@mapequation/infomap 2.4.0 → 2.6.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CHANGELOG.md +46 -0
- package/arguments.d.ts +3 -0
- package/index.d.ts +1 -0
- package/index.js +1 -1
- package/package.json +1 -1
package/CHANGELOG.md
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@@ -2,6 +2,52 @@
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All notable changes to this project will be documented in this file. See [standard-version](https://github.com/conventional-changelog/standard-version) for commit guidelines.
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## [2.6.0](https://github.com/mapequation/infomap/compare/v2.5.0...v2.6.0) (2022-08-09)
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### Features
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* **python:** Add entropy_rate property ([a243dfc](https://github.com/mapequation/infomap/commit/a243dfcdf4629aff85b425d11aa7317b1fc6b80c))
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* Variable Markov time ([#315](https://github.com/mapequation/infomap/issues/315)) ([cd7b25b](https://github.com/mapequation/infomap/commit/cd7b25b8aded24f85034ddc0d2d3bbacb881b24c))
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### Bug Fixes
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* Adjust entropy correction to Miller-Madow ([324c9f7](https://github.com/mapequation/infomap/commit/324c9f757d94b2d045ec77d14b53491ef30aba17))
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* Don't write multilevel json output for aggregated higher-order networks ([1f5e7ea](https://github.com/mapequation/infomap/commit/1f5e7eab31b865fd2208cecbd0ed50642b9ca199))
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* Fix calc entropy rate for undirected networks ([ccd6b6c](https://github.com/mapequation/infomap/commit/ccd6b6cbdb8b322a5e457355a214801301351d4a))
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* **py:** Fix ignored variable_markov_time argument ([eedc777](https://github.com/mapequation/infomap/commit/eedc77705e44255c580d973c9403d1062a6e1712))
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* **py:** Fix test for entropy rate ([78772b5](https://github.com/mapequation/infomap/commit/78772b5b81323d65456220e23456210c48fc0871))
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* **python:** Fix physical leaf node iterator on state networks ([#312](https://github.com/mapequation/infomap/issues/312)) ([4e2918c](https://github.com/mapequation/infomap/commit/4e2918c131beeda4187012e8c9672e3635f77df4)), closes [#313](https://github.com/mapequation/infomap/issues/313)
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* **python:** Only aggregate states into physical nodes when we have a higher-order network ([7e3277c](https://github.com/mapequation/infomap/commit/7e3277c97881057b36756f6328089ed7252234eb))
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* **python:** Segfault when accessing physical_nodes ([cc5c95e](https://github.com/mapequation/infomap/commit/cc5c95e302e5093ee168a9952bbb70dc1e5b74ce)), closes [#300](https://github.com/mapequation/infomap/issues/300)
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## [2.5.0](https://github.com/mapequation/infomap/compare/v2.4.1...v2.5.0) (2022-06-07)
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### Features
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* Output per-module codelength in json ([eae6650](https://github.com/mapequation/infomap/commit/eae6650c48dbf90a938d011f1c736794a786d7ef))
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* Print all trials using --print-all-trials ([e65bea8](https://github.com/mapequation/infomap/commit/e65bea86c21ebcabafb053e79306049e92429ca1)), closes [#298](https://github.com/mapequation/infomap/issues/298)
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* Write node metadata to json ([472b791](https://github.com/mapequation/infomap/commit/472b791742f0f692a0a4b06262b33165245f6f36))
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### Bug Fixes
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* Constrain numerical arguments to sensible values ([174c99f](https://github.com/mapequation/infomap/commit/174c99fb56c4a50a2e11c37208bcec3e98ba4ab4))
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* Don't allow less than 1 trial ([18e97e2](https://github.com/mapequation/infomap/commit/18e97e21d76e7d27520eb2625c281031d72376d3))
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* Json multilevel modules for higher-order networks ([d020c7c](https://github.com/mapequation/infomap/commit/d020c7c444d1227cb26aa249f7cae5e7de5ecaa4)), closes [#266](https://github.com/mapequation/infomap/issues/266)
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* Only print all trials when running with more than 1 trial ([5f9d8b5](https://github.com/mapequation/infomap/commit/5f9d8b5e56ae348b142404f3f775ad526d396c55))
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* **python:** Fix elapsed running time ([1131e84](https://github.com/mapequation/infomap/commit/1131e845243d3053cceae5bdf069569b2856bc4a))
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* **python:** Replace MersenneTwister implementation with stdlib ([be3effd](https://github.com/mapequation/infomap/commit/be3effd9813a00892437c806b62cb8ee15387d3d))
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### [2.4.1](https://github.com/mapequation/infomap/compare/v2.4.0...v2.4.1) (2022-05-27)
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### Bug Fixes
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* Json output causes segfault ([78e80c5](https://github.com/mapequation/infomap/commit/78e80c581edd92001818abdf50066b798251c604))
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## [2.4.0](https://github.com/mapequation/infomap/compare/v2.3.0...v2.4.0) (2022-05-24)
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package/arguments.d.ts
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@@ -22,6 +22,7 @@ export interface Arguments extends Partial<{
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cluLevel: number;
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output: OutputFormats | OutputFormats[];
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hideBipartiteNodes: boolean;
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printAllTrials: boolean;
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twoLevel: boolean;
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flowModel: "undirected" | "directed" | "undirdir" | "outdirdir" | "rawdir";
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directed: boolean;
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entropyCorrected: boolean;
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entropyCorrectionStrength: number;
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markovTime: number;
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variableMarkovTime: boolean;
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variableMarkovTimeStrength: number;
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preferredNumberOfModules: number;
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multilayerRelaxRate: number;
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multilayerRelaxLimit: number;
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