"!\" globs of the package go after the globs of the part.\n  const mutate = globs === undefined ? p.mutate : [...globs, ...p.mutate.filter((g) => g.startsWith(\"!\"))];\n  return { name, pkg, dir: p.dir, mutate, gate: p.gate, vitestConfig: p.vitestConfig, timeoutMS: p.timeoutMS, dryRunTimeoutMinutes: p.dryRunTimeoutMinutes, stryker: p.stryker };\n}\n\n/**\n * This function tells if globs select a file. It reads the globs as Stryker does. A glob adds its files. A glob with\n * `!` removes its files from the files of the globs before it.\n */\nexport function globsSelect(globs: readonly string[], file: string): boolean {\n  let selected = false;\n  for (const g of globs) {\n    if (g.startsWith(\"!\")) {\n      if (selected && matchesGlob(file, g.slice(1))) selected = false;\n    } else if (!selected && matchesGlob(file, g)) selected = true;\n  }\n  return selected;\n}\n\n/**\n * This function gives the changed files of a selection, from the folder of its package. The globs of the selection\n * select the files.\n *\n * @param changed - the changed paths, from the folder of the lane file, with `/`\n */\nexport function changedFiles(selection: Selection, changed: readonly string[]): string[] {\n  const dir = posix.normalize(selection.dir.replaceAll(\"\\\\\", \"/\"));\n  return changed\n    .map((f) => posix.relative(dir, posix.normalize(f.replaceAll(\"\\\\\", \"/\"))))\n    .filter((f) => f !== \"\" && !f.startsWith(\"../\") && !posix.isAbsolute(f) && globsSelect(selection.mutate, f));\n}\n\n/**\n * This function examines the parts of a package against its files. It gives an error for each file of `mutate` in no\n * part. It also gives an error for each file in two parts, and for each file of a part that is not in `mutate`. A\n * package with no parts has no errors.\n *\n * @param files - the source files of the package, from its folder, with `/`\n */\nexport function partErrors(lane: Lane, pkg: string, files: readonly string[]): string[] {\n  const p = lane.packages[pkg];\n  if (p?.parts === undefined) return [];\n  const parts = Object.keys(p.parts).map((part) => ({ part, mutate: select(lane, `${pkg}.${part}`).mutate }));\n  const errors: string[] = [];\n  for (const file of files) {\n    const inMutate = globsSelect(p.mutate, file);\n    const inParts = parts.filter((x) => globsSelect(x.mutate, file)).map((x) => x.part);\n    if (inMutate && inParts.length === 0) errors.push(`${pkg}: the file ${file} is in no part, so a full run does not mutate it`);\n    else if (inParts.length > 1) errors.push(`${pkg}: the file ${file} is in more than one part: ${inParts.join(\", \")}`);\n    else if (!inMutate && inParts.length === 1) errors.push(`${pkg}: the file ${file} is in the part ${inParts.join(\"\")}, but not in \"mutate\"`);\n  }\n  return errors;\n}\n","import type { Selection } from \"./lane.ts\";\n\n/** The options of `strykerConfig`. */\nexport interface ConfigOptions {\n  /** This option gives the number of test processes. The default is 2. */\n  readonly concurrency?: number;\n  /** This option gives the folder of the reports, from the folder of the package. The default is `reports/mutation`. */\n  readonly reportDir?: string;\n  /**\n   * When this option is true, Stryker starts only the tests without mutants, and it does not stop at the first failed\n   * test. Use it to see if the tests pass under Stryker before a long run.\n   */\n  readonly dryRun?: boolean;\n}\n\n/** The Stryker config of one selection, as JSON. Stryker starts in the folder of the package. The field `stryker` of the lane adds keys. */\nexport interface StrykerConfig {\n  readonly [key: string]: unknown;\n  readonly testRunner: \"vitest\";\n  readonly plugins: readonly string[];\n  readonly vitest?: { readonly configFile: string };\n  readonly mutate: readonly string[];\n  readonly coverageAnalysis: \"perTest\";\n  readonly reporters: readonly string[];\n  readonly htmlReporter: { readonly fileName: string };\n  readonly jsonReporter: { readonly fileName: string };\n  readonly thresholds: { readonly high: number; readonly low: number; readonly break: null };\n  readonly concurrency: number;\n  readonly timeoutMS: number;\n  readonly dryRunTimeoutMinutes: number;\n  readonly dryRunOnly?: true;\n  readonly disableBail?: true;\n}\n\n/** The default folder of the reports, from the folder of the package. */\nexport const REPORT_DIR = \"reports/mutation\";\n\n/**\n * The default time in milliseconds that the clock adds to the time of the tests for each mutant. The default of\n * Stryker is 5000. On a loaded CI runner that time stopped mutants that the tests detected later.\n */\nexport const TIMEOUT_MS = 120_000;\n\n/** The default time in minutes for the run of the tests without mutants. The default of Stryker is 5. */\nexport const DRY_RUN_TIMEOUT_MINUTES = 15;\n\n/**\n * This function gives the Stryker config of a selection. The break of Stryker is off, because the gate of each\n * package is in `scoreReport`. Stryker 10.1.0 or later is necessary with Vitest 5: version 10.0 started no test on each\n * mutant (stryker-js issue 6210).\n */\nexport function strykerConfig(selection: Selection, options: ConfigOptions = {}): StrykerConfig {\n  const reportDir = options.reportDir ?? REPORT_DIR;\n  const low = selection.gate ?? 60;\n  return {\n    testRunner: \"vitest\",\n    plugins: [\"@stryker-mutator/vitest-runner\"],\n    ...(selection.vitestConfig === undefined ? {} : { vitest: { configFile: selection.vitestConfig } }),\n    mutate: selection.mutate,\n    coverageAnalysis: \"perTest\",\n    reporters: [\"clear-text\", \"progress\", \"html\", \"json\"],\n    htmlReporter: { fileName: `${reportDir}/index.html` },\n    jsonReporter: { fileName: `${reportDir}/mutation.json` },\n    thresholds: { high: Math.max(low, 90), low, break: null },\n    concurrency: options.concurrency ?? 2,\n    timeoutMS: selection.timeoutMS ?? TIMEOUT_MS,\n    dryRunTimeoutMinutes: selection.dryRunTimeoutMinutes ?? DRY_RUN_TIMEOUT_MINUTES,\n    // The keys of the lane field \"stryker\" replace the keys above, but \"--concurrency\" replaces its \"concurrency\".\n    ...selection.stryker,\n    ...(options.concurrency === undefined ? {} : { concurrency: options.concurrency }),\n    ...(options.dryRun === true ? { dryRunOnly: true, disableBail: true } : {}),\n  };\n}\n","/**\n * The score of a Stryker report, with the gate of the package. The score counts the detected mutants, out of the\n * mutants that a test covers or that survive. Compile errors, runtime errors and ignored mutants do not count.\n *\n * Stryker gives the status `Timeout` for two events. The hit limit stops a mutant with an endless loop: its\n * `statusReason` starts with `Hit limit`, and the mutant is detected. The clock stops a mutant that took too long. The\n * load of the runner can cause this. Thus the mutant is not detected for certain, and it counts as not detected.\n */\n\n/** A mutant of the JSON report of Stryker (the schema of mutation-testing-elements). */\nexport interface Mutant {\n  readonly status: string;\n  readonly mutatorName: string;\n  /** Stryker gives the reason of some statuses here. A `Timeout` of the hit limit has a reason that starts with `Hit limit`. */\n  readonly statusReason?: string | undefined;\n  readonly location: { readonly start: { readonly line: number } };\n}\n\n/** The JSON report of Stryker: the mutants of each mutated file. */\nexport interface MutationReport {\n  readonly files: Readonly<Record<string, { readonly mutants: readonly Mutant[] }>>;\n}\n\n/** The score of one selection. */\nexport interface Score {\n  readonly name: string;\n  readonly gate: number | undefined;\n  /** The mutants with the status `Killed`, and the mutants that the hit limit stopped. */\n  readonly detected: number;\n  /** The mutants that the hit limit stopped. They are in `detected`. */\n  readonly hitLimit: number;\n  /** The mutants that the clock stopped. They count as not detected, and they are in `survived`. */\n  readonly clockTimeouts: number;\n  /** The mutants that count: detected, survived or with no coverage. */\n  readonly valid: number;\n  /** Each mutant that survived, had no coverage or was stopped by the clock, as `file:line Mutator`. */\n  readonly survived: readonly string[];\n  /** The score in percent. It is 0 when no mutant counts. */\n  readonly percent: number;\n  /** The score in percent with the clock time-outs counted as detected, as Stryker counts them. The gate does not read it. */\n  readonly percentWithClock: number;\n  readonly pass: boolean;\n  /** The reason of a failure. */\n  readonly reason: string | undefined;\n}\n\nconst UNDETECTED = new Set([\"Survived\", \"NoCoverage\"]);\n\n/** This function tells if the hit limit of Stryker stopped a mutant. Then the mutant has an endless loop, and it is detected. */\nexport const isHitLimit = (m: Mutant): boolean => m.status === \"Timeout\" && (m.statusReason ?? \"\").startsWith(\"Hit limit\");\n\n/**\n * This function examines the JSON of a Stryker report and gives the report.\n *\n * @throws Error when the JSON has no files with mutants\n */\nexport function parseReport(json: unknown): MutationReport {\n  const files = typeof json === \"object\" && json !== null ? (json as { files?: unknown }).files : undefined;\n  if (typeof files !== \"object\" || files === null) throw new Error(`the report has no object \"files\"`);\n  for (const [file, data] of Object.entries(files)) {\n    if (!Array.isArray((data as { mutants?: unknown } | null)?.mutants)) throw new Error(`the report has no list \"mutants\" for ${file}`);\n  }\n  return json as MutationReport;\n}\n\n/**\n * This function gives the score of a report and applies the gate. A report with no mutants that count fails, also\n * without a gate: Stryker found no files. A report with mutants that count and none detected also fails: the test\n * runner started no test on the mutants. Stryker 10.0 with Vitest 5 gave this result.\n */\nexport function scoreReport(report: MutationReport, selection: { readonly name: string; readonly gate: number | undefined }): Score {\n  let detected = 0;\n  let valid = 0;\n  let hitLimit = 0;\n  let clockTimeouts = 0;\n  const survived: string[] = [];\n  for (const [file, data] of Object.entries(report.files)) {\n    for (const m of data.mutants) {\n      const at = `${file}:${String(m.location.start.line)} ${m.mutatorName}`;\n      if (m.status === \"Killed\" || isHitLimit(m)) {\n        detected++;\n        valid++;\n        if (m.status === \"Timeout\") hitLimit++;\n      } else if (m.status === \"Timeout\") {\n        clockTimeouts++;\n        valid++;\n        survived.push(`${at} (the clock stopped it)`);\n      } else if (UNDETECTED.has(m.status)) {\n        valid++;\n        survived.push(at);\n      }\n    }\n  }\n  const percent = valid === 0 ? 0 : (100 * detected) / valid;\n  const percentWithClock = valid === 0 ? 0 : (100 * (detected + clockTimeouts)) / valid;\n  const { name, gate } = selection;\n  const reason =\n    valid === 0\n      ? \"the report has no mutants that count: Stryker found no files to mutate, or it did not start\"\n      : detected === 0\n        ? `the tests detected none of the ${String(valid)} mutants: the test runner started no test on the mutants`\n        : gate !== undefined && percent < gate\n          ? `the score ${percent.toFixed(2)} % is under the gate ${String(gate)} %`\n          : undefined;\n  return { name, gate, detected, hitLimit, clockTimeouts, valid, survived, percent, percentWithClock, pass: reason === undefined, reason };\n}\n\n/** This function gives the time-outs of a score as text: the count of each kind, and the score that counts the clock time-outs as detected. */\nconst timeouts = (s: Score): string =>\n  `time-outs: ${String(s.hitLimit)} hit limit, ${String(s.clockTimeouts)} clock (${s.percentWithClock.toFixed(2)} % with the clock time-outs as detected)`;\n\n/** This function gives one line for a score, with the name of the selection and its result. The time-outs are in it when the report has some. */\nexport function formatScore(s: Score): string {\n  const gate = s.gate === undefined ? \"no gate\" : `gate ${String(s.gate)} %`;\n  const result = s.pass ? \"pass\" : `FAIL: ${s.reason ?? \"\"}`;\n  const time = s.hitLimit + s.clockTimeouts === 0 ? \"\" : `, ${timeouts(s)}`;\n  return `${s.name}: ${s.percent.toFixed(2)} % (${String(s.detected)} of ${String(s.valid)}, ${String(s.survived.length)} survived${time}), ${gate}: ${result}`;\n}\n\n/** This function gives a Markdown table of scores, for the summary of a CI job. */\nexport function summaryMarkdown(scores: readonly Score[]): string {\n  const rows = scores.map(\n    (s) =>\n      `| ${s.name} | ${s.percent.toFixed(2)} % | ${String(s.detected)} | ${String(s.valid)} | ${String(s.survived.length)} | ${String(s.clockTimeouts)} | ${s.percentWithClock.toFixed(2)} % | ${s.gate === undefined ? \"none\" : `${String(s.gate)} %`} | ${s.pass ? \"pass\" : `fail: ${s.reason ?? \"\"}`} |`,\n  );\n  return [\n    \"| Selection | Score | Detected | Valid | Survived | Clock time-outs | Score with them | Gate | Result |\",\n    \"| --- | ---: | ---: | ---: | ---: | ---: | ---: | ---: | --- |\",\n    ...rows,\n    \"\",\n  ].join(\"\\n\");\n}\n","/**\n * A comment `// Stryker disable next-line <Mutator>: <reason>` disables a mutant that is equivalent. The disable\n * raises the score, so each one is also in a list with its reason. These functions find the comments in the\n * sources and compare them with the list.\n */\n\n/** One disable comment of a source file. */\nexport interface Disable {\n  readonly file: string;\n  readonly comment: string;\n}\n\n/** The result of `compareDisables`. */\nexport interface DisableCheck {\n  /** The comments of the sources that are not in the list, as `file: comment`. */\n  readonly added: readonly string[];\n  /** The comments of the list that are not in the sources, as `file: comment`. */\n  readonly removed: readonly string[];\n  /** The comments with no reason after a colon. */\n  readonly noReason: readonly Disable[];\n  readonly ok: boolean;\n}\n\n/** This function finds each `Stryker disable` comment of the files. A file name uses `/`. */\nexport function findDisables(files: readonly { readonly file: string; readonly text: string }[]): Disable[] {\n  return files.flatMap(({ file, text }) =>\n    text\n      .split(\"\\n\")\n      .filter((line) => line.includes(\"Stryker disable\"))\n      .map((line) => ({ file, comment: line.trim() })),\n  );\n}\n\nconst counts = (xs: readonly Disable[]): Map<string, number> => {\n  const m = new Map<string, number>();\n  for (const x of xs) {\n    const k = `${x.file}: ${x.comment}`;\n    m.set(k, (m.get(k) ?? 0) + 1);\n  }\n  return m;\n};\n\n/**\n * This function tells if a comment has a reason: a mutator name, a colon, a space and a text. It reads the text by\n * index, so its time is linear in the length of the comment (a regular expression here was quadratic).\n */\nfunction hasReason(comment: string): boolean {\n  const start = comment.indexOf(\"Stryker disable \");\n  if (start < 0) return false;\n  const rest = comment.slice(start + \"Stryker disable \".length);\n  const colon = rest.indexOf(\":\");\n  return colon > 0 && rest[colon + 1] === \" \" && /\\S/.test(rest[colon + 2] ?? \"\");\n}\n\n/** This function compares the comments of the sources with the list. A file with the same comment two times needs it two times in the list. */\nexport function compareDisables(found: readonly Disable[], listed: readonly Disable[]): DisableCheck {\n  const noReason = found.filter((d) => !hasReason(d.comment));\n  const a = counts(found);\n  const b = counts(listed);\n  const added = [...a].filter(([k, n]) => n > (b.get(k) ?? 0)).map(([k]) => k);\n  const removed = [...b].filter(([k, n]) => n > (a.get(k) ?? 0)).map(([k]) => k);\n  return { added, removed, noReason, ok: added.length === 0 && removed.length === 0 && noReason.length === 0 };\n}\n","/**\n * The load check. Stryker copies the folder of a package to `<dir>/.stryker-tmp/sandbox-*` and starts the tests there.\n * A relative path that leaves the folder then finds no file. A test file that does not load gives no failed test, so\n * each mutant that it detects survives with no error (V-072 of Vex). This check finds these paths before Stryker. It\n * reads only the files that the run loads, so a script of the folder that no test loads can leave the folder.\n */\nimport { posix } from \"node:path\";\n\n/** A relative path in a file of a package that leaves the folder of the package. */\nexport interface LeavingPath {\n  /** The file, from the folder of the package, with `/`. */\n  readonly file: string;\n  /** The line of the path, from 1. */\n  readonly line: number;\n  /** The path as the file writes it. */\n  readonly path: string;\n}\n\n/** A file of a package and its text. */\nexport interface PackageFile {\n  /** The file, from the folder of the package, with `/`. */\n  readonly file: string;\n  readonly text: string;\n}\n\n// The paths that a module loads: import and export from, import(), require(), vi.mock() and the other vi functions,\n// and new URL(path, import.meta.url).\n// The optional \"(\" and its spaces are one group, so that each space has one match (no slow backtracking).\nconst LOADED = /(?:\\bfrom|\\bimport|\\brequire|\\bvi\\.\\w+|\\bnew\\s+URL)\\s*(?:\\(\\s*)?([\"'`])([^\"'`\\r\\n]*)\\1/g;\n// Each relative path string of a config file, for example setupFiles: [\"../testkit/setup.ts\"].\nconst CONFIG_PATH = /([\"'`])(\\.\\.?\\/[^\"'`\\r\\n]*)\\1/g;\n// A type import or export: the test runner removes it, so it loads no file.\nconst TYPE_ONLY = /^\\s*(?:import|export)\\s+type\\b/;\nconst COMMENT = /^\\s*(?:\\/\\/|\\/\\*|\\*)/;\nconst CONFIG_FILE = /(?:^|\\/)vite(?:st)?\\.(?:config|workspace)\\.[cm]?[jt]s$/;\n\n/**\n * This function tells if a file is a config file of Vitest or Vite. Each relative path string of a config file must\n * stay in the folder.\n *\n * @param vitestConfig - the field `vitestConfig` of the lane, from the folder of the package\n */\nexport function isConfigFile(file: string, vitestConfig?: string): boolean {\n  return CONFIG_FILE.test(file) || (vitestConfig !== undefined && posix.normalize(vitestConfig.replaceAll(\"\\\\\", \"/\")) === file);\n}\n\nfunction leaves(file: string, path: string): boolean {\n  if (!(path === \".\" || path === \"..\" || path.startsWith(\"./\") || path.startsWith(\"../\")) || path.includes(\"${\")) return false;\n  const target = posix.normalize(posix.join(posix.dirname(file), path));\n  return target === \"..\" || target.startsWith(\"../\");\n}\n\nconst TEST = /\\.(?:test|spec)\\.[cm]?[jt]sx?$/;\nconst EXTENSIONS = [\"\", \".ts\", \".tsx\", \".mts\", \".cts\", \".js\", \".mjs\", \".cjs\", \"/index.ts\", \"/index.js\"];\n\n/** This function gives each relative path of one file, with its line. It does not read comments and type imports. */\nfunction pathsOf(file: string, text: string, vitestConfig: string | undefined): { line: number; path: string }[] {\n  const pattern = isConfigFile(file, vitestConfig) ? CONFIG_PATH : LOADED;\n  return text.split(\"\\n\").flatMap((lineText, i) => {\n    if (COMMENT.test(lineText) || TYPE_ONLY.test(lineText)) return [];\n    return [...lineText.matchAll(pattern)].map((m) => ({ line: i + 1, path: m[2] ?? \"\" })).filter((p) => p.path.startsWith(\".\"));\n  });\n}\n\n/** This function gives the file of the package that a relative path in the folder loads, or undefined. */\nfunction target(file: string, path: string, known: ReadonlySet<string>): string | undefined {\n  const base = posix.normalize(posix.join(posix.dirname(file), path));\n  const stem = base.replace(/\\.(?:[cm]?js|jsx)$/, \"\");\n  return [...EXTENSIONS.map((e) => base + e), ...EXTENSIONS.slice(1).map((e) => stem + e)].find((f) => known.has(f));\n}\n\n/**\n * This function gives each relative path of the files that leaves the folder of the package. It reads the files that\n * the run loads. These are the test files, the config files, and each file that they load in the folder.\n * In a config file it reads each relative path string, for example a setup file. It does not read comments and type\n * imports.\n *\n * @param files - the files of the package, from its folder\n * @param vitestConfig - the field `vitestConfig` of the lane\n */\nexport function leavingPaths(files: readonly PackageFile[], vitestConfig?: string): LeavingPath[] {\n  const texts = new Map(files.map((f) => [f.file, f.text]));\n  const known = new Set(texts.keys());\n  const queue = files.map((f) => f.file).filter((f) => TEST.test(f) || isConfigFile(f, vitestConfig));\n  const loaded = new Set(queue);\n  const found: LeavingPath[] = [];\n  for (let next = queue.shift(); next !== undefined; next = queue.shift()) {\n    for (const { line, path } of pathsOf(next, texts.get(next) ?? \"\", vitestConfig)) {\n      if (leaves(next, path)) found.push({ file: next, line, path });\n      else {\n        const t = target(next, path, known);\n        if (t !== undefined && !loaded.has(t)) {\n          loaded.add(t);\n          queue.push(t);\n        }\n      }\n    }\n  }\n  return found.toSorted((a, b) => (a.file === b.file ? a.line - b.line : a.file < b.file ? -1 : 1));\n}\n","/**\n * The CLI `rigor-mutation`. The work is in `runCli`, so a test can start the CLI in a fixture folder.\n */\nimport { existsSync, mkdirSync, readdirSync, readFileSync, writeFileSync, appendFileSync } from \"node:fs\";\nimport { dirname, relative, resolve } from \"node:path\";\nimport { parseArgs } from \"node:util\";\nimport { REPORT_DIR, strykerConfig } from \"./config.ts\";\nimport { compareDisables, findDisables, type Disable } from \"./disables.ts\";\nimport { leavingPaths } from \"./load.ts\";\nimport { changedFiles, parseLane, partErrors, runSelections, select, selectionNames, type Lane } from \"./lane.ts\";\nimport { formatScore, parseReport, scoreReport, summaryMarkdown, type Score } from \"./score.ts\";\n\n/** The input and the output of the CLI. */\nexport interface CliIo {\n  readonly cwd: string;\n  readonly stdout: (text: string) => void;\n  readonly stderr: (text: string) => void;\n}\n\n/** The help text of the CLI. */\nexport const HELP: string = `rigor-mutation: the mutation tests of a repository, with Stryker and a gate for each package.\n\n  rigor-mutation list [--runs] [--changed <file>]\n                                               the packages and the parts of the lane. With --runs, the\n                                               selections of a full run: the parts of a package with parts.\n                                               With --changed, only the runs with a changed file.\n  rigor-mutation dir <selection>               the folder of the package of a selection\n  rigor-mutation config <selection> [--out <file>] [--concurrency <n>] [--dry-run] [--changed <file>]\n                                               the Stryker config of a selection, as JSON. With --dry-run,\n                                               Stryker starts only the tests. With --changed, it mutates only\n                                               the changed files of the selection.\n  rigor-mutation scores <selection>... [--report <file>] [--summary <file>]\n                                               the score of each selection, with its gate\n  rigor-mutation disables [--write]            compare the disable comments with their list\n  rigor-mutation load-check [<selection>...]   refuse each relative path of a package that leaves its folder.\n                                               Stryker starts the tests in a copy of the folder, so such a\n                                               path finds no file. No selection checks each package.\n\n  --lane <file>      the lane file. The default is mutation.json.\n  --changed <file>   a file with one changed path on each line, from the folder of the lane file,\n                     for example the output of git diff --name-only.\n\nA selection is a package (\"collections\") or a part of a package (\"collections.impl\").\nEach file of a package with parts must be in exactly one part. list --runs, and config and scores\nof a part, fail when it is not.\nThe score of a selection reads <dir>/${REPORT_DIR}/mutation.json, or the file of --report.\n`;\n\nconst SOURCE = /\\.(?:[cm]?[jt]s|tsx)$/;\nconst TEST = /\\.(?:test|spec)\\.[^.]+$/;\nconst SKIP = new Set([\"node_modules\", \"build\", \"dist\", \"reports\", \"coverage\"]);\n\n/**\n * This function gives each source file of a folder, from `root`, with `/`. It skips the outputs and the dot folders,\n * and the tests when `tests` is false.\n */\nfunction sourcesOf(root: string, dir: string, tests = false): string[] {\n  return readdirSync(dir, { withFileTypes: true })\n    .toSorted((x, y) => x.name.localeCompare(y.name))\n    .flatMap((e) => {\n      const path = resolve(dir, e.name);\n      if (e.isDirectory()) return e.name.startsWith(\".\") || SKIP.has(e.name) ? [] : sourcesOf(root, path, tests);\n      return e.isFile() && SOURCE.test(e.name) && (tests || !TEST.test(e.name)) ? [relative(root, path).replaceAll(\"\\\\\", \"/\")] : [];\n    });\n}\n\n/** This function checks the relative paths of the package of each selection (`load-check`). */\nfunction loadCheck(lane: Lane, laneDir: string, names: readonly string[], io: CliIo): number {\n  const pkgs = [...new Set((names.length === 0 ? Object.keys(lane.packages) : names.map((n) => select(lane, n).pkg)))];\n  let failed = 0;\n  for (const pkg of pkgs) {\n    const s = select(lane, pkg);\n    const dir = resolve(laneDir, s.dir);\n    if (!existsSync(dir)) throw new Error(`${pkg}: the folder ${s.dir} does not exist`);\n    const files = sourcesOf(dir, dir, true)\n      .filter((f) => !f.endsWith(\".d.ts\"))\n      .map((file) => ({ file, text: readFileSync(resolve(dir, file), \"utf8\") }));\n    const found = leavingPaths(files, s.vitestConfig);\n    for (const p of found) {\n      io.stderr(`${s.dir}/${p.file}:${String(p.line)}: \"${p.path}\" leaves the folder ${s.dir}. In the copy of Stryker it finds no file.\n`);\n    }\n    if (found.length === 0) io.stdout(`load-check ${pkg}: ${String(files.length)} files, no relative path leaves ${s.dir}\n`);\n    else failed += 1;\n  }\n  if (failed > 0) io.stderr(`load-check: ${String(failed)} packages have a relative path that leaves their folder. Import the file from its package, or move it into the folder.\n`);\n  return failed > 0 ? 1 : 0;\n}\n\nconst readJson = (file: string): unknown => JSON.parse(readFileSync(file, \"utf8\"));\n\n/**\n * This function examines the parts of the packages against their source files.\n *\n * @throws Error with each file that is in no part, in more than one part, or in a part and not in `mutate`\n */\nfunction checkParts(lane: Lane, laneDir: string, pkgs: readonly string[]): void {\n  const errors = pkgs.flatMap((pkg) => {\n    const p = lane.packages[pkg];\n    if (p?.parts === undefined) return [];\n    const dir = resolve(laneDir, p.dir);\n    if (!existsSync(dir)) return [`${pkg}: the folder ${p.dir} does not exist`];\n    return partErrors(lane, pkg, sourcesOf(dir, dir));\n  });\n  if (errors.length > 0) throw new Error(`the parts do not cover each file exactly one time:\\n  ${errors.join(\"\\n  \")}`);\n}\n\n/** This function examines the parts of the package of each selection that is a part. */\nconst checkPartsOf = (lane: Lane, laneDir: string, names: readonly string[]): void =>\n  checkParts(lane, laneDir, [...new Set(names.map((n) => select(lane, n)).filter((s) => s.name !== s.pkg).map((s) => s.pkg))]);\n\nfunction disables(lane: Lane, laneDir: string, write: boolean, io: CliIo): number {\n  const files = new Set<string>();\n  for (const [name, p] of Object.entries(lane.packages)) {\n    const dir = resolve(laneDir, p.dir);\n    if (!existsSync(dir)) throw new Error(`${name}: the folder ${p.dir} does not exist`);\n    for (const f of sourcesOf(laneDir, dir)) files.add(f);\n  }\n  const found = findDisables([...files].map((file) => ({ file, text: readFileSync(resolve(laneDir, file), \"utf8\") })));\n  const listFile = resolve(laneDir, lane.disables ?? \"mutation-disables.json\");\n  const listed = existsSync(listFile) ? (readJson(listFile) as Disable[]) : [];\n  const check = compareDisables(found, listed);\n  for (const d of check.noReason) io.stderr(`a disable without a reason after a colon: ${d.file}: ${d.comment}\\n`);\n  if (write) {\n    if (check.noReason.length > 0) return 1;\n    writeFileSync(listFile, `${JSON.stringify(found, null, 2)}\\n`);\n    io.stdout(`disables: wrote ${String(found.length)} comments to ${relative(io.cwd, listFile).replaceAll(\"\\\\\", \"/\")}\\n`);\n    return 0;\n  }\n  const perFile = new Map<string, number>();\n  for (const d of found) perFile.set(d.file, (perFile.get(d.file) ?? 0) + 1);\n  io.stdout(`disables: ${String(found.length)} in ${String(perFile.size)} files\\n`);\n  for (const [file, n] of perFile) io.stdout(`  ${file}: ${String(n)}\\n`);\n  for (const k of check.added) io.stderr(`not in the list: ${k}\\n`);\n  for (const k of check.removed) io.stderr(`in the list, not in the sources: ${k}\\n`);\n  if (check.added.length > 0 || check.removed.length > 0) {\n    io.stderr(\"disables: the sources and the list are not the same. Add each new disable with its reason, or start with --write and examine the diff.\\n\");\n  }\n  return check.ok ? 0 : 1;\n}\n\n/** This function starts the CLI with its arguments and gives the exit code. */\nexport function runCli(argv: readonly string[], io: CliIo): number {\n  const { values, positionals } = parseArgs({\n    args: [...argv],\n    allowPositionals: true,\n    options: {\n      lane: { type: \"string\", default: \"mutation.json\" },\n      out: { type: \"string\" },\n      concurrency: { type: \"string\" },\n      report: { type: \"string\" },\n      summary: { type: \"string\" },\n      write: { type: \"boolean\", default: false },\n      runs: { type: \"boolean\", default: false },\n      \"dry-run\": { type: \"boolean\", default: false },\n      changed: { type: \"string\" },\n      help: { type: \"boolean\", default: false },\n    },\n  });\n  const [command, ...names] = positionals;\n  if (values.help || command === undefined) {\n    io.stdout(HELP);\n    return command === undefined && !values.help ? 1 : 0;\n  }\n  const laneFile = resolve(io.cwd, values.lane);\n  const laneDir = dirname(laneFile);\n  const lane = parseLane(readJson(laneFile));\n  const changed =\n    values.changed === undefined\n      ? undefined\n      : readFileSync(resolve(io.cwd, values.changed), \"utf8\")\n          .split(\"\\n\")\n          .map((line) => line.trim())\n          .filter((line) => line !== \"\");\n  const one = (): string => {\n    if (names.length !== 1 || names[0] === undefined) throw new Error(`\"${command}\" takes one selection`);\n    return names[0];\n  };\n  switch (command) {\n    case \"list\": {\n      if (values.runs) checkParts(lane, laneDir, Object.keys(lane.packages));\n      if (changed !== undefined && !values.runs) throw new Error(`--changed of \"list\" takes --runs`);\n      const runs = values.runs ? runSelections(lane) : selectionNames(lane);\n      const shown = changed === undefined ? runs : runs.filter((n) => changedFiles(select(lane, n), changed).length > 0);\n      io.stdout(shown.length === 0 ? \"\" : `${shown.join(\"\\n\")}\\n`);\n      return 0;\n    }\n    case \"dir\":\n      io.stdout(`${relative(io.cwd, resolve(laneDir, select(lane, one()).dir)).replaceAll(\"\\\\\", \"/\") || \".\"}\\n`);\n      return 0;\n    case \"config\": {\n      const concurrency = values.concurrency === undefined ? undefined : Number(values.concurrency);\n      if (concurrency !== undefined && !(Number.isInteger(concurrency) && concurrency > 0)) throw new Error(`--concurrency is not a positive integer`);\n      checkPartsOf(lane, laneDir, [one()]);\n      const all = select(lane, one());\n      const files = changed === undefined ? undefined : changedFiles(all, changed);\n      if (files?.length === 0) throw new Error(`the selection ${all.name} has no changed file`);\n      const selection = files === undefined ? all : { ...all, mutate: files };\n      const options = { ...(concurrency === undefined ? {} : { concurrency }), dryRun: values[\"dry-run\"] };\n      const text = `${JSON.stringify(strykerConfig(selection, options), null, 2)}\\n`;\n      if (values.out === undefined) io.stdout(text);\n      else {\n        mkdirSync(dirname(resolve(io.cwd, values.out)), { recursive: true });\n        writeFileSync(resolve(io.cwd, values.out), text);\n      }\n      return 0;\n    }\n    case \"scores\": {\n      if (names.length === 0) throw new Error(`\"scores\" takes one or more selections`);\n      if (values.report !== undefined && names.length > 1) throw new Error(`--report takes one selection`);\n      checkPartsOf(lane, laneDir, names);\n      const scores: Score[] = names.map((name) => {\n        const s = select(lane, name);\n        const file = values.report === undefined ? resolve(laneDir, s.dir, REPORT_DIR, \"mutation.json\") : resolve(io.cwd, values.report);\n        if (!existsSync(file)) {\n          const reason = `the report ${relative(io.cwd, file)} does not exist`;\n          return { name, gate: s.gate, detected: 0, hitLimit: 0, clockTimeouts: 0, valid: 0, survived: [], percent: 0, percentWithClock: 0, pass: false, reason };\n        }\n        return scoreReport(parseReport(readJson(file)), s);\n      });\n      for (const s of scores) {\n        io.stdout(`${formatScore(s)}\\n`);\n        if (!s.pass) for (const m of s.survived) io.stdout(`  survived: ${m}\\n`);\n      }\n      if (values.summary !== undefined) appendFileSync(resolve(io.cwd, values.summary), `### Mutation scores\\n\\n${summaryMarkdown(scores)}\\n`);\n      const failed = scores.filter((s) => !s.pass).map((s) => s.name);\n      if (failed.length > 0) io.stderr(`The gate failed for ${failed.join(\", \")}.\\n`);\n      return failed.length > 0 ? 1 : 0;\n    }\n    case \"disables\":\n      return disables(lane, laneDir, values.write, io);\n    case \"load-check\":\n      return loadCheck(lane, laneDir, names, io);\n    default:\n      io.stderr(`unknown command \"${command}\"\\n\\n${HELP}`);\n      return 1;\n  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