@manuscripts/transform 4.3.52 → 4.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/cjs/jats/__tests__/jats-roundtrip.test.js +3 -3
- package/dist/cjs/schema/types.js +18 -0
- package/dist/cjs/version.js +1 -1
- package/dist/es/jats/__tests__/jats-roundtrip.test.js +3 -3
- package/dist/es/schema/types.js +17 -0
- package/dist/es/version.js +1 -1
- package/dist/types/jats/__tests__/utils.d.ts +1 -1
- package/dist/types/schema/types.d.ts +16 -0
- package/dist/types/version.d.ts +1 -1
- package/package.json +22 -21
- package/src/errors.ts +28 -0
- package/src/getVersion.ts +21 -0
- package/src/index.ts +28 -0
- package/src/jats/__tests__/__fixtures__/debug-example.xml +136 -0
- package/src/jats/__tests__/__fixtures__/jats-abstract-no-body.xml +163 -0
- package/src/jats/__tests__/__fixtures__/jats-citations.xml +472 -0
- package/src/jats/__tests__/__fixtures__/jats-comments.xml +46 -0
- package/src/jats/__tests__/__fixtures__/jats-document.xml +134 -0
- package/src/jats/__tests__/__fixtures__/jats-example-doc.xml +1235 -0
- package/src/jats/__tests__/__fixtures__/jats-example-front-only.xml +26 -0
- package/src/jats/__tests__/__fixtures__/jats-example-full.xml +209 -0
- package/src/jats/__tests__/__fixtures__/jats-example-no-back.xml +156 -0
- package/src/jats/__tests__/__fixtures__/jats-example-no-body.xml +91 -0
- package/src/jats/__tests__/__fixtures__/jats-example.xml +221 -0
- package/src/jats/__tests__/__fixtures__/jats-fn-group.xml +60 -0
- package/src/jats/__tests__/__fixtures__/jats-import-no-refs.xml +1077 -0
- package/src/jats/__tests__/__fixtures__/jats-import.xml +1561 -0
- package/src/jats/__tests__/__fixtures__/jats-roundtrip.xml +133 -0
- package/src/jats/__tests__/__fixtures__/jats-tables-example.xml +2043 -0
- package/src/jats/__tests__/__fixtures__/math-fragment.xml +12 -0
- package/src/jats/__tests__/__snapshots__/citeproc.test.ts.snap +57 -0
- package/src/jats/__tests__/__snapshots__/create-article-node.test.ts.snap +65 -0
- package/src/jats/__tests__/__snapshots__/jats-exporter.test.ts.snap +7 -0
- package/src/jats/__tests__/__snapshots__/jats-importer.test.ts.snap +59605 -0
- package/src/jats/__tests__/__snapshots__/jats-roundtrip.test.ts.snap +18 -0
- package/src/jats/__tests__/citations.ts +25 -0
- package/src/jats/__tests__/citeproc.test.ts +195 -0
- package/src/jats/__tests__/create-article-node.test.ts +29 -0
- package/src/jats/__tests__/data/section-categories.ts +212 -0
- package/src/jats/__tests__/files.ts +24 -0
- package/src/jats/__tests__/jats-exporter.test.ts +223 -0
- package/src/jats/__tests__/jats-importer.test.ts +567 -0
- package/src/jats/__tests__/jats-roundtrip.test.ts +66 -0
- package/src/jats/__tests__/utils.ts +90 -0
- package/src/jats/exporter/citeproc.ts +265 -0
- package/src/jats/exporter/jats-exporter.ts +2090 -0
- package/src/jats/exporter/jats-versions.ts +50 -0
- package/src/jats/exporter/labels.ts +101 -0
- package/src/jats/importer/create-article-node.ts +52 -0
- package/src/jats/importer/jats-comments.ts +111 -0
- package/src/jats/importer/jats-dom-parser.ts +1260 -0
- package/src/jats/importer/jats-parser-utils.ts +234 -0
- package/src/jats/importer/jats-transformations.ts +591 -0
- package/src/jats/importer/parse-jats-article.ts +106 -0
- package/src/jats/index.ts +21 -0
- package/src/jats/types.ts +16 -0
- package/src/lib/__tests__/footnotes.test.ts +36 -0
- package/src/lib/citeproc.ts +30 -0
- package/src/lib/credit-roles.ts +91 -0
- package/src/lib/deafults.ts +17 -0
- package/src/lib/footnotes.ts +85 -0
- package/src/lib/html.ts +56 -0
- package/src/lib/section-categories.ts +27 -0
- package/src/lib/utils.ts +145 -0
- package/src/lib/xml.ts +28 -0
- package/src/schema/__tests__/docs.ts +1911 -0
- package/src/schema/__tests__/groups.test.ts +61 -0
- package/src/schema/__tests__/migration.test.ts +23 -0
- package/src/schema/groups.ts +36 -0
- package/src/schema/index.ts +286 -0
- package/src/schema/marks.ts +254 -0
- package/src/schema/migration/migrate.ts +77 -0
- package/src/schema/migration/migration-script.ts +26 -0
- package/src/schema/migration/migration-scripts/1.2.5.ts +44 -0
- package/src/schema/migration/migration-scripts/2.3.22.ts +52 -0
- package/src/schema/migration/migration-scripts/3.0.12.ts +33 -0
- package/src/schema/migration/migration-scripts/3.0.21.ts +50 -0
- package/src/schema/migration/migration-scripts/3.0.30.ts +65 -0
- package/src/schema/migration/migration-scripts/3.0.31.ts +40 -0
- package/src/schema/migration/migration-scripts/3.0.41.ts +37 -0
- package/src/schema/migration/migration-scripts/3.0.55.ts +42 -0
- package/src/schema/migration/migration-scripts/3.0.56.ts +114 -0
- package/src/schema/migration/migration-scripts/4.2.13.ts +37 -0
- package/src/schema/migration/migration-scripts/4.2.15.ts +48 -0
- package/src/schema/migration/migration-scripts/4.3.23.ts +55 -0
- package/src/schema/migration/migration-scripts/4.3.34.ts +132 -0
- package/src/schema/migration/migration-scripts/4.3.35.ts +41 -0
- package/src/schema/migration/migration-scripts/index.ts +49 -0
- package/src/schema/nodes/abstracts.ts +29 -0
- package/src/schema/nodes/affiliation.ts +88 -0
- package/src/schema/nodes/affiliations.ts +30 -0
- package/src/schema/nodes/alt_text.ts +36 -0
- package/src/schema/nodes/alt_title.ts +40 -0
- package/src/schema/nodes/alt_titles_section.ts +58 -0
- package/src/schema/nodes/attachment.ts +46 -0
- package/src/schema/nodes/attachments.ts +45 -0
- package/src/schema/nodes/attribution.ts +38 -0
- package/src/schema/nodes/author_notes.ts +44 -0
- package/src/schema/nodes/award.ts +52 -0
- package/src/schema/nodes/awards.ts +45 -0
- package/src/schema/nodes/backmatter.ts +31 -0
- package/src/schema/nodes/bibliography_element.ts +58 -0
- package/src/schema/nodes/bibliography_item.ts +108 -0
- package/src/schema/nodes/bibliography_section.ts +60 -0
- package/src/schema/nodes/blockquote_element.ts +79 -0
- package/src/schema/nodes/body.ts +29 -0
- package/src/schema/nodes/box_element.ts +67 -0
- package/src/schema/nodes/caption.ts +67 -0
- package/src/schema/nodes/caption_title.ts +67 -0
- package/src/schema/nodes/citation.ts +70 -0
- package/src/schema/nodes/comment.ts +50 -0
- package/src/schema/nodes/comments.ts +28 -0
- package/src/schema/nodes/contributor.ts +87 -0
- package/src/schema/nodes/contributors.ts +40 -0
- package/src/schema/nodes/core_section.ts +27 -0
- package/src/schema/nodes/corresp.ts +49 -0
- package/src/schema/nodes/cross_reference.ts +64 -0
- package/src/schema/nodes/doc.ts +21 -0
- package/src/schema/nodes/embed.ts +55 -0
- package/src/schema/nodes/equation.ts +65 -0
- package/src/schema/nodes/equation_element.ts +61 -0
- package/src/schema/nodes/figure.ts +65 -0
- package/src/schema/nodes/figure_element.ts +73 -0
- package/src/schema/nodes/footnote.ts +95 -0
- package/src/schema/nodes/footnotes_element.ts +69 -0
- package/src/schema/nodes/footnotes_section.ts +61 -0
- package/src/schema/nodes/general_table_footnote.ts +42 -0
- package/src/schema/nodes/graphical_abstract_section.ts +62 -0
- package/src/schema/nodes/hard_break.ts +36 -0
- package/src/schema/nodes/hero_image.ts +46 -0
- package/src/schema/nodes/highlight_marker.ts +68 -0
- package/src/schema/nodes/image_element.ts +49 -0
- package/src/schema/nodes/inline_equation.ts +68 -0
- package/src/schema/nodes/inline_footnote.ts +66 -0
- package/src/schema/nodes/keyword.ts +61 -0
- package/src/schema/nodes/keyword_group.ts +63 -0
- package/src/schema/nodes/keywords.ts +59 -0
- package/src/schema/nodes/keywords_element.ts +64 -0
- package/src/schema/nodes/link.ts +79 -0
- package/src/schema/nodes/list.ts +134 -0
- package/src/schema/nodes/listing.ts +91 -0
- package/src/schema/nodes/listing_element.ts +61 -0
- package/src/schema/nodes/long_desc.ts +36 -0
- package/src/schema/nodes/manuscript.ts +86 -0
- package/src/schema/nodes/missing_figure.ts +59 -0
- package/src/schema/nodes/paragraph.ts +77 -0
- package/src/schema/nodes/placeholder.ts +62 -0
- package/src/schema/nodes/placeholder_element.ts +60 -0
- package/src/schema/nodes/pullquote_element.ts +81 -0
- package/src/schema/nodes/quote_image.ts +64 -0
- package/src/schema/nodes/section.ts +69 -0
- package/src/schema/nodes/section_label.ts +39 -0
- package/src/schema/nodes/section_title.ts +58 -0
- package/src/schema/nodes/subtitle.ts +40 -0
- package/src/schema/nodes/subtitles.ts +51 -0
- package/src/schema/nodes/supplement.ts +77 -0
- package/src/schema/nodes/supplements.ts +60 -0
- package/src/schema/nodes/table.ts +144 -0
- package/src/schema/nodes/table_col.ts +76 -0
- package/src/schema/nodes/table_element.ts +67 -0
- package/src/schema/nodes/table_element_footer.ts +42 -0
- package/src/schema/nodes/text.ts +31 -0
- package/src/schema/nodes/title.ts +43 -0
- package/src/schema/nodes/trans_abstract.ts +58 -0
- package/src/schema/nodes/trans_graphical_abstract.ts +67 -0
- package/src/schema/types.ts +240 -0
- package/src/tests.ts +33 -0
- package/src/transformer/id.ts +23 -0
- package/src/transformer/index.ts +21 -0
- package/src/transformer/node-names.ts +73 -0
- package/src/transformer/node-title.ts +111 -0
- package/src/transformer/node-types.ts +39 -0
- package/src/transformer/node-validator.ts +82 -0
- package/src/types.ts +25 -0
- package/src/version.ts +1 -0
|
@@ -0,0 +1,67 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2019 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
interface Attrs {
|
|
22
|
+
placeholder: string
|
|
23
|
+
}
|
|
24
|
+
|
|
25
|
+
export interface CaptionTitleNode extends ManuscriptNode {
|
|
26
|
+
attrs: Attrs
|
|
27
|
+
}
|
|
28
|
+
|
|
29
|
+
export const captionTitle: NodeSpec = {
|
|
30
|
+
content: 'inline*',
|
|
31
|
+
group: 'block',
|
|
32
|
+
selectable: false,
|
|
33
|
+
isolating: true,
|
|
34
|
+
attrs: {
|
|
35
|
+
placeholder: { default: 'Title...' },
|
|
36
|
+
dataTracked: { default: null },
|
|
37
|
+
},
|
|
38
|
+
parseDOM: [
|
|
39
|
+
{
|
|
40
|
+
tag: 'label',
|
|
41
|
+
getAttrs: (node) => {
|
|
42
|
+
const dom = node as HTMLSpanElement
|
|
43
|
+
|
|
44
|
+
return {
|
|
45
|
+
placeholder: dom.getAttribute('data-placeholder-text'),
|
|
46
|
+
}
|
|
47
|
+
},
|
|
48
|
+
},
|
|
49
|
+
],
|
|
50
|
+
toDOM: (node) => {
|
|
51
|
+
const captionTitleNode = node as CaptionTitleNode
|
|
52
|
+
|
|
53
|
+
const attrs: { [key: string]: string } = {}
|
|
54
|
+
|
|
55
|
+
attrs.class = 'caption-title'
|
|
56
|
+
|
|
57
|
+
if (captionTitleNode.attrs.placeholder) {
|
|
58
|
+
attrs['data-placeholder-text'] = captionTitleNode.attrs.placeholder
|
|
59
|
+
}
|
|
60
|
+
|
|
61
|
+
if (!captionTitleNode.textContent) {
|
|
62
|
+
attrs.class = `${attrs.class} placeholder`
|
|
63
|
+
}
|
|
64
|
+
|
|
65
|
+
return ['label', attrs, 0]
|
|
66
|
+
},
|
|
67
|
+
}
|
|
@@ -0,0 +1,70 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2019 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
export interface CitationAttrs {
|
|
22
|
+
id: string
|
|
23
|
+
rids: string[]
|
|
24
|
+
selectedText?: string
|
|
25
|
+
}
|
|
26
|
+
|
|
27
|
+
export interface CitationNode extends ManuscriptNode {
|
|
28
|
+
attrs: CitationAttrs
|
|
29
|
+
}
|
|
30
|
+
|
|
31
|
+
export const citation: NodeSpec = {
|
|
32
|
+
inline: true,
|
|
33
|
+
group: 'inline',
|
|
34
|
+
draggable: true,
|
|
35
|
+
atom: true,
|
|
36
|
+
attrs: {
|
|
37
|
+
id: { default: '' },
|
|
38
|
+
rids: { default: [] },
|
|
39
|
+
selectedText: { default: '' },
|
|
40
|
+
dataTracked: { default: null },
|
|
41
|
+
},
|
|
42
|
+
parseDOM: [
|
|
43
|
+
{
|
|
44
|
+
tag: 'span.citation[data-reference-id]',
|
|
45
|
+
getAttrs: (p) => {
|
|
46
|
+
const dom = p as HTMLSpanElement
|
|
47
|
+
|
|
48
|
+
return {
|
|
49
|
+
id: dom.getAttribute('data-id'),
|
|
50
|
+
rids: dom.getAttribute('data-reference-id')?.split(/\s+/) || [],
|
|
51
|
+
}
|
|
52
|
+
},
|
|
53
|
+
},
|
|
54
|
+
],
|
|
55
|
+
toDOM: (node) => {
|
|
56
|
+
const citation = node as CitationNode
|
|
57
|
+
|
|
58
|
+
const dom = document.createElement('span')
|
|
59
|
+
dom.className = 'citation'
|
|
60
|
+
dom.setAttribute('data-id', citation.attrs.id)
|
|
61
|
+
dom.setAttribute('data-reference-id', citation.attrs.rids.join(' '))
|
|
62
|
+
|
|
63
|
+
dom.innerHTML = node.attrs.contents
|
|
64
|
+
|
|
65
|
+
return dom
|
|
66
|
+
},
|
|
67
|
+
}
|
|
68
|
+
|
|
69
|
+
export const isCitationNode = (node: ManuscriptNode): node is CitationNode =>
|
|
70
|
+
node.type === node.type.schema.nodes.citation
|
|
@@ -0,0 +1,50 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2019 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
export interface CommentAttrs {
|
|
22
|
+
id: string
|
|
23
|
+
contents: string
|
|
24
|
+
target: string
|
|
25
|
+
selector: { from: number; to: number }
|
|
26
|
+
resolved?: boolean
|
|
27
|
+
userID: string
|
|
28
|
+
timestamp: number
|
|
29
|
+
originalText?: string
|
|
30
|
+
}
|
|
31
|
+
|
|
32
|
+
export interface CommentNode extends ManuscriptNode {
|
|
33
|
+
attrs: CommentAttrs
|
|
34
|
+
}
|
|
35
|
+
|
|
36
|
+
export const comment: NodeSpec = {
|
|
37
|
+
attrs: {
|
|
38
|
+
id: { default: '' },
|
|
39
|
+
contents: { default: '' },
|
|
40
|
+
target: { default: '' },
|
|
41
|
+
selector: { default: undefined },
|
|
42
|
+
resolved: { default: false },
|
|
43
|
+
userID: { default: '' },
|
|
44
|
+
timestamp: { default: 0 },
|
|
45
|
+
originalText: { default: '' },
|
|
46
|
+
},
|
|
47
|
+
}
|
|
48
|
+
|
|
49
|
+
export const isCommentNode = (node: ManuscriptNode): node is CommentNode =>
|
|
50
|
+
node.type === node.type.schema.nodes.comment
|
|
@@ -0,0 +1,28 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2019 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
// This node has no representation in json-schema
|
|
20
|
+
// It exists for the purpose of styling in the UI
|
|
21
|
+
|
|
22
|
+
export const comments: NodeSpec = {
|
|
23
|
+
content: 'comment*',
|
|
24
|
+
attrs: {
|
|
25
|
+
id: { default: '' },
|
|
26
|
+
},
|
|
27
|
+
toDOM: () => ['div', { class: 'comments' }, 0],
|
|
28
|
+
}
|
|
@@ -0,0 +1,87 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2023 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
17
|
+
|
|
18
|
+
import { CreditVocabTerm } from '../../lib/credit-roles'
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
export type CreditRole = {
|
|
22
|
+
vocabTerm: CreditVocabTerm
|
|
23
|
+
}
|
|
24
|
+
|
|
25
|
+
export interface ContributorAttrs {
|
|
26
|
+
id: string
|
|
27
|
+
role: string
|
|
28
|
+
correspIDs: string[]
|
|
29
|
+
affiliationIDs: string[]
|
|
30
|
+
footnoteIDs: string[]
|
|
31
|
+
given?: string
|
|
32
|
+
family?: string
|
|
33
|
+
prefix?: string
|
|
34
|
+
suffix?: string
|
|
35
|
+
email?: string
|
|
36
|
+
ORCID?: string
|
|
37
|
+
degrees: string[]
|
|
38
|
+
isAuthenticated?: boolean
|
|
39
|
+
isCorresponding: boolean
|
|
40
|
+
priority: number
|
|
41
|
+
isJointContributor: boolean
|
|
42
|
+
creditRoles?: CreditRole[]
|
|
43
|
+
}
|
|
44
|
+
|
|
45
|
+
export interface ContributorNode extends ManuscriptNode {
|
|
46
|
+
attrs: ContributorAttrs
|
|
47
|
+
}
|
|
48
|
+
|
|
49
|
+
export const contributor: NodeSpec = {
|
|
50
|
+
content: 'inline*',
|
|
51
|
+
atom: true,
|
|
52
|
+
attrs: {
|
|
53
|
+
id: { default: '' },
|
|
54
|
+
role: { default: '' },
|
|
55
|
+
correspIDs: { default: [] },
|
|
56
|
+
affiliationIDs: { default: [] },
|
|
57
|
+
footnoteIDs: { default: [] },
|
|
58
|
+
given: { default: undefined },
|
|
59
|
+
family: { default: undefined },
|
|
60
|
+
prefix: { default: undefined },
|
|
61
|
+
suffix: { default: undefined },
|
|
62
|
+
degrees: { default: [] },
|
|
63
|
+
email: { default: undefined },
|
|
64
|
+
ORCID: { default: undefined },
|
|
65
|
+
isAuthenticated: { default: false },
|
|
66
|
+
isCorresponding: { default: false },
|
|
67
|
+
isJointContributor: { default: false },
|
|
68
|
+
priority: { default: undefined },
|
|
69
|
+
creditRoles: { default: [] },
|
|
70
|
+
dataTracked: { default: null },
|
|
71
|
+
contents: { default: '' },
|
|
72
|
+
},
|
|
73
|
+
group: 'block',
|
|
74
|
+
toDOM: (node) => {
|
|
75
|
+
const contributorNode = node as ContributorNode
|
|
76
|
+
return [
|
|
77
|
+
'div',
|
|
78
|
+
{
|
|
79
|
+
class: 'contributor',
|
|
80
|
+
id: contributorNode.attrs.id,
|
|
81
|
+
},
|
|
82
|
+
]
|
|
83
|
+
},
|
|
84
|
+
}
|
|
85
|
+
export const isContributorNode = (
|
|
86
|
+
node: ManuscriptNode
|
|
87
|
+
): node is ContributorNode => node.type === node.type.schema.nodes.contributor
|
|
@@ -0,0 +1,40 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2023 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
// This node has no representation in json-schema
|
|
22
|
+
// It exists for the purpose of styling in the UI
|
|
23
|
+
|
|
24
|
+
interface Attrs {
|
|
25
|
+
id: string
|
|
26
|
+
}
|
|
27
|
+
|
|
28
|
+
export interface ContributorsNode extends ManuscriptNode {
|
|
29
|
+
attrs: Attrs
|
|
30
|
+
}
|
|
31
|
+
|
|
32
|
+
export const contributors: NodeSpec = {
|
|
33
|
+
content: 'contributor*',
|
|
34
|
+
attrs: {
|
|
35
|
+
id: { default: '' },
|
|
36
|
+
},
|
|
37
|
+
group: 'block',
|
|
38
|
+
selectable: false,
|
|
39
|
+
toDOM: () => ['div', { class: 'contributors' }, 0],
|
|
40
|
+
}
|
|
@@ -0,0 +1,27 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2019 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
export const coreSection: NodeSpec = {
|
|
20
|
+
content: 'sections*',
|
|
21
|
+
atom: true,
|
|
22
|
+
attrs: {
|
|
23
|
+
id: { default: '' },
|
|
24
|
+
},
|
|
25
|
+
group: 'block',
|
|
26
|
+
toDOM: () => ['section', 0],
|
|
27
|
+
}
|
|
@@ -0,0 +1,49 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2024 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
17
|
+
|
|
18
|
+
import { ManuscriptNode } from '../types'
|
|
19
|
+
|
|
20
|
+
interface Attrs {
|
|
21
|
+
id: string
|
|
22
|
+
label?: string
|
|
23
|
+
}
|
|
24
|
+
|
|
25
|
+
export interface CorrespNode extends ManuscriptNode {
|
|
26
|
+
attrs: Attrs
|
|
27
|
+
}
|
|
28
|
+
|
|
29
|
+
export const corresp: NodeSpec = {
|
|
30
|
+
content: 'inline*',
|
|
31
|
+
attrs: {
|
|
32
|
+
id: { default: '' },
|
|
33
|
+
label: { default: undefined },
|
|
34
|
+
dataTracked: { default: null },
|
|
35
|
+
},
|
|
36
|
+
group: 'block',
|
|
37
|
+
toDOM: (node) => {
|
|
38
|
+
return [
|
|
39
|
+
'div',
|
|
40
|
+
{
|
|
41
|
+
class: 'corresp',
|
|
42
|
+
id: node.attrs.id,
|
|
43
|
+
},
|
|
44
|
+
0,
|
|
45
|
+
]
|
|
46
|
+
},
|
|
47
|
+
}
|
|
48
|
+
export const isCorrespNode = (node: ManuscriptNode): node is CorrespNode =>
|
|
49
|
+
node.type === node.type.schema.nodes.corresp
|
|
@@ -0,0 +1,64 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2019 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
interface Attrs {
|
|
22
|
+
rids: string[]
|
|
23
|
+
label: string
|
|
24
|
+
}
|
|
25
|
+
|
|
26
|
+
export interface CrossReferenceNode extends ManuscriptNode {
|
|
27
|
+
attrs: Attrs
|
|
28
|
+
}
|
|
29
|
+
|
|
30
|
+
export const crossReference: NodeSpec = {
|
|
31
|
+
inline: true,
|
|
32
|
+
group: 'inline',
|
|
33
|
+
draggable: true,
|
|
34
|
+
atom: true,
|
|
35
|
+
attrs: {
|
|
36
|
+
rids: { default: [] },
|
|
37
|
+
label: { default: '' },
|
|
38
|
+
dataTracked: { default: null },
|
|
39
|
+
},
|
|
40
|
+
parseDOM: [
|
|
41
|
+
{
|
|
42
|
+
tag: 'span.cross-reference',
|
|
43
|
+
getAttrs: (p) => {
|
|
44
|
+
const dom = p as HTMLSpanElement
|
|
45
|
+
|
|
46
|
+
return {
|
|
47
|
+
rids: dom.getAttribute('data-reference-id')?.split(/\s+/) || [],
|
|
48
|
+
}
|
|
49
|
+
},
|
|
50
|
+
},
|
|
51
|
+
],
|
|
52
|
+
toDOM: (node) => {
|
|
53
|
+
const crossReferenceNode = node as CrossReferenceNode
|
|
54
|
+
|
|
55
|
+
return [
|
|
56
|
+
'span',
|
|
57
|
+
{
|
|
58
|
+
class: 'cross-reference',
|
|
59
|
+
'data-reference-id': crossReferenceNode.attrs.rids.join(' '),
|
|
60
|
+
},
|
|
61
|
+
crossReferenceNode.attrs.label,
|
|
62
|
+
]
|
|
63
|
+
},
|
|
64
|
+
}
|
|
@@ -0,0 +1,21 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2019 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
export const doc: NodeSpec = {
|
|
20
|
+
content: 'manuscript',
|
|
21
|
+
}
|
|
@@ -0,0 +1,55 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2024 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
export interface EmbedAttrs {
|
|
22
|
+
id: string
|
|
23
|
+
href: string
|
|
24
|
+
mimetype: string
|
|
25
|
+
mimeSubtype: string
|
|
26
|
+
}
|
|
27
|
+
|
|
28
|
+
export interface EmbedNode extends ManuscriptNode {
|
|
29
|
+
attrs: EmbedAttrs
|
|
30
|
+
}
|
|
31
|
+
|
|
32
|
+
export const embed: NodeSpec = {
|
|
33
|
+
content: 'caption_title caption alt_text long_desc',
|
|
34
|
+
attrs: {
|
|
35
|
+
id: { default: '' },
|
|
36
|
+
dataTracked: { default: null },
|
|
37
|
+
href: { default: undefined },
|
|
38
|
+
mimetype: { default: undefined },
|
|
39
|
+
mimeSubtype: { default: undefined },
|
|
40
|
+
longDesc: { default: '' },
|
|
41
|
+
},
|
|
42
|
+
group: 'block element',
|
|
43
|
+
toDOM: (node) => {
|
|
44
|
+
return [
|
|
45
|
+
'div',
|
|
46
|
+
{
|
|
47
|
+
class: 'embed',
|
|
48
|
+
id: node.attrs.id,
|
|
49
|
+
},
|
|
50
|
+
]
|
|
51
|
+
},
|
|
52
|
+
}
|
|
53
|
+
|
|
54
|
+
export const isEmbedNode = (node: ManuscriptNode): node is EmbedNode =>
|
|
55
|
+
node.type === node.type.schema.nodes.embed
|
|
@@ -0,0 +1,65 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2023 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
interface Attrs {
|
|
22
|
+
id: string
|
|
23
|
+
format: string
|
|
24
|
+
contents: string
|
|
25
|
+
}
|
|
26
|
+
|
|
27
|
+
export interface EquationNode extends ManuscriptNode {
|
|
28
|
+
attrs: Attrs
|
|
29
|
+
}
|
|
30
|
+
|
|
31
|
+
export const equation: NodeSpec = {
|
|
32
|
+
attrs: {
|
|
33
|
+
id: { default: '' },
|
|
34
|
+
contents: { default: '' },
|
|
35
|
+
format: { default: '' },
|
|
36
|
+
dataTracked: { default: null },
|
|
37
|
+
},
|
|
38
|
+
group: 'block',
|
|
39
|
+
parseDOM: [
|
|
40
|
+
{
|
|
41
|
+
tag: `div.MPEquation`,
|
|
42
|
+
getAttrs: (p) => {
|
|
43
|
+
const htmlEl = p as HTMLElement
|
|
44
|
+
return {
|
|
45
|
+
id: htmlEl.getAttribute('id'),
|
|
46
|
+
format: htmlEl.getAttribute('data-equation-format'),
|
|
47
|
+
contents: htmlEl.innerHTML,
|
|
48
|
+
}
|
|
49
|
+
},
|
|
50
|
+
},
|
|
51
|
+
],
|
|
52
|
+
toDOM: (node: ManuscriptNode) => {
|
|
53
|
+
const equationNode = node as EquationNode
|
|
54
|
+
const { id, contents, format } = equationNode.attrs
|
|
55
|
+
|
|
56
|
+
const dom = document.createElement('div')
|
|
57
|
+
dom.setAttribute('id', id)
|
|
58
|
+
if (format) {
|
|
59
|
+
dom.setAttribute('data-equation-format', format)
|
|
60
|
+
}
|
|
61
|
+
dom.innerHTML = contents
|
|
62
|
+
|
|
63
|
+
return dom
|
|
64
|
+
},
|
|
65
|
+
}
|
|
@@ -0,0 +1,61 @@
|
|
|
1
|
+
/*!
|
|
2
|
+
* © 2019 Atypon Systems LLC
|
|
3
|
+
*
|
|
4
|
+
* Licensed under the Apache License, Version 2.0 (the "License");
|
|
5
|
+
* you may not use this file except in compliance with the License.
|
|
6
|
+
* You may obtain a copy of the License at
|
|
7
|
+
*
|
|
8
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
|
9
|
+
*
|
|
10
|
+
* Unless required by applicable law or agreed to in writing, software
|
|
11
|
+
* distributed under the License is distributed on an "AS IS" BASIS,
|
|
12
|
+
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
13
|
+
* See the License for the specific language governing permissions and
|
|
14
|
+
* limitations under the License.
|
|
15
|
+
*/
|
|
16
|
+
|
|
17
|
+
import { NodeSpec } from 'prosemirror-model'
|
|
18
|
+
|
|
19
|
+
import { ManuscriptNode } from '../types'
|
|
20
|
+
|
|
21
|
+
interface Attrs {
|
|
22
|
+
id: string
|
|
23
|
+
}
|
|
24
|
+
|
|
25
|
+
export interface EquationElementNode extends ManuscriptNode {
|
|
26
|
+
attrs: Attrs
|
|
27
|
+
}
|
|
28
|
+
|
|
29
|
+
export const equationElement: NodeSpec = {
|
|
30
|
+
content: '(equation | placeholder)',
|
|
31
|
+
attrs: {
|
|
32
|
+
id: { default: '' },
|
|
33
|
+
dataTracked: { default: null },
|
|
34
|
+
},
|
|
35
|
+
selectable: false,
|
|
36
|
+
group: 'block element',
|
|
37
|
+
parseDOM: [
|
|
38
|
+
{
|
|
39
|
+
tag: 'div.equation',
|
|
40
|
+
getAttrs: (p) => {
|
|
41
|
+
const dom = p as HTMLElement
|
|
42
|
+
|
|
43
|
+
return {
|
|
44
|
+
id: dom.getAttribute('id'),
|
|
45
|
+
}
|
|
46
|
+
},
|
|
47
|
+
},
|
|
48
|
+
],
|
|
49
|
+
toDOM: (node) => {
|
|
50
|
+
const equationElementNode = node as EquationElementNode
|
|
51
|
+
|
|
52
|
+
return [
|
|
53
|
+
'div',
|
|
54
|
+
{
|
|
55
|
+
class: 'equation',
|
|
56
|
+
id: equationElementNode.attrs.id,
|
|
57
|
+
},
|
|
58
|
+
0,
|
|
59
|
+
]
|
|
60
|
+
},
|
|
61
|
+
}
|