@manuscripts/transform 1.5.7-LEAN-3030 → 1.5.7-LEAN-3030-2

package/dist/cjs/index.js

@@ -15,7 +15,7 @@ var __exportStar = (this && this.__exportStar) || function(m, exports) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.isSectionLabelNode = void 0;
-__exportStar(require("./lib/core-section-categories"), exports);
+__exportStar(require("./lib/section-group-type"), exports);
 __exportStar(require("./lib/table-cell-styles"), exports);
 __exportStar(require("./lib/utils"), exports);
 __exportStar(require("./mathjax"), exports);

package/dist/cjs/jats/importer/index.js

@@ -15,10 +15,8 @@
  * limitations under the License.
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getElementsOrder = exports.parseJATSArticle = exports.parseJATSReferences = exports.parseJATSBody = exports.parseJATSFront = void 0;
+exports.parseJATSArticle = exports.parseJATSBody = exports.parseJATSFront = void 0;
 var parse_jats_article_1 = require("./parse-jats-article");
 Object.defineProperty(exports, "parseJATSFront", { enumerable: true, get: function () { return parse_jats_article_1.parseJATSFront; } });
 Object.defineProperty(exports, "parseJATSBody", { enumerable: true, get: function () { return parse_jats_article_1.parseJATSBody; } });
-Object.defineProperty(exports, "parseJATSReferences", { enumerable: true, get: function () { return parse_jats_article_1.parseJATSReferences; } });
 Object.defineProperty(exports, "parseJATSArticle", { enumerable: true, get: function () { return parse_jats_article_1.parseJATSArticle; } });
-Object.defineProperty(exports, "getElementsOrder", { enumerable: true, get: function () { return parse_jats_article_1.getElementsOrder; } });

package/dist/cjs/jats/importer/jats-body-dom-parser.js

@@ -338,75 +338,6 @@ const nodes = [
             };
         },
     },
-    {
-        tag: 'ref',
-        node: 'bibliography_item',
-        context: 'bibliography_element/',
-        getAttrs: (node) => {
-            const element = node;
-            const ref = {
-                id: element.getAttribute('id'),
-                type: element.getAttribute('type'),
-            };
-            const author = element.getAttribute('author');
-            if (author) {
-                ref.author = author;
-            }
-            const issued = element.getAttribute('issued');
-            if (issued) {
-                ref.issued = issued;
-            }
-            const containerTitle = element.getAttribute('container-title');
-            if (containerTitle) {
-                ref.containerTitle = containerTitle;
-            }
-            const doi = element.getAttribute('doi');
-            if (doi) {
-                ref.doi = doi;
-            }
-            const volume = element.getAttribute('volume');
-            if (volume) {
-                ref.volume = volume;
-            }
-            const issue = element.getAttribute('issue');
-            if (issue) {
-                ref.issue = issue;
-            }
-            const supplement = element.getAttribute('supplement');
-            if (supplement) {
-                ref.supplement = supplement;
-            }
-            const page = element.getAttribute('page');
-            if (page) {
-                ref.page = page;
-            }
-            const title = element.getAttribute('title');
-            if (title) {
-                ref.title = title;
-            }
-            const literal = element.getAttribute('literal');
-            if (literal) {
-                ref.literal = literal;
-            }
-            return ref;
-        },
-    },
-    {
-        tag: 'ref-list',
-        node: 'bibliography_element',
-        context: 'bibliography_section/',
-        getAttrs: (node) => {
-            const element = node;
-            const titleNode = element.querySelector('title');
-            if (titleNode) {
-                element.removeChild(titleNode);
-            }
-            return {
-                id: element.getAttribute('id'),
-                contents: '',
-            };
-        },
-    },
     {
         tag: 'fn-group',
         node: 'footnotes_element',
@@ -495,142 +426,6 @@ const nodes = [
             };
         },
     },
-    {
-        tag: 'sec[sec-type="bibliography"]',
-        node: 'bibliography_section',
-        getAttrs: (node) => {
-            const element = node;
-            return {
-                id: element.getAttribute('id'),
-            };
-        },
-    },
-    {
-        tag: 'sec[sec-type="affiliations"]',
-        node: 'affiliations',
-        getAttrs: (node) => {
-            const element = node;
-            return {
-                id: element.getAttribute('id'),
-                category: 'MPSectionCategory:affiliations',
-            };
-        },
-    },
-    {
-        tag: 'aff',
-        node: 'affiliation',
-        context: 'affiliations/',
-        getAttrs: (node) => {
-            const element = node;
-            const aff = {
-                id: element.getAttribute('id'),
-            };
-            const institution = element.getAttribute('institution');
-            if (institution) {
-                aff.institution = institution;
-            }
-            const email = element.getAttribute('email');
-            if (email) {
-                aff.bibliographicName = JSON.parse(email);
-            }
-            const department = element.getAttribute('department');
-            if (department) {
-                aff.department = department;
-            }
-            const addressLine1 = element.getAttribute('addressLine1');
-            if (addressLine1) {
-                aff.addressLine1 = addressLine1;
-            }
-            const addressLine2 = element.getAttribute('addressLine2');
-            if (addressLine2) {
-                aff.addressLine2 = addressLine2;
-            }
-            const addressLine3 = element.getAttribute('addressLine3');
-            if (addressLine3) {
-                aff.addressLine3 = addressLine3;
-            }
-            const postCode = element.getAttribute('postCode');
-            if (postCode) {
-                aff.postCode = postCode;
-            }
-            const country = element.getAttribute('country');
-            if (country) {
-                aff.country = country;
-            }
-            const priority = element.getAttribute('priority');
-            if (priority) {
-                aff.priority = parseInt(priority);
-            }
-            return aff;
-        },
-    },
-    {
-        tag: 'sec[sec-type="contributors"]',
-        node: 'contributors',
-        getAttrs: (node) => {
-            const element = node;
-            return {
-                id: element.getAttribute('id'),
-                category: 'MPSectionCategory:contributors',
-            };
-        },
-    },
-    {
-        tag: 'contrib',
-        node: 'contributor',
-        context: 'contributors/',
-        getAttrs: (node) => {
-            const element = node;
-            const contrib = {
-                id: element.getAttribute('id'),
-            };
-            const role = element.getAttribute('role');
-            if (role) {
-                contrib.role = role;
-            }
-            const affiliations = element.getAttribute('affiliations');
-            if (affiliations) {
-                contrib.affiliations = JSON.parse(affiliations);
-            }
-            const footnote = element.getAttribute('footnote');
-            if (footnote) {
-                contrib.footnote = JSON.parse(footnote);
-            }
-            const corresp = element.getAttribute('corresp');
-            if (corresp) {
-                contrib.corresp = JSON.parse(corresp);
-            }
-            const bibliographicName = element.getAttribute('bibliographicName');
-            if (bibliographicName) {
-                contrib.bibliographicName = JSON.parse(bibliographicName);
-            }
-            const userID = element.getAttribute('userID');
-            if (userID) {
-                contrib.userID = userID;
-            }
-            const priority = element.getAttribute('priority');
-            if (priority) {
-                contrib.priority = parseInt(priority);
-            }
-            const invitationID = element.getAttribute('invitationID');
-            if (invitationID) {
-                contrib.invitationID = invitationID;
-            }
-            const objectType = element.getAttribute('objectType');
-            if (objectType) {
-                contrib.objectType = objectType;
-            }
-            const isCorresponding = element.getAttribute('isCorresponding');
-            if (isCorresponding) {
-                contrib.isCorresponding = JSON.parse(isCorresponding);
-            }
-            const ORCIDIdentifier = element.getAttribute('ORCIDIdentifier');
-            if (ORCIDIdentifier) {
-                contrib.ORCIDIdentifier = ORCIDIdentifier;
-            }
-            return contrib;
-        },
-    },
     {
         tag: 'sec[sec-type="keywords"]',
         node: 'keywords',
@@ -780,15 +575,11 @@ const nodes = [
         tag: 'xref[ref-type="bibr"]',
         node: 'citation',
         getAttrs: (node) => {
-            var _a;
+            var _a, _b;
             const element = node;
-            const embeddedCitationAttr = element.getAttribute('data-reference-embedded-citation');
             return {
-                rid: element.getAttribute('rid'),
-                contents: (_a = element.textContent) === null || _a === void 0 ? void 0 : _a.trim(),
-                embeddedCitationItems: embeddedCitationAttr
-                    ? JSON.parse(embeddedCitationAttr)
-                    : null,
+                rids: ((_a = element.getAttribute('rid')) === null || _a === void 0 ? void 0 : _a.split(/\s+/)) || [],
+                contents: (_b = element.textContent) === null || _b === void 0 ? void 0 : _b.trim(),
             };
         },
     },
@@ -796,11 +587,11 @@ const nodes = [
         tag: 'xref[ref-type="fn"]',
         node: 'inline_footnote',
         getAttrs: (node) => {
-            var _a;
+            var _a, _b;
             const element = node;
             return {
-                rid: element.getAttribute('rid'),
-                contents: (_a = element.textContent) === null || _a === void 0 ? void 0 : _a.trim(),
+                rids: ((_a = element.getAttribute('rid')) === null || _a === void 0 ? void 0 : _a.split(/\s+/)) || [],
+                contents: (_b = element.textContent) === null || _b === void 0 ? void 0 : _b.trim(),
             };
         },
     },
@@ -808,11 +599,11 @@ const nodes = [
         tag: 'xref',
         node: 'cross_reference',
         getAttrs: (node) => {
-            var _a;
+            var _a, _b;
             const element = node;
             return {
-                rid: element.getAttribute('rid'),
-                label: (_a = element.textContent) === null || _a === void 0 ? void 0 : _a.trim(),
+                rids: ((_a = element.getAttribute('rid')) === null || _a === void 0 ? void 0 : _a.split(/\s+/)) || [],
+                label: (_b = element.textContent) === null || _b === void 0 ? void 0 : _b.trim(),
             };
         },
     },