@mariozechner/pi-coding-agent 0.58.4 → 0.60.0

package/dist/core/keybindings.js

@@ -63,9 +63,11 @@ function isAppAction(action) {
  */
 export class KeybindingsManager {
     config;
+    configPath;
     appActionToKeys;
-    constructor(config) {
+    constructor(config, configPath) {
         this.config = config;
+        this.configPath = configPath;
         this.appActionToKeys = new Map();
         this.buildMaps();
     }
@@ -75,16 +77,8 @@ export class KeybindingsManager {
     static create(agentDir = getAgentDir()) {
         const configPath = join(agentDir, "keybindings.json");
         const config = KeybindingsManager.loadFromFile(configPath);
-        const manager = new KeybindingsManager(config);
-        // Set up editor keybindings globally
-        // Include both editor actions and expandTools (shared between app and editor)
-        const editorConfig = {};
-        for (const [action, keys] of Object.entries(config)) {
-            if (!isAppAction(action) || action === "expandTools") {
-                editorConfig[action] = keys;
-            }
-        }
-        setEditorKeybindings(new EditorKeybindingsManager(editorConfig));
+        const manager = new KeybindingsManager(config, configPath);
+        manager.applyEditorKeybindings();
         return manager;
     }
     /**
@@ -93,6 +87,13 @@ export class KeybindingsManager {
     static inMemory(config = {}) {
         return new KeybindingsManager(config);
     }
+    reload() {
+        if (!this.configPath)
+            return;
+        this.config = KeybindingsManager.loadFromFile(this.configPath);
+        this.buildMaps();
+        this.applyEditorKeybindings();
+    }
     static loadFromFile(path) {
         if (!existsSync(path))
             return {};
@@ -118,6 +119,15 @@ export class KeybindingsManager {
             this.appActionToKeys.set(action, keyArray);
         }
     }
+    applyEditorKeybindings() {
+        const editorConfig = {};
+        for (const [action, keys] of Object.entries(this.config)) {
+            if (!isAppAction(action) || action === "expandTools") {
+                editorConfig[action] = keys;
+            }
+        }
+        setEditorKeybindings(new EditorKeybindingsManager(editorConfig));
+    }
     /**
      * Check if input matches an app action.
      */

package/dist/core/keybindings.js.map

@@ -1 +1 @@
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{\n\tDEFAULT_EDITOR_KEYBINDINGS,\n\ttype EditorAction,\n\ttype EditorKeybindingsConfig,\n\tEditorKeybindingsManager,\n\ttype KeyId,\n\tmatchesKey,\n\tsetEditorKeybindings,\n} from \"@mariozechner/pi-tui\";\nimport { existsSync, readFileSync } from \"fs\";\nimport { join } from \"path\";\nimport { getAgentDir } from \"../config.js\";\n\n/**\n * Application-level actions (coding agent specific).\n */\nexport type AppAction =\n\t| \"interrupt\"\n\t| \"clear\"\n\t| \"exit\"\n\t| \"suspend\"\n\t| \"cycleThinkingLevel\"\n\t| \"cycleModelForward\"\n\t| \"cycleModelBackward\"\n\t| \"selectModel\"\n\t| \"expandTools\"\n\t| \"toggleThinking\"\n\t| \"toggleSessionNamedFilter\"\n\t| \"externalEditor\"\n\t| \"followUp\"\n\t| \"dequeue\"\n\t| \"pasteImage\"\n\t| \"newSession\"\n\t| \"tree\"\n\t| \"fork\"\n\t| \"resume\";\n\n/**\n * All configurable actions.\n */\nexport type KeyAction = AppAction | EditorAction;\n\n/**\n * Full keybindings configuration (app + editor actions).\n */\nexport type KeybindingsConfig = {\n\t[K in KeyAction]?: KeyId | KeyId[];\n};\n\n/**\n * Default application keybindings.\n */\nexport const DEFAULT_APP_KEYBINDINGS: Record<AppAction, KeyId | KeyId[]> = {\n\tinterrupt: \"escape\",\n\tclear: \"ctrl+c\",\n\texit: \"ctrl+d\",\n\tsuspend: \"ctrl+z\",\n\tcycleThinkingLevel: \"shift+tab\",\n\tcycleModelForward: \"ctrl+p\",\n\tcycleModelBackward: \"shift+ctrl+p\",\n\tselectModel: \"ctrl+l\",\n\texpandTools: \"ctrl+o\",\n\ttoggleThinking: \"ctrl+t\",\n\ttoggleSessionNamedFilter: \"ctrl+n\",\n\texternalEditor: \"ctrl+g\",\n\tfollowUp: \"alt+enter\",\n\tdequeue: \"alt+up\",\n\tpasteImage: process.platform === \"win32\" ? \"alt+v\" : \"ctrl+v\",\n\tnewSession: [],\n\ttree: [],\n\tfork: [],\n\tresume: [],\n};\n\n/**\n * All default keybindings (app + editor).\n */\nexport const DEFAULT_KEYBINDINGS: Required<KeybindingsConfig> = {\n\t...DEFAULT_EDITOR_KEYBINDINGS,\n\t...DEFAULT_APP_KEYBINDINGS,\n};\n\n// App actions list for type checking\nconst APP_ACTIONS: AppAction[] = [\n\t\"interrupt\",\n\t\"clear\",\n\t\"exit\",\n\t\"suspend\",\n\t\"cycleThinkingLevel\",\n\t\"cycleModelForward\",\n\t\"cycleModelBackward\",\n\t\"selectModel\",\n\t\"expandTools\",\n\t\"toggleThinking\",\n\t\"toggleSessionNamedFilter\",\n\t\"externalEditor\",\n\t\"followUp\",\n\t\"dequeue\",\n\t\"pasteImage\",\n\t\"newSession\",\n\t\"tree\",\n\t\"fork\",\n\t\"resume\",\n];\n\nfunction isAppAction(action: string): action is AppAction {\n\treturn APP_ACTIONS.includes(action as AppAction);\n}\n\n/**\n * Manages all keybindings (app + editor).\n */\nexport class KeybindingsManager {\n\tprivate config: KeybindingsConfig;\n\tprivate appActionToKeys: Map<AppAction, KeyId[]>;\n\n\tprivate constructor(config: KeybindingsConfig) {\n\t\tthis.config = config;\n\t\tthis.appActionToKeys = new Map();\n\t\tthis.buildMaps();\n\t}\n\n\t/**\n\t * Create from config file and set up editor keybindings.\n\t */\n\tstatic create(agentDir: string = getAgentDir()): KeybindingsManager {\n\t\tconst configPath = join(agentDir, \"keybindings.json\");\n\t\tconst config = KeybindingsManager.loadFromFile(configPath);\n\t\tconst manager = new KeybindingsManager(config);\n\n\t\t// Set up editor keybindings globally\n\t\t// Include both editor actions and expandTools (shared between app and editor)\n\t\tconst editorConfig: EditorKeybindingsConfig = {};\n\t\tfor (const [action, keys] of Object.entries(config)) {\n\t\t\tif (!isAppAction(action) || action === \"expandTools\") {\n\t\t\t\teditorConfig[action as EditorAction] = keys;\n\t\t\t}\n\t\t}\n\t\tsetEditorKeybindings(new EditorKeybindingsManager(editorConfig));\n\n\t\treturn manager;\n\t}\n\n\t/**\n\t * Create in-memory.\n\t */\n\tstatic inMemory(config: KeybindingsConfig = {}): KeybindingsManager {\n\t\treturn new KeybindingsManager(config);\n\t}\n\n\tprivate static loadFromFile(path: string): KeybindingsConfig {\n\t\tif (!existsSync(path)) return {};\n\t\ttry {\n\t\t\treturn JSON.parse(readFileSync(path, \"utf-8\"));\n\t\t} catch {\n\t\t\treturn {};\n\t\t}\n\t}\n\n\tprivate buildMaps(): void {\n\t\tthis.appActionToKeys.clear();\n\n\t\t// Set defaults for app actions\n\t\tfor (const [action, keys] of Object.entries(DEFAULT_APP_KEYBINDINGS)) {\n\t\t\tconst keyArray = Array.isArray(keys) ? keys : [keys];\n\t\t\tthis.appActionToKeys.set(action as AppAction, [...keyArray]);\n\t\t}\n\n\t\t// Override with user config (app actions only)\n\t\tfor (const [action, keys] of Object.entries(this.config)) {\n\t\t\tif (keys === undefined || !isAppAction(action)) continue;\n\t\t\tconst keyArray = Array.isArray(keys) ? keys : [keys];\n\t\t\tthis.appActionToKeys.set(action, keyArray);\n\t\t}\n\t}\n\n\t/**\n\t * Check if input matches an app action.\n\t */\n\tmatches(data: string, action: AppAction): boolean {\n\t\tconst keys = this.appActionToKeys.get(action);\n\t\tif (!keys) return false;\n\t\tfor (const key of keys) {\n\t\t\tif (matchesKey(data, key)) return true;\n\t\t}\n\t\treturn false;\n\t}\n\n\t/**\n\t * Get keys bound to an app action.\n\t */\n\tgetKeys(action: AppAction): KeyId[] {\n\t\treturn this.appActionToKeys.get(action) ?? [];\n\t}\n\n\t/**\n\t * Get the full effective config.\n\t */\n\tgetEffectiveConfig(): Required<KeybindingsConfig> {\n\t\tconst result = { ...DEFAULT_KEYBINDINGS };\n\t\tfor (const [action, keys] of Object.entries(this.config)) {\n\t\t\tif (keys !== undefined) {\n\t\t\t\t(result as KeybindingsConfig)[action as KeyAction] = keys;\n\t\t\t}\n\t\t}\n\t\treturn result;\n\t}\n}\n\n// Re-export for convenience\nexport type { EditorAction, KeyId };\n"]}
+{"version":3,"file":"keybindings.js","sourceRoot":"","sources":["../../src/core/keybindings.ts"],"names":[],"mappings":"AAAA,OAAO,EACN,0BAA0B,EAG1B,wBAAwB,EAExB,UAAU,EACV,oBAAoB,GACpB,MAAM,sBAAsB,CAAC;AAC9B,OAAO,EAAE,UAAU,EAAE,YAAY,EAAE,MAAM,IAAI,CAAC;AAC9C,OAAO,EAAE,IAAI,EAAE,MAAM,MAAM,CAAC;AAC5B,OAAO,EAAE,WAAW,EAAE,MAAM,cAAc,CAAC;AAsC3C;;GAEG;AACH,MAAM,CAAC,MAAM,uBAAuB,GAAuC;IAC1E,SAAS,EAAE,QAAQ;IACnB,KAAK,EAAE,QAAQ;IACf,IAAI,EAAE,QAAQ;IACd,OAAO,EAAE,QAAQ;IACjB,kBAAkB,EAAE,WAAW;IAC/B,iBAAiB,EAAE,QAAQ;IAC3B,kBAAkB,EAAE,cAAc;IAClC,WAAW,EAAE,QAAQ;IACrB,WAAW,EAAE,QAAQ;IACrB,cAAc,EAAE,QAAQ;IACxB,wBAAwB,EAAE,QAAQ;IAClC,cAAc,EAAE,QAAQ;IACxB,QAAQ,EAAE,WAAW;IACrB,OAAO,EAAE,QAAQ;IACjB,UAAU,EAAE,OAAO,CAAC,QAAQ,KAAK,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,QAAQ;IAC7D,UAAU,EAAE,EAAE;IACd,IAAI,EAAE,EAAE;IACR,IAAI,EAAE,EAAE;IACR,MAAM,EAAE,EAAE;CACV,CAAC;AAEF;;GAEG;AACH,MAAM,CAAC,MAAM,mBAAmB,GAAgC;IAC/D,GAAG,0BAA0B;IAC7B,GAAG,uBAAuB;CAC1B,CAAC;AAEF,qCAAqC;AACrC,MAAM,WAAW,GAAgB;IAChC,WAAW;IACX,OAAO;IACP,MAAM;IACN,SAAS;IACT,oBAAoB;IACpB,mBAAmB;IACnB,oBAAoB;IACpB,aAAa;IACb,aAAa;IACb,gBAAgB;IAChB,0BAA0B;IAC1B,gBAAgB;IAChB,UAAU;IACV,SAAS;IACT,YAAY;IACZ,YAAY;IACZ,MAAM;IACN,MAAM;IACN,QAAQ;CACR,CAAC;AAEF,SAAS,WAAW,CAAC,MAAc,EAAuB;IACzD,OAAO,WAAW,CAAC,QAAQ,CAAC,MAAmB,CAAC,CAAC;AAAA,CACjD;AAED;;GAEG;AACH,MAAM,OAAO,kBAAkB;IACtB,MAAM,CAAoB;IAC1B,UAAU,CAAqB;IAC/B,eAAe,CAA0B;IAEjD,YAAoB,MAAyB,EAAE,UAAmB,EAAE;QACnE,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC;QACrB,IAAI,CAAC,UAAU,GAAG,UAAU,CAAC;QAC7B,IAAI,CAAC,eAAe,GAAG,IAAI,GAAG,EAAE,CAAC;QACjC,IAAI,CAAC,SAAS,EAAE,CAAC;IAAA,CACjB;IAED;;OAEG;IACH,MAAM,CAAC,MAAM,CAAC,QAAQ,GAAW,WAAW,EAAE,EAAsB;QACnE,MAAM,UAAU,GAAG,IAAI,CAAC,QAAQ,EAAE,kBAAkB,CAAC,CAAC;QACtD,MAAM,MAAM,GAAG,kBAAkB,CAAC,YAAY,CAAC,UAAU,CAAC,CAAC;QAC3D,MAAM,OAAO,GAAG,IAAI,kBAAkB,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;QAC3D,OAAO,CAAC,sBAAsB,EAAE,CAAC;QACjC,OAAO,OAAO,CAAC;IAAA,CACf;IAED;;OAEG;IACH,MAAM,CAAC,QAAQ,CAAC,MAAM,GAAsB,EAAE,EAAsB;QACnE,OAAO,IAAI,kBAAkB,CAAC,MAAM,CAAC,CAAC;IAAA,CACtC;IAED,MAAM,GAAS;QACd,IAAI,CAAC,IAAI,CAAC,UAAU;YAAE,OAAO;QAC7B,IAAI,CAAC,MAAM,GAAG,kBAAkB,CAAC,YAAY,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;QAC/D,IAAI,CAAC,SAAS,EAAE,CAAC;QACjB,IAAI,CAAC,sBAAsB,EAAE,CAAC;IAAA,CAC9B;IAEO,MAAM,CAAC,YAAY,CAAC,IAAY,EAAqB;QAC5D,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC;YAAE,OAAO,EAAE,CAAC;QACjC,IAAI,CAAC;YACJ,OAAO,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC;QAChD,CAAC;QAAC,MAAM,CAAC;YACR,OAAO,EAAE,CAAC;QACX,CAAC;IAAA,CACD;IAEO,SAAS,GAAS;QACzB,IAAI,CAAC,eAAe,CAAC,KAAK,EAAE,CAAC;QAE7B,+BAA+B;QAC/B,KAAK,MAAM,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,MAAM,CAAC,OAAO,CAAC,uBAAuB,CAAC,EAAE,CAAC;YACtE,MAAM,QAAQ,GAAG,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;YACrD,IAAI,CAAC,eAAe,CAAC,GAAG,CAAC,MAAmB,EAAE,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAC;QAC9D,CAAC;QAED,+CAA+C;QAC/C,KAAK,MAAM,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC;YAC1D,IAAI,IAAI,KAAK,SAAS,IAAI,CAAC,WAAW,CAAC,MAAM,CAAC;gBAAE,SAAS;YACzD,MAAM,QAAQ,GAAG,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;YACrD,IAAI,CAAC,eAAe,CAAC,GAAG,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC;QAC5C,CAAC;IAAA,CACD;IAEO,sBAAsB,GAAS;QACtC,MAAM,YAAY,GAA4B,EAAE,CAAC;QACjD,KAAK,MAAM,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC;YAC1D,IAAI,CAAC,WAAW,CAAC,MAAM,CAAC,IAAI,MAAM,KAAK,aAAa,EAAE,CAAC;gBACtD,YAAY,CAAC,MAAsB,CAAC,GAAG,IAAI,CAAC;YAC7C,CAAC;QACF,CAAC;QACD,oBAAoB,CAAC,IAAI,wBAAwB,CAAC,YAAY,CAAC,CAAC,CAAC;IAAA,CACjE;IAED;;OAEG;IACH,OAAO,CAAC,IAAY,EAAE,MAAiB,EAAW;QACjD,MAAM,IAAI,GAAG,IAAI,CAAC,eAAe,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;QAC9C,IAAI,CAAC,IAAI;YAAE,OAAO,KAAK,CAAC;QACxB,KAAK,MAAM,GAAG,IAAI,IAAI,EAAE,CAAC;YACxB,IAAI,UAAU,CAAC,IAAI,EAAE,GAAG,CAAC;gBAAE,OAAO,IAAI,CAAC;QACxC,CAAC;QACD,OAAO,KAAK,CAAC;IAAA,CACb;IAED;;OAEG;IACH,OAAO,CAAC,MAAiB,EAAW;QACnC,OAAO,IAAI,CAAC,eAAe,CAAC,GAAG,CAAC,MAAM,CAAC,IAAI,EAAE,CAAC;IAAA,CAC9C;IAED;;OAEG;IACH,kBAAkB,GAAgC;QACjD,MAAM,MAAM,GAAG,EAAE,GAAG,mBAAmB,EAAE,CAAC;QAC1C,KAAK,MAAM,CAAC,MAAM,EAAE,IAAI,CAAC,IAAI,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC;YAC1D,IAAI,IAAI,KAAK,SAAS,EAAE,CAAC;gBACvB,MAA4B,CAAC,MAAmB,CAAC,GAAG,IAAI,CAAC;YAC3D,CAAC;QACF,CAAC;QACD,OAAO,MAAM,CAAC;IAAA,CACd;CACD","sourcesContent":["import {\n\tDEFAULT_EDITOR_KEYBINDINGS,\n\ttype EditorAction,\n\ttype EditorKeybindingsConfig,\n\tEditorKeybindingsManager,\n\ttype KeyId,\n\tmatchesKey,\n\tsetEditorKeybindings,\n} from \"@mariozechner/pi-tui\";\nimport { existsSync, readFileSync } from \"fs\";\nimport { join } from \"path\";\nimport { getAgentDir } from \"../config.js\";\n\n/**\n * Application-level actions (coding agent specific).\n */\nexport type AppAction =\n\t| \"interrupt\"\n\t| \"clear\"\n\t| \"exit\"\n\t| \"suspend\"\n\t| \"cycleThinkingLevel\"\n\t| \"cycleModelForward\"\n\t| \"cycleModelBackward\"\n\t| \"selectModel\"\n\t| \"expandTools\"\n\t| \"toggleThinking\"\n\t| \"toggleSessionNamedFilter\"\n\t| \"externalEditor\"\n\t| \"followUp\"\n\t| \"dequeue\"\n\t| \"pasteImage\"\n\t| \"newSession\"\n\t| \"tree\"\n\t| \"fork\"\n\t| \"resume\";\n\n/**\n * All configurable actions.\n */\nexport type KeyAction = AppAction | EditorAction;\n\n/**\n * Full keybindings configuration (app + editor actions).\n */\nexport type KeybindingsConfig = {\n\t[K in KeyAction]?: KeyId | KeyId[];\n};\n\n/**\n * Default application keybindings.\n */\nexport const DEFAULT_APP_KEYBINDINGS: Record<AppAction, KeyId | KeyId[]> = {\n\tinterrupt: \"escape\",\n\tclear: \"ctrl+c\",\n\texit: \"ctrl+d\",\n\tsuspend: \"ctrl+z\",\n\tcycleThinkingLevel: \"shift+tab\",\n\tcycleModelForward: \"ctrl+p\",\n\tcycleModelBackward: \"shift+ctrl+p\",\n\tselectModel: \"ctrl+l\",\n\texpandTools: \"ctrl+o\",\n\ttoggleThinking: \"ctrl+t\",\n\ttoggleSessionNamedFilter: \"ctrl+n\",\n\texternalEditor: \"ctrl+g\",\n\tfollowUp: \"alt+enter\",\n\tdequeue: \"alt+up\",\n\tpasteImage: process.platform === \"win32\" ? \"alt+v\" : \"ctrl+v\",\n\tnewSession: [],\n\ttree: [],\n\tfork: [],\n\tresume: [],\n};\n\n/**\n * All default keybindings (app + editor).\n */\nexport const DEFAULT_KEYBINDINGS: Required<KeybindingsConfig> = {\n\t...DEFAULT_EDITOR_KEYBINDINGS,\n\t...DEFAULT_APP_KEYBINDINGS,\n};\n\n// App actions list for type checking\nconst APP_ACTIONS: AppAction[] = [\n\t\"interrupt\",\n\t\"clear\",\n\t\"exit\",\n\t\"suspend\",\n\t\"cycleThinkingLevel\",\n\t\"cycleModelForward\",\n\t\"cycleModelBackward\",\n\t\"selectModel\",\n\t\"expandTools\",\n\t\"toggleThinking\",\n\t\"toggleSessionNamedFilter\",\n\t\"externalEditor\",\n\t\"followUp\",\n\t\"dequeue\",\n\t\"pasteImage\",\n\t\"newSession\",\n\t\"tree\",\n\t\"fork\",\n\t\"resume\",\n];\n\nfunction isAppAction(action: string): action is AppAction {\n\treturn APP_ACTIONS.includes(action as AppAction);\n}\n\n/**\n * Manages all keybindings (app + editor).\n */\nexport class KeybindingsManager {\n\tprivate config: KeybindingsConfig;\n\tprivate configPath: string | undefined;\n\tprivate appActionToKeys: Map<AppAction, KeyId[]>;\n\n\tprivate constructor(config: KeybindingsConfig, configPath?: string) {\n\t\tthis.config = config;\n\t\tthis.configPath = configPath;\n\t\tthis.appActionToKeys = new Map();\n\t\tthis.buildMaps();\n\t}\n\n\t/**\n\t * Create from config file and set up editor keybindings.\n\t */\n\tstatic create(agentDir: string = getAgentDir()): KeybindingsManager {\n\t\tconst configPath = join(agentDir, \"keybindings.json\");\n\t\tconst config = KeybindingsManager.loadFromFile(configPath);\n\t\tconst manager = new KeybindingsManager(config, configPath);\n\t\tmanager.applyEditorKeybindings();\n\t\treturn manager;\n\t}\n\n\t/**\n\t * Create in-memory.\n\t */\n\tstatic inMemory(config: KeybindingsConfig = {}): KeybindingsManager {\n\t\treturn new KeybindingsManager(config);\n\t}\n\n\treload(): void {\n\t\tif (!this.configPath) return;\n\t\tthis.config = KeybindingsManager.loadFromFile(this.configPath);\n\t\tthis.buildMaps();\n\t\tthis.applyEditorKeybindings();\n\t}\n\n\tprivate static loadFromFile(path: string): KeybindingsConfig {\n\t\tif (!existsSync(path)) return {};\n\t\ttry {\n\t\t\treturn JSON.parse(readFileSync(path, \"utf-8\"));\n\t\t} catch {\n\t\t\treturn {};\n\t\t}\n\t}\n\n\tprivate buildMaps(): void {\n\t\tthis.appActionToKeys.clear();\n\n\t\t// Set defaults for app actions\n\t\tfor (const [action, keys] of Object.entries(DEFAULT_APP_KEYBINDINGS)) {\n\t\t\tconst keyArray = Array.isArray(keys) ? keys : [keys];\n\t\t\tthis.appActionToKeys.set(action as AppAction, [...keyArray]);\n\t\t}\n\n\t\t// Override with user config (app actions only)\n\t\tfor (const [action, keys] of Object.entries(this.config)) {\n\t\t\tif (keys === undefined || !isAppAction(action)) continue;\n\t\t\tconst keyArray = Array.isArray(keys) ? keys : [keys];\n\t\t\tthis.appActionToKeys.set(action, keyArray);\n\t\t}\n\t}\n\n\tprivate applyEditorKeybindings(): void {\n\t\tconst editorConfig: EditorKeybindingsConfig = {};\n\t\tfor (const [action, keys] of Object.entries(this.config)) {\n\t\t\tif (!isAppAction(action) || action === \"expandTools\") {\n\t\t\t\teditorConfig[action as EditorAction] = keys;\n\t\t\t}\n\t\t}\n\t\tsetEditorKeybindings(new EditorKeybindingsManager(editorConfig));\n\t}\n\n\t/**\n\t * Check if input matches an app action.\n\t */\n\tmatches(data: string, action: AppAction): boolean {\n\t\tconst keys = this.appActionToKeys.get(action);\n\t\tif (!keys) return false;\n\t\tfor (const key of keys) {\n\t\t\tif (matchesKey(data, key)) return true;\n\t\t}\n\t\treturn false;\n\t}\n\n\t/**\n\t * Get keys bound to an app action.\n\t */\n\tgetKeys(action: AppAction): KeyId[] {\n\t\treturn this.appActionToKeys.get(action) ?? [];\n\t}\n\n\t/**\n\t * Get the full effective config.\n\t */\n\tgetEffectiveConfig(): Required<KeybindingsConfig> {\n\t\tconst result = { ...DEFAULT_KEYBINDINGS };\n\t\tfor (const [action, keys] of Object.entries(this.config)) {\n\t\t\tif (keys !== undefined) {\n\t\t\t\t(result as KeybindingsConfig)[action as KeyAction] = keys;\n\t\t\t}\n\t\t}\n\t\treturn result;\n\t}\n}\n\n// Re-export for convenience\nexport type { EditorAction, KeyId };\n"]}

package/dist/core/package-manager.d.ts

@@ -24,6 +24,12 @@ export interface ProgressEvent {
     message?: string;
 }
 export type ProgressCallback = (event: ProgressEvent) => void;
+export interface PackageUpdate {
+    source: string;
+    displayName: string;
+    type: "npm" | "git";
+    scope: Exclude<SourceScope, "temporary">;
+}
 export interface PackageManager {
     resolve(onMissing?: (source: string) => Promise<MissingSourceAction>): Promise<ResolvedPaths>;
     install(source: string, options?: {
@@ -83,6 +89,7 @@ export declare class DefaultPackageManager implements PackageManager {
     }): Promise<void>;
     update(source?: string): Promise<void>;
     private updateSourceForScope;
+    checkForAvailableUpdates(): Promise<PackageUpdate[]>;
     private resolvePackageSources;
     private resolveLocalExtensionSource;
     private installParsedSource;
@@ -92,9 +99,15 @@ export declare class DefaultPackageManager implements PackageManager {
     private packageSourcesMatch;
     private normalizePackageSourceForSettings;
     private parseSource;
-    private npmNeedsUpdate;
+    private installedNpmMatchesPinnedVersion;
+    private npmHasAvailableUpdate;
     private getInstalledNpmVersion;
     private getLatestNpmVersion;
+    private gitHasAvailableUpdate;
+    private getRemoteGitHead;
+    private getGitUpstreamRef;
+    private runGitRemoteCommand;
+    private runWithConcurrency;
     /**
      * Get a unique identity for a package, ignoring version/ref.
      * Used to detect when the same package is in both global and project settings.
@@ -148,6 +161,7 @@ export declare class DefaultPackageManager implements PackageManager {
     private addResource;
     private createAccumulator;
     private toResolvedPaths;
+    private runCommandCapture;
     private runCommand;
     private runCommandSync;
 }

package/dist/core/package-manager.d.ts.map

@@ -1 +1 @@
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string[];\n}\n\ninterface ResourceAccumulator {\n\textensions: Map<string, { metadata: PathMetadata; enabled: boolean }>;\n\tskills: Map<string, { metadata: PathMetadata; enabled: boolean }>;\n\tprompts: Map<string, { metadata: PathMetadata; enabled: boolean }>;\n\tthemes: Map<string, { metadata: PathMetadata; enabled: boolean }>;\n}\n\ninterface PackageFilter {\n\textensions?: string[];\n\tskills?: string[];\n\tprompts?: string[];\n\tthemes?: string[];\n}\n\ntype ResourceType = \"extensions\" | \"skills\" | \"prompts\" | \"themes\";\n\nconst RESOURCE_TYPES: ResourceType[] = [\"extensions\", \"skills\", \"prompts\", \"themes\"];\n\nconst FILE_PATTERNS: Record<ResourceType, RegExp> = {\n\textensions: /\\.(ts|js)$/,\n\tskills: /\\.md$/,\n\tprompts: /\\.md$/,\n\tthemes: /\\.json$/,\n};\n\nconst IGNORE_FILE_NAMES = [\".gitignore\", \".ignore\", \".fdignore\"];\n\ntype IgnoreMatcher = ReturnType<typeof ignore>;\n\nfunction toPosixPath(p: string): string {\n\treturn p.split(sep).join(\"/\");\n}\n\nfunction getHomeDir(): string {\n\treturn process.env.HOME || homedir();\n}\n\nfunction prefixIgnorePattern(line: string, prefix: string): string | null {\n\tconst trimmed = line.trim();\n\tif (!trimmed) return null;\n\tif (trimmed.startsWith(\"#\") && !trimmed.startsWith(\"\\\\#\")) return null;\n\n\tlet pattern = line;\n\tlet negated = false;\n\n\tif (pattern.startsWith(\"!\")) {\n\t\tnegated = true;\n\t\tpattern = pattern.slice(1);\n\t} else if (pattern.startsWith(\"\\\\!\")) {\n\t\tpattern = pattern.slice(1);\n\t}\n\n\tif (pattern.startsWith(\"/\")) {\n\t\tpattern = pattern.slice(1);\n\t}\n\n\tconst prefixed = prefix ? `${prefix}${pattern}` : pattern;\n\treturn negated ? `!${prefixed}` : prefixed;\n}\n\nfunction addIgnoreRules(ig: IgnoreMatcher, dir: string, rootDir: string): void {\n\tconst relativeDir = relative(rootDir, dir);\n\tconst prefix = relativeDir ? `${toPosixPath(relativeDir)}/` : \"\";\n\n\tfor (const filename of IGNORE_FILE_NAMES) {\n\t\tconst ignorePath = join(dir, filename);\n\t\tif (!existsSync(ignorePath)) continue;\n\t\ttry {\n\t\t\tconst content = readFileSync(ignorePath, \"utf-8\");\n\t\t\tconst patterns = content\n\t\t\t\t.split(/\\r?\\n/)\n\t\t\t\t.map((line) => prefixIgnorePattern(line, prefix))\n\t\t\t\t.filter((line): line is string => Boolean(line));\n\t\t\tif (patterns.length > 0) {\n\t\t\t\tig.add(patterns);\n\t\t\t}\n\t\t} catch {}\n\t}\n}\n\nfunction isPattern(s: string): boolean {\n\treturn s.startsWith(\"!\") || s.startsWith(\"+\") || s.startsWith(\"-\") || s.includes(\"*\") || s.includes(\"?\");\n}\n\nfunction splitPatterns(entries: string[]): { plain: string[]; patterns: string[] } {\n\tconst plain: string[] = [];\n\tconst patterns: string[] = [];\n\tfor (const entry of entries) {\n\t\tif (isPattern(entry)) {\n\t\t\tpatterns.push(entry);\n\t\t} else {\n\t\t\tplain.push(entry);\n\t\t}\n\t}\n\treturn { plain, patterns };\n}\n\nfunction collectFiles(\n\tdir: string,\n\tfilePattern: RegExp,\n\tskipNodeModules = true,\n\tignoreMatcher?: IgnoreMatcher,\n\trootDir?: string,\n): string[] {\n\tconst files: string[] = [];\n\tif (!existsSync(dir)) return files;\n\n\tconst root = rootDir ?? dir;\n\tconst ig = ignoreMatcher ?? ignore();\n\taddIgnoreRules(ig, dir, root);\n\n\ttry {\n\t\tconst entries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of entries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (skipNodeModules && entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isDir = entry.isDirectory();\n\t\t\tlet isFile = entry.isFile();\n\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tconst stats = statSync(fullPath);\n\t\t\t\t\tisDir = stats.isDirectory();\n\t\t\t\t\tisFile = stats.isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(root, fullPath));\n\t\t\tconst ignorePath = isDir ? `${relPath}/` : relPath;\n\t\t\tif (ig.ignores(ignorePath)) continue;\n\n\t\t\tif (isDir) {\n\t\t\t\tfiles.push(...collectFiles(fullPath, filePattern, skipNodeModules, ig, root));\n\t\t\t} else if (isFile && filePattern.test(entry.name)) {\n\t\t\t\tfiles.push(fullPath);\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn files;\n}\n\nfunction collectSkillEntries(\n\tdir: string,\n\tincludeRootFiles = true,\n\tignoreMatcher?: IgnoreMatcher,\n\trootDir?: string,\n): string[] {\n\tconst entries: string[] = [];\n\tif (!existsSync(dir)) return entries;\n\n\tconst root = rootDir ?? dir;\n\tconst ig = ignoreMatcher ?? ignore();\n\taddIgnoreRules(ig, dir, root);\n\n\ttry {\n\t\tconst dirEntries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of dirEntries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isDir = entry.isDirectory();\n\t\t\tlet isFile = entry.isFile();\n\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tconst stats = statSync(fullPath);\n\t\t\t\t\tisDir = stats.isDirectory();\n\t\t\t\t\tisFile = stats.isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(root, fullPath));\n\t\t\tconst ignorePath = isDir ? `${relPath}/` : relPath;\n\t\t\tif (ig.ignores(ignorePath)) continue;\n\n\t\t\tif (isDir) {\n\t\t\t\tentries.push(...collectSkillEntries(fullPath, false, ig, root));\n\t\t\t} else if (isFile) {\n\t\t\t\tconst isRootMd = includeRootFiles && entry.name.endsWith(\".md\");\n\t\t\t\tconst isSkillMd = !includeRootFiles && entry.name === \"SKILL.md\";\n\t\t\t\tif (isRootMd || isSkillMd) {\n\t\t\t\t\tentries.push(fullPath);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn entries;\n}\n\nfunction collectAutoSkillEntries(dir: string, includeRootFiles = true): string[] {\n\treturn collectSkillEntries(dir, includeRootFiles);\n}\n\nfunction findGitRepoRoot(startDir: string): string | null {\n\tlet dir = resolve(startDir);\n\twhile (true) {\n\t\tif (existsSync(join(dir, \".git\"))) {\n\t\t\treturn dir;\n\t\t}\n\t\tconst parent = dirname(dir);\n\t\tif (parent === dir) {\n\t\t\treturn null;\n\t\t}\n\t\tdir = parent;\n\t}\n}\n\nfunction collectAncestorAgentsSkillDirs(startDir: string): string[] {\n\tconst skillDirs: string[] = [];\n\tconst resolvedStartDir = resolve(startDir);\n\tconst gitRepoRoot = findGitRepoRoot(resolvedStartDir);\n\n\tlet dir = resolvedStartDir;\n\twhile (true) {\n\t\tskillDirs.push(join(dir, \".agents\", \"skills\"));\n\t\tif (gitRepoRoot && dir === gitRepoRoot) {\n\t\t\tbreak;\n\t\t}\n\t\tconst parent = dirname(dir);\n\t\tif (parent === dir) {\n\t\t\tbreak;\n\t\t}\n\t\tdir = parent;\n\t}\n\n\treturn skillDirs;\n}\n\nfunction collectAutoPromptEntries(dir: string): string[] {\n\tconst entries: string[] = [];\n\tif (!existsSync(dir)) return entries;\n\n\tconst ig = ignore();\n\taddIgnoreRules(ig, dir, dir);\n\n\ttry {\n\t\tconst dirEntries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of dirEntries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isFile = entry.isFile();\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tisFile = statSync(fullPath).isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(dir, fullPath));\n\t\t\tif (ig.ignores(relPath)) continue;\n\n\t\t\tif (isFile && entry.name.endsWith(\".md\")) {\n\t\t\t\tentries.push(fullPath);\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn entries;\n}\n\nfunction collectAutoThemeEntries(dir: string): string[] {\n\tconst entries: string[] = [];\n\tif (!existsSync(dir)) return entries;\n\n\tconst ig = ignore();\n\taddIgnoreRules(ig, dir, dir);\n\n\ttry {\n\t\tconst dirEntries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of dirEntries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isFile = entry.isFile();\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tisFile = statSync(fullPath).isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(dir, fullPath));\n\t\t\tif (ig.ignores(relPath)) continue;\n\n\t\t\tif (isFile && entry.name.endsWith(\".json\")) {\n\t\t\t\tentries.push(fullPath);\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn entries;\n}\n\nfunction readPiManifestFile(packageJsonPath: string): PiManifest | null {\n\ttry {\n\t\tconst content = readFileSync(packageJsonPath, \"utf-8\");\n\t\tconst pkg = JSON.parse(content) as { pi?: PiManifest };\n\t\treturn pkg.pi ?? null;\n\t} catch {\n\t\treturn null;\n\t}\n}\n\nfunction resolveExtensionEntries(dir: string): string[] | null {\n\tconst packageJsonPath = join(dir, \"package.json\");\n\tif (existsSync(packageJsonPath)) {\n\t\tconst manifest = readPiManifestFile(packageJsonPath);\n\t\tif (manifest?.extensions?.length) {\n\t\t\tconst entries: string[] = [];\n\t\t\tfor (const extPath of manifest.extensions) {\n\t\t\t\tconst resolvedExtPath = resolve(dir, extPath);\n\t\t\t\tif (existsSync(resolvedExtPath)) {\n\t\t\t\t\tentries.push(resolvedExtPath);\n\t\t\t\t}\n\t\t\t}\n\t\t\tif (entries.length > 0) {\n\t\t\t\treturn entries;\n\t\t\t}\n\t\t}\n\t}\n\n\tconst indexTs = join(dir, \"index.ts\");\n\tconst indexJs = join(dir, \"index.js\");\n\tif (existsSync(indexTs)) {\n\t\treturn [indexTs];\n\t}\n\tif (existsSync(indexJs)) {\n\t\treturn [indexJs];\n\t}\n\n\treturn null;\n}\n\nfunction collectAutoExtensionEntries(dir: string): string[] {\n\tconst entries: string[] = [];\n\tif (!existsSync(dir)) return entries;\n\n\t// First check if this directory itself has explicit extension entries (package.json or index)\n\tconst rootEntries = resolveExtensionEntries(dir);\n\tif (rootEntries) {\n\t\treturn rootEntries;\n\t}\n\n\t// Otherwise, discover extensions from directory contents\n\tconst ig = ignore();\n\taddIgnoreRules(ig, dir, dir);\n\n\ttry {\n\t\tconst dirEntries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of dirEntries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isDir = entry.isDirectory();\n\t\t\tlet isFile = entry.isFile();\n\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tconst stats = statSync(fullPath);\n\t\t\t\t\tisDir = stats.isDirectory();\n\t\t\t\t\tisFile = stats.isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(dir, fullPath));\n\t\t\tconst ignorePath = isDir ? `${relPath}/` : relPath;\n\t\t\tif (ig.ignores(ignorePath)) continue;\n\n\t\t\tif (isFile && (entry.name.endsWith(\".ts\") || entry.name.endsWith(\".js\"))) {\n\t\t\t\tentries.push(fullPath);\n\t\t\t} else if (isDir) {\n\t\t\t\tconst resolvedEntries = resolveExtensionEntries(fullPath);\n\t\t\t\tif (resolvedEntries) {\n\t\t\t\t\tentries.push(...resolvedEntries);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn entries;\n}\n\n/**\n * Collect resource files from a directory based on resource type.\n * Extensions use smart discovery (index.ts in subdirs), others use recursive collection.\n */\nfunction collectResourceFiles(dir: string, resourceType: ResourceType): string[] {\n\tif (resourceType === \"skills\") {\n\t\treturn collectSkillEntries(dir);\n\t}\n\tif (resourceType === \"extensions\") {\n\t\treturn collectAutoExtensionEntries(dir);\n\t}\n\treturn collectFiles(dir, FILE_PATTERNS[resourceType]);\n}\n\nfunction matchesAnyPattern(filePath: string, patterns: string[], baseDir: string): boolean {\n\tconst rel = toPosixPath(relative(baseDir, filePath));\n\tconst name = basename(filePath);\n\tconst filePathPosix = toPosixPath(filePath);\n\tconst isSkillFile = name === \"SKILL.md\";\n\tconst parentDir = isSkillFile ? dirname(filePath) : undefined;\n\tconst parentRel = isSkillFile ? toPosixPath(relative(baseDir, parentDir!)) : undefined;\n\tconst parentName = isSkillFile ? basename(parentDir!) : undefined;\n\tconst parentDirPosix = isSkillFile ? toPosixPath(parentDir!) : undefined;\n\n\treturn patterns.some((pattern) => {\n\t\tconst normalizedPattern = toPosixPath(pattern);\n\t\tif (\n\t\t\tminimatch(rel, normalizedPattern) ||\n\t\t\tminimatch(name, normalizedPattern) ||\n\t\t\tminimatch(filePathPosix, normalizedPattern)\n\t\t) {\n\t\t\treturn true;\n\t\t}\n\t\tif (!isSkillFile) return false;\n\t\treturn (\n\t\t\tminimatch(parentRel!, normalizedPattern) ||\n\t\t\tminimatch(parentName!, normalizedPattern) ||\n\t\t\tminimatch(parentDirPosix!, normalizedPattern)\n\t\t);\n\t});\n}\n\nfunction normalizeExactPattern(pattern: string): string {\n\tconst normalized = pattern.startsWith(\"./\") || pattern.startsWith(\".\\\\\") ? pattern.slice(2) : pattern;\n\treturn toPosixPath(normalized);\n}\n\nfunction matchesAnyExactPattern(filePath: string, patterns: string[], baseDir: string): boolean {\n\tif (patterns.length === 0) return false;\n\tconst rel = toPosixPath(relative(baseDir, filePath));\n\tconst name = basename(filePath);\n\tconst filePathPosix = toPosixPath(filePath);\n\tconst isSkillFile = name === \"SKILL.md\";\n\tconst parentDir = isSkillFile ? dirname(filePath) : undefined;\n\tconst parentRel = isSkillFile ? toPosixPath(relative(baseDir, parentDir!)) : undefined;\n\tconst parentDirPosix = isSkillFile ? toPosixPath(parentDir!) : undefined;\n\n\treturn patterns.some((pattern) => {\n\t\tconst normalized = normalizeExactPattern(pattern);\n\t\tif (normalized === rel || normalized === filePathPosix) {\n\t\t\treturn true;\n\t\t}\n\t\tif (!isSkillFile) return false;\n\t\treturn normalized === parentRel || normalized === parentDirPosix;\n\t});\n}\n\nfunction getOverridePatterns(entries: string[]): string[] {\n\treturn entries.filter((pattern) => pattern.startsWith(\"!\") || pattern.startsWith(\"+\") || pattern.startsWith(\"-\"));\n}\n\nfunction isEnabledByOverrides(filePath: string, patterns: string[], baseDir: string): boolean {\n\tconst overrides = getOverridePatterns(patterns);\n\tconst excludes = overrides.filter((pattern) => pattern.startsWith(\"!\")).map((pattern) => pattern.slice(1));\n\tconst forceIncludes = overrides.filter((pattern) => pattern.startsWith(\"+\")).map((pattern) => pattern.slice(1));\n\tconst forceExcludes = overrides.filter((pattern) => pattern.startsWith(\"-\")).map((pattern) => pattern.slice(1));\n\n\tlet enabled = true;\n\tif (excludes.length > 0 && matchesAnyPattern(filePath, excludes, baseDir)) {\n\t\tenabled = false;\n\t}\n\tif (forceIncludes.length > 0 && matchesAnyExactPattern(filePath, forceIncludes, baseDir)) {\n\t\tenabled = true;\n\t}\n\tif (forceExcludes.length > 0 && matchesAnyExactPattern(filePath, forceExcludes, baseDir)) {\n\t\tenabled = false;\n\t}\n\treturn enabled;\n}\n\n/**\n * Apply patterns to paths and return a Set of enabled paths.\n * Pattern types:\n * - Plain patterns: include matching paths\n * - `!pattern`: exclude matching paths\n * - `+path`: force-include exact path (overrides exclusions)\n * - `-path`: force-exclude exact path (overrides force-includes)\n */\nfunction applyPatterns(allPaths: string[], patterns: string[], baseDir: string): Set<string> {\n\tconst includes: string[] = [];\n\tconst excludes: string[] = [];\n\tconst forceIncludes: string[] = [];\n\tconst forceExcludes: string[] = [];\n\n\tfor (const p of patterns) {\n\t\tif (p.startsWith(\"+\")) {\n\t\t\tforceIncludes.push(p.slice(1));\n\t\t} else if (p.startsWith(\"-\")) {\n\t\t\tforceExcludes.push(p.slice(1));\n\t\t} else if (p.startsWith(\"!\")) {\n\t\t\texcludes.push(p.slice(1));\n\t\t} else {\n\t\t\tincludes.push(p);\n\t\t}\n\t}\n\n\t// Step 1: Apply includes (or all if no includes)\n\tlet result: string[];\n\tif (includes.length === 0) {\n\t\tresult = [...allPaths];\n\t} else {\n\t\tresult = allPaths.filter((filePath) => matchesAnyPattern(filePath, includes, baseDir));\n\t}\n\n\t// Step 2: Apply excludes\n\tif (excludes.length > 0) {\n\t\tresult = result.filter((filePath) => !matchesAnyPattern(filePath, excludes, baseDir));\n\t}\n\n\t// Step 3: Force-include (add back from allPaths, overriding exclusions)\n\tif (forceIncludes.length > 0) {\n\t\tfor (const filePath of allPaths) {\n\t\t\tif (!result.includes(filePath) && matchesAnyExactPattern(filePath, forceIncludes, baseDir)) {\n\t\t\t\tresult.push(filePath);\n\t\t\t}\n\t\t}\n\t}\n\n\t// Step 4: Force-exclude (remove even if included or force-included)\n\tif (forceExcludes.length > 0) {\n\t\tresult = result.filter((filePath) => !matchesAnyExactPattern(filePath, forceExcludes, baseDir));\n\t}\n\n\treturn new Set(result);\n}\n\nexport class DefaultPackageManager implements PackageManager {\n\tprivate cwd: string;\n\tprivate agentDir: string;\n\tprivate settingsManager: SettingsManager;\n\tprivate globalNpmRoot: string | undefined;\n\tprivate globalNpmRootCommandKey: string | undefined;\n\tprivate progressCallback: ProgressCallback | undefined;\n\n\tconstructor(options: PackageManagerOptions) {\n\t\tthis.cwd = options.cwd;\n\t\tthis.agentDir = options.agentDir;\n\t\tthis.settingsManager = options.settingsManager;\n\t}\n\n\tsetProgressCallback(callback: ProgressCallback | undefined): void {\n\t\tthis.progressCallback = callback;\n\t}\n\n\taddSourceToSettings(source: string, options?: { local?: boolean }): boolean {\n\t\tconst scope: SourceScope = options?.local ? \"project\" : \"user\";\n\t\tconst currentSettings =\n\t\t\tscope === \"project\" ? this.settingsManager.getProjectSettings() : this.settingsManager.getGlobalSettings();\n\t\tconst currentPackages = currentSettings.packages ?? [];\n\t\tconst normalizedSource = this.normalizePackageSourceForSettings(source, scope);\n\t\tconst exists = currentPackages.some((existing) => this.packageSourcesMatch(existing, source, scope));\n\t\tif (exists) {\n\t\t\treturn false;\n\t\t}\n\t\tconst nextPackages = [...currentPackages, normalizedSource];\n\t\tif (scope === \"project\") {\n\t\t\tthis.settingsManager.setProjectPackages(nextPackages);\n\t\t} else {\n\t\t\tthis.settingsManager.setPackages(nextPackages);\n\t\t}\n\t\treturn true;\n\t}\n\n\tremoveSourceFromSettings(source: string, options?: { local?: boolean }): boolean {\n\t\tconst scope: SourceScope = options?.local ? \"project\" : \"user\";\n\t\tconst currentSettings =\n\t\t\tscope === \"project\" ? this.settingsManager.getProjectSettings() : this.settingsManager.getGlobalSettings();\n\t\tconst currentPackages = currentSettings.packages ?? [];\n\t\tconst nextPackages = currentPackages.filter((existing) => !this.packageSourcesMatch(existing, source, scope));\n\t\tconst changed = nextPackages.length !== currentPackages.length;\n\t\tif (!changed) {\n\t\t\treturn false;\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\tthis.settingsManager.setProjectPackages(nextPackages);\n\t\t} else {\n\t\t\tthis.settingsManager.setPackages(nextPackages);\n\t\t}\n\t\treturn true;\n\t}\n\n\tgetInstalledPath(source: string, scope: \"user\" | \"project\"): string | undefined {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\tconst path = this.getNpmInstallPath(parsed, scope);\n\t\t\treturn existsSync(path) ? path : undefined;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\tconst path = this.getGitInstallPath(parsed, scope);\n\t\t\treturn existsSync(path) ? path : undefined;\n\t\t}\n\t\tif (parsed.type === \"local\") {\n\t\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\t\tconst path = this.resolvePathFromBase(parsed.path, baseDir);\n\t\t\treturn existsSync(path) ? path : undefined;\n\t\t}\n\t\treturn undefined;\n\t}\n\n\tprivate emitProgress(event: ProgressEvent): void {\n\t\tthis.progressCallback?.(event);\n\t}\n\n\tprivate async withProgress(\n\t\taction: ProgressEvent[\"action\"],\n\t\tsource: string,\n\t\tmessage: string,\n\t\toperation: () => Promise<void>,\n\t): Promise<void> {\n\t\tthis.emitProgress({ type: \"start\", action, source, message });\n\t\ttry {\n\t\t\tawait operation();\n\t\t\tthis.emitProgress({ type: \"complete\", action, source });\n\t\t} catch (error) {\n\t\t\tconst errorMessage = error instanceof Error ? error.message : String(error);\n\t\t\tthis.emitProgress({ type: \"error\", action, source, message: errorMessage });\n\t\t\tthrow error;\n\t\t}\n\t}\n\n\tasync resolve(onMissing?: (source: string) => Promise<MissingSourceAction>): Promise<ResolvedPaths> {\n\t\tconst accumulator = this.createAccumulator();\n\t\tconst globalSettings = this.settingsManager.getGlobalSettings();\n\t\tconst projectSettings = this.settingsManager.getProjectSettings();\n\n\t\t// Collect all packages with scope (project first so cwd resources win collisions)\n\t\tconst allPackages: Array<{ pkg: PackageSource; scope: SourceScope }> = [];\n\t\tfor (const pkg of projectSettings.packages ?? []) {\n\t\t\tallPackages.push({ pkg, scope: \"project\" });\n\t\t}\n\t\tfor (const pkg of globalSettings.packages ?? []) {\n\t\t\tallPackages.push({ pkg, scope: \"user\" });\n\t\t}\n\n\t\t// Dedupe: project scope wins over global for same package identity\n\t\tconst packageSources = this.dedupePackages(allPackages);\n\t\tawait this.resolvePackageSources(packageSources, accumulator, onMissing);\n\n\t\tconst globalBaseDir = this.agentDir;\n\t\tconst projectBaseDir = join(this.cwd, CONFIG_DIR_NAME);\n\n\t\tfor (const resourceType of RESOURCE_TYPES) {\n\t\t\tconst target = this.getTargetMap(accumulator, resourceType);\n\t\t\tconst globalEntries = (globalSettings[resourceType] ?? []) as string[];\n\t\t\tconst projectEntries = (projectSettings[resourceType] ?? []) as string[];\n\t\t\tthis.resolveLocalEntries(\n\t\t\t\tprojectEntries,\n\t\t\t\tresourceType,\n\t\t\t\ttarget,\n\t\t\t\t{\n\t\t\t\t\tsource: \"local\",\n\t\t\t\t\tscope: \"project\",\n\t\t\t\t\torigin: \"top-level\",\n\t\t\t\t},\n\t\t\t\tprojectBaseDir,\n\t\t\t);\n\t\t\tthis.resolveLocalEntries(\n\t\t\t\tglobalEntries,\n\t\t\t\tresourceType,\n\t\t\t\ttarget,\n\t\t\t\t{\n\t\t\t\t\tsource: \"local\",\n\t\t\t\t\tscope: \"user\",\n\t\t\t\t\torigin: \"top-level\",\n\t\t\t\t},\n\t\t\t\tglobalBaseDir,\n\t\t\t);\n\t\t}\n\n\t\tthis.addAutoDiscoveredResources(accumulator, globalSettings, projectSettings, globalBaseDir, projectBaseDir);\n\n\t\treturn this.toResolvedPaths(accumulator);\n\t}\n\n\tasync resolveExtensionSources(\n\t\tsources: string[],\n\t\toptions?: { local?: boolean; temporary?: boolean },\n\t): Promise<ResolvedPaths> {\n\t\tconst accumulator = this.createAccumulator();\n\t\tconst scope: SourceScope = options?.temporary ? \"temporary\" : options?.local ? \"project\" : \"user\";\n\t\tconst packageSources = sources.map((source) => ({ pkg: source as PackageSource, scope }));\n\t\tawait this.resolvePackageSources(packageSources, accumulator);\n\t\treturn this.toResolvedPaths(accumulator);\n\t}\n\n\tasync install(source: string, options?: { local?: boolean }): Promise<void> {\n\t\tconst parsed = this.parseSource(source);\n\t\tconst scope: SourceScope = options?.local ? \"project\" : \"user\";\n\t\tawait this.withProgress(\"install\", source, `Installing ${source}...`, async () => {\n\t\t\tif (parsed.type === \"npm\") {\n\t\t\t\tawait this.installNpm(parsed, scope, false);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (parsed.type === \"git\") {\n\t\t\t\tawait this.installGit(parsed, scope);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (parsed.type === \"local\") {\n\t\t\t\tconst resolved = this.resolvePath(parsed.path);\n\t\t\t\tif (!existsSync(resolved)) {\n\t\t\t\t\tthrow new Error(`Path does not exist: ${resolved}`);\n\t\t\t\t}\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tthrow new Error(`Unsupported install source: ${source}`);\n\t\t});\n\t}\n\n\tasync remove(source: string, options?: { local?: boolean }): Promise<void> {\n\t\tconst parsed = this.parseSource(source);\n\t\tconst scope: SourceScope = options?.local ? \"project\" : \"user\";\n\t\tawait this.withProgress(\"remove\", source, `Removing ${source}...`, async () => {\n\t\t\tif (parsed.type === \"npm\") {\n\t\t\t\tawait this.uninstallNpm(parsed, scope);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (parsed.type === \"git\") {\n\t\t\t\tawait this.removeGit(parsed, scope);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (parsed.type === \"local\") {\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tthrow new Error(`Unsupported remove source: ${source}`);\n\t\t});\n\t}\n\n\tasync update(source?: string): Promise<void> {\n\t\tconst globalSettings = this.settingsManager.getGlobalSettings();\n\t\tconst projectSettings = this.settingsManager.getProjectSettings();\n\t\tconst identity = source ? this.getPackageIdentity(source) : undefined;\n\n\t\tfor (const pkg of globalSettings.packages ?? []) {\n\t\t\tconst sourceStr = typeof pkg === \"string\" ? pkg : pkg.source;\n\t\t\tif (identity && this.getPackageIdentity(sourceStr, \"user\") !== identity) continue;\n\t\t\tawait this.updateSourceForScope(sourceStr, \"user\");\n\t\t}\n\t\tfor (const pkg of projectSettings.packages ?? []) {\n\t\t\tconst sourceStr = typeof pkg === \"string\" ? pkg : pkg.source;\n\t\t\tif (identity && this.getPackageIdentity(sourceStr, \"project\") !== identity) continue;\n\t\t\tawait this.updateSourceForScope(sourceStr, \"project\");\n\t\t}\n\t}\n\n\tprivate async updateSourceForScope(source: string, scope: SourceScope): Promise<void> {\n\t\tif (isOfflineModeEnabled()) {\n\t\t\treturn;\n\t\t}\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\tif (parsed.pinned) return;\n\t\t\tawait this.withProgress(\"update\", source, `Updating ${source}...`, async () => {\n\t\t\t\tawait this.installNpm(parsed, scope, false);\n\t\t\t});\n\t\t\treturn;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\tif (parsed.pinned) return;\n\t\t\tawait this.withProgress(\"update\", source, `Updating ${source}...`, async () => {\n\t\t\t\tawait this.updateGit(parsed, scope);\n\t\t\t});\n\t\t\treturn;\n\t\t}\n\t}\n\n\tprivate async resolvePackageSources(\n\t\tsources: Array<{ pkg: PackageSource; scope: SourceScope }>,\n\t\taccumulator: ResourceAccumulator,\n\t\tonMissing?: (source: string) => Promise<MissingSourceAction>,\n\t): Promise<void> {\n\t\tfor (const { pkg, scope } of sources) {\n\t\t\tconst sourceStr = typeof pkg === \"string\" ? pkg : pkg.source;\n\t\t\tconst filter = typeof pkg === \"object\" ? pkg : undefined;\n\t\t\tconst parsed = this.parseSource(sourceStr);\n\t\t\tconst metadata: PathMetadata = { source: sourceStr, scope, origin: \"package\" };\n\n\t\t\tif (parsed.type === \"local\") {\n\t\t\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\t\t\tthis.resolveLocalExtensionSource(parsed, accumulator, filter, metadata, baseDir);\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tconst installMissing = async (): Promise<boolean> => {\n\t\t\t\tif (isOfflineModeEnabled()) {\n\t\t\t\t\treturn false;\n\t\t\t\t}\n\t\t\t\tif (!onMissing) {\n\t\t\t\t\tawait this.installParsedSource(parsed, scope);\n\t\t\t\t\treturn true;\n\t\t\t\t}\n\t\t\t\tconst action = await onMissing(sourceStr);\n\t\t\t\tif (action === \"skip\") return false;\n\t\t\t\tif (action === \"error\") throw new Error(`Missing source: ${sourceStr}`);\n\t\t\t\tawait this.installParsedSource(parsed, scope);\n\t\t\t\treturn true;\n\t\t\t};\n\n\t\t\tif (parsed.type === \"npm\") {\n\t\t\t\tconst installedPath = this.getNpmInstallPath(parsed, scope);\n\t\t\t\tconst needsInstall = !existsSync(installedPath) || (await this.npmNeedsUpdate(parsed, installedPath));\n\t\t\t\tif (needsInstall) {\n\t\t\t\t\tconst installed = await installMissing();\n\t\t\t\t\tif (!installed) continue;\n\t\t\t\t}\n\t\t\t\tmetadata.baseDir = installedPath;\n\t\t\t\tthis.collectPackageResources(installedPath, accumulator, filter, metadata);\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tif (parsed.type === \"git\") {\n\t\t\t\tconst installedPath = this.getGitInstallPath(parsed, scope);\n\t\t\t\tif (!existsSync(installedPath)) {\n\t\t\t\t\tconst installed = await installMissing();\n\t\t\t\t\tif (!installed) continue;\n\t\t\t\t} else if (scope === \"temporary\" && !parsed.pinned && !isOfflineModeEnabled()) {\n\t\t\t\t\tawait this.refreshTemporaryGitSource(parsed, sourceStr);\n\t\t\t\t}\n\t\t\t\tmetadata.baseDir = installedPath;\n\t\t\t\tthis.collectPackageResources(installedPath, accumulator, filter, metadata);\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate resolveLocalExtensionSource(\n\t\tsource: LocalSource,\n\t\taccumulator: ResourceAccumulator,\n\t\tfilter: PackageFilter | undefined,\n\t\tmetadata: PathMetadata,\n\t\tbaseDir: string,\n\t): void {\n\t\tconst resolved = this.resolvePathFromBase(source.path, baseDir);\n\t\tif (!existsSync(resolved)) {\n\t\t\treturn;\n\t\t}\n\n\t\ttry {\n\t\t\tconst stats = statSync(resolved);\n\t\t\tif (stats.isFile()) {\n\t\t\t\tmetadata.baseDir = dirname(resolved);\n\t\t\t\tthis.addResource(accumulator.extensions, resolved, metadata, true);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (stats.isDirectory()) {\n\t\t\t\tmetadata.baseDir = resolved;\n\t\t\t\tconst resources = this.collectPackageResources(resolved, accumulator, filter, metadata);\n\t\t\t\tif (!resources) {\n\t\t\t\t\tthis.addResource(accumulator.extensions, resolved, metadata, true);\n\t\t\t\t}\n\t\t\t}\n\t\t} catch {\n\t\t\treturn;\n\t\t}\n\t}\n\n\tprivate async installParsedSource(parsed: ParsedSource, scope: SourceScope): Promise<void> {\n\t\tif (parsed.type === \"npm\") {\n\t\t\tawait this.installNpm(parsed, scope, scope === \"temporary\");\n\t\t\treturn;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\tawait this.installGit(parsed, scope);\n\t\t\treturn;\n\t\t}\n\t}\n\n\tprivate getPackageSourceString(pkg: PackageSource): string {\n\t\treturn typeof pkg === \"string\" ? pkg : pkg.source;\n\t}\n\n\tprivate getSourceMatchKeyForInput(source: string): string {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\treturn `npm:${parsed.name}`;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\treturn `git:${parsed.host}/${parsed.path}`;\n\t\t}\n\t\treturn `local:${this.resolvePath(parsed.path)}`;\n\t}\n\n\tprivate getSourceMatchKeyForSettings(source: string, scope: SourceScope): string {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\treturn `npm:${parsed.name}`;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\treturn `git:${parsed.host}/${parsed.path}`;\n\t\t}\n\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\treturn `local:${this.resolvePathFromBase(parsed.path, baseDir)}`;\n\t}\n\n\tprivate packageSourcesMatch(existing: PackageSource, inputSource: string, scope: SourceScope): boolean {\n\t\tconst left = this.getSourceMatchKeyForSettings(this.getPackageSourceString(existing), scope);\n\t\tconst right = this.getSourceMatchKeyForInput(inputSource);\n\t\treturn left === right;\n\t}\n\n\tprivate normalizePackageSourceForSettings(source: string, scope: SourceScope): string {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type !== \"local\") {\n\t\t\treturn source;\n\t\t}\n\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\tconst resolved = this.resolvePath(parsed.path);\n\t\tconst rel = relative(baseDir, resolved);\n\t\treturn rel || \".\";\n\t}\n\n\tprivate parseSource(source: string): ParsedSource {\n\t\tif (source.startsWith(\"npm:\")) {\n\t\t\tconst spec = source.slice(\"npm:\".length).trim();\n\t\t\tconst { name, version } = this.parseNpmSpec(spec);\n\t\t\treturn {\n\t\t\t\ttype: \"npm\",\n\t\t\t\tspec,\n\t\t\t\tname,\n\t\t\t\tpinned: Boolean(version),\n\t\t\t};\n\t\t}\n\n\t\tconst trimmed = source.trim();\n\t\tconst isWindowsAbsolutePath = /^[A-Za-z]:[\\\\/]|^\\\\\\\\/.test(trimmed);\n\t\tconst isLocalPathLike =\n\t\t\ttrimmed.startsWith(\".\") ||\n\t\t\ttrimmed.startsWith(\"/\") ||\n\t\t\ttrimmed === \"~\" ||\n\t\t\ttrimmed.startsWith(\"~/\") ||\n\t\t\tisWindowsAbsolutePath;\n\t\tif (isLocalPathLike) {\n\t\t\treturn { type: \"local\", path: source };\n\t\t}\n\n\t\t// Try parsing as git URL\n\t\tconst gitParsed = parseGitUrl(source);\n\t\tif (gitParsed) {\n\t\t\treturn gitParsed;\n\t\t}\n\n\t\treturn { type: \"local\", path: source };\n\t}\n\n\t/**\n\t * Check if an npm package needs to be updated.\n\t * - For unpinned packages: check if registry has a newer version\n\t * - For pinned packages: check if installed version matches the pinned version\n\t */\n\tprivate async npmNeedsUpdate(source: NpmSource, installedPath: string): Promise<boolean> {\n\t\tif (isOfflineModeEnabled()) {\n\t\t\treturn false;\n\t\t}\n\n\t\tconst installedVersion = this.getInstalledNpmVersion(installedPath);\n\t\tif (!installedVersion) return true;\n\n\t\tconst { version: pinnedVersion } = this.parseNpmSpec(source.spec);\n\t\tif (pinnedVersion) {\n\t\t\t// Pinned: check if installed matches pinned (exact match for now)\n\t\t\treturn installedVersion !== pinnedVersion;\n\t\t}\n\n\t\t// Unpinned: check registry for latest version\n\t\ttry {\n\t\t\tconst latestVersion = await this.getLatestNpmVersion(source.name);\n\t\t\treturn latestVersion !== installedVersion;\n\t\t} catch {\n\t\t\t// If we can't check registry, assume it's fine\n\t\t\treturn false;\n\t\t}\n\t}\n\n\tprivate getInstalledNpmVersion(installedPath: string): string | undefined {\n\t\tconst packageJsonPath = join(installedPath, \"package.json\");\n\t\tif (!existsSync(packageJsonPath)) return undefined;\n\t\ttry {\n\t\t\tconst content = readFileSync(packageJsonPath, \"utf-8\");\n\t\t\tconst pkg = JSON.parse(content) as { version?: string };\n\t\t\treturn pkg.version;\n\t\t} catch {\n\t\t\treturn undefined;\n\t\t}\n\t}\n\n\tprivate async getLatestNpmVersion(packageName: string): Promise<string> {\n\t\tconst response = await fetch(`https://registry.npmjs.org/${packageName}/latest`, {\n\t\t\tsignal: AbortSignal.timeout(NETWORK_TIMEOUT_MS),\n\t\t});\n\t\tif (!response.ok) throw new Error(`Failed to fetch npm registry: ${response.status}`);\n\t\tconst data = (await response.json()) as { version: string };\n\t\treturn data.version;\n\t}\n\n\t/**\n\t * Get a unique identity for a package, ignoring version/ref.\n\t * Used to detect when the same package is in both global and project settings.\n\t * For git packages, uses normalized host/path to ensure SSH and HTTPS URLs\n\t * for the same repository are treated as identical.\n\t */\n\tprivate getPackageIdentity(source: string, scope?: SourceScope): string {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\treturn `npm:${parsed.name}`;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\t// Use host/path for identity to normalize SSH and HTTPS\n\t\t\treturn `git:${parsed.host}/${parsed.path}`;\n\t\t}\n\t\tif (scope) {\n\t\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\t\treturn `local:${this.resolvePathFromBase(parsed.path, baseDir)}`;\n\t\t}\n\t\treturn `local:${this.resolvePath(parsed.path)}`;\n\t}\n\n\t/**\n\t * Dedupe packages: if same package identity appears in both global and project,\n\t * keep only the project one (project wins).\n\t */\n\tprivate dedupePackages(\n\t\tpackages: Array<{ pkg: PackageSource; scope: SourceScope }>,\n\t): Array<{ pkg: PackageSource; scope: SourceScope }> {\n\t\tconst seen = new Map<string, { pkg: PackageSource; scope: SourceScope }>();\n\n\t\tfor (const entry of packages) {\n\t\t\tconst sourceStr = typeof entry.pkg === \"string\" ? entry.pkg : entry.pkg.source;\n\t\t\tconst identity = this.getPackageIdentity(sourceStr, entry.scope);\n\n\t\t\tconst existing = seen.get(identity);\n\t\t\tif (!existing) {\n\t\t\t\tseen.set(identity, entry);\n\t\t\t} else if (entry.scope === \"project\" && existing.scope === \"user\") {\n\t\t\t\t// Project wins over user\n\t\t\t\tseen.set(identity, entry);\n\t\t\t}\n\t\t\t// If existing is project and new is global, keep existing (project)\n\t\t\t// If both are same scope, keep first one\n\t\t}\n\n\t\treturn Array.from(seen.values());\n\t}\n\n\tprivate parseNpmSpec(spec: string): { name: string; version?: string } {\n\t\tconst match = spec.match(/^(@?[^@]+(?:\\/[^@]+)?)(?:@(.+))?$/);\n\t\tif (!match) {\n\t\t\treturn { name: spec };\n\t\t}\n\t\tconst name = match[1] ?? spec;\n\t\tconst version = match[2];\n\t\treturn { name, version };\n\t}\n\n\tprivate getNpmCommand(): { command: string; args: string[] } {\n\t\tconst configuredCommand = this.settingsManager.getNpmCommand();\n\t\tif (!configuredCommand || configuredCommand.length === 0) {\n\t\t\treturn { command: \"npm\", args: [] };\n\t\t}\n\t\tconst [command, ...args] = configuredCommand;\n\t\tif (!command) {\n\t\t\tthrow new Error(\"Invalid npmCommand: first array entry must be a non-empty command\");\n\t\t}\n\t\treturn { command, args };\n\t}\n\n\tprivate async runNpmCommand(args: string[], options?: { cwd?: string }): Promise<void> {\n\t\tconst npmCommand = this.getNpmCommand();\n\t\tawait this.runCommand(npmCommand.command, [...npmCommand.args, ...args], options);\n\t}\n\n\tprivate runNpmCommandSync(args: string[]): string {\n\t\tconst npmCommand = this.getNpmCommand();\n\t\treturn this.runCommandSync(npmCommand.command, [...npmCommand.args, ...args]);\n\t}\n\n\tprivate async installNpm(source: NpmSource, scope: SourceScope, temporary: boolean): Promise<void> {\n\t\tif (scope === \"user\" && !temporary) {\n\t\t\tawait this.runNpmCommand([\"install\", \"-g\", source.spec]);\n\t\t\treturn;\n\t\t}\n\t\tconst installRoot = this.getNpmInstallRoot(scope, temporary);\n\t\tthis.ensureNpmProject(installRoot);\n\t\tawait this.runNpmCommand([\"install\", source.spec, \"--prefix\", installRoot]);\n\t}\n\n\tprivate async uninstallNpm(source: NpmSource, scope: SourceScope): Promise<void> {\n\t\tif (scope === \"user\") {\n\t\t\tawait this.runNpmCommand([\"uninstall\", \"-g\", source.name]);\n\t\t\treturn;\n\t\t}\n\t\tconst installRoot = this.getNpmInstallRoot(scope, false);\n\t\tif (!existsSync(installRoot)) {\n\t\t\treturn;\n\t\t}\n\t\tawait this.runNpmCommand([\"uninstall\", source.name, \"--prefix\", installRoot]);\n\t}\n\n\tprivate async installGit(source: GitSource, scope: SourceScope): Promise<void> {\n\t\tconst targetDir = this.getGitInstallPath(source, scope);\n\t\tif (existsSync(targetDir)) {\n\t\t\treturn;\n\t\t}\n\t\tconst gitRoot = this.getGitInstallRoot(scope);\n\t\tif (gitRoot) {\n\t\t\tthis.ensureGitIgnore(gitRoot);\n\t\t}\n\t\tmkdirSync(dirname(targetDir), { recursive: true });\n\n\t\tawait this.runCommand(\"git\", [\"clone\", source.repo, targetDir]);\n\t\tif (source.ref) {\n\t\t\tawait this.runCommand(\"git\", [\"checkout\", source.ref], { cwd: targetDir });\n\t\t}\n\t\tconst packageJsonPath = join(targetDir, \"package.json\");\n\t\tif (existsSync(packageJsonPath)) {\n\t\t\tawait this.runNpmCommand([\"install\"], { cwd: targetDir });\n\t\t}\n\t}\n\n\tprivate async updateGit(source: GitSource, scope: SourceScope): Promise<void> {\n\t\tconst targetDir = this.getGitInstallPath(source, scope);\n\t\tif (!existsSync(targetDir)) {\n\t\t\tawait this.installGit(source, scope);\n\t\t\treturn;\n\t\t}\n\n\t\t// Fetch latest from remote (handles force-push by getting new history)\n\t\tawait this.runCommand(\"git\", [\"fetch\", \"--prune\", \"origin\"], { cwd: targetDir });\n\n\t\t// Reset to tracking branch. Fall back to origin/HEAD when no upstream is configured.\n\t\ttry {\n\t\t\tawait this.runCommand(\"git\", [\"reset\", \"--hard\", \"@{upstream}\"], { cwd: targetDir });\n\t\t} catch {\n\t\t\tawait this.runCommand(\"git\", [\"remote\", \"set-head\", \"origin\", \"-a\"], { cwd: targetDir }).catch(() => {});\n\t\t\tawait this.runCommand(\"git\", [\"reset\", \"--hard\", \"origin/HEAD\"], { cwd: targetDir });\n\t\t}\n\n\t\t// Clean untracked files (extensions should be pristine)\n\t\tawait this.runCommand(\"git\", [\"clean\", \"-fdx\"], { cwd: targetDir });\n\n\t\tconst packageJsonPath = join(targetDir, \"package.json\");\n\t\tif (existsSync(packageJsonPath)) {\n\t\t\tawait this.runNpmCommand([\"install\"], { cwd: targetDir });\n\t\t}\n\t}\n\n\tprivate async refreshTemporaryGitSource(source: GitSource, sourceStr: string): Promise<void> {\n\t\tif (isOfflineModeEnabled()) {\n\t\t\treturn;\n\t\t}\n\t\ttry {\n\t\t\tawait this.withProgress(\"pull\", sourceStr, `Refreshing ${sourceStr}...`, async () => {\n\t\t\t\tawait this.updateGit(source, \"temporary\");\n\t\t\t});\n\t\t} catch {\n\t\t\t// Keep cached temporary checkout if refresh fails.\n\t\t}\n\t}\n\n\tprivate async removeGit(source: GitSource, scope: SourceScope): Promise<void> {\n\t\tconst targetDir = this.getGitInstallPath(source, scope);\n\t\tif (!existsSync(targetDir)) return;\n\t\trmSync(targetDir, { recursive: true, force: true });\n\t\tthis.pruneEmptyGitParents(targetDir, this.getGitInstallRoot(scope));\n\t}\n\n\tprivate pruneEmptyGitParents(targetDir: string, installRoot: string | undefined): void {\n\t\tif (!installRoot) return;\n\t\tconst resolvedRoot = resolve(installRoot);\n\t\tlet current = dirname(targetDir);\n\t\twhile (current.startsWith(resolvedRoot) && current !== resolvedRoot) {\n\t\t\tif (!existsSync(current)) {\n\t\t\t\tcurrent = dirname(current);\n\t\t\t\tcontinue;\n\t\t\t}\n\t\t\tconst entries = readdirSync(current);\n\t\t\tif (entries.length > 0) {\n\t\t\t\tbreak;\n\t\t\t}\n\t\t\ttry {\n\t\t\t\trmSync(current, { recursive: true, force: true });\n\t\t\t} catch {\n\t\t\t\tbreak;\n\t\t\t}\n\t\t\tcurrent = dirname(current);\n\t\t}\n\t}\n\n\tprivate ensureNpmProject(installRoot: string): void {\n\t\tif (!existsSync(installRoot)) {\n\t\t\tmkdirSync(installRoot, { recursive: true });\n\t\t}\n\t\tthis.ensureGitIgnore(installRoot);\n\t\tconst packageJsonPath = join(installRoot, \"package.json\");\n\t\tif (!existsSync(packageJsonPath)) {\n\t\t\tconst pkgJson = { name: \"pi-extensions\", private: true };\n\t\t\twriteFileSync(packageJsonPath, JSON.stringify(pkgJson, null, 2), \"utf-8\");\n\t\t}\n\t}\n\n\tprivate ensureGitIgnore(dir: string): void {\n\t\tif (!existsSync(dir)) {\n\t\t\tmkdirSync(dir, { recursive: true });\n\t\t}\n\t\tconst ignorePath = join(dir, \".gitignore\");\n\t\tif (!existsSync(ignorePath)) {\n\t\t\twriteFileSync(ignorePath, \"*\\n!.gitignore\\n\", \"utf-8\");\n\t\t}\n\t}\n\n\tprivate getNpmInstallRoot(scope: SourceScope, temporary: boolean): string {\n\t\tif (temporary) {\n\t\t\treturn this.getTemporaryDir(\"npm\");\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME, \"npm\");\n\t\t}\n\t\treturn join(this.getGlobalNpmRoot(), \"..\");\n\t}\n\n\tprivate getGlobalNpmRoot(): string {\n\t\tconst npmCommand = this.getNpmCommand();\n\t\tconst commandKey = [npmCommand.command, ...npmCommand.args].join(\"\\0\");\n\t\tif (this.globalNpmRoot && this.globalNpmRootCommandKey === commandKey) {\n\t\t\treturn this.globalNpmRoot;\n\t\t}\n\t\tconst result = this.runNpmCommandSync([\"root\", \"-g\"]);\n\t\tthis.globalNpmRoot = result.trim();\n\t\tthis.globalNpmRootCommandKey = commandKey;\n\t\treturn this.globalNpmRoot;\n\t}\n\n\tprivate getNpmInstallPath(source: NpmSource, scope: SourceScope): string {\n\t\tif (scope === \"temporary\") {\n\t\t\treturn join(this.getTemporaryDir(\"npm\"), \"node_modules\", source.name);\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME, \"npm\", \"node_modules\", source.name);\n\t\t}\n\t\treturn join(this.getGlobalNpmRoot(), source.name);\n\t}\n\n\tprivate getGitInstallPath(source: GitSource, scope: SourceScope): string {\n\t\tif (scope === \"temporary\") {\n\t\t\treturn this.getTemporaryDir(`git-${source.host}`, source.path);\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME, \"git\", source.host, source.path);\n\t\t}\n\t\treturn join(this.agentDir, \"git\", source.host, source.path);\n\t}\n\n\tprivate getGitInstallRoot(scope: SourceScope): string | undefined {\n\t\tif (scope === \"temporary\") {\n\t\t\treturn undefined;\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME, \"git\");\n\t\t}\n\t\treturn join(this.agentDir, \"git\");\n\t}\n\n\tprivate getTemporaryDir(prefix: string, suffix?: string): string {\n\t\tconst hash = createHash(\"sha256\")\n\t\t\t.update(`${prefix}-${suffix ?? \"\"}`)\n\t\t\t.digest(\"hex\")\n\t\t\t.slice(0, 8);\n\t\treturn join(tmpdir(), \"pi-extensions\", prefix, hash, suffix ?? \"\");\n\t}\n\n\tprivate getBaseDirForScope(scope: SourceScope): string {\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME);\n\t\t}\n\t\tif (scope === \"user\") {\n\t\t\treturn this.agentDir;\n\t\t}\n\t\treturn this.cwd;\n\t}\n\n\tprivate resolvePath(input: string): string {\n\t\tconst trimmed = input.trim();\n\t\tif (trimmed === \"~\") return getHomeDir();\n\t\tif (trimmed.startsWith(\"~/\")) return join(getHomeDir(), trimmed.slice(2));\n\t\tif (trimmed.startsWith(\"~\")) return join(getHomeDir(), trimmed.slice(1));\n\t\treturn resolve(this.cwd, trimmed);\n\t}\n\n\tprivate resolvePathFromBase(input: string, baseDir: string): string {\n\t\tconst trimmed = input.trim();\n\t\tif (trimmed === \"~\") return getHomeDir();\n\t\tif (trimmed.startsWith(\"~/\")) return join(getHomeDir(), trimmed.slice(2));\n\t\tif (trimmed.startsWith(\"~\")) return join(getHomeDir(), trimmed.slice(1));\n\t\treturn resolve(baseDir, trimmed);\n\t}\n\n\tprivate collectPackageResources(\n\t\tpackageRoot: string,\n\t\taccumulator: ResourceAccumulator,\n\t\tfilter: PackageFilter | undefined,\n\t\tmetadata: PathMetadata,\n\t): boolean {\n\t\tif (filter) {\n\t\t\tfor (const resourceType of RESOURCE_TYPES) {\n\t\t\t\tconst patterns = filter[resourceType as keyof PackageFilter];\n\t\t\t\tconst target = this.getTargetMap(accumulator, resourceType);\n\t\t\t\tif (patterns !== undefined) {\n\t\t\t\t\tthis.applyPackageFilter(packageRoot, patterns, resourceType, target, metadata);\n\t\t\t\t} else {\n\t\t\t\t\tthis.collectDefaultResources(packageRoot, resourceType, target, metadata);\n\t\t\t\t}\n\t\t\t}\n\t\t\treturn true;\n\t\t}\n\n\t\tconst manifest = this.readPiManifest(packageRoot);\n\t\tif (manifest) {\n\t\t\tfor (const resourceType of RESOURCE_TYPES) {\n\t\t\t\tconst entries = manifest[resourceType as keyof PiManifest];\n\t\t\t\tthis.addManifestEntries(\n\t\t\t\t\tentries,\n\t\t\t\t\tpackageRoot,\n\t\t\t\t\tresourceType,\n\t\t\t\t\tthis.getTargetMap(accumulator, resourceType),\n\t\t\t\t\tmetadata,\n\t\t\t\t);\n\t\t\t}\n\t\t\treturn true;\n\t\t}\n\n\t\tlet hasAnyDir = false;\n\t\tfor (const resourceType of RESOURCE_TYPES) {\n\t\t\tconst dir = join(packageRoot, resourceType);\n\t\t\tif (existsSync(dir)) {\n\t\t\t\t// Collect all files from the directory (all enabled by default)\n\t\t\t\tconst files = collectResourceFiles(dir, resourceType);\n\t\t\t\tfor (const f of files) {\n\t\t\t\t\tthis.addResource(this.getTargetMap(accumulator, resourceType), f, metadata, true);\n\t\t\t\t}\n\t\t\t\thasAnyDir = true;\n\t\t\t}\n\t\t}\n\t\treturn hasAnyDir;\n\t}\n\n\tprivate collectDefaultResources(\n\t\tpackageRoot: string,\n\t\tresourceType: ResourceType,\n\t\ttarget: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tmetadata: PathMetadata,\n\t): void {\n\t\tconst manifest = this.readPiManifest(packageRoot);\n\t\tconst entries = manifest?.[resourceType as keyof PiManifest];\n\t\tif (entries) {\n\t\t\tthis.addManifestEntries(entries, packageRoot, resourceType, target, metadata);\n\t\t\treturn;\n\t\t}\n\t\tconst dir = join(packageRoot, resourceType);\n\t\tif (existsSync(dir)) {\n\t\t\t// Collect all files from the directory (all enabled by default)\n\t\t\tconst files = collectResourceFiles(dir, resourceType);\n\t\t\tfor (const f of files) {\n\t\t\t\tthis.addResource(target, f, metadata, true);\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate applyPackageFilter(\n\t\tpackageRoot: string,\n\t\tuserPatterns: string[],\n\t\tresourceType: ResourceType,\n\t\ttarget: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tmetadata: PathMetadata,\n\t): void {\n\t\tconst { allFiles } = this.collectManifestFiles(packageRoot, resourceType);\n\n\t\tif (userPatterns.length === 0) {\n\t\t\t// Empty array explicitly disables all resources of this type\n\t\t\tfor (const f of allFiles) {\n\t\t\t\tthis.addResource(target, f, metadata, false);\n\t\t\t}\n\t\t\treturn;\n\t\t}\n\n\t\t// Apply user patterns\n\t\tconst enabledByUser = applyPatterns(allFiles, userPatterns, packageRoot);\n\n\t\tfor (const f of allFiles) {\n\t\t\tconst enabled = enabledByUser.has(f);\n\t\t\tthis.addResource(target, f, metadata, enabled);\n\t\t}\n\t}\n\n\t/**\n\t * Collect all files from a package for a resource type, applying manifest patterns.\n\t * Returns { allFiles, enabledByManifest } where enabledByManifest is the set of files\n\t * that pass the manifest's own patterns.\n\t */\n\tprivate collectManifestFiles(\n\t\tpackageRoot: string,\n\t\tresourceType: ResourceType,\n\t): { allFiles: string[]; enabledByManifest: Set<string> } {\n\t\tconst manifest = this.readPiManifest(packageRoot);\n\t\tconst entries = manifest?.[resourceType as keyof PiManifest];\n\t\tif (entries && entries.length > 0) {\n\t\t\tconst allFiles = this.collectFilesFromManifestEntries(entries, packageRoot, resourceType);\n\t\t\tconst manifestPatterns = entries.filter(isPattern);\n\t\t\tconst enabledByManifest =\n\t\t\t\tmanifestPatterns.length > 0 ? applyPatterns(allFiles, manifestPatterns, packageRoot) : new Set(allFiles);\n\t\t\treturn { allFiles: Array.from(enabledByManifest), enabledByManifest };\n\t\t}\n\n\t\tconst conventionDir = join(packageRoot, resourceType);\n\t\tif (!existsSync(conventionDir)) {\n\t\t\treturn { allFiles: [], enabledByManifest: new Set() };\n\t\t}\n\t\tconst allFiles = collectResourceFiles(conventionDir, resourceType);\n\t\treturn { allFiles, enabledByManifest: new Set(allFiles) };\n\t}\n\n\tprivate readPiManifest(packageRoot: string): PiManifest | null {\n\t\tconst packageJsonPath = join(packageRoot, \"package.json\");\n\t\tif (!existsSync(packageJsonPath)) {\n\t\t\treturn null;\n\t\t}\n\n\t\ttry {\n\t\t\tconst content = readFileSync(packageJsonPath, \"utf-8\");\n\t\t\tconst pkg = JSON.parse(content) as { pi?: PiManifest };\n\t\t\treturn pkg.pi ?? null;\n\t\t} catch {\n\t\t\treturn null;\n\t\t}\n\t}\n\n\tprivate addManifestEntries(\n\t\tentries: string[] | undefined,\n\t\troot: string,\n\t\tresourceType: ResourceType,\n\t\ttarget: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tmetadata: PathMetadata,\n\t): void {\n\t\tif (!entries) return;\n\n\t\tconst allFiles = this.collectFilesFromManifestEntries(entries, root, resourceType);\n\t\tconst patterns = entries.filter(isPattern);\n\t\tconst enabledPaths = applyPatterns(allFiles, patterns, root);\n\n\t\tfor (const f of allFiles) {\n\t\t\tif (enabledPaths.has(f)) {\n\t\t\t\tthis.addResource(target, f, metadata, true);\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate collectFilesFromManifestEntries(entries: string[], root: string, resourceType: ResourceType): string[] {\n\t\tconst plain = entries.filter((entry) => !isPattern(entry));\n\t\tconst resolved = plain.map((entry) => resolve(root, entry));\n\t\treturn this.collectFilesFromPaths(resolved, resourceType);\n\t}\n\n\tprivate resolveLocalEntries(\n\t\tentries: string[],\n\t\tresourceType: ResourceType,\n\t\ttarget: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tmetadata: PathMetadata,\n\t\tbaseDir: string,\n\t): void {\n\t\tif (entries.length === 0) return;\n\n\t\t// Collect all files from plain entries (non-pattern entries)\n\t\tconst { plain, patterns } = splitPatterns(entries);\n\t\tconst resolvedPlain = plain.map((p) => this.resolvePathFromBase(p, baseDir));\n\t\tconst allFiles = this.collectFilesFromPaths(resolvedPlain, resourceType);\n\n\t\t// Determine which files are enabled based on patterns\n\t\tconst enabledPaths = applyPatterns(allFiles, patterns, baseDir);\n\n\t\t// Add all files with their enabled state\n\t\tfor (const f of allFiles) {\n\t\t\tthis.addResource(target, f, metadata, enabledPaths.has(f));\n\t\t}\n\t}\n\n\tprivate addAutoDiscoveredResources(\n\t\taccumulator: ResourceAccumulator,\n\t\tglobalSettings: ReturnType<SettingsManager[\"getGlobalSettings\"]>,\n\t\tprojectSettings: ReturnType<SettingsManager[\"getProjectSettings\"]>,\n\t\tglobalBaseDir: string,\n\t\tprojectBaseDir: string,\n\t): void {\n\t\tconst userMetadata: PathMetadata = {\n\t\t\tsource: \"auto\",\n\t\t\tscope: \"user\",\n\t\t\torigin: \"top-level\",\n\t\t\tbaseDir: globalBaseDir,\n\t\t};\n\t\tconst projectMetadata: PathMetadata = {\n\t\t\tsource: \"auto\",\n\t\t\tscope: \"project\",\n\t\t\torigin: \"top-level\",\n\t\t\tbaseDir: projectBaseDir,\n\t\t};\n\n\t\tconst userOverrides = {\n\t\t\textensions: (globalSettings.extensions ?? []) as string[],\n\t\t\tskills: (globalSettings.skills ?? []) as string[],\n\t\t\tprompts: (globalSettings.prompts ?? []) as string[],\n\t\t\tthemes: (globalSettings.themes ?? []) as string[],\n\t\t};\n\t\tconst projectOverrides = {\n\t\t\textensions: (projectSettings.extensions ?? []) as string[],\n\t\t\tskills: (projectSettings.skills ?? []) as string[],\n\t\t\tprompts: (projectSettings.prompts ?? []) as string[],\n\t\t\tthemes: (projectSettings.themes ?? []) as string[],\n\t\t};\n\n\t\tconst userDirs = {\n\t\t\textensions: join(globalBaseDir, \"extensions\"),\n\t\t\tskills: join(globalBaseDir, \"skills\"),\n\t\t\tprompts: join(globalBaseDir, \"prompts\"),\n\t\t\tthemes: join(globalBaseDir, \"themes\"),\n\t\t};\n\t\tconst projectDirs = {\n\t\t\textensions: join(projectBaseDir, \"extensions\"),\n\t\t\tskills: join(projectBaseDir, \"skills\"),\n\t\t\tprompts: join(projectBaseDir, \"prompts\"),\n\t\t\tthemes: join(projectBaseDir, \"themes\"),\n\t\t};\n\t\tconst userAgentsSkillsDir = join(getHomeDir(), \".agents\", \"skills\");\n\t\tconst projectAgentsSkillDirs = collectAncestorAgentsSkillDirs(this.cwd).filter(\n\t\t\t(dir) => resolve(dir) !== resolve(userAgentsSkillsDir),\n\t\t);\n\n\t\tconst addResources = (\n\t\t\tresourceType: ResourceType,\n\t\t\tpaths: string[],\n\t\t\tmetadata: PathMetadata,\n\t\t\toverrides: string[],\n\t\t\tbaseDir: string,\n\t\t) => {\n\t\t\tconst target = this.getTargetMap(accumulator, resourceType);\n\t\t\tfor (const path of paths) {\n\t\t\t\tconst enabled = isEnabledByOverrides(path, overrides, baseDir);\n\t\t\t\tthis.addResource(target, path, metadata, enabled);\n\t\t\t}\n\t\t};\n\n\t\taddResources(\n\t\t\t\"extensions\",\n\t\t\tcollectAutoExtensionEntries(projectDirs.extensions),\n\t\t\tprojectMetadata,\n\t\t\tprojectOverrides.extensions,\n\t\t\tprojectBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"skills\",\n\t\t\t[\n\t\t\t\t...collectAutoSkillEntries(projectDirs.skills),\n\t\t\t\t...projectAgentsSkillDirs.flatMap((dir) => collectAutoSkillEntries(dir)),\n\t\t\t],\n\t\t\tprojectMetadata,\n\t\t\tprojectOverrides.skills,\n\t\t\tprojectBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"prompts\",\n\t\t\tcollectAutoPromptEntries(projectDirs.prompts),\n\t\t\tprojectMetadata,\n\t\t\tprojectOverrides.prompts,\n\t\t\tprojectBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"themes\",\n\t\t\tcollectAutoThemeEntries(projectDirs.themes),\n\t\t\tprojectMetadata,\n\t\t\tprojectOverrides.themes,\n\t\t\tprojectBaseDir,\n\t\t);\n\n\t\taddResources(\n\t\t\t\"extensions\",\n\t\t\tcollectAutoExtensionEntries(userDirs.extensions),\n\t\t\tuserMetadata,\n\t\t\tuserOverrides.extensions,\n\t\t\tglobalBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"skills\",\n\t\t\t[...collectAutoSkillEntries(userDirs.skills), ...collectAutoSkillEntries(userAgentsSkillsDir)],\n\t\t\tuserMetadata,\n\t\t\tuserOverrides.skills,\n\t\t\tglobalBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"prompts\",\n\t\t\tcollectAutoPromptEntries(userDirs.prompts),\n\t\t\tuserMetadata,\n\t\t\tuserOverrides.prompts,\n\t\t\tglobalBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"themes\",\n\t\t\tcollectAutoThemeEntries(userDirs.themes),\n\t\t\tuserMetadata,\n\t\t\tuserOverrides.themes,\n\t\t\tglobalBaseDir,\n\t\t);\n\t}\n\n\tprivate collectFilesFromPaths(paths: string[], resourceType: ResourceType): string[] {\n\t\tconst files: string[] = [];\n\t\tfor (const p of paths) {\n\t\t\tif (!existsSync(p)) continue;\n\n\t\t\ttry {\n\t\t\t\tconst stats = statSync(p);\n\t\t\t\tif (stats.isFile()) {\n\t\t\t\t\tfiles.push(p);\n\t\t\t\t} else if (stats.isDirectory()) {\n\t\t\t\t\tfiles.push(...collectResourceFiles(p, resourceType));\n\t\t\t\t}\n\t\t\t} catch {\n\t\t\t\t// Ignore errors\n\t\t\t}\n\t\t}\n\t\treturn files;\n\t}\n\n\tprivate getTargetMap(\n\t\taccumulator: ResourceAccumulator,\n\t\tresourceType: ResourceType,\n\t): Map<string, { metadata: PathMetadata; enabled: boolean }> {\n\t\tswitch (resourceType) {\n\t\t\tcase \"extensions\":\n\t\t\t\treturn accumulator.extensions;\n\t\t\tcase \"skills\":\n\t\t\t\treturn accumulator.skills;\n\t\t\tcase \"prompts\":\n\t\t\t\treturn accumulator.prompts;\n\t\t\tcase \"themes\":\n\t\t\t\treturn accumulator.themes;\n\t\t\tdefault:\n\t\t\t\tthrow new Error(`Unknown resource type: ${resourceType}`);\n\t\t}\n\t}\n\n\tprivate addResource(\n\t\tmap: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tpath: string,\n\t\tmetadata: PathMetadata,\n\t\tenabled: boolean,\n\t): void {\n\t\tif (!path) return;\n\t\tif (!map.has(path)) {\n\t\t\tmap.set(path, { metadata, enabled });\n\t\t}\n\t}\n\n\tprivate createAccumulator(): ResourceAccumulator {\n\t\treturn {\n\t\t\textensions: new Map(),\n\t\t\tskills: new Map(),\n\t\t\tprompts: new Map(),\n\t\t\tthemes: new Map(),\n\t\t};\n\t}\n\n\tprivate toResolvedPaths(accumulator: ResourceAccumulator): ResolvedPaths {\n\t\tconst toResolved = (entries: Map<string, { metadata: PathMetadata; enabled: boolean }>): ResolvedResource[] => {\n\t\t\treturn Array.from(entries.entries()).map(([path, { metadata, enabled }]) => ({\n\t\t\t\tpath,\n\t\t\t\tenabled,\n\t\t\t\tmetadata,\n\t\t\t}));\n\t\t};\n\n\t\treturn {\n\t\t\textensions: toResolved(accumulator.extensions),\n\t\t\tskills: toResolved(accumulator.skills),\n\t\t\tprompts: toResolved(accumulator.prompts),\n\t\t\tthemes: toResolved(accumulator.themes),\n\t\t};\n\t}\n\n\tprivate runCommand(command: string, args: string[], options?: { cwd?: string }): Promise<void> {\n\t\treturn new Promise((resolvePromise, reject) => {\n\t\t\tconst child = spawn(command, args, {\n\t\t\t\tcwd: options?.cwd,\n\t\t\t\tstdio: \"inherit\",\n\t\t\t\tshell: process.platform === \"win32\",\n\t\t\t});\n\t\t\tchild.on(\"error\", reject);\n\t\t\tchild.on(\"exit\", (code) => {\n\t\t\t\tif (code === 0) {\n\t\t\t\t\tresolvePromise();\n\t\t\t\t} else {\n\t\t\t\t\treject(new Error(`${command} ${args.join(\" \")} failed with code ${code}`));\n\t\t\t\t}\n\t\t\t});\n\t\t});\n\t}\n\n\tprivate runCommandSync(command: string, args: string[]): string {\n\t\tconst result = spawnSync(command, args, {\n\t\t\tstdio: [\"ignore\", \"pipe\", \"pipe\"],\n\t\t\tencoding: \"utf-8\",\n\t\t\tshell: process.platform === \"win32\",\n\t\t});\n\t\tif (result.status !== 0) {\n\t\t\tthrow new Error(`Failed to run ${command} ${args.join(\" \")}: ${result.stderr || result.stdout}`);\n\t\t}\n\t\treturn (result.stdout || result.stderr || \"\").trim();\n\t}\n}\n"]}
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local?: boolean }): Promise<void>;\n\tremove(source: string, options?: { local?: boolean }): Promise<void>;\n\tupdate(source?: string): Promise<void>;\n\tresolveExtensionSources(\n\t\tsources: string[],\n\t\toptions?: { local?: boolean; temporary?: boolean },\n\t): Promise<ResolvedPaths>;\n\taddSourceToSettings(source: string, options?: { local?: boolean }): boolean;\n\tremoveSourceFromSettings(source: string, options?: { local?: boolean }): boolean;\n\tsetProgressCallback(callback: ProgressCallback | undefined): void;\n\tgetInstalledPath(source: string, scope: \"user\" | \"project\"): string | undefined;\n}\n\ninterface PackageManagerOptions {\n\tcwd: string;\n\tagentDir: string;\n\tsettingsManager: SettingsManager;\n}\n\ntype SourceScope = \"user\" | \"project\" | \"temporary\";\n\ntype NpmSource = {\n\ttype: \"npm\";\n\tspec: string;\n\tname: string;\n\tpinned: boolean;\n};\n\ntype LocalSource = {\n\ttype: \"local\";\n\tpath: string;\n};\n\ntype ParsedSource = NpmSource | GitSource | LocalSource;\n\ninterface PiManifest {\n\textensions?: string[];\n\tskills?: string[];\n\tprompts?: string[];\n\tthemes?: string[];\n}\n\ninterface ResourceAccumulator {\n\textensions: Map<string, { metadata: PathMetadata; enabled: boolean }>;\n\tskills: Map<string, { metadata: PathMetadata; enabled: boolean }>;\n\tprompts: Map<string, { metadata: PathMetadata; enabled: boolean }>;\n\tthemes: Map<string, { metadata: PathMetadata; enabled: boolean }>;\n}\n\ninterface PackageFilter {\n\textensions?: string[];\n\tskills?: string[];\n\tprompts?: string[];\n\tthemes?: string[];\n}\n\ntype ResourceType = \"extensions\" | \"skills\" | \"prompts\" | \"themes\";\n\nconst RESOURCE_TYPES: ResourceType[] = [\"extensions\", \"skills\", \"prompts\", \"themes\"];\n\nconst FILE_PATTERNS: Record<ResourceType, RegExp> = {\n\textensions: /\\.(ts|js)$/,\n\tskills: /\\.md$/,\n\tprompts: /\\.md$/,\n\tthemes: /\\.json$/,\n};\n\nconst IGNORE_FILE_NAMES = [\".gitignore\", \".ignore\", \".fdignore\"];\n\ntype IgnoreMatcher = ReturnType<typeof ignore>;\n\nfunction toPosixPath(p: string): string {\n\treturn p.split(sep).join(\"/\");\n}\n\nfunction getHomeDir(): string {\n\treturn process.env.HOME || homedir();\n}\n\nfunction prefixIgnorePattern(line: string, prefix: string): string | null {\n\tconst trimmed = line.trim();\n\tif (!trimmed) return null;\n\tif (trimmed.startsWith(\"#\") && !trimmed.startsWith(\"\\\\#\")) return null;\n\n\tlet pattern = line;\n\tlet negated = false;\n\n\tif (pattern.startsWith(\"!\")) {\n\t\tnegated = true;\n\t\tpattern = pattern.slice(1);\n\t} else if (pattern.startsWith(\"\\\\!\")) {\n\t\tpattern = pattern.slice(1);\n\t}\n\n\tif (pattern.startsWith(\"/\")) {\n\t\tpattern = pattern.slice(1);\n\t}\n\n\tconst prefixed = prefix ? `${prefix}${pattern}` : pattern;\n\treturn negated ? `!${prefixed}` : prefixed;\n}\n\nfunction addIgnoreRules(ig: IgnoreMatcher, dir: string, rootDir: string): void {\n\tconst relativeDir = relative(rootDir, dir);\n\tconst prefix = 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{\n\t\t\tplain.push(entry);\n\t\t}\n\t}\n\treturn { plain, patterns };\n}\n\nfunction collectFiles(\n\tdir: string,\n\tfilePattern: RegExp,\n\tskipNodeModules = true,\n\tignoreMatcher?: IgnoreMatcher,\n\trootDir?: string,\n): string[] {\n\tconst files: string[] = [];\n\tif (!existsSync(dir)) return files;\n\n\tconst root = rootDir ?? dir;\n\tconst ig = ignoreMatcher ?? ignore();\n\taddIgnoreRules(ig, dir, root);\n\n\ttry {\n\t\tconst entries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of entries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (skipNodeModules && entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isDir = entry.isDirectory();\n\t\t\tlet isFile = entry.isFile();\n\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tconst stats = statSync(fullPath);\n\t\t\t\t\tisDir = stats.isDirectory();\n\t\t\t\t\tisFile = stats.isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(root, fullPath));\n\t\t\tconst ignorePath = isDir ? `${relPath}/` : relPath;\n\t\t\tif (ig.ignores(ignorePath)) continue;\n\n\t\t\tif (isDir) {\n\t\t\t\tfiles.push(...collectFiles(fullPath, filePattern, skipNodeModules, ig, root));\n\t\t\t} else if (isFile && filePattern.test(entry.name)) {\n\t\t\t\tfiles.push(fullPath);\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn files;\n}\n\nfunction collectSkillEntries(\n\tdir: string,\n\tincludeRootFiles = true,\n\tignoreMatcher?: IgnoreMatcher,\n\trootDir?: string,\n): string[] {\n\tconst entries: string[] = [];\n\tif (!existsSync(dir)) return entries;\n\n\tconst root = rootDir ?? dir;\n\tconst ig = ignoreMatcher ?? ignore();\n\taddIgnoreRules(ig, dir, root);\n\n\ttry {\n\t\tconst dirEntries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of dirEntries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isDir = entry.isDirectory();\n\t\t\tlet isFile = entry.isFile();\n\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tconst stats = statSync(fullPath);\n\t\t\t\t\tisDir = stats.isDirectory();\n\t\t\t\t\tisFile = stats.isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(root, fullPath));\n\t\t\tconst ignorePath = isDir ? `${relPath}/` : relPath;\n\t\t\tif (ig.ignores(ignorePath)) continue;\n\n\t\t\tif (isDir) {\n\t\t\t\tentries.push(...collectSkillEntries(fullPath, false, ig, root));\n\t\t\t} else if (isFile) {\n\t\t\t\tconst isRootMd = includeRootFiles && entry.name.endsWith(\".md\");\n\t\t\t\tconst isSkillMd = !includeRootFiles && entry.name === \"SKILL.md\";\n\t\t\t\tif (isRootMd || isSkillMd) {\n\t\t\t\t\tentries.push(fullPath);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn entries;\n}\n\nfunction collectAutoSkillEntries(dir: string, includeRootFiles = true): string[] {\n\treturn collectSkillEntries(dir, includeRootFiles);\n}\n\nfunction findGitRepoRoot(startDir: string): string | null {\n\tlet dir = resolve(startDir);\n\twhile (true) {\n\t\tif (existsSync(join(dir, \".git\"))) {\n\t\t\treturn dir;\n\t\t}\n\t\tconst parent = dirname(dir);\n\t\tif (parent === dir) {\n\t\t\treturn null;\n\t\t}\n\t\tdir = parent;\n\t}\n}\n\nfunction collectAncestorAgentsSkillDirs(startDir: string): string[] {\n\tconst skillDirs: string[] = [];\n\tconst resolvedStartDir = resolve(startDir);\n\tconst gitRepoRoot = findGitRepoRoot(resolvedStartDir);\n\n\tlet dir = resolvedStartDir;\n\twhile (true) {\n\t\tskillDirs.push(join(dir, \".agents\", \"skills\"));\n\t\tif (gitRepoRoot && dir === gitRepoRoot) {\n\t\t\tbreak;\n\t\t}\n\t\tconst parent = dirname(dir);\n\t\tif (parent === dir) {\n\t\t\tbreak;\n\t\t}\n\t\tdir = parent;\n\t}\n\n\treturn skillDirs;\n}\n\nfunction collectAutoPromptEntries(dir: string): string[] {\n\tconst entries: string[] = [];\n\tif (!existsSync(dir)) return entries;\n\n\tconst ig = ignore();\n\taddIgnoreRules(ig, dir, dir);\n\n\ttry {\n\t\tconst dirEntries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of dirEntries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isFile = entry.isFile();\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tisFile = statSync(fullPath).isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(dir, fullPath));\n\t\t\tif (ig.ignores(relPath)) continue;\n\n\t\t\tif (isFile && entry.name.endsWith(\".md\")) {\n\t\t\t\tentries.push(fullPath);\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn entries;\n}\n\nfunction collectAutoThemeEntries(dir: string): string[] {\n\tconst entries: string[] = [];\n\tif (!existsSync(dir)) return entries;\n\n\tconst ig = ignore();\n\taddIgnoreRules(ig, dir, dir);\n\n\ttry {\n\t\tconst dirEntries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of dirEntries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isFile = entry.isFile();\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tisFile = statSync(fullPath).isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(dir, fullPath));\n\t\t\tif (ig.ignores(relPath)) continue;\n\n\t\t\tif (isFile && entry.name.endsWith(\".json\")) {\n\t\t\t\tentries.push(fullPath);\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn entries;\n}\n\nfunction readPiManifestFile(packageJsonPath: string): PiManifest | null {\n\ttry {\n\t\tconst content = readFileSync(packageJsonPath, \"utf-8\");\n\t\tconst pkg = JSON.parse(content) as { pi?: PiManifest };\n\t\treturn pkg.pi ?? null;\n\t} catch {\n\t\treturn null;\n\t}\n}\n\nfunction resolveExtensionEntries(dir: string): string[] | null {\n\tconst packageJsonPath = join(dir, \"package.json\");\n\tif (existsSync(packageJsonPath)) {\n\t\tconst manifest = readPiManifestFile(packageJsonPath);\n\t\tif (manifest?.extensions?.length) {\n\t\t\tconst entries: string[] = [];\n\t\t\tfor (const extPath of manifest.extensions) {\n\t\t\t\tconst resolvedExtPath = resolve(dir, extPath);\n\t\t\t\tif (existsSync(resolvedExtPath)) {\n\t\t\t\t\tentries.push(resolvedExtPath);\n\t\t\t\t}\n\t\t\t}\n\t\t\tif (entries.length > 0) {\n\t\t\t\treturn entries;\n\t\t\t}\n\t\t}\n\t}\n\n\tconst indexTs = join(dir, \"index.ts\");\n\tconst indexJs = join(dir, \"index.js\");\n\tif (existsSync(indexTs)) {\n\t\treturn [indexTs];\n\t}\n\tif (existsSync(indexJs)) {\n\t\treturn [indexJs];\n\t}\n\n\treturn null;\n}\n\nfunction collectAutoExtensionEntries(dir: string): string[] {\n\tconst entries: string[] = [];\n\tif (!existsSync(dir)) return entries;\n\n\t// First check if this directory itself has explicit extension entries (package.json or index)\n\tconst rootEntries = resolveExtensionEntries(dir);\n\tif (rootEntries) {\n\t\treturn rootEntries;\n\t}\n\n\t// Otherwise, discover extensions from directory contents\n\tconst ig = ignore();\n\taddIgnoreRules(ig, dir, dir);\n\n\ttry {\n\t\tconst dirEntries = readdirSync(dir, { withFileTypes: true });\n\t\tfor (const entry of dirEntries) {\n\t\t\tif (entry.name.startsWith(\".\")) continue;\n\t\t\tif (entry.name === \"node_modules\") continue;\n\n\t\t\tconst fullPath = join(dir, entry.name);\n\t\t\tlet isDir = entry.isDirectory();\n\t\t\tlet isFile = entry.isFile();\n\n\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\ttry {\n\t\t\t\t\tconst stats = statSync(fullPath);\n\t\t\t\t\tisDir = stats.isDirectory();\n\t\t\t\t\tisFile = stats.isFile();\n\t\t\t\t} catch {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t}\n\n\t\t\tconst relPath = toPosixPath(relative(dir, fullPath));\n\t\t\tconst ignorePath = isDir ? `${relPath}/` : relPath;\n\t\t\tif (ig.ignores(ignorePath)) continue;\n\n\t\t\tif (isFile && (entry.name.endsWith(\".ts\") || entry.name.endsWith(\".js\"))) {\n\t\t\t\tentries.push(fullPath);\n\t\t\t} else if (isDir) {\n\t\t\t\tconst resolvedEntries = resolveExtensionEntries(fullPath);\n\t\t\t\tif (resolvedEntries) {\n\t\t\t\t\tentries.push(...resolvedEntries);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t} catch {\n\t\t// Ignore errors\n\t}\n\n\treturn entries;\n}\n\n/**\n * Collect resource files from a directory based on resource type.\n * Extensions use smart discovery (index.ts in subdirs), others use recursive collection.\n */\nfunction collectResourceFiles(dir: string, resourceType: ResourceType): string[] {\n\tif (resourceType === \"skills\") {\n\t\treturn collectSkillEntries(dir);\n\t}\n\tif (resourceType === \"extensions\") {\n\t\treturn collectAutoExtensionEntries(dir);\n\t}\n\treturn collectFiles(dir, FILE_PATTERNS[resourceType]);\n}\n\nfunction matchesAnyPattern(filePath: string, patterns: string[], baseDir: string): boolean {\n\tconst rel = toPosixPath(relative(baseDir, filePath));\n\tconst name = basename(filePath);\n\tconst filePathPosix = toPosixPath(filePath);\n\tconst isSkillFile = name === \"SKILL.md\";\n\tconst parentDir = isSkillFile ? dirname(filePath) : undefined;\n\tconst parentRel = isSkillFile ? toPosixPath(relative(baseDir, parentDir!)) : undefined;\n\tconst parentName = isSkillFile ? basename(parentDir!) : undefined;\n\tconst parentDirPosix = isSkillFile ? toPosixPath(parentDir!) : undefined;\n\n\treturn patterns.some((pattern) => {\n\t\tconst normalizedPattern = toPosixPath(pattern);\n\t\tif (\n\t\t\tminimatch(rel, normalizedPattern) ||\n\t\t\tminimatch(name, normalizedPattern) ||\n\t\t\tminimatch(filePathPosix, normalizedPattern)\n\t\t) {\n\t\t\treturn true;\n\t\t}\n\t\tif (!isSkillFile) return false;\n\t\treturn (\n\t\t\tminimatch(parentRel!, normalizedPattern) ||\n\t\t\tminimatch(parentName!, normalizedPattern) ||\n\t\t\tminimatch(parentDirPosix!, normalizedPattern)\n\t\t);\n\t});\n}\n\nfunction normalizeExactPattern(pattern: string): string {\n\tconst normalized = pattern.startsWith(\"./\") || pattern.startsWith(\".\\\\\") ? pattern.slice(2) : pattern;\n\treturn toPosixPath(normalized);\n}\n\nfunction matchesAnyExactPattern(filePath: string, patterns: string[], baseDir: string): boolean {\n\tif (patterns.length === 0) return false;\n\tconst rel = toPosixPath(relative(baseDir, filePath));\n\tconst name = basename(filePath);\n\tconst filePathPosix = toPosixPath(filePath);\n\tconst isSkillFile = name === \"SKILL.md\";\n\tconst parentDir = isSkillFile ? dirname(filePath) : undefined;\n\tconst parentRel = isSkillFile ? toPosixPath(relative(baseDir, parentDir!)) : undefined;\n\tconst parentDirPosix = isSkillFile ? toPosixPath(parentDir!) : undefined;\n\n\treturn patterns.some((pattern) => {\n\t\tconst normalized = normalizeExactPattern(pattern);\n\t\tif (normalized === rel || normalized === filePathPosix) {\n\t\t\treturn true;\n\t\t}\n\t\tif (!isSkillFile) return false;\n\t\treturn normalized === parentRel || normalized === parentDirPosix;\n\t});\n}\n\nfunction getOverridePatterns(entries: string[]): string[] {\n\treturn entries.filter((pattern) => pattern.startsWith(\"!\") || pattern.startsWith(\"+\") || pattern.startsWith(\"-\"));\n}\n\nfunction isEnabledByOverrides(filePath: string, patterns: string[], baseDir: string): boolean {\n\tconst overrides = getOverridePatterns(patterns);\n\tconst excludes = overrides.filter((pattern) => pattern.startsWith(\"!\")).map((pattern) => pattern.slice(1));\n\tconst forceIncludes = overrides.filter((pattern) => pattern.startsWith(\"+\")).map((pattern) => pattern.slice(1));\n\tconst forceExcludes = overrides.filter((pattern) => pattern.startsWith(\"-\")).map((pattern) => pattern.slice(1));\n\n\tlet enabled = true;\n\tif (excludes.length > 0 && matchesAnyPattern(filePath, excludes, baseDir)) {\n\t\tenabled = false;\n\t}\n\tif (forceIncludes.length > 0 && matchesAnyExactPattern(filePath, forceIncludes, baseDir)) {\n\t\tenabled = true;\n\t}\n\tif (forceExcludes.length > 0 && matchesAnyExactPattern(filePath, forceExcludes, baseDir)) {\n\t\tenabled = false;\n\t}\n\treturn enabled;\n}\n\n/**\n * Apply patterns to paths and return a Set of enabled paths.\n * Pattern types:\n * - Plain patterns: include matching paths\n * - `!pattern`: exclude matching paths\n * - `+path`: force-include exact path (overrides exclusions)\n * - `-path`: force-exclude exact path (overrides force-includes)\n */\nfunction applyPatterns(allPaths: string[], patterns: string[], baseDir: string): Set<string> {\n\tconst includes: string[] = [];\n\tconst excludes: string[] = [];\n\tconst forceIncludes: string[] = [];\n\tconst forceExcludes: string[] = [];\n\n\tfor (const p of patterns) {\n\t\tif (p.startsWith(\"+\")) {\n\t\t\tforceIncludes.push(p.slice(1));\n\t\t} else if (p.startsWith(\"-\")) {\n\t\t\tforceExcludes.push(p.slice(1));\n\t\t} else if (p.startsWith(\"!\")) {\n\t\t\texcludes.push(p.slice(1));\n\t\t} else {\n\t\t\tincludes.push(p);\n\t\t}\n\t}\n\n\t// Step 1: Apply includes (or all if no includes)\n\tlet result: string[];\n\tif (includes.length === 0) {\n\t\tresult = [...allPaths];\n\t} else {\n\t\tresult = allPaths.filter((filePath) => matchesAnyPattern(filePath, includes, baseDir));\n\t}\n\n\t// Step 2: Apply excludes\n\tif (excludes.length > 0) {\n\t\tresult = result.filter((filePath) => !matchesAnyPattern(filePath, excludes, baseDir));\n\t}\n\n\t// Step 3: Force-include (add back from allPaths, overriding exclusions)\n\tif (forceIncludes.length > 0) {\n\t\tfor (const filePath of allPaths) {\n\t\t\tif (!result.includes(filePath) && matchesAnyExactPattern(filePath, forceIncludes, baseDir)) {\n\t\t\t\tresult.push(filePath);\n\t\t\t}\n\t\t}\n\t}\n\n\t// Step 4: Force-exclude (remove even if included or force-included)\n\tif (forceExcludes.length > 0) {\n\t\tresult = result.filter((filePath) => !matchesAnyExactPattern(filePath, forceExcludes, baseDir));\n\t}\n\n\treturn new Set(result);\n}\n\nexport class DefaultPackageManager implements PackageManager {\n\tprivate cwd: string;\n\tprivate agentDir: string;\n\tprivate settingsManager: SettingsManager;\n\tprivate globalNpmRoot: string | undefined;\n\tprivate globalNpmRootCommandKey: string | undefined;\n\tprivate progressCallback: ProgressCallback | undefined;\n\n\tconstructor(options: PackageManagerOptions) {\n\t\tthis.cwd = options.cwd;\n\t\tthis.agentDir = options.agentDir;\n\t\tthis.settingsManager = options.settingsManager;\n\t}\n\n\tsetProgressCallback(callback: ProgressCallback | undefined): void {\n\t\tthis.progressCallback = callback;\n\t}\n\n\taddSourceToSettings(source: string, options?: { local?: boolean }): boolean {\n\t\tconst scope: SourceScope = options?.local ? \"project\" : \"user\";\n\t\tconst currentSettings =\n\t\t\tscope === \"project\" ? this.settingsManager.getProjectSettings() : this.settingsManager.getGlobalSettings();\n\t\tconst currentPackages = currentSettings.packages ?? [];\n\t\tconst normalizedSource = this.normalizePackageSourceForSettings(source, scope);\n\t\tconst exists = currentPackages.some((existing) => this.packageSourcesMatch(existing, source, scope));\n\t\tif (exists) {\n\t\t\treturn false;\n\t\t}\n\t\tconst nextPackages = [...currentPackages, normalizedSource];\n\t\tif (scope === \"project\") {\n\t\t\tthis.settingsManager.setProjectPackages(nextPackages);\n\t\t} else {\n\t\t\tthis.settingsManager.setPackages(nextPackages);\n\t\t}\n\t\treturn true;\n\t}\n\n\tremoveSourceFromSettings(source: string, options?: { local?: boolean }): boolean {\n\t\tconst scope: SourceScope = options?.local ? \"project\" : \"user\";\n\t\tconst currentSettings =\n\t\t\tscope === \"project\" ? this.settingsManager.getProjectSettings() : this.settingsManager.getGlobalSettings();\n\t\tconst currentPackages = currentSettings.packages ?? [];\n\t\tconst nextPackages = currentPackages.filter((existing) => !this.packageSourcesMatch(existing, source, scope));\n\t\tconst changed = nextPackages.length !== currentPackages.length;\n\t\tif (!changed) {\n\t\t\treturn false;\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\tthis.settingsManager.setProjectPackages(nextPackages);\n\t\t} else {\n\t\t\tthis.settingsManager.setPackages(nextPackages);\n\t\t}\n\t\treturn true;\n\t}\n\n\tgetInstalledPath(source: string, scope: \"user\" | \"project\"): string | undefined {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\tconst path = this.getNpmInstallPath(parsed, scope);\n\t\t\treturn existsSync(path) ? path : undefined;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\tconst path = this.getGitInstallPath(parsed, scope);\n\t\t\treturn existsSync(path) ? path : undefined;\n\t\t}\n\t\tif (parsed.type === \"local\") {\n\t\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\t\tconst path = this.resolvePathFromBase(parsed.path, baseDir);\n\t\t\treturn existsSync(path) ? path : undefined;\n\t\t}\n\t\treturn undefined;\n\t}\n\n\tprivate emitProgress(event: ProgressEvent): void {\n\t\tthis.progressCallback?.(event);\n\t}\n\n\tprivate async withProgress(\n\t\taction: ProgressEvent[\"action\"],\n\t\tsource: string,\n\t\tmessage: string,\n\t\toperation: () => Promise<void>,\n\t): Promise<void> {\n\t\tthis.emitProgress({ type: \"start\", action, source, message });\n\t\ttry {\n\t\t\tawait operation();\n\t\t\tthis.emitProgress({ type: \"complete\", action, source });\n\t\t} catch (error) {\n\t\t\tconst errorMessage = error instanceof Error ? error.message : String(error);\n\t\t\tthis.emitProgress({ type: \"error\", action, source, message: errorMessage });\n\t\t\tthrow error;\n\t\t}\n\t}\n\n\tasync resolve(onMissing?: (source: string) => Promise<MissingSourceAction>): Promise<ResolvedPaths> {\n\t\tconst accumulator = this.createAccumulator();\n\t\tconst globalSettings = this.settingsManager.getGlobalSettings();\n\t\tconst projectSettings = this.settingsManager.getProjectSettings();\n\n\t\t// Collect all packages with scope (project first so cwd resources win collisions)\n\t\tconst allPackages: Array<{ pkg: PackageSource; scope: SourceScope }> = [];\n\t\tfor (const pkg of projectSettings.packages ?? []) {\n\t\t\tallPackages.push({ pkg, scope: \"project\" });\n\t\t}\n\t\tfor (const pkg of globalSettings.packages ?? []) {\n\t\t\tallPackages.push({ pkg, scope: \"user\" });\n\t\t}\n\n\t\t// Dedupe: project scope wins over global for same package identity\n\t\tconst packageSources = this.dedupePackages(allPackages);\n\t\tawait this.resolvePackageSources(packageSources, accumulator, onMissing);\n\n\t\tconst globalBaseDir = this.agentDir;\n\t\tconst projectBaseDir = join(this.cwd, CONFIG_DIR_NAME);\n\n\t\tfor (const resourceType of RESOURCE_TYPES) {\n\t\t\tconst target = this.getTargetMap(accumulator, resourceType);\n\t\t\tconst globalEntries = (globalSettings[resourceType] ?? []) as string[];\n\t\t\tconst projectEntries = (projectSettings[resourceType] ?? []) as string[];\n\t\t\tthis.resolveLocalEntries(\n\t\t\t\tprojectEntries,\n\t\t\t\tresourceType,\n\t\t\t\ttarget,\n\t\t\t\t{\n\t\t\t\t\tsource: \"local\",\n\t\t\t\t\tscope: \"project\",\n\t\t\t\t\torigin: \"top-level\",\n\t\t\t\t},\n\t\t\t\tprojectBaseDir,\n\t\t\t);\n\t\t\tthis.resolveLocalEntries(\n\t\t\t\tglobalEntries,\n\t\t\t\tresourceType,\n\t\t\t\ttarget,\n\t\t\t\t{\n\t\t\t\t\tsource: \"local\",\n\t\t\t\t\tscope: \"user\",\n\t\t\t\t\torigin: \"top-level\",\n\t\t\t\t},\n\t\t\t\tglobalBaseDir,\n\t\t\t);\n\t\t}\n\n\t\tthis.addAutoDiscoveredResources(accumulator, globalSettings, projectSettings, globalBaseDir, projectBaseDir);\n\n\t\treturn this.toResolvedPaths(accumulator);\n\t}\n\n\tasync resolveExtensionSources(\n\t\tsources: string[],\n\t\toptions?: { local?: boolean; temporary?: boolean },\n\t): Promise<ResolvedPaths> {\n\t\tconst accumulator = this.createAccumulator();\n\t\tconst scope: SourceScope = options?.temporary ? \"temporary\" : options?.local ? \"project\" : \"user\";\n\t\tconst packageSources = sources.map((source) => ({ pkg: source as PackageSource, scope }));\n\t\tawait this.resolvePackageSources(packageSources, accumulator);\n\t\treturn this.toResolvedPaths(accumulator);\n\t}\n\n\tasync install(source: string, options?: { local?: boolean }): Promise<void> {\n\t\tconst parsed = this.parseSource(source);\n\t\tconst scope: SourceScope = options?.local ? \"project\" : \"user\";\n\t\tawait this.withProgress(\"install\", source, `Installing ${source}...`, async () => {\n\t\t\tif (parsed.type === \"npm\") {\n\t\t\t\tawait this.installNpm(parsed, scope, false);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (parsed.type === \"git\") {\n\t\t\t\tawait this.installGit(parsed, scope);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (parsed.type === \"local\") {\n\t\t\t\tconst resolved = this.resolvePath(parsed.path);\n\t\t\t\tif (!existsSync(resolved)) {\n\t\t\t\t\tthrow new Error(`Path does not exist: ${resolved}`);\n\t\t\t\t}\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tthrow new Error(`Unsupported install source: ${source}`);\n\t\t});\n\t}\n\n\tasync remove(source: string, options?: { local?: boolean }): Promise<void> {\n\t\tconst parsed = this.parseSource(source);\n\t\tconst scope: SourceScope = options?.local ? \"project\" : \"user\";\n\t\tawait this.withProgress(\"remove\", source, `Removing ${source}...`, async () => {\n\t\t\tif (parsed.type === \"npm\") {\n\t\t\t\tawait this.uninstallNpm(parsed, scope);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (parsed.type === \"git\") {\n\t\t\t\tawait this.removeGit(parsed, scope);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (parsed.type === \"local\") {\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tthrow new Error(`Unsupported remove source: ${source}`);\n\t\t});\n\t}\n\n\tasync update(source?: string): Promise<void> {\n\t\tconst globalSettings = this.settingsManager.getGlobalSettings();\n\t\tconst projectSettings = this.settingsManager.getProjectSettings();\n\t\tconst identity = source ? this.getPackageIdentity(source) : undefined;\n\n\t\tfor (const pkg of globalSettings.packages ?? []) {\n\t\t\tconst sourceStr = typeof pkg === \"string\" ? pkg : pkg.source;\n\t\t\tif (identity && this.getPackageIdentity(sourceStr, \"user\") !== identity) continue;\n\t\t\tawait this.updateSourceForScope(sourceStr, \"user\");\n\t\t}\n\t\tfor (const pkg of projectSettings.packages ?? []) {\n\t\t\tconst sourceStr = typeof pkg === \"string\" ? pkg : pkg.source;\n\t\t\tif (identity && this.getPackageIdentity(sourceStr, \"project\") !== identity) continue;\n\t\t\tawait this.updateSourceForScope(sourceStr, \"project\");\n\t\t}\n\t}\n\n\tprivate async updateSourceForScope(source: string, scope: SourceScope): Promise<void> {\n\t\tif (isOfflineModeEnabled()) {\n\t\t\treturn;\n\t\t}\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\tif (parsed.pinned) return;\n\t\t\tawait this.withProgress(\"update\", source, `Updating ${source}...`, async () => {\n\t\t\t\tawait this.installNpm(parsed, scope, false);\n\t\t\t});\n\t\t\treturn;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\tif (parsed.pinned) return;\n\t\t\tawait this.withProgress(\"update\", source, `Updating ${source}...`, async () => {\n\t\t\t\tawait this.updateGit(parsed, scope);\n\t\t\t});\n\t\t\treturn;\n\t\t}\n\t}\n\n\tasync checkForAvailableUpdates(): Promise<PackageUpdate[]> {\n\t\tif (isOfflineModeEnabled()) {\n\t\t\treturn [];\n\t\t}\n\n\t\tconst globalSettings = this.settingsManager.getGlobalSettings();\n\t\tconst projectSettings = this.settingsManager.getProjectSettings();\n\t\tconst allPackages: Array<{ pkg: PackageSource; scope: SourceScope }> = [];\n\t\tfor (const pkg of projectSettings.packages ?? []) {\n\t\t\tallPackages.push({ pkg, scope: \"project\" });\n\t\t}\n\t\tfor (const pkg of globalSettings.packages ?? []) {\n\t\t\tallPackages.push({ pkg, scope: \"user\" });\n\t\t}\n\n\t\tconst packageSources = this.dedupePackages(allPackages);\n\t\tconst checks = packageSources\n\t\t\t.filter(\n\t\t\t\t(entry): entry is { pkg: PackageSource; scope: Exclude<SourceScope, \"temporary\"> } =>\n\t\t\t\t\tentry.scope !== \"temporary\",\n\t\t\t)\n\t\t\t.map((entry) => async (): Promise<PackageUpdate | undefined> => {\n\t\t\t\tconst source = typeof entry.pkg === \"string\" ? entry.pkg : entry.pkg.source;\n\t\t\t\tconst parsed = this.parseSource(source);\n\t\t\t\tif (parsed.type === \"local\" || parsed.pinned) {\n\t\t\t\t\treturn undefined;\n\t\t\t\t}\n\n\t\t\t\tif (parsed.type === \"npm\") {\n\t\t\t\t\tconst installedPath = this.getNpmInstallPath(parsed, entry.scope);\n\t\t\t\t\tif (!existsSync(installedPath)) {\n\t\t\t\t\t\treturn undefined;\n\t\t\t\t\t}\n\t\t\t\t\tconst hasUpdate = await this.npmHasAvailableUpdate(parsed, installedPath);\n\t\t\t\t\tif (!hasUpdate) {\n\t\t\t\t\t\treturn undefined;\n\t\t\t\t\t}\n\t\t\t\t\treturn {\n\t\t\t\t\t\tsource,\n\t\t\t\t\t\tdisplayName: parsed.name,\n\t\t\t\t\t\ttype: \"npm\",\n\t\t\t\t\t\tscope: entry.scope,\n\t\t\t\t\t};\n\t\t\t\t}\n\n\t\t\t\tconst installedPath = this.getGitInstallPath(parsed, entry.scope);\n\t\t\t\tif (!existsSync(installedPath)) {\n\t\t\t\t\treturn undefined;\n\t\t\t\t}\n\t\t\t\tconst hasUpdate = await this.gitHasAvailableUpdate(installedPath);\n\t\t\t\tif (!hasUpdate) {\n\t\t\t\t\treturn undefined;\n\t\t\t\t}\n\t\t\t\treturn {\n\t\t\t\t\tsource,\n\t\t\t\t\tdisplayName: `${parsed.host}/${parsed.path}`,\n\t\t\t\t\ttype: \"git\",\n\t\t\t\t\tscope: entry.scope,\n\t\t\t\t};\n\t\t\t});\n\n\t\tconst results = await this.runWithConcurrency(checks, UPDATE_CHECK_CONCURRENCY);\n\t\treturn results.filter((result): result is PackageUpdate => result !== undefined);\n\t}\n\n\tprivate async resolvePackageSources(\n\t\tsources: Array<{ pkg: PackageSource; scope: SourceScope }>,\n\t\taccumulator: ResourceAccumulator,\n\t\tonMissing?: (source: string) => Promise<MissingSourceAction>,\n\t): Promise<void> {\n\t\tfor (const { pkg, scope } of sources) {\n\t\t\tconst sourceStr = typeof pkg === \"string\" ? pkg : pkg.source;\n\t\t\tconst filter = typeof pkg === \"object\" ? pkg : undefined;\n\t\t\tconst parsed = this.parseSource(sourceStr);\n\t\t\tconst metadata: PathMetadata = { source: sourceStr, scope, origin: \"package\" };\n\n\t\t\tif (parsed.type === \"local\") {\n\t\t\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\t\t\tthis.resolveLocalExtensionSource(parsed, accumulator, filter, metadata, baseDir);\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tconst installMissing = async (): Promise<boolean> => {\n\t\t\t\tif (isOfflineModeEnabled()) {\n\t\t\t\t\treturn false;\n\t\t\t\t}\n\t\t\t\tif (!onMissing) {\n\t\t\t\t\tawait this.installParsedSource(parsed, scope);\n\t\t\t\t\treturn true;\n\t\t\t\t}\n\t\t\t\tconst action = await onMissing(sourceStr);\n\t\t\t\tif (action === \"skip\") return false;\n\t\t\t\tif (action === \"error\") throw new Error(`Missing source: ${sourceStr}`);\n\t\t\t\tawait this.installParsedSource(parsed, scope);\n\t\t\t\treturn true;\n\t\t\t};\n\n\t\t\tif (parsed.type === \"npm\") {\n\t\t\t\tconst installedPath = this.getNpmInstallPath(parsed, scope);\n\t\t\t\tconst needsInstall =\n\t\t\t\t\t!existsSync(installedPath) ||\n\t\t\t\t\t(parsed.pinned && !(await this.installedNpmMatchesPinnedVersion(parsed, installedPath)));\n\t\t\t\tif (needsInstall) {\n\t\t\t\t\tconst installed = await installMissing();\n\t\t\t\t\tif (!installed) continue;\n\t\t\t\t}\n\t\t\t\tmetadata.baseDir = installedPath;\n\t\t\t\tthis.collectPackageResources(installedPath, accumulator, filter, metadata);\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tif (parsed.type === \"git\") {\n\t\t\t\tconst installedPath = this.getGitInstallPath(parsed, scope);\n\t\t\t\tif (!existsSync(installedPath)) {\n\t\t\t\t\tconst installed = await installMissing();\n\t\t\t\t\tif (!installed) continue;\n\t\t\t\t} else if (scope === \"temporary\" && !parsed.pinned && !isOfflineModeEnabled()) {\n\t\t\t\t\tawait this.refreshTemporaryGitSource(parsed, sourceStr);\n\t\t\t\t}\n\t\t\t\tmetadata.baseDir = installedPath;\n\t\t\t\tthis.collectPackageResources(installedPath, accumulator, filter, metadata);\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate resolveLocalExtensionSource(\n\t\tsource: LocalSource,\n\t\taccumulator: ResourceAccumulator,\n\t\tfilter: PackageFilter | undefined,\n\t\tmetadata: PathMetadata,\n\t\tbaseDir: string,\n\t): void {\n\t\tconst resolved = this.resolvePathFromBase(source.path, baseDir);\n\t\tif (!existsSync(resolved)) {\n\t\t\treturn;\n\t\t}\n\n\t\ttry {\n\t\t\tconst stats = statSync(resolved);\n\t\t\tif (stats.isFile()) {\n\t\t\t\tmetadata.baseDir = dirname(resolved);\n\t\t\t\tthis.addResource(accumulator.extensions, resolved, metadata, true);\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (stats.isDirectory()) {\n\t\t\t\tmetadata.baseDir = resolved;\n\t\t\t\tconst resources = this.collectPackageResources(resolved, accumulator, filter, metadata);\n\t\t\t\tif (!resources) {\n\t\t\t\t\tthis.addResource(accumulator.extensions, resolved, metadata, true);\n\t\t\t\t}\n\t\t\t}\n\t\t} catch {\n\t\t\treturn;\n\t\t}\n\t}\n\n\tprivate async installParsedSource(parsed: ParsedSource, scope: SourceScope): Promise<void> {\n\t\tif (parsed.type === \"npm\") {\n\t\t\tawait this.installNpm(parsed, scope, scope === \"temporary\");\n\t\t\treturn;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\tawait this.installGit(parsed, scope);\n\t\t\treturn;\n\t\t}\n\t}\n\n\tprivate getPackageSourceString(pkg: PackageSource): string {\n\t\treturn typeof pkg === \"string\" ? pkg : pkg.source;\n\t}\n\n\tprivate getSourceMatchKeyForInput(source: string): string {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\treturn `npm:${parsed.name}`;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\treturn `git:${parsed.host}/${parsed.path}`;\n\t\t}\n\t\treturn `local:${this.resolvePath(parsed.path)}`;\n\t}\n\n\tprivate getSourceMatchKeyForSettings(source: string, scope: SourceScope): string {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\treturn `npm:${parsed.name}`;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\treturn `git:${parsed.host}/${parsed.path}`;\n\t\t}\n\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\treturn `local:${this.resolvePathFromBase(parsed.path, baseDir)}`;\n\t}\n\n\tprivate packageSourcesMatch(existing: PackageSource, inputSource: string, scope: SourceScope): boolean {\n\t\tconst left = this.getSourceMatchKeyForSettings(this.getPackageSourceString(existing), scope);\n\t\tconst right = this.getSourceMatchKeyForInput(inputSource);\n\t\treturn left === right;\n\t}\n\n\tprivate normalizePackageSourceForSettings(source: string, scope: SourceScope): string {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type !== \"local\") {\n\t\t\treturn source;\n\t\t}\n\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\tconst resolved = this.resolvePath(parsed.path);\n\t\tconst rel = relative(baseDir, resolved);\n\t\treturn rel || \".\";\n\t}\n\n\tprivate parseSource(source: string): ParsedSource {\n\t\tif (source.startsWith(\"npm:\")) {\n\t\t\tconst spec = source.slice(\"npm:\".length).trim();\n\t\t\tconst { name, version } = this.parseNpmSpec(spec);\n\t\t\treturn {\n\t\t\t\ttype: \"npm\",\n\t\t\t\tspec,\n\t\t\t\tname,\n\t\t\t\tpinned: Boolean(version),\n\t\t\t};\n\t\t}\n\n\t\tconst trimmed = source.trim();\n\t\tconst isWindowsAbsolutePath = /^[A-Za-z]:[\\\\/]|^\\\\\\\\/.test(trimmed);\n\t\tconst isLocalPathLike =\n\t\t\ttrimmed.startsWith(\".\") ||\n\t\t\ttrimmed.startsWith(\"/\") ||\n\t\t\ttrimmed === \"~\" ||\n\t\t\ttrimmed.startsWith(\"~/\") ||\n\t\t\tisWindowsAbsolutePath;\n\t\tif (isLocalPathLike) {\n\t\t\treturn { type: \"local\", path: source };\n\t\t}\n\n\t\t// Try parsing as git URL\n\t\tconst gitParsed = parseGitUrl(source);\n\t\tif (gitParsed) {\n\t\t\treturn gitParsed;\n\t\t}\n\n\t\treturn { type: \"local\", path: source };\n\t}\n\n\tprivate async installedNpmMatchesPinnedVersion(source: NpmSource, installedPath: string): Promise<boolean> {\n\t\tconst installedVersion = this.getInstalledNpmVersion(installedPath);\n\t\tif (!installedVersion) {\n\t\t\treturn false;\n\t\t}\n\n\t\tconst { version: pinnedVersion } = this.parseNpmSpec(source.spec);\n\t\tif (!pinnedVersion) {\n\t\t\treturn true;\n\t\t}\n\n\t\treturn installedVersion === pinnedVersion;\n\t}\n\n\tprivate async npmHasAvailableUpdate(source: NpmSource, installedPath: string): Promise<boolean> {\n\t\tif (isOfflineModeEnabled()) {\n\t\t\treturn false;\n\t\t}\n\n\t\tconst installedVersion = this.getInstalledNpmVersion(installedPath);\n\t\tif (!installedVersion) {\n\t\t\treturn false;\n\t\t}\n\n\t\ttry {\n\t\t\tconst latestVersion = await this.getLatestNpmVersion(source.name);\n\t\t\treturn latestVersion !== installedVersion;\n\t\t} catch {\n\t\t\treturn false;\n\t\t}\n\t}\n\n\tprivate getInstalledNpmVersion(installedPath: string): string | undefined {\n\t\tconst packageJsonPath = join(installedPath, \"package.json\");\n\t\tif (!existsSync(packageJsonPath)) return undefined;\n\t\ttry {\n\t\t\tconst content = readFileSync(packageJsonPath, \"utf-8\");\n\t\t\tconst pkg = JSON.parse(content) as { version?: string };\n\t\t\treturn pkg.version;\n\t\t} catch {\n\t\t\treturn undefined;\n\t\t}\n\t}\n\n\tprivate async getLatestNpmVersion(packageName: string): Promise<string> {\n\t\tconst response = await fetch(`https://registry.npmjs.org/${packageName}/latest`, {\n\t\t\tsignal: AbortSignal.timeout(NETWORK_TIMEOUT_MS),\n\t\t});\n\t\tif (!response.ok) throw new Error(`Failed to fetch npm registry: ${response.status}`);\n\t\tconst data = (await response.json()) as { version: string };\n\t\treturn data.version;\n\t}\n\n\tprivate async gitHasAvailableUpdate(installedPath: string): Promise<boolean> {\n\t\tif (isOfflineModeEnabled()) {\n\t\t\treturn false;\n\t\t}\n\n\t\ttry {\n\t\t\tconst localHead = await this.runCommandCapture(\"git\", [\"rev-parse\", \"HEAD\"], {\n\t\t\t\tcwd: installedPath,\n\t\t\t\ttimeoutMs: NETWORK_TIMEOUT_MS,\n\t\t\t});\n\t\t\tconst remoteHead = await this.getRemoteGitHead(installedPath);\n\t\t\treturn localHead.trim() !== remoteHead.trim();\n\t\t} catch {\n\t\t\treturn false;\n\t\t}\n\t}\n\n\tprivate async getRemoteGitHead(installedPath: string): Promise<string> {\n\t\tconst upstreamRef = await this.getGitUpstreamRef(installedPath);\n\t\tif (upstreamRef) {\n\t\t\tconst remoteHead = await this.runGitRemoteCommand(installedPath, [\"ls-remote\", \"origin\", upstreamRef]);\n\t\t\tconst match = remoteHead.match(/^([0-9a-f]{40})\\s+/m);\n\t\t\tif (match?.[1]) {\n\t\t\t\treturn match[1];\n\t\t\t}\n\t\t}\n\n\t\tconst remoteHead = await this.runGitRemoteCommand(installedPath, [\"ls-remote\", \"origin\", \"HEAD\"]);\n\t\tconst match = remoteHead.match(/^([0-9a-f]{40})\\s+HEAD$/m);\n\t\tif (!match?.[1]) {\n\t\t\tthrow new Error(\"Failed to determine remote HEAD\");\n\t\t}\n\t\treturn match[1];\n\t}\n\n\tprivate async getGitUpstreamRef(installedPath: string): Promise<string | undefined> {\n\t\ttry {\n\t\t\tconst upstream = await this.runCommandCapture(\"git\", [\"rev-parse\", \"--abbrev-ref\", \"@{upstream}\"], {\n\t\t\t\tcwd: installedPath,\n\t\t\t\ttimeoutMs: NETWORK_TIMEOUT_MS,\n\t\t\t});\n\t\t\tconst trimmed = upstream.trim();\n\t\t\tif (!trimmed.startsWith(\"origin/\")) {\n\t\t\t\treturn undefined;\n\t\t\t}\n\t\t\tconst branch = trimmed.slice(\"origin/\".length);\n\t\t\treturn branch ? `refs/heads/${branch}` : undefined;\n\t\t} catch {\n\t\t\treturn undefined;\n\t\t}\n\t}\n\n\tprivate runGitRemoteCommand(installedPath: string, args: string[]): Promise<string> {\n\t\treturn this.runCommandCapture(\"git\", args, {\n\t\t\tcwd: installedPath,\n\t\t\ttimeoutMs: NETWORK_TIMEOUT_MS,\n\t\t\tenv: {\n\t\t\t\tGIT_TERMINAL_PROMPT: \"0\",\n\t\t\t},\n\t\t});\n\t}\n\n\tprivate async runWithConcurrency<T>(tasks: Array<() => Promise<T>>, limit: number): Promise<T[]> {\n\t\tif (tasks.length === 0) {\n\t\t\treturn [];\n\t\t}\n\n\t\tconst results: T[] = new Array(tasks.length);\n\t\tlet nextIndex = 0;\n\t\tconst workerCount = Math.max(1, Math.min(limit, tasks.length));\n\n\t\tconst worker = async () => {\n\t\t\twhile (true) {\n\t\t\t\tconst index = nextIndex;\n\t\t\t\tnextIndex += 1;\n\t\t\t\tif (index >= tasks.length) {\n\t\t\t\t\treturn;\n\t\t\t\t}\n\t\t\t\tresults[index] = await tasks[index]();\n\t\t\t}\n\t\t};\n\n\t\tawait Promise.all(Array.from({ length: workerCount }, () => worker()));\n\t\treturn results;\n\t}\n\n\t/**\n\t * Get a unique identity for a package, ignoring version/ref.\n\t * Used to detect when the same package is in both global and project settings.\n\t * For git packages, uses normalized host/path to ensure SSH and HTTPS URLs\n\t * for the same repository are treated as identical.\n\t */\n\tprivate getPackageIdentity(source: string, scope?: SourceScope): string {\n\t\tconst parsed = this.parseSource(source);\n\t\tif (parsed.type === \"npm\") {\n\t\t\treturn `npm:${parsed.name}`;\n\t\t}\n\t\tif (parsed.type === \"git\") {\n\t\t\t// Use host/path for identity to normalize SSH and HTTPS\n\t\t\treturn `git:${parsed.host}/${parsed.path}`;\n\t\t}\n\t\tif (scope) {\n\t\t\tconst baseDir = this.getBaseDirForScope(scope);\n\t\t\treturn `local:${this.resolvePathFromBase(parsed.path, baseDir)}`;\n\t\t}\n\t\treturn `local:${this.resolvePath(parsed.path)}`;\n\t}\n\n\t/**\n\t * Dedupe packages: if same package identity appears in both global and project,\n\t * keep only the project one (project wins).\n\t */\n\tprivate dedupePackages(\n\t\tpackages: Array<{ pkg: PackageSource; scope: SourceScope }>,\n\t): Array<{ pkg: PackageSource; scope: SourceScope }> {\n\t\tconst seen = new Map<string, { pkg: PackageSource; scope: SourceScope }>();\n\n\t\tfor (const entry of packages) {\n\t\t\tconst sourceStr = typeof entry.pkg === \"string\" ? entry.pkg : entry.pkg.source;\n\t\t\tconst identity = this.getPackageIdentity(sourceStr, entry.scope);\n\n\t\t\tconst existing = seen.get(identity);\n\t\t\tif (!existing) {\n\t\t\t\tseen.set(identity, entry);\n\t\t\t} else if (entry.scope === \"project\" && existing.scope === \"user\") {\n\t\t\t\t// Project wins over user\n\t\t\t\tseen.set(identity, entry);\n\t\t\t}\n\t\t\t// If existing is project and new is global, keep existing (project)\n\t\t\t// If both are same scope, keep first one\n\t\t}\n\n\t\treturn Array.from(seen.values());\n\t}\n\n\tprivate parseNpmSpec(spec: string): { name: string; version?: string } {\n\t\tconst match = spec.match(/^(@?[^@]+(?:\\/[^@]+)?)(?:@(.+))?$/);\n\t\tif (!match) {\n\t\t\treturn { name: spec };\n\t\t}\n\t\tconst name = match[1] ?? spec;\n\t\tconst version = match[2];\n\t\treturn { name, version };\n\t}\n\n\tprivate getNpmCommand(): { command: string; args: string[] } {\n\t\tconst configuredCommand = this.settingsManager.getNpmCommand();\n\t\tif (!configuredCommand || configuredCommand.length === 0) {\n\t\t\treturn { command: \"npm\", args: [] };\n\t\t}\n\t\tconst [command, ...args] = configuredCommand;\n\t\tif (!command) {\n\t\t\tthrow new Error(\"Invalid npmCommand: first array entry must be a non-empty command\");\n\t\t}\n\t\treturn { command, args };\n\t}\n\n\tprivate async runNpmCommand(args: string[], options?: { cwd?: string }): Promise<void> {\n\t\tconst npmCommand = this.getNpmCommand();\n\t\tawait this.runCommand(npmCommand.command, [...npmCommand.args, ...args], options);\n\t}\n\n\tprivate runNpmCommandSync(args: string[]): string {\n\t\tconst npmCommand = this.getNpmCommand();\n\t\treturn this.runCommandSync(npmCommand.command, [...npmCommand.args, ...args]);\n\t}\n\n\tprivate async installNpm(source: NpmSource, scope: SourceScope, temporary: boolean): Promise<void> {\n\t\tif (scope === \"user\" && !temporary) {\n\t\t\tawait this.runNpmCommand([\"install\", \"-g\", source.spec]);\n\t\t\treturn;\n\t\t}\n\t\tconst installRoot = this.getNpmInstallRoot(scope, temporary);\n\t\tthis.ensureNpmProject(installRoot);\n\t\tawait this.runNpmCommand([\"install\", source.spec, \"--prefix\", installRoot]);\n\t}\n\n\tprivate async uninstallNpm(source: NpmSource, scope: SourceScope): Promise<void> {\n\t\tif (scope === \"user\") {\n\t\t\tawait this.runNpmCommand([\"uninstall\", \"-g\", source.name]);\n\t\t\treturn;\n\t\t}\n\t\tconst installRoot = this.getNpmInstallRoot(scope, false);\n\t\tif (!existsSync(installRoot)) {\n\t\t\treturn;\n\t\t}\n\t\tawait this.runNpmCommand([\"uninstall\", source.name, \"--prefix\", installRoot]);\n\t}\n\n\tprivate async installGit(source: GitSource, scope: SourceScope): Promise<void> {\n\t\tconst targetDir = this.getGitInstallPath(source, scope);\n\t\tif (existsSync(targetDir)) {\n\t\t\treturn;\n\t\t}\n\t\tconst gitRoot = this.getGitInstallRoot(scope);\n\t\tif (gitRoot) {\n\t\t\tthis.ensureGitIgnore(gitRoot);\n\t\t}\n\t\tmkdirSync(dirname(targetDir), { recursive: true });\n\n\t\tawait this.runCommand(\"git\", [\"clone\", source.repo, targetDir]);\n\t\tif (source.ref) {\n\t\t\tawait this.runCommand(\"git\", [\"checkout\", source.ref], { cwd: targetDir });\n\t\t}\n\t\tconst packageJsonPath = join(targetDir, \"package.json\");\n\t\tif (existsSync(packageJsonPath)) {\n\t\t\tawait this.runNpmCommand([\"install\"], { cwd: targetDir });\n\t\t}\n\t}\n\n\tprivate async updateGit(source: GitSource, scope: SourceScope): Promise<void> {\n\t\tconst targetDir = this.getGitInstallPath(source, scope);\n\t\tif (!existsSync(targetDir)) {\n\t\t\tawait this.installGit(source, scope);\n\t\t\treturn;\n\t\t}\n\n\t\t// Fetch latest from remote (handles force-push by getting new history)\n\t\tawait this.runCommand(\"git\", [\"fetch\", \"--prune\", \"origin\"], { cwd: targetDir });\n\n\t\t// Reset to tracking branch. Fall back to origin/HEAD when no upstream is configured.\n\t\ttry {\n\t\t\tawait this.runCommand(\"git\", [\"reset\", \"--hard\", \"@{upstream}\"], { cwd: targetDir });\n\t\t} catch {\n\t\t\tawait this.runCommand(\"git\", [\"remote\", \"set-head\", \"origin\", \"-a\"], { cwd: targetDir }).catch(() => {});\n\t\t\tawait this.runCommand(\"git\", [\"reset\", \"--hard\", \"origin/HEAD\"], { cwd: targetDir });\n\t\t}\n\n\t\t// Clean untracked files (extensions should be pristine)\n\t\tawait this.runCommand(\"git\", [\"clean\", \"-fdx\"], { cwd: targetDir });\n\n\t\tconst packageJsonPath = join(targetDir, \"package.json\");\n\t\tif (existsSync(packageJsonPath)) {\n\t\t\tawait this.runNpmCommand([\"install\"], { cwd: targetDir });\n\t\t}\n\t}\n\n\tprivate async refreshTemporaryGitSource(source: GitSource, sourceStr: string): Promise<void> {\n\t\tif (isOfflineModeEnabled()) {\n\t\t\treturn;\n\t\t}\n\t\ttry {\n\t\t\tawait this.withProgress(\"pull\", sourceStr, `Refreshing ${sourceStr}...`, async () => {\n\t\t\t\tawait this.updateGit(source, \"temporary\");\n\t\t\t});\n\t\t} catch {\n\t\t\t// Keep cached temporary checkout if refresh fails.\n\t\t}\n\t}\n\n\tprivate async removeGit(source: GitSource, scope: SourceScope): Promise<void> {\n\t\tconst targetDir = this.getGitInstallPath(source, scope);\n\t\tif (!existsSync(targetDir)) return;\n\t\trmSync(targetDir, { recursive: true, force: true });\n\t\tthis.pruneEmptyGitParents(targetDir, this.getGitInstallRoot(scope));\n\t}\n\n\tprivate pruneEmptyGitParents(targetDir: string, installRoot: string | undefined): void {\n\t\tif (!installRoot) return;\n\t\tconst resolvedRoot = resolve(installRoot);\n\t\tlet current = dirname(targetDir);\n\t\twhile (current.startsWith(resolvedRoot) && current !== resolvedRoot) {\n\t\t\tif (!existsSync(current)) {\n\t\t\t\tcurrent = dirname(current);\n\t\t\t\tcontinue;\n\t\t\t}\n\t\t\tconst entries = readdirSync(current);\n\t\t\tif (entries.length > 0) {\n\t\t\t\tbreak;\n\t\t\t}\n\t\t\ttry {\n\t\t\t\trmSync(current, { recursive: true, force: true });\n\t\t\t} catch {\n\t\t\t\tbreak;\n\t\t\t}\n\t\t\tcurrent = dirname(current);\n\t\t}\n\t}\n\n\tprivate ensureNpmProject(installRoot: string): void {\n\t\tif (!existsSync(installRoot)) {\n\t\t\tmkdirSync(installRoot, { recursive: true });\n\t\t}\n\t\tthis.ensureGitIgnore(installRoot);\n\t\tconst packageJsonPath = join(installRoot, \"package.json\");\n\t\tif (!existsSync(packageJsonPath)) {\n\t\t\tconst pkgJson = { name: \"pi-extensions\", private: true };\n\t\t\twriteFileSync(packageJsonPath, JSON.stringify(pkgJson, null, 2), \"utf-8\");\n\t\t}\n\t}\n\n\tprivate ensureGitIgnore(dir: string): void {\n\t\tif (!existsSync(dir)) {\n\t\t\tmkdirSync(dir, { recursive: true });\n\t\t}\n\t\tconst ignorePath = join(dir, \".gitignore\");\n\t\tif (!existsSync(ignorePath)) {\n\t\t\twriteFileSync(ignorePath, \"*\\n!.gitignore\\n\", \"utf-8\");\n\t\t}\n\t}\n\n\tprivate getNpmInstallRoot(scope: SourceScope, temporary: boolean): string {\n\t\tif (temporary) {\n\t\t\treturn this.getTemporaryDir(\"npm\");\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME, \"npm\");\n\t\t}\n\t\treturn join(this.getGlobalNpmRoot(), \"..\");\n\t}\n\n\tprivate getGlobalNpmRoot(): string {\n\t\tconst npmCommand = this.getNpmCommand();\n\t\tconst commandKey = [npmCommand.command, ...npmCommand.args].join(\"\\0\");\n\t\tif (this.globalNpmRoot && this.globalNpmRootCommandKey === commandKey) {\n\t\t\treturn this.globalNpmRoot;\n\t\t}\n\t\tconst result = this.runNpmCommandSync([\"root\", \"-g\"]);\n\t\tthis.globalNpmRoot = result.trim();\n\t\tthis.globalNpmRootCommandKey = commandKey;\n\t\treturn this.globalNpmRoot;\n\t}\n\n\tprivate getNpmInstallPath(source: NpmSource, scope: SourceScope): string {\n\t\tif (scope === \"temporary\") {\n\t\t\treturn join(this.getTemporaryDir(\"npm\"), \"node_modules\", source.name);\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME, \"npm\", \"node_modules\", source.name);\n\t\t}\n\t\treturn join(this.getGlobalNpmRoot(), source.name);\n\t}\n\n\tprivate getGitInstallPath(source: GitSource, scope: SourceScope): string {\n\t\tif (scope === \"temporary\") {\n\t\t\treturn this.getTemporaryDir(`git-${source.host}`, source.path);\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME, \"git\", source.host, source.path);\n\t\t}\n\t\treturn join(this.agentDir, \"git\", source.host, source.path);\n\t}\n\n\tprivate getGitInstallRoot(scope: SourceScope): string | undefined {\n\t\tif (scope === \"temporary\") {\n\t\t\treturn undefined;\n\t\t}\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME, \"git\");\n\t\t}\n\t\treturn join(this.agentDir, \"git\");\n\t}\n\n\tprivate getTemporaryDir(prefix: string, suffix?: string): string {\n\t\tconst hash = createHash(\"sha256\")\n\t\t\t.update(`${prefix}-${suffix ?? \"\"}`)\n\t\t\t.digest(\"hex\")\n\t\t\t.slice(0, 8);\n\t\treturn join(tmpdir(), \"pi-extensions\", prefix, hash, suffix ?? \"\");\n\t}\n\n\tprivate getBaseDirForScope(scope: SourceScope): string {\n\t\tif (scope === \"project\") {\n\t\t\treturn join(this.cwd, CONFIG_DIR_NAME);\n\t\t}\n\t\tif (scope === \"user\") {\n\t\t\treturn this.agentDir;\n\t\t}\n\t\treturn this.cwd;\n\t}\n\n\tprivate resolvePath(input: string): string {\n\t\tconst trimmed = input.trim();\n\t\tif (trimmed === \"~\") return getHomeDir();\n\t\tif (trimmed.startsWith(\"~/\")) return join(getHomeDir(), trimmed.slice(2));\n\t\tif (trimmed.startsWith(\"~\")) return join(getHomeDir(), trimmed.slice(1));\n\t\treturn resolve(this.cwd, trimmed);\n\t}\n\n\tprivate resolvePathFromBase(input: string, baseDir: string): string {\n\t\tconst trimmed = input.trim();\n\t\tif (trimmed === \"~\") return getHomeDir();\n\t\tif (trimmed.startsWith(\"~/\")) return join(getHomeDir(), trimmed.slice(2));\n\t\tif (trimmed.startsWith(\"~\")) return join(getHomeDir(), trimmed.slice(1));\n\t\treturn resolve(baseDir, trimmed);\n\t}\n\n\tprivate collectPackageResources(\n\t\tpackageRoot: string,\n\t\taccumulator: ResourceAccumulator,\n\t\tfilter: PackageFilter | undefined,\n\t\tmetadata: PathMetadata,\n\t): boolean {\n\t\tif (filter) {\n\t\t\tfor (const resourceType of RESOURCE_TYPES) {\n\t\t\t\tconst patterns = filter[resourceType as keyof PackageFilter];\n\t\t\t\tconst target = this.getTargetMap(accumulator, resourceType);\n\t\t\t\tif (patterns !== undefined) {\n\t\t\t\t\tthis.applyPackageFilter(packageRoot, patterns, resourceType, target, metadata);\n\t\t\t\t} else {\n\t\t\t\t\tthis.collectDefaultResources(packageRoot, resourceType, target, metadata);\n\t\t\t\t}\n\t\t\t}\n\t\t\treturn true;\n\t\t}\n\n\t\tconst manifest = this.readPiManifest(packageRoot);\n\t\tif (manifest) {\n\t\t\tfor (const resourceType of RESOURCE_TYPES) {\n\t\t\t\tconst entries = manifest[resourceType as keyof PiManifest];\n\t\t\t\tthis.addManifestEntries(\n\t\t\t\t\tentries,\n\t\t\t\t\tpackageRoot,\n\t\t\t\t\tresourceType,\n\t\t\t\t\tthis.getTargetMap(accumulator, resourceType),\n\t\t\t\t\tmetadata,\n\t\t\t\t);\n\t\t\t}\n\t\t\treturn true;\n\t\t}\n\n\t\tlet hasAnyDir = false;\n\t\tfor (const resourceType of RESOURCE_TYPES) {\n\t\t\tconst dir = join(packageRoot, resourceType);\n\t\t\tif (existsSync(dir)) {\n\t\t\t\t// Collect all files from the directory (all enabled by default)\n\t\t\t\tconst files = collectResourceFiles(dir, resourceType);\n\t\t\t\tfor (const f of files) {\n\t\t\t\t\tthis.addResource(this.getTargetMap(accumulator, resourceType), f, metadata, true);\n\t\t\t\t}\n\t\t\t\thasAnyDir = true;\n\t\t\t}\n\t\t}\n\t\treturn hasAnyDir;\n\t}\n\n\tprivate collectDefaultResources(\n\t\tpackageRoot: string,\n\t\tresourceType: ResourceType,\n\t\ttarget: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tmetadata: PathMetadata,\n\t): void {\n\t\tconst manifest = this.readPiManifest(packageRoot);\n\t\tconst entries = manifest?.[resourceType as keyof PiManifest];\n\t\tif (entries) {\n\t\t\tthis.addManifestEntries(entries, packageRoot, resourceType, target, metadata);\n\t\t\treturn;\n\t\t}\n\t\tconst dir = join(packageRoot, resourceType);\n\t\tif (existsSync(dir)) {\n\t\t\t// Collect all files from the directory (all enabled by default)\n\t\t\tconst files = collectResourceFiles(dir, resourceType);\n\t\t\tfor (const f of files) {\n\t\t\t\tthis.addResource(target, f, metadata, true);\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate applyPackageFilter(\n\t\tpackageRoot: string,\n\t\tuserPatterns: string[],\n\t\tresourceType: ResourceType,\n\t\ttarget: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tmetadata: PathMetadata,\n\t): void {\n\t\tconst { allFiles } = this.collectManifestFiles(packageRoot, resourceType);\n\n\t\tif (userPatterns.length === 0) {\n\t\t\t// Empty array explicitly disables all resources of this type\n\t\t\tfor (const f of allFiles) {\n\t\t\t\tthis.addResource(target, f, metadata, false);\n\t\t\t}\n\t\t\treturn;\n\t\t}\n\n\t\t// Apply user patterns\n\t\tconst enabledByUser = applyPatterns(allFiles, userPatterns, packageRoot);\n\n\t\tfor (const f of allFiles) {\n\t\t\tconst enabled = enabledByUser.has(f);\n\t\t\tthis.addResource(target, f, metadata, enabled);\n\t\t}\n\t}\n\n\t/**\n\t * Collect all files from a package for a resource type, applying manifest patterns.\n\t * Returns { allFiles, enabledByManifest } where enabledByManifest is the set of files\n\t * that pass the manifest's own patterns.\n\t */\n\tprivate collectManifestFiles(\n\t\tpackageRoot: string,\n\t\tresourceType: ResourceType,\n\t): { allFiles: string[]; enabledByManifest: Set<string> } {\n\t\tconst manifest = this.readPiManifest(packageRoot);\n\t\tconst entries = manifest?.[resourceType as keyof PiManifest];\n\t\tif (entries && entries.length > 0) {\n\t\t\tconst allFiles = this.collectFilesFromManifestEntries(entries, packageRoot, resourceType);\n\t\t\tconst manifestPatterns = entries.filter(isPattern);\n\t\t\tconst enabledByManifest =\n\t\t\t\tmanifestPatterns.length > 0 ? applyPatterns(allFiles, manifestPatterns, packageRoot) : new Set(allFiles);\n\t\t\treturn { allFiles: Array.from(enabledByManifest), enabledByManifest };\n\t\t}\n\n\t\tconst conventionDir = join(packageRoot, resourceType);\n\t\tif (!existsSync(conventionDir)) {\n\t\t\treturn { allFiles: [], enabledByManifest: new Set() };\n\t\t}\n\t\tconst allFiles = collectResourceFiles(conventionDir, resourceType);\n\t\treturn { allFiles, enabledByManifest: new Set(allFiles) };\n\t}\n\n\tprivate readPiManifest(packageRoot: string): PiManifest | null {\n\t\tconst packageJsonPath = join(packageRoot, \"package.json\");\n\t\tif (!existsSync(packageJsonPath)) {\n\t\t\treturn null;\n\t\t}\n\n\t\ttry {\n\t\t\tconst content = readFileSync(packageJsonPath, \"utf-8\");\n\t\t\tconst pkg = JSON.parse(content) as { pi?: PiManifest };\n\t\t\treturn pkg.pi ?? null;\n\t\t} catch {\n\t\t\treturn null;\n\t\t}\n\t}\n\n\tprivate addManifestEntries(\n\t\tentries: string[] | undefined,\n\t\troot: string,\n\t\tresourceType: ResourceType,\n\t\ttarget: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tmetadata: PathMetadata,\n\t): void {\n\t\tif (!entries) return;\n\n\t\tconst allFiles = this.collectFilesFromManifestEntries(entries, root, resourceType);\n\t\tconst patterns = entries.filter(isPattern);\n\t\tconst enabledPaths = applyPatterns(allFiles, patterns, root);\n\n\t\tfor (const f of allFiles) {\n\t\t\tif (enabledPaths.has(f)) {\n\t\t\t\tthis.addResource(target, f, metadata, true);\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate collectFilesFromManifestEntries(entries: string[], root: string, resourceType: ResourceType): string[] {\n\t\tconst plain = entries.filter((entry) => !isPattern(entry));\n\t\tconst resolved = plain.map((entry) => resolve(root, entry));\n\t\treturn this.collectFilesFromPaths(resolved, resourceType);\n\t}\n\n\tprivate resolveLocalEntries(\n\t\tentries: string[],\n\t\tresourceType: ResourceType,\n\t\ttarget: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tmetadata: PathMetadata,\n\t\tbaseDir: string,\n\t): void {\n\t\tif (entries.length === 0) return;\n\n\t\t// Collect all files from plain entries (non-pattern entries)\n\t\tconst { plain, patterns } = splitPatterns(entries);\n\t\tconst resolvedPlain = plain.map((p) => this.resolvePathFromBase(p, baseDir));\n\t\tconst allFiles = this.collectFilesFromPaths(resolvedPlain, resourceType);\n\n\t\t// Determine which files are enabled based on patterns\n\t\tconst enabledPaths = applyPatterns(allFiles, patterns, baseDir);\n\n\t\t// Add all files with their enabled state\n\t\tfor (const f of allFiles) {\n\t\t\tthis.addResource(target, f, metadata, enabledPaths.has(f));\n\t\t}\n\t}\n\n\tprivate addAutoDiscoveredResources(\n\t\taccumulator: ResourceAccumulator,\n\t\tglobalSettings: ReturnType<SettingsManager[\"getGlobalSettings\"]>,\n\t\tprojectSettings: ReturnType<SettingsManager[\"getProjectSettings\"]>,\n\t\tglobalBaseDir: string,\n\t\tprojectBaseDir: string,\n\t): void {\n\t\tconst userMetadata: PathMetadata = {\n\t\t\tsource: \"auto\",\n\t\t\tscope: \"user\",\n\t\t\torigin: \"top-level\",\n\t\t\tbaseDir: globalBaseDir,\n\t\t};\n\t\tconst projectMetadata: PathMetadata = {\n\t\t\tsource: \"auto\",\n\t\t\tscope: \"project\",\n\t\t\torigin: \"top-level\",\n\t\t\tbaseDir: projectBaseDir,\n\t\t};\n\n\t\tconst userOverrides = {\n\t\t\textensions: (globalSettings.extensions ?? []) as string[],\n\t\t\tskills: (globalSettings.skills ?? []) as string[],\n\t\t\tprompts: (globalSettings.prompts ?? []) as string[],\n\t\t\tthemes: (globalSettings.themes ?? []) as string[],\n\t\t};\n\t\tconst projectOverrides = {\n\t\t\textensions: (projectSettings.extensions ?? []) as string[],\n\t\t\tskills: (projectSettings.skills ?? []) as string[],\n\t\t\tprompts: (projectSettings.prompts ?? []) as string[],\n\t\t\tthemes: (projectSettings.themes ?? []) as string[],\n\t\t};\n\n\t\tconst userDirs = {\n\t\t\textensions: join(globalBaseDir, \"extensions\"),\n\t\t\tskills: join(globalBaseDir, \"skills\"),\n\t\t\tprompts: join(globalBaseDir, \"prompts\"),\n\t\t\tthemes: join(globalBaseDir, \"themes\"),\n\t\t};\n\t\tconst projectDirs = {\n\t\t\textensions: join(projectBaseDir, \"extensions\"),\n\t\t\tskills: join(projectBaseDir, \"skills\"),\n\t\t\tprompts: join(projectBaseDir, \"prompts\"),\n\t\t\tthemes: join(projectBaseDir, \"themes\"),\n\t\t};\n\t\tconst userAgentsSkillsDir = join(getHomeDir(), \".agents\", \"skills\");\n\t\tconst projectAgentsSkillDirs = collectAncestorAgentsSkillDirs(this.cwd).filter(\n\t\t\t(dir) => resolve(dir) !== resolve(userAgentsSkillsDir),\n\t\t);\n\n\t\tconst addResources = (\n\t\t\tresourceType: ResourceType,\n\t\t\tpaths: string[],\n\t\t\tmetadata: PathMetadata,\n\t\t\toverrides: string[],\n\t\t\tbaseDir: string,\n\t\t) => {\n\t\t\tconst target = this.getTargetMap(accumulator, resourceType);\n\t\t\tfor (const path of paths) {\n\t\t\t\tconst enabled = isEnabledByOverrides(path, overrides, baseDir);\n\t\t\t\tthis.addResource(target, path, metadata, enabled);\n\t\t\t}\n\t\t};\n\n\t\taddResources(\n\t\t\t\"extensions\",\n\t\t\tcollectAutoExtensionEntries(projectDirs.extensions),\n\t\t\tprojectMetadata,\n\t\t\tprojectOverrides.extensions,\n\t\t\tprojectBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"skills\",\n\t\t\t[\n\t\t\t\t...collectAutoSkillEntries(projectDirs.skills),\n\t\t\t\t...projectAgentsSkillDirs.flatMap((dir) => collectAutoSkillEntries(dir)),\n\t\t\t],\n\t\t\tprojectMetadata,\n\t\t\tprojectOverrides.skills,\n\t\t\tprojectBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"prompts\",\n\t\t\tcollectAutoPromptEntries(projectDirs.prompts),\n\t\t\tprojectMetadata,\n\t\t\tprojectOverrides.prompts,\n\t\t\tprojectBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"themes\",\n\t\t\tcollectAutoThemeEntries(projectDirs.themes),\n\t\t\tprojectMetadata,\n\t\t\tprojectOverrides.themes,\n\t\t\tprojectBaseDir,\n\t\t);\n\n\t\taddResources(\n\t\t\t\"extensions\",\n\t\t\tcollectAutoExtensionEntries(userDirs.extensions),\n\t\t\tuserMetadata,\n\t\t\tuserOverrides.extensions,\n\t\t\tglobalBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"skills\",\n\t\t\t[...collectAutoSkillEntries(userDirs.skills), ...collectAutoSkillEntries(userAgentsSkillsDir)],\n\t\t\tuserMetadata,\n\t\t\tuserOverrides.skills,\n\t\t\tglobalBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"prompts\",\n\t\t\tcollectAutoPromptEntries(userDirs.prompts),\n\t\t\tuserMetadata,\n\t\t\tuserOverrides.prompts,\n\t\t\tglobalBaseDir,\n\t\t);\n\t\taddResources(\n\t\t\t\"themes\",\n\t\t\tcollectAutoThemeEntries(userDirs.themes),\n\t\t\tuserMetadata,\n\t\t\tuserOverrides.themes,\n\t\t\tglobalBaseDir,\n\t\t);\n\t}\n\n\tprivate collectFilesFromPaths(paths: string[], resourceType: ResourceType): string[] {\n\t\tconst files: string[] = [];\n\t\tfor (const p of paths) {\n\t\t\tif (!existsSync(p)) continue;\n\n\t\t\ttry {\n\t\t\t\tconst stats = statSync(p);\n\t\t\t\tif (stats.isFile()) {\n\t\t\t\t\tfiles.push(p);\n\t\t\t\t} else if (stats.isDirectory()) {\n\t\t\t\t\tfiles.push(...collectResourceFiles(p, resourceType));\n\t\t\t\t}\n\t\t\t} catch {\n\t\t\t\t// Ignore errors\n\t\t\t}\n\t\t}\n\t\treturn files;\n\t}\n\n\tprivate getTargetMap(\n\t\taccumulator: ResourceAccumulator,\n\t\tresourceType: ResourceType,\n\t): Map<string, { metadata: PathMetadata; enabled: boolean }> {\n\t\tswitch (resourceType) {\n\t\t\tcase \"extensions\":\n\t\t\t\treturn accumulator.extensions;\n\t\t\tcase \"skills\":\n\t\t\t\treturn accumulator.skills;\n\t\t\tcase \"prompts\":\n\t\t\t\treturn accumulator.prompts;\n\t\t\tcase \"themes\":\n\t\t\t\treturn accumulator.themes;\n\t\t\tdefault:\n\t\t\t\tthrow new Error(`Unknown resource type: ${resourceType}`);\n\t\t}\n\t}\n\n\tprivate addResource(\n\t\tmap: Map<string, { metadata: PathMetadata; enabled: boolean }>,\n\t\tpath: string,\n\t\tmetadata: PathMetadata,\n\t\tenabled: boolean,\n\t): void {\n\t\tif (!path) return;\n\t\tif (!map.has(path)) {\n\t\t\tmap.set(path, { metadata, enabled });\n\t\t}\n\t}\n\n\tprivate createAccumulator(): ResourceAccumulator {\n\t\treturn {\n\t\t\textensions: new Map(),\n\t\t\tskills: new Map(),\n\t\t\tprompts: new Map(),\n\t\t\tthemes: new Map(),\n\t\t};\n\t}\n\n\tprivate toResolvedPaths(accumulator: ResourceAccumulator): ResolvedPaths {\n\t\tconst toResolved = (entries: Map<string, { metadata: PathMetadata; enabled: boolean }>): ResolvedResource[] => {\n\t\t\treturn Array.from(entries.entries()).map(([path, { metadata, enabled }]) => ({\n\t\t\t\tpath,\n\t\t\t\tenabled,\n\t\t\t\tmetadata,\n\t\t\t}));\n\t\t};\n\n\t\treturn {\n\t\t\textensions: toResolved(accumulator.extensions),\n\t\t\tskills: toResolved(accumulator.skills),\n\t\t\tprompts: toResolved(accumulator.prompts),\n\t\t\tthemes: toResolved(accumulator.themes),\n\t\t};\n\t}\n\n\tprivate runCommandCapture(\n\t\tcommand: string,\n\t\targs: string[],\n\t\toptions?: { cwd?: string; timeoutMs?: number; env?: Record<string, string> },\n\t): Promise<string> {\n\t\treturn new Promise((resolvePromise, reject) => {\n\t\t\tconst child = spawn(command, args, {\n\t\t\t\tcwd: options?.cwd,\n\t\t\t\tstdio: [\"ignore\", \"pipe\", \"pipe\"],\n\t\t\t\tshell: process.platform === \"win32\",\n\t\t\t\tenv: options?.env ? { ...process.env, ...options.env } : process.env,\n\t\t\t});\n\t\t\tlet stdout = \"\";\n\t\t\tlet stderr = \"\";\n\t\t\tlet timedOut = false;\n\t\t\tconst timeout =\n\t\t\t\ttypeof options?.timeoutMs === \"number\"\n\t\t\t\t\t? setTimeout(() => {\n\t\t\t\t\t\t\ttimedOut = true;\n\t\t\t\t\t\t\tchild.kill();\n\t\t\t\t\t\t}, options.timeoutMs)\n\t\t\t\t\t: undefined;\n\n\t\t\tchild.stdout?.on(\"data\", (data) => {\n\t\t\t\tstdout += data.toString();\n\t\t\t});\n\t\t\tchild.stderr?.on(\"data\", (data) => {\n\t\t\t\tstderr += data.toString();\n\t\t\t});\n\t\t\tchild.on(\"error\", (error) => {\n\t\t\t\tif (timeout) clearTimeout(timeout);\n\t\t\t\treject(error);\n\t\t\t});\n\t\t\tchild.on(\"exit\", (code) => {\n\t\t\t\tif (timeout) clearTimeout(timeout);\n\t\t\t\tif (timedOut) {\n\t\t\t\t\treject(new Error(`${command} ${args.join(\" \")} timed out after ${options?.timeoutMs}ms`));\n\t\t\t\t\treturn;\n\t\t\t\t}\n\t\t\t\tif (code === 0) {\n\t\t\t\t\tresolvePromise(stdout.trim());\n\t\t\t\t\treturn;\n\t\t\t\t}\n\t\t\t\treject(new Error(`${command} ${args.join(\" \")} failed with code ${code}: ${stderr || stdout}`));\n\t\t\t});\n\t\t});\n\t}\n\n\tprivate runCommand(command: string, args: string[], options?: { cwd?: string }): Promise<void> {\n\t\treturn new Promise((resolvePromise, reject) => {\n\t\t\tconst child = spawn(command, args, {\n\t\t\t\tcwd: options?.cwd,\n\t\t\t\tstdio: \"inherit\",\n\t\t\t\tshell: process.platform === \"win32\",\n\t\t\t});\n\t\t\tchild.on(\"error\", reject);\n\t\t\tchild.on(\"exit\", (code) => {\n\t\t\t\tif (code === 0) {\n\t\t\t\t\tresolvePromise();\n\t\t\t\t} else {\n\t\t\t\t\treject(new Error(`${command} ${args.join(\" \")} failed with code ${code}`));\n\t\t\t\t}\n\t\t\t});\n\t\t});\n\t}\n\n\tprivate runCommandSync(command: string, args: string[]): string {\n\t\tconst result = spawnSync(command, args, {\n\t\t\tstdio: [\"ignore\", \"pipe\", \"pipe\"],\n\t\t\tencoding: \"utf-8\",\n\t\t\tshell: process.platform === \"win32\",\n\t\t});\n\t\tif (result.status !== 0) {\n\t\t\tthrow new Error(`Failed to run ${command} ${args.join(\" \")}: ${result.stderr || result.stdout}`);\n\t\t}\n\t\treturn (result.stdout || result.stderr || \"\").trim();\n\t}\n}\n"]}