@manuscripts/transform 1.5.2-LEAN-3034 → 1.5.2-LEAN-3032

package/dist/cjs/jats/importer/jats-body-dom-parser.js

@@ -507,7 +507,7 @@ const nodes = [
     },
     {
         tag: 'sec[sec-type="affiliations"]',
-        node: 'affiliations_section',
+        node: 'affiliations',
         getAttrs: (node) => {
             const element = node;
             return {
@@ -519,7 +519,7 @@ const nodes = [
     {
         tag: 'aff',
         node: 'affiliation',
-        context: 'affiliations_section/',
+        context: 'affiliations/',
         getAttrs: (node) => {
             const element = node;
             const aff = {
@@ -566,7 +566,7 @@ const nodes = [
     },
     {
         tag: 'sec[sec-type="contributors"]',
-        node: 'contributors_section',
+        node: 'contributors',
         getAttrs: (node) => {
             const element = node;
             return {
@@ -578,7 +578,7 @@ const nodes = [
     {
         tag: 'contrib',
         node: 'contributor',
-        context: 'contributors_section/',
+        context: 'contributors/',
         getAttrs: (node) => {
             const element = node;
             const contrib = {
@@ -633,7 +633,7 @@ const nodes = [
     },
     {
         tag: 'sec[sec-type="keywords"]',
-        node: 'keywords_section',
+        node: 'keywords',
         getAttrs: (node) => {
             const element = node;
             return {
@@ -644,9 +644,21 @@ const nodes = [
     },
     {
         tag: 'kwd-group-list',
-        context: 'keywords_section/',
+        context: 'keywords/',
         node: 'keywords_element',
     },
+    {
+        tag: 'sec[sec-type="abstracts"]',
+        node: 'abstracts',
+    },
+    {
+        tag: 'sec[sec-type="body"]',
+        node: 'body',
+    },
+    {
+        tag: 'sec[sec-type="backmatter"]',
+        node: 'backmatter',
+    },
     {
         tag: 'sec',
         node: 'section',
@@ -726,7 +738,7 @@ const nodes = [
     {
         tag: 'title',
         node: 'section_title',
-        context: 'section/|footnotes_section/|bibliography_section/|keywords_section/',
+        context: 'section/|footnotes_section/|bibliography_section/|keywords/',
     },
     {
         tag: 'title',

package/dist/cjs/jats/jats-exporter.js

@@ -23,7 +23,6 @@ const json_schema_1 = require("@manuscripts/json-schema");
 const debug_1 = __importDefault(require("debug"));
 const prosemirror_model_1 = require("prosemirror-model");
 const w3c_xmlserializer_1 = __importDefault(require("w3c-xmlserializer"));
-const citationProvider_1 = require("../lib/citationProvider");
 const html_1 = require("../lib/html");
 const styled_content_1 = require("../lib/styled-content");
 const utils_1 = require("../lib/utils");
@@ -119,16 +118,9 @@ const sortContributors = (a, b) => Number(a.priority) - Number(b.priority);
 class JATSExporter {
     constructor() {
         this.serializeToJATS = async (fragment, modelMap, manuscriptID, options = {}) => {
-            const { version = '1.2', doi, id, frontMatterOnly = false, links, idGenerator, mediaPathGenerator, citationStyle, locale, } = options;
+            const { version = '1.2', doi, id, frontMatterOnly = false, links, idGenerator, mediaPathGenerator, } = options;
             this.modelMap = modelMap;
             this.models = Array.from(this.modelMap.values());
-            if (citationStyle) {
-                this.citeProcEngine = citationProvider_1.CitationProvider.getEngine({
-                    bibliographyItemsMap: this.getBibliographyItemsMap(),
-                    citationStyle: citationStyle,
-                    locale: locale,
-                });
-            }
             this.createSerializer();
             const versionIds = (0, jats_versions_1.selectVersionIds)(version);
             this.document = document.implementation.createDocument(null, 'article', document.implementation.createDocumentType('article', versionIds.publicId, versionIds.systemId));
@@ -438,9 +430,11 @@ class JATSExporter {
             }
         };
         this.buildBody = (fragment) => {
-            const content = this.serializeFragment(fragment);
             const body = this.document.createElement('body');
-            body.appendChild(content);
+            fragment.forEach((cFragment) => {
+                const serializedNode = this.serializeNode(cFragment);
+                body.append(...serializedNode.childNodes);
+            });
             this.fixBody(body, fragment);
             return body;
         };
@@ -606,8 +600,8 @@ class JATSExporter {
         this.createSerializer = () => {
             const getModel = (id) => id ? this.modelMap.get(id) : undefined;
             const nodes = {
-                affiliations_section: () => '',
-                contributors_section: () => '',
+                affiliations: () => '',
+                contributors: () => '',
                 table_element_footer: () => ['table-wrap-foot', 0],
                 contributor: () => '',
                 affiliation: () => '',
@@ -617,6 +611,9 @@ class JATSExporter {
                 bibliography_item: () => '',
                 comment_list: () => '',
                 keywords_group: () => '',
+                body: () => ['body', 0],
+                abstracts: () => ['abstract', 0],
+                backmatter: () => ['backmatter', 0],
                 bibliography_section: (node) => [
                     'ref-list',
                     { id: normalizeID(node.attrs.id) },
@@ -651,10 +648,7 @@ class JATSExporter {
                     const xref = this.document.createElement('xref');
                     xref.setAttribute('ref-type', 'bibr');
                     xref.setAttribute('rid', rids.map((item) => normalizeID(item.bibliographyItem)).join(' '));
-                    if (this.citeProcEngine) {
-                        xref.textContent = this.generateCitationContent(node);
-                    }
-                    else if (node.attrs.contents) {
+                    if (node.attrs.contents) {
                         const text = (0, html_1.textFromHTML)(node.attrs.contents);
                         if (text !== null && text.length) {
                             xref.textContent = text;
@@ -798,7 +792,7 @@ class JATSExporter {
                 },
                 keyword: () => '',
                 keywords_element: () => '',
-                keywords_section: () => '',
+                keywords: () => '',
                 link: (node) => {
                     const text = node.textContent;
                     if (!text) {
@@ -1584,25 +1578,6 @@ class JATSExporter {
             return name;
         };
     }
-    getBibliographyItemsMap() {
-        const map = new Map();
-        this.modelMap.forEach((model) => {
-            if (model.objectType === json_schema_1.ObjectTypes.BibliographyItem) {
-                map.set(model._id, model);
-            }
-        });
-        return map;
-    }
-    generateCitationContent(node) {
-        var _a;
-        const citationItems = (_a = node.attrs.embeddedCitationItems) === null || _a === void 0 ? void 0 : _a.map(({ bibliographyItem }) => ({
-            id: bibliographyItem,
-        }));
-        return this.citeProcEngine.previewCitationCluster({
-            citationID: node.attrs.rid,
-            citationItems: citationItems,
-        }, [], [], 'text');
-    }
     buildKeywords(articleMeta) {
         const keywords = [...this.modelMap.values()].filter((model) => model.objectType === json_schema_1.ObjectTypes.Keyword);
         const keywordGroups = new Map();

package/dist/cjs/lib/utils.js

@@ -15,7 +15,7 @@
  * limitations under the License.
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getTrimmedTextContent = exports.findParentNodeClosestToPos = exports.isInAbstractsSection = exports.isInBibliographySection = exports.isInGraphicalAbstractSection = exports.findNodePositions = exports.iterateChildren = void 0;
+exports.groupBy = exports.getTrimmedTextContent = exports.findParentNodeClosestToPos = exports.isInAbstractsSection = exports.isInBibliographySection = exports.isInGraphicalAbstractSection = exports.findNodePositions = exports.iterateChildren = void 0;
 const bibliography_section_1 = require("../schema/nodes/bibliography_section");
 const graphical_abstract_section_1 = require("../schema/nodes/graphical_abstract_section");
 function* iterateChildren(node, recurse = false) {
@@ -94,3 +94,12 @@ const getTrimmedTextContent = (node, querySelector) => {
     return (_b = (_a = node.querySelector(querySelector)) === null || _a === void 0 ? void 0 : _a.textContent) === null || _b === void 0 ? void 0 : _b.trim();
 };
 exports.getTrimmedTextContent = getTrimmedTextContent;
+const groupBy = (list, getKey) => list.reduce((previous, currentItem) => {
+    const group = getKey(currentItem);
+    if (!previous[group]) {
+        previous[group] = [];
+    }
+    previous[group].push(currentItem);
+    return previous;
+}, {});
+exports.groupBy = groupBy;

package/dist/cjs/schema/index.js

@@ -46,6 +46,7 @@ const comment_1 = require("./nodes/comment");
 const comment_list_1 = require("./nodes/comment_list");
 const contributor_1 = require("./nodes/contributor");
 const contributors_section_1 = require("./nodes/contributors_section");
+const core_section_1 = require("./nodes/core_section");
 const cross_reference_1 = require("./nodes/cross_reference");
 const doc_1 = require("./nodes/doc");
 const equation_1 = require("./nodes/equation");
@@ -168,6 +169,9 @@ exports.schema = new prosemirror_model_1.Schema({
         caption: caption_1.caption,
         caption_title: caption_title_1.captionTitle,
         citation: citation_1.citation,
+        abstracts: core_section_1.coreSection,
+        body: core_section_1.coreSection,
+        backmatter: core_section_1.coreSection,
         cross_reference: cross_reference_1.crossReference,
         doc: doc_1.doc,
         equation: equation_1.equation,
@@ -185,7 +189,7 @@ exports.schema = new prosemirror_model_1.Schema({
         inline_footnote: inline_footnote_1.inlineFootnote,
         keyword: keyword_1.keyword,
         keywords_element: keywords_element_1.keywordsElement,
-        keywords_section: keywords_section_1.keywordsSection,
+        keywords: keywords_section_1.keywordsSection,
         keywords_group: keywords_group_1.keywordsGroup,
         link: link_1.link,
         list_item: list_1.listItem,
@@ -216,7 +220,7 @@ exports.schema = new prosemirror_model_1.Schema({
         meta_section: meta_section_1.metaSection,
         contributor: contributor_1.contributor,
         table_element_footer: table_element_footer_1.tableElementFooter,
-        affiliations_section: affiliations_section_1.affiliationsSection,
-        contributors_section: contributors_section_1.contributorsSection,
+        affiliations: affiliations_section_1.affiliationsSection,
+        contributors: contributors_section_1.contributorsSection,
     },
 });

package/dist/cjs/schema/nodes/affiliations_section.js

@@ -11,5 +11,5 @@ exports.affiliationsSection = {
     selectable: false,
     toDOM: () => ['section', 0],
 };
-const isAffiliationsSectionNode = (node) => node.type === node.type.schema.nodes.affiliations_section;
+const isAffiliationsSectionNode = (node) => node.type === node.type.schema.nodes.affiliations;
 exports.isAffiliationsSectionNode = isAffiliationsSectionNode;

package/dist/cjs/schema/nodes/contributors_section.js

@@ -11,5 +11,5 @@ exports.contributorsSection = {
     selectable: false,
     toDOM: () => ['section', 0],
 };
-const isContributorsSectionNode = (node) => node.type === node.type.schema.nodes.contributors_section;
+const isContributorsSectionNode = (node) => node.type === node.type.schema.nodes.contributors;
 exports.isContributorsSectionNode = isContributorsSectionNode;

package/dist/cjs/schema/nodes/core_section.js

@@ -0,0 +1,27 @@
+"use strict";
+/*!
+ * © 2019 Atypon Systems LLC
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.coreSection = void 0;
+exports.coreSection = {
+    content: '(section | sections)*',
+    atom: true,
+    attrs: {
+        id: { default: '' },
+    },
+    group: 'block sections',
+    toDOM: () => ['section', 0],
+};

package/dist/cjs/schema/nodes/keywords_section.js

@@ -43,5 +43,5 @@ exports.keywordsSection = {
         ];
     },
 };
-const isKeywordsSectionNode = (node) => node.type === node.type.schema.nodes.keywords_section;
+const isKeywordsSectionNode = (node) => node.type === node.type.schema.nodes.keywords;
 exports.isKeywordsSectionNode = isKeywordsSectionNode;

package/dist/cjs/schema/nodes/manuscript.js

@@ -17,7 +17,7 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.manuscript = void 0;
 exports.manuscript = {
-    content: '(section | sections)+ meta_section',
+    content: 'contributors? affiliations? keywords? abstracts body backmatter meta_section',
     attrs: {
         id: { default: '' },
     },

package/dist/cjs/transformer/decode.js

@@ -34,6 +34,7 @@ const json_schema_1 = require("@manuscripts/json-schema");
 const debug_1 = __importDefault(require("debug"));
 const prosemirror_model_1 = require("prosemirror-model");
 const errors_1 = require("../errors");
+const utils_1 = require("../lib/utils");
 const schema_1 = require("../schema");
 const highlight_markers_1 = require("./highlight-markers");
 const id_1 = require("./id");
@@ -62,6 +63,7 @@ exports.sortSectionsByPriority = sortSectionsByPriority;
 const getSections = (modelMap) => (0, exports.getModelsByType)(modelMap, json_schema_1.ObjectTypes.Section).sort(exports.sortSectionsByPriority);
 const getAffiliations = (modelMap) => (0, exports.getModelsByType)(modelMap, json_schema_1.ObjectTypes.Affiliation);
 const getContributors = (modelMap) => (0, exports.getModelsByType)(modelMap, json_schema_1.ObjectTypes.Contributor);
+const getKeywordElements = (modelMap) => (0, exports.getModelsByType)(modelMap, json_schema_1.ObjectTypes.KeywordsElement);
 const isManuscriptNode = (model) => model !== null;
 exports.isManuscriptNode = isManuscriptNode;
 const isParagraphElement = (0, object_types_1.hasObjectType)(json_schema_1.ObjectTypes.ParagraphElement);
@@ -86,10 +88,13 @@ class Decoder {
         ]);
     }
     handleMissingRootSectionNodes(rootSectionNodes) {
-        if (!rootSectionNodes.find((node) => node.type.name === 'affiliations_section')) {
+        if (!rootSectionNodes.find((node) => node.type.name === 'keywords')) {
+            this.createKeywordsSectionNode(rootSectionNodes);
+        }
+        if (!rootSectionNodes.find((node) => node.type.name === 'affiliations')) {
             this.createAffiliationSectionNode(rootSectionNodes);
         }
-        if (!rootSectionNodes.find((node) => node.type.name === 'contributors_section')) {
+        if (!rootSectionNodes.find((node) => node.type.name === 'contributors')) {
             this.createContributorSectionNode(rootSectionNodes);
         }
     }
@@ -97,37 +102,79 @@ class Decoder {
         const affiliationNodes = getAffiliations(this.modelMap)
             .map((affiliation) => this.decode(affiliation))
             .filter(Boolean);
-        if (affiliationNodes.length) {
-            const node = schema_1.schema.nodes.affiliations_section.createAndFill({
-                id: (0, id_1.generateNodeID)(schema_1.schema.nodes.section),
-            }, affiliationNodes);
-            rootSectionNodes.unshift(node);
-        }
+        const node = schema_1.schema.nodes.affiliations.createAndFill({
+            id: (0, id_1.generateNodeID)(schema_1.schema.nodes.section),
+        }, affiliationNodes);
+        rootSectionNodes.unshift(node);
     }
     createContributorSectionNode(rootSectionNodes) {
         const contributorNodes = getContributors(this.modelMap)
             .map((contributor) => this.decode(contributor))
             .filter(Boolean);
-        if (contributorNodes.length) {
-            const node = schema_1.schema.nodes.contributors_section.createAndFill({
+        const node = schema_1.schema.nodes.contributors.createAndFill({
+            id: (0, id_1.generateNodeID)(schema_1.schema.nodes.section),
+        }, contributorNodes);
+        rootSectionNodes.unshift(node);
+    }
+    createKeywordsSectionNode(rootSectionNodes) {
+        const keywordElementNodes = getKeywordElements(this.modelMap)
+            .map((keywordEl) => this.decode(keywordEl))
+            .filter(Boolean);
+        if (keywordElementNodes) {
+            const node = schema_1.schema.nodes.keywords.createAndFill({
                 id: (0, id_1.generateNodeID)(schema_1.schema.nodes.section),
-            }, contributorNodes);
+            }, [
+                schema_1.schema.nodes.section_title.create({}, schema_1.schema.text('Keywords')),
+                ...keywordElementNodes,
+            ]);
             rootSectionNodes.unshift(node);
         }
     }
     createRootSectionNodes() {
-        let rootSections = getSections(this.modelMap).filter((section) => !section.path || section.path.length <= 1);
+        let rootSections = getSections(this.modelMap)
+            .filter((section) => !section.path || section.path.length <= 1)
+            .filter((section) => section.category !== 'MPSectionCategory:contributors' &&
+            section.category !== 'MPSectionCategory:affiliations' &&
+            section.category !== 'MPSectionCategory:keywords');
         rootSections = this.addGeneratedLabels(rootSections);
-        const rootSectionNodes = rootSections
+        const sectionGroups = (0, utils_1.groupBy)(rootSections, (sec) => {
+            var _a;
+            return (0, section_category_1.chooseCoreSectionBySection)((_a = sec.category) !== null && _a !== void 0 ? _a : '');
+        });
+        this.ensureCoreSectionsExist(sectionGroups);
+        const absSectionNode = sectionGroups['MPSectionCategory:abstracts']
             .map(this.decode)
             .filter(exports.isManuscriptNode);
-        this.handleMissingRootSectionNodes(rootSectionNodes);
-        if (!rootSectionNodes.length) {
-            rootSectionNodes.push(schema_1.schema.nodes.section.createAndFill({
-                id: (0, id_1.generateNodeID)(schema_1.schema.nodes.section),
-            }));
+        const bodySectionNodes = sectionGroups['MPSectionCategory:body']
+            .map(this.decode)
+            .filter(exports.isManuscriptNode);
+        const backmatterSectionNodes = sectionGroups['MPSectionCategory:backmatter']
+            .map(this.decode)
+            .filter(exports.isManuscriptNode);
+        const abstractCoreSectionNodes = this.createAndFill(schema_1.schema.nodes.abstracts, absSectionNode);
+        const bodyCoreSectionNodes = this.createAndFill(schema_1.schema.nodes.body, bodySectionNodes);
+        const backmatterCoreSectionNodes = this.createAndFill(schema_1.schema.nodes.backmatter, backmatterSectionNodes);
+        return [
+            abstractCoreSectionNodes,
+            bodyCoreSectionNodes,
+            backmatterCoreSectionNodes,
+        ];
+    }
+    ensureCoreSectionsExist(coreSections) {
+        if (!coreSections['MPSectionCategory:abstracts']) {
+            coreSections['MPSectionCategory:abstracts'] = [];
         }
-        return rootSectionNodes;
+        if (!coreSections['MPSectionCategory:body']) {
+            coreSections['MPSectionCategory:body'] = [];
+        }
+        if (!coreSections['MPSectionCategory:backmatter']) {
+            coreSections['MPSectionCategory:backmatter'] = [];
+        }
+    }
+    createAndFill(nodeType, content) {
+        return nodeType.createAndFill({
+            id: (0, id_1.generateNodeID)(nodeType),
+        }, content);
     }
     createCommentsNode(model) {
         const comments = [];
@@ -632,6 +679,7 @@ class Decoder {
         this.getModel = (id) => this.modelMap.get(id);
         this.createArticleNode = (manuscriptID) => {
             const rootSectionNodes = this.createRootSectionNodes();
+            this.handleMissingRootSectionNodes(rootSectionNodes);
             const metaSectionNode = this.createMetaSectionNode();
             const contents = [...rootSectionNodes, metaSectionNode];
             return schema_1.schema.nodes.manuscript.create({

package/dist/cjs/transformer/encode.js

@@ -425,31 +425,6 @@ const encoders = {
     keywords_group: (node) => ({
         type: node.attrs.type,
     }),
-    keywords_section: (node, parent, path, priority) => ({
-        category: (0, section_category_1.buildSectionCategory)(node),
-        priority: priority.value++,
-        title: inlineContentsOfNodeType(node, node.type.schema.nodes.section_title),
-        path: path.concat([node.attrs.id]),
-        elementIDs: childElements(node)
-            .map((childNode) => childNode.attrs.id)
-            .filter((id) => id),
-    }),
-    affiliations_section: (node, parent, path, priority) => ({
-        category: (0, section_category_1.buildSectionCategory)(node),
-        priority: priority.value++,
-        path: path.concat([node.attrs.id]),
-        elementIDs: childElements(node)
-            .map((childNode) => childNode.attrs.id)
-            .filter((id) => id),
-    }),
-    contributors_section: (node, parent, path, priority) => ({
-        category: (0, section_category_1.buildSectionCategory)(node),
-        priority: priority.value++,
-        path: path.concat([node.attrs.id]),
-        elementIDs: childElements(node)
-            .map((childNode) => childNode.attrs.id)
-            .filter((id) => id),
-    }),
     missing_figure: (node) => ({
         position: node.attrs.position || undefined,
     }),
@@ -570,6 +545,14 @@ const modelFromNode = (node, parent, path, priority) => {
     return { model, commentAnnotationsMap };
 };
 exports.modelFromNode = modelFromNode;
+function isCoreSection(child) {
+    return (child.type === schema_1.schema.nodes.abstracts ||
+        child.type === schema_1.schema.nodes.body ||
+        child.type === schema_1.schema.nodes.backmatter ||
+        child.type === schema_1.schema.nodes.affiliations ||
+        child.type === schema_1.schema.nodes.contributors ||
+        child.type === schema_1.schema.nodes.keywords);
+}
 const encode = (node) => {
     const models = new Map();
     const priority = {
@@ -577,6 +560,10 @@ const encode = (node) => {
     };
     const placeholders = ['placeholder', 'placeholder_element'];
     const addModel = (path, parent) => (child) => {
+        if (isCoreSection(child)) {
+            child.forEach(addModel([], child));
+            return;
+        }
         if (!child.attrs.id) {
             return;
         }

package/dist/cjs/transformer/node-names.js

@@ -38,6 +38,6 @@ exports.nodeNames = new Map([
     [schema_1.schema.nodes.table_element, 'Table'],
     [schema_1.schema.nodes.blockquote_element, 'Block Quote'],
     [schema_1.schema.nodes.pullquote_element, 'Pull Quote'],
-    [schema_1.schema.nodes.keywords_section, 'Section'],
+    [schema_1.schema.nodes.keywords, 'Section'],
     [schema_1.schema.nodes.toc_section, 'Section'],
 ]);

package/dist/cjs/transformer/node-title.js

@@ -48,7 +48,7 @@ const nodeTitle = (node) => {
         case nodes.section:
         case nodes.bibliography_section:
         case nodes.footnotes_section:
-        case nodes.keywords_section:
+        case nodes.keywords:
         case nodes.toc_section:
         case nodes.graphical_abstract_section:
             return snippetOfNodeType(node, nodes.section_title);

package/dist/cjs/transformer/node-types.js

@@ -19,6 +19,9 @@ exports.isNodeType = exports.isSectionNodeType = exports.isElementNodeType = exp
 const json_schema_1 = require("@manuscripts/json-schema");
 const schema_1 = require("../schema");
 exports.nodeTypesMap = new Map([
+    [schema_1.schema.nodes.abstracts, json_schema_1.ObjectTypes.Section],
+    [schema_1.schema.nodes.body, json_schema_1.ObjectTypes.Section],
+    [schema_1.schema.nodes.backmatter, json_schema_1.ObjectTypes.Section],
     [schema_1.schema.nodes.comment, json_schema_1.ObjectTypes.CommentAnnotation],
     [schema_1.schema.nodes.bibliography_item, json_schema_1.ObjectTypes.BibliographyItem],
     [schema_1.schema.nodes.bibliography_element, json_schema_1.ObjectTypes.BibliographyElement],
@@ -40,7 +43,7 @@ exports.nodeTypesMap = new Map([
     [schema_1.schema.nodes.inline_equation, json_schema_1.ObjectTypes.InlineMathFragment],
     [schema_1.schema.nodes.keyword, json_schema_1.ObjectTypes.Keyword],
     [schema_1.schema.nodes.keywords_element, json_schema_1.ObjectTypes.KeywordsElement],
-    [schema_1.schema.nodes.keywords_section, json_schema_1.ObjectTypes.Section],
+    [schema_1.schema.nodes.keywords, json_schema_1.ObjectTypes.Section],
     [schema_1.schema.nodes.keywords_group, json_schema_1.ObjectTypes.KeywordGroup],
     [schema_1.schema.nodes.listing, json_schema_1.ObjectTypes.Listing],
     [schema_1.schema.nodes.listing_element, json_schema_1.ObjectTypes.ListingElement],
@@ -57,8 +60,8 @@ exports.nodeTypesMap = new Map([
     [schema_1.schema.nodes.affiliation, json_schema_1.ObjectTypes.Affiliation],
     [schema_1.schema.nodes.contributor, json_schema_1.ObjectTypes.Contributor],
     [schema_1.schema.nodes.table_element_footer, json_schema_1.ObjectTypes.TableElementFooter],
-    [schema_1.schema.nodes.contributors_section, json_schema_1.ObjectTypes.Section],
-    [schema_1.schema.nodes.affiliations_section, json_schema_1.ObjectTypes.Section],
+    [schema_1.schema.nodes.contributors, json_schema_1.ObjectTypes.Section],
+    [schema_1.schema.nodes.affiliations, json_schema_1.ObjectTypes.Section],
 ]);
 const isExecutableNodeType = (type) => (0, schema_1.hasGroup)(type, schema_1.GROUP_EXECUTABLE);
 exports.isExecutableNodeType = isExecutableNodeType;

package/dist/cjs/transformer/section-category.js

@@ -15,14 +15,14 @@
  * limitations under the License.
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.chooseSectionCategoryFromTitle = exports.chooseSectionCategory = exports.chooseSectionCategoryByType = exports.chooseSecType = exports.chooseJatsFnType = exports.buildSectionCategory = exports.guessSectionCategory = exports.chooseSectionLableName = exports.chooseSectionNodeType = exports.isAnySectionNode = exports.getCoreSectionTitles = void 0;
+exports.chooseSectionCategoryFromTitle = exports.chooseSectionCategory = exports.chooseSectionCategoryByType = exports.chooseCoreSectionBySection = exports.chooseSecType = exports.chooseJatsFnType = exports.buildSectionCategory = exports.guessSectionCategory = exports.chooseSectionLableName = exports.chooseSectionNodeType = exports.isAnySectionNode = exports.getCoreSectionTitles = void 0;
 const json_schema_1 = require("@manuscripts/json-schema");
 const core_section_categories_1 = require("../lib/core-section-categories");
 const schema_1 = require("../schema");
 const sectionNodeTypes = [
     schema_1.schema.nodes.bibliography_section,
     schema_1.schema.nodes.footnotes_section,
-    schema_1.schema.nodes.keywords_section,
+    schema_1.schema.nodes.keywords,
     schema_1.schema.nodes.section,
     schema_1.schema.nodes.toc_section,
 ];
@@ -45,11 +45,11 @@ const chooseSectionNodeType = (category) => {
         case 'MPSectionCategory:endnotes':
             return schema_1.schema.nodes.footnotes_section;
         case 'MPSectionCategory:keywords':
-            return schema_1.schema.nodes.keywords_section;
+            return schema_1.schema.nodes.keywords;
         case 'MPSectionCategory:affiliations':
-            return schema_1.schema.nodes.affiliations_section;
+            return schema_1.schema.nodes.affiliations;
         case 'MPSectionCategory:contributors':
-            return schema_1.schema.nodes.contributors_section;
+            return schema_1.schema.nodes.contributors;
         case 'MPSectionCategory:toc':
             return schema_1.schema.nodes.toc_section;
         default:
@@ -90,15 +90,15 @@ const buildSectionCategory = (node) => {
             return 'MPSectionCategory:bibliography';
         case schema_1.schema.nodes.footnotes_section:
             return 'MPSectionCategory:endnotes';
-        case schema_1.schema.nodes.keywords_section:
+        case schema_1.schema.nodes.keywords:
             return 'MPSectionCategory:keywords';
         case schema_1.schema.nodes.toc_section:
             return 'MPSectionCategory:toc';
         case schema_1.schema.nodes.graphical_abstract_section:
             return 'MPSectionCategory:abstract-graphical';
-        case schema_1.schema.nodes.affiliations_section:
+        case schema_1.schema.nodes.affiliations:
             return 'MPSectionCategory:affiliations';
-        case schema_1.schema.nodes.contributors_section:
+        case schema_1.schema.nodes.contributors:
             return 'MPSectionCategory:contributors';
         default:
             return node.attrs.category || undefined;
@@ -128,6 +128,33 @@ const chooseSecType = (sectionCategory) => {
     }
 };
 exports.chooseSecType = chooseSecType;
+const chooseCoreSectionBySection = (section) => {
+    switch (section) {
+        case 'MPSectionCategory:abstract':
+        case 'MPSectionCategory:abstract-teaser':
+        case 'MPSectionCategory:abstract-graphical':
+            return 'MPSectionCategory:abstracts';
+        case 'MPSectionCategory:acknowledgement':
+        case 'MPSectionCategory:availability':
+        case 'MPSectionCategory:conclusions':
+        case 'MPSectionCategory:bibliography':
+        case 'MPSectionCategory:discussion':
+        case 'MPSectionCategory:endnotes':
+        case 'MPSectionCategory:appendices':
+        case 'MPSectionCategory:competing-interests':
+        case 'MPSectionCategory:con':
+        case 'MPSectionCategory:deceased':
+        case 'MPSectionCategory:ethics-statement':
+        case 'MPSectionCategory:financial-disclosure':
+        case 'MPSectionCategory:supplementary-material':
+        case 'MPSectionCategory:supported-by':
+        case 'MPSectionCategory:abbreviations':
+        case 'MPSectionCategory:results':
+            return 'MPSectionCategory:backmatter';
+    }
+    return 'MPSectionCategory:body';
+};
+exports.chooseCoreSectionBySection = chooseCoreSectionBySection;
 const chooseSectionCategoryByType = (secType) => {
     switch (secType) {
         case 'abstract':