@manuscripts/transform 4.0.1 → 4.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/cjs/index.js +3 -1
- package/dist/cjs/jats/exporter/jats-exporter.js +3 -3
- package/dist/cjs/jats/importer/jats-dom-parser.js +1 -1
- package/dist/cjs/lib/credit-roles.js +33 -16
- package/dist/cjs/lib/utils.js +4 -4
- package/dist/cjs/schema/nodes/contributor.js +1 -1
- package/dist/cjs/version.js +1 -1
- package/dist/es/index.js +1 -0
- package/dist/es/jats/exporter/jats-exporter.js +4 -4
- package/dist/es/jats/importer/jats-dom-parser.js +2 -2
- package/dist/es/lib/credit-roles.js +32 -15
- package/dist/es/lib/utils.js +3 -3
- package/dist/es/schema/nodes/contributor.js +1 -1
- package/dist/es/version.js +1 -1
- package/dist/types/index.d.ts +1 -0
- package/dist/types/lib/credit-roles.d.ts +3 -3
- package/dist/types/lib/utils.d.ts +2 -2
- package/dist/types/schema/nodes/affiliation.d.ts +1 -1
- package/dist/types/schema/nodes/contributor.d.ts +2 -3
- package/dist/types/version.d.ts +1 -1
- package/package.json +1 -1
package/dist/cjs/index.js
CHANGED
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@@ -14,7 +14,7 @@ var __exportStar = (this && this.__exportStar) || function(m, exports) {
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for (var p in m) if (p !== "default" && !Object.prototype.hasOwnProperty.call(exports, p)) __createBinding(exports, m, p);
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.migrateFor = exports.getVersion = void 0;
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exports.migrateFor = exports.CreditVocabTerm = exports.getVersion = void 0;
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__exportStar(require("./errors"), exports);
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var getVersion_1 = require("./getVersion");
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Object.defineProperty(exports, "getVersion", { enumerable: true, get: function () { return getVersion_1.getVersion; } });
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@@ -23,6 +23,8 @@ __exportStar(require("./jats/types"), exports);
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__exportStar(require("./lib/footnotes"), exports);
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__exportStar(require("./lib/utils"), exports);
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__exportStar(require("./lib/section-categories"), exports);
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var credit_roles_1 = require("./lib/credit-roles");
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Object.defineProperty(exports, "CreditVocabTerm", { enumerable: true, get: function () { return credit_roles_1.CreditVocabTerm; } });
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__exportStar(require("./lib/citeproc"), exports);
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__exportStar(require("./schema"), exports);
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var migrate_1 = require("./schema/migration/migrate");
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@@ -1057,10 +1057,10 @@ class JATSExporter {
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contrib.appendChild(xref);
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});
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}
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if (contributor.attrs.
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contributor.attrs.
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if (contributor.attrs.creditRoles) {
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contributor.attrs.creditRoles.forEach((cr) => {
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const role = this.createElement('role');
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const creditUrl = credit_roles_1.
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const creditUrl = credit_roles_1.CreditRoleUrls.get(cr.vocabTerm);
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if (creditUrl) {
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role.setAttribute('vocab-identifier', 'http://credit.niso.org/');
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role.setAttribute('vocab', 'CRediT');
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@@ -414,7 +414,7 @@ class JATSDOMParser {
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ObjectType: json_schema_1.ObjectTypes.BibliographicName,
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},
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ORCIDIdentifier: (0, utils_1.getTrimmedTextContent)(element, 'contrib-id[contrib-id-type="orcid"]'),
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creditRoles: (0, utils_1.getCreditRole)(element),
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priority: this.parsePriority(element.getAttribute('priority')),
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email: (0, utils_1.getTrimmedTextContent)(element, 'email') || '',
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prefix: (0, utils_1.getTrimmedTextContent)(element, 'prefix'),
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@@ -15,62 +15,79 @@
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* limitations under the License.
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.
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exports.CreditRoleUrls = exports.CreditVocabTerm = void 0;
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var CreditVocabTerm;
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(function (CreditVocabTerm) {
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CreditVocabTerm["Conceptualization"] = "Conceptualization";
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CreditVocabTerm["DataCuration"] = "Data curation";
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CreditVocabTerm["FormalAnalysis"] = "Formal analysis";
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CreditVocabTerm["FundingAcquisition"] = "Funding acquisition";
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CreditVocabTerm["Investigation"] = "Investigation";
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CreditVocabTerm["Methodology"] = "Methodology";
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CreditVocabTerm["ProjectAdministration"] = "Project administration";
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CreditVocabTerm["Resources"] = "Resources";
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CreditVocabTerm["Software"] = "Software";
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CreditVocabTerm["Supervision"] = "Supervision";
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CreditVocabTerm["Validation"] = "Validation";
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CreditVocabTerm["Visualization"] = "Visualization";
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CreditVocabTerm["WritingOriginalDraft"] = "Writing \u2013 original draft";
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CreditVocabTerm["WritingReviewEditing"] = "Writing \u2013 review & editing";
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})(CreditVocabTerm = exports.CreditVocabTerm || (exports.CreditVocabTerm = {}));
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exports.CreditRoleUrls = new Map([
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[
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CreditVocabTerm.Conceptualization,
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'https://credit.niso.org/contributor-roles/conceptualization/',
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],
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[
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CreditVocabTerm.DataCuration,
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'https://credit.niso.org/contributor-roles/data-curation/',
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],
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[
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CreditVocabTerm.FormalAnalysis,
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'https://credit.niso.org/contributor-roles/formal-analysis/',
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],
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[
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CreditVocabTerm.FundingAcquisition,
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'https://credit.niso.org/contributor-roles/funding-acquisition/',
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],
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[
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CreditVocabTerm.Investigation,
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'https://credit.niso.org/contributor-roles/investigation/',
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],
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[
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CreditVocabTerm.Methodology,
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'https://credit.niso.org/contributor-roles/methodology/',
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],
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[
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CreditVocabTerm.ProjectAdministration,
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'https://credit.niso.org/contributor-roles/project-administration/',
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],
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[
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CreditVocabTerm.Resources,
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'https://credit.niso.org/contributor-roles/resources/',
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],
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[
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CreditVocabTerm.Software,
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'https://credit.niso.org/contributor-roles/software/',
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],
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[
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CreditVocabTerm.Supervision,
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'https://credit.niso.org/contributor-roles/supervision/',
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],
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[
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CreditVocabTerm.Validation,
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'https://credit.niso.org/contributor-roles/validation/',
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],
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CreditVocabTerm.Visualization,
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'https://credit.niso.org/contributor-roles/visualization/',
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],
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[
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CreditVocabTerm.WritingOriginalDraft,
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'https://credit.niso.org/contributor-roles/writing-original-draft/',
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],
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CreditVocabTerm.WritingReviewEditing,
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'https://credit.niso.org/contributor-roles/writing-review-editing/',
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],
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]);
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package/dist/cjs/lib/utils.js
CHANGED
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* limitations under the License.
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.
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exports.getCreditRole = exports.dateToTimestamp = exports.getHTMLContent = exports.getTrimmedTextContent = exports.findParentNodeClosestToPos = exports.isInBibliographySection = exports.isInGraphicalAbstractSection = exports.findNodePositions = exports.iterateChildren = void 0;
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const jats_parser_utils_1 = require("../jats/importer/jats-parser-utils");
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const schema_1 = require("../schema");
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const credit_roles_1 = require("./credit-roles");
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@@ -102,12 +102,12 @@ const dateToTimestamp = (dateElement) => {
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return Date.UTC(values[0], values[1] - 1, values[2]) / 1000;
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};
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exports.dateToTimestamp = dateToTimestamp;
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function
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function getCreditRole(elem) {
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const sources = elem.querySelectorAll('role[vocab="CRediT"][vocab-identifier="http://credit.niso.org/"][vocab-term][vocab-term-identifier]');
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const results = [];
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sources.forEach((source) => {
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if (source &&
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credit_roles_1.
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credit_roles_1.CreditRoleUrls.has(source.getAttribute('vocab-term'))) {
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const result = {
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vocabTerm: source.getAttribute('vocab-term'),
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};
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});
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return results;
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}
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exports.
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exports.getCreditRole = getCreditRole;
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isJointContributor: { default: undefined },
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ORCIDIdentifier: { default: undefined },
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priority: { default: undefined },
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creditRoles: { default: [] },
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dataTracked: { default: null },
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contents: { default: '' },
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prefix: { default: '' },
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package/dist/cjs/version.js
CHANGED
package/dist/es/index.js
CHANGED
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export * from './lib/footnotes';
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export * from './lib/utils';
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export * from './lib/section-categories';
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export { CreditVocabTerm } from './lib/credit-roles';
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export * from './lib/citeproc';
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export * from './schema';
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export { migrateFor } from './schema/migration/migrate';
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import { findChildrenByAttr, findChildrenByType } from 'prosemirror-utils';
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import serializeToXML from 'w3c-xmlserializer';
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import { buildCiteprocCitation } from '../../lib/citeproc';
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import {
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import { CreditRoleUrls } from '../../lib/credit-roles';
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import { generateFootnoteLabels } from '../../lib/footnotes';
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import { nodeFromHTML } from '../../lib/html';
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import { isBibliographyItemNode, isCitationNode, isNodeOfType, schema, } from '../../schema';
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contrib.appendChild(xref);
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});
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}
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if (contributor.attrs.
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contributor.attrs.
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if (contributor.attrs.creditRoles) {
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contributor.attrs.creditRoles.forEach((cr) => {
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const role = this.createElement('role');
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const creditUrl =
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const creditUrl = CreditRoleUrls.get(cr.vocabTerm);
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if (creditUrl) {
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role.setAttribute('vocab-identifier', 'http://credit.niso.org/');
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role.setAttribute('vocab', 'CRediT');
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*/
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import { buildContribution, ObjectTypes } from '@manuscripts/json-schema';
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import { DOMParser, Fragment } from 'prosemirror-model';
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import { dateToTimestamp,
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import { dateToTimestamp, getCreditRole, getHTMLContent, getTrimmedTextContent, } from '../../lib/utils';
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import { DEFAULT_PROFILE_ID } from './jats-comments';
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export class JATSDOMParser {
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constructor(sectionCategories, schema) {
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ObjectType: ObjectTypes.BibliographicName,
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},
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ORCIDIdentifier: getTrimmedTextContent(element, 'contrib-id[contrib-id-type="orcid"]'),
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creditRoles: getCreditRole(element),
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priority: this.parsePriority(element.getAttribute('priority')),
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email: getTrimmedTextContent(element, 'email') || '',
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prefix: getTrimmedTextContent(element, 'prefix'),
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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export
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export var CreditVocabTerm;
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(function (CreditVocabTerm) {
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CreditVocabTerm["Conceptualization"] = "Conceptualization";
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CreditVocabTerm["DataCuration"] = "Data curation";
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CreditVocabTerm["FormalAnalysis"] = "Formal analysis";
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CreditVocabTerm["FundingAcquisition"] = "Funding acquisition";
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CreditVocabTerm["Investigation"] = "Investigation";
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CreditVocabTerm["Methodology"] = "Methodology";
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CreditVocabTerm["ProjectAdministration"] = "Project administration";
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CreditVocabTerm["Resources"] = "Resources";
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CreditVocabTerm["Software"] = "Software";
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CreditVocabTerm["Supervision"] = "Supervision";
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CreditVocabTerm["Validation"] = "Validation";
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CreditVocabTerm["Visualization"] = "Visualization";
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CreditVocabTerm["WritingOriginalDraft"] = "Writing \u2013 original draft";
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CreditVocabTerm["WritingReviewEditing"] = "Writing \u2013 review & editing";
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})(CreditVocabTerm || (CreditVocabTerm = {}));
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export const CreditRoleUrls = new Map([
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[
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CreditVocabTerm.Conceptualization,
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'https://credit.niso.org/contributor-roles/conceptualization/',
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],
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[
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CreditVocabTerm.DataCuration,
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'https://credit.niso.org/contributor-roles/data-curation/',
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],
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[
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CreditVocabTerm.FormalAnalysis,
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'https://credit.niso.org/contributor-roles/formal-analysis/',
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[
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CreditVocabTerm.FundingAcquisition,
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'https://credit.niso.org/contributor-roles/funding-acquisition/',
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[
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CreditVocabTerm.Investigation,
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'https://credit.niso.org/contributor-roles/investigation/',
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],
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[
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CreditVocabTerm.Methodology,
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'https://credit.niso.org/contributor-roles/methodology/',
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58
|
[
|
|
42
|
-
|
|
59
|
+
CreditVocabTerm.ProjectAdministration,
|
|
43
60
|
'https://credit.niso.org/contributor-roles/project-administration/',
|
|
44
61
|
],
|
|
45
62
|
[
|
|
46
|
-
|
|
63
|
+
CreditVocabTerm.Resources,
|
|
47
64
|
'https://credit.niso.org/contributor-roles/resources/',
|
|
48
65
|
],
|
|
49
66
|
[
|
|
50
|
-
|
|
67
|
+
CreditVocabTerm.Software,
|
|
51
68
|
'https://credit.niso.org/contributor-roles/software/',
|
|
52
69
|
],
|
|
53
70
|
[
|
|
54
|
-
|
|
71
|
+
CreditVocabTerm.Supervision,
|
|
55
72
|
'https://credit.niso.org/contributor-roles/supervision/',
|
|
56
73
|
],
|
|
57
74
|
[
|
|
58
|
-
|
|
75
|
+
CreditVocabTerm.Validation,
|
|
59
76
|
'https://credit.niso.org/contributor-roles/validation/',
|
|
60
77
|
],
|
|
61
78
|
[
|
|
62
|
-
|
|
79
|
+
CreditVocabTerm.Visualization,
|
|
63
80
|
'https://credit.niso.org/contributor-roles/visualization/',
|
|
64
81
|
],
|
|
65
82
|
[
|
|
66
|
-
|
|
83
|
+
CreditVocabTerm.WritingOriginalDraft,
|
|
67
84
|
'https://credit.niso.org/contributor-roles/writing-original-draft/',
|
|
68
85
|
],
|
|
69
86
|
[
|
|
70
|
-
|
|
87
|
+
CreditVocabTerm.WritingReviewEditing,
|
|
71
88
|
'https://credit.niso.org/contributor-roles/writing-review-editing/',
|
|
72
89
|
],
|
|
73
90
|
]);
|
package/dist/es/lib/utils.js
CHANGED
|
@@ -15,7 +15,7 @@
|
|
|
15
15
|
*/
|
|
16
16
|
import { htmlFromJatsNode } from '../jats/importer/jats-parser-utils';
|
|
17
17
|
import { isBibliographySectionNode, isGraphicalAbstractSectionNode, } from '../schema';
|
|
18
|
-
import {
|
|
18
|
+
import { CreditRoleUrls } from './credit-roles';
|
|
19
19
|
export function* iterateChildren(node, recurse = false) {
|
|
20
20
|
for (let i = 0; i < node.childCount; i++) {
|
|
21
21
|
const child = node.child(i);
|
|
@@ -91,12 +91,12 @@ export const dateToTimestamp = (dateElement) => {
|
|
|
91
91
|
}
|
|
92
92
|
return Date.UTC(values[0], values[1] - 1, values[2]) / 1000;
|
|
93
93
|
};
|
|
94
|
-
export function
|
|
94
|
+
export function getCreditRole(elem) {
|
|
95
95
|
const sources = elem.querySelectorAll('role[vocab="CRediT"][vocab-identifier="http://credit.niso.org/"][vocab-term][vocab-term-identifier]');
|
|
96
96
|
const results = [];
|
|
97
97
|
sources.forEach((source) => {
|
|
98
98
|
if (source &&
|
|
99
|
-
|
|
99
|
+
CreditRoleUrls.has(source.getAttribute('vocab-term'))) {
|
|
100
100
|
const result = {
|
|
101
101
|
vocabTerm: source.getAttribute('vocab-term'),
|
|
102
102
|
};
|
|
@@ -14,7 +14,7 @@ export const contributor = {
|
|
|
14
14
|
isJointContributor: { default: undefined },
|
|
15
15
|
ORCIDIdentifier: { default: undefined },
|
|
16
16
|
priority: { default: undefined },
|
|
17
|
-
|
|
17
|
+
creditRoles: { default: [] },
|
|
18
18
|
dataTracked: { default: null },
|
|
19
19
|
contents: { default: '' },
|
|
20
20
|
prefix: { default: '' },
|
package/dist/es/version.js
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
export const VERSION = "4.0
|
|
1
|
+
export const VERSION = "4.1.0";
|
package/dist/types/index.d.ts
CHANGED
|
@@ -5,6 +5,7 @@ export * from './jats/types';
|
|
|
5
5
|
export * from './lib/footnotes';
|
|
6
6
|
export * from './lib/utils';
|
|
7
7
|
export * from './lib/section-categories';
|
|
8
|
+
export { CreditVocabTerm } from './lib/credit-roles';
|
|
8
9
|
export * from './lib/citeproc';
|
|
9
10
|
export * from './schema';
|
|
10
11
|
export { migrateFor } from './schema/migration/migrate';
|
|
@@ -13,14 +13,14 @@
|
|
|
13
13
|
* See the License for the specific language governing permissions and
|
|
14
14
|
* limitations under the License.
|
|
15
15
|
*/
|
|
16
|
-
export declare
|
|
16
|
+
export declare enum CreditVocabTerm {
|
|
17
17
|
Conceptualization = "Conceptualization",
|
|
18
18
|
DataCuration = "Data curation",
|
|
19
19
|
FormalAnalysis = "Formal analysis",
|
|
20
20
|
FundingAcquisition = "Funding acquisition",
|
|
21
21
|
Investigation = "Investigation",
|
|
22
22
|
Methodology = "Methodology",
|
|
23
|
-
ProjectAdministration = "
|
|
23
|
+
ProjectAdministration = "Project administration",
|
|
24
24
|
Resources = "Resources",
|
|
25
25
|
Software = "Software",
|
|
26
26
|
Supervision = "Supervision",
|
|
@@ -29,4 +29,4 @@ export declare const enum CreditVocabTerm {
|
|
|
29
29
|
WritingOriginalDraft = "Writing \u2013 original draft",
|
|
30
30
|
WritingReviewEditing = "Writing \u2013 review & editing"
|
|
31
31
|
}
|
|
32
|
-
export declare const
|
|
32
|
+
export declare const CreditRoleUrls: Map<CreditVocabTerm, string>;
|
|
@@ -14,7 +14,7 @@
|
|
|
14
14
|
* limitations under the License.
|
|
15
15
|
*/
|
|
16
16
|
import { Node as ProsemirrorNode, ResolvedPos } from 'prosemirror-model';
|
|
17
|
-
import {
|
|
17
|
+
import { CreditRole, ManuscriptEditorState, ManuscriptNode } from '../schema';
|
|
18
18
|
export declare function iterateChildren(node: ManuscriptNode, recurse?: boolean): Iterable<ManuscriptNode>;
|
|
19
19
|
export declare const findNodePositions: (state: ManuscriptEditorState, predicate: (node: ManuscriptNode) => boolean) => number[];
|
|
20
20
|
export declare const isInGraphicalAbstractSection: ($pos: ResolvedPos) => boolean;
|
|
@@ -28,4 +28,4 @@ export declare const findParentNodeClosestToPos: ($pos: ResolvedPos, predicate:
|
|
|
28
28
|
export declare const getTrimmedTextContent: (node: Element | Document | null, selector?: string) => string | undefined;
|
|
29
29
|
export declare const getHTMLContent: (node: Element, querySelector: string) => string | undefined;
|
|
30
30
|
export declare const dateToTimestamp: (dateElement: Element) => number | undefined;
|
|
31
|
-
export declare function
|
|
31
|
+
export declare function getCreditRole(elem: Element): CreditRole[];
|
|
@@ -10,9 +10,8 @@ export type ContributorFootnote = {
|
|
|
10
10
|
noteID: string;
|
|
11
11
|
noteLabel: string;
|
|
12
12
|
};
|
|
13
|
-
export type
|
|
13
|
+
export type CreditRole = {
|
|
14
14
|
vocabTerm: CreditVocabTerm;
|
|
15
|
-
degreeContribution?: string;
|
|
16
15
|
};
|
|
17
16
|
interface Attrs {
|
|
18
17
|
id: string;
|
|
@@ -29,7 +28,7 @@ interface Attrs {
|
|
|
29
28
|
isJointContributor: boolean;
|
|
30
29
|
footnote: ContributorFootnote[];
|
|
31
30
|
prefix: string;
|
|
32
|
-
|
|
31
|
+
creditRoles?: CreditRole[];
|
|
33
32
|
}
|
|
34
33
|
export interface ContributorNode extends ManuscriptNode {
|
|
35
34
|
attrs: Attrs;
|
package/dist/types/version.d.ts
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
export declare const VERSION = "4.0
|
|
1
|
+
export declare const VERSION = "4.1.0";
|
package/package.json
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@manuscripts/transform",
|
|
3
3
|
"description": "ProseMirror transformer for Manuscripts applications",
|
|
4
|
-
"version": "4.0
|
|
4
|
+
"version": "4.1.0",
|
|
5
5
|
"repository": "github:Atypon-OpenSource/manuscripts-transform",
|
|
6
6
|
"license": "Apache-2.0",
|
|
7
7
|
"main": "dist/cjs",
|