@mapequation/infomap 1.8.0 → 2.0.2

package/CHANGELOG.md

@@ -2,6 +2,61 @@
 
 All notable changes to this project will be documented in this file. See [standard-version](https://github.com/conventional-changelog/standard-version) for commit guidelines.
 
+### [2.0.2](https://github.com/mapequation/infomap/compare/v2.0.1...v2.0.2) (2022-01-31)
+
+
+### Bug Fixes
+
+* Change json key modularCentrality to mec ([78c7a57](https://github.com/mapequation/infomap/commit/78c7a573914e127bda03a2b8001df321e5bffd04))
+* **js:** Parse directed field in ftree files ([916f54a](https://github.com/mapequation/infomap/commit/916f54a05fb2ffd86ddf0ba297952e85ccfaa5b8))
+* **js:** Pass parseLinks to main parse function and correctly detect multilayer tree files ([0a40ca6](https://github.com/mapequation/infomap/commit/0a40ca6c1606c189f02e691a2fdb74a4494ffbe7))
+* Minify json output ([123c2b1](https://github.com/mapequation/infomap/commit/123c2b10f1e6486135346f8cd546ca0e72fb4d2e)), closes [#260](https://github.com/mapequation/infomap/issues/260)
+
+### [2.0.1](https://github.com/mapequation/infomap/compare/v2.0.0...v2.0.1) (2022-01-26)
+
+
+### Bug Fixes
+
+* Bug in write state network to json ([50f8de2](https://github.com/mapequation/infomap/commit/50f8de2008cf6422693a74279b347d043735200d)), closes [#262](https://github.com/mapequation/infomap/issues/262)
+* **js:** Broken parser due to duplicate variable name ([f437e13](https://github.com/mapequation/infomap/commit/f437e138f7b24140732831e63fac8c28e44e44bf))
+* Use min mass for dangling nodes when regularized ([f741d07](https://github.com/mapequation/infomap/commit/f741d079b04558102130cbbbd742a0ddc3c1c366))
+
+## [2.0.0](https://github.com/mapequation/infomap/compare/v1.9.0...v2.0.0) (2022-01-13)
+
+
+### ⚠ BREAKING CHANGES
+
+* Removes --input-format.
+* Removes --include-self-links.
+
+### Features
+
+* Entropy bias correction ([#258](https://github.com/mapequation/infomap/issues/258)) ([8ea235c](https://github.com/mapequation/infomap/commit/8ea235cf9159fc1a672a0470798ab7e443590fde))
+* Regularized map equation ([#181](https://github.com/mapequation/infomap/issues/181)) ([0673000](https://github.com/mapequation/infomap/commit/06730005329acb4ba781d647e7009d4ff2510ae7)), closes [#256](https://github.com/mapequation/infomap/issues/256)
+
+
+### Bug Fixes
+
+* Add new feature flags to python and js api ([48245a7](https://github.com/mapequation/infomap/commit/48245a795f87675b62b94b2f8bd8251b71e5f62e))
+* Include self links by default ([#255](https://github.com/mapequation/infomap/issues/255)) ([1f68940](https://github.com/mapequation/infomap/commit/1f68940a90633405f696efa93471ca8cbb25f14c))
+* **example:** Fix building c++ examples ([0d5c063](https://github.com/mapequation/infomap/commit/0d5c0639cb76b9b275388c1a45873496f675aeea)), closes [#252](https://github.com/mapequation/infomap/issues/252)
+
+
+* Remove superfluous --input-format flag ([2dd77c4](https://github.com/mapequation/infomap/commit/2dd77c4689c67485454478d739c22c8deb44eda0))
+
+## [1.9.0](https://github.com/mapequation/infomap/compare/v1.8.0...v1.9.0) (2021-11-17)
+
+
+### Features
+
+* **python:** Add API for intra/inter-layer links ([#245](https://github.com/mapequation/infomap/issues/245)) ([aa31ab2](https://github.com/mapequation/infomap/commit/aa31ab22ff8a706f7b1e5bbf75740d35ef5716bf)), closes [#244](https://github.com/mapequation/infomap/issues/244)
+
+
+### Bug Fixes
+
+* Incorrect one-level codelength for higher-order input ([5a6d1a1](https://github.com/mapequation/infomap/commit/5a6d1a10657c568f0fddf3afd6729a63e3543081)), closes [#182](https://github.com/mapequation/infomap/issues/182)
+* Write "directed", not "1", in cli output notice ([f0a9dc7](https://github.com/mapequation/infomap/commit/f0a9dc722f8e8d5b4ca7e9e30d201f129d210df4))
+
 ## [1.8.0](https://github.com/mapequation/infomap/compare/v1.7.3...v1.8.0) (2021-11-05)
 
 

package/arguments.d.ts

@@ -2,11 +2,10 @@ declare type OutputFormats = "clu" | "tree" | "ftree" | "newick" | "json" | "csv
 export interface Arguments extends Partial<{
     clusterData: string;
     noInfomap: boolean;
-    inputFormat: "pajek" | "link-list" | "bipartite" | "multilayer" | "states";
     skipAdjustBipartiteFlow: boolean;
     bipartiteTeleportation: boolean;
     weightThreshold: number;
-    includeSelfLinks: boolean;
+    noSelfLinks: boolean;
     nodeLimit: number;
     assignToNeighbouringModule: boolean;
     metaData: string;
@@ -28,6 +27,10 @@ export interface Arguments extends Partial<{
     useNodeWeightsAsFlow: boolean;
     toNodes: boolean;
     teleportationProbability: number;
+    regularized: boolean;
+    regularizationStrength: number;
+    entropyCorrected: boolean;
+    entropyCorrectionStrength: number;
     markovTime: number;
     preferredNumberOfModules: number;
     multilayerRelaxRate: number;

package/filetypes.d.ts

@@ -15,7 +15,7 @@ export declare type MetaClu = CluNode<"meta">[];
 export declare type TreeNode = {
     path: number[];
     modules?: number[];
-    modularCentrality?: number;
+    mec?: number;
     name?: string;
 } & NodeBase;
 export declare type TreeStateNode = TreeNode & StateNodeBase;