@manuscripts/transform 1.3.8 → 1.3.9

package/dist/cjs/jats/jats-exporter.js

@@ -598,6 +598,11 @@ class JATSExporter {
         this.createSerializer = () => {
             const getModel = (id) => id ? this.modelMap.get(id) : undefined;
             const nodes = {
+                contributor_list: () => '',
+                contributor: () => '',
+                affiliation_list: () => '',
+                affiliation: () => '',
+                meta_section: () => '',
                 attribution: () => ['attrib', 0],
                 bibliography_element: () => '',
                 bibliography_item: () => '',

package/dist/cjs/schema/index.js

@@ -32,6 +32,8 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.schema = void 0;
 const prosemirror_model_1 = require("prosemirror-model");
 const marks_1 = require("./marks");
+const affiliation_1 = require("./nodes/affiliation");
+const affiliation_list_1 = require("./nodes/affiliation_list");
 const attribution_1 = require("./nodes/attribution");
 const bibliography_element_1 = require("./nodes/bibliography_element");
 const bibliography_item_1 = require("./nodes/bibliography_item");
@@ -42,6 +44,8 @@ const caption_title_1 = require("./nodes/caption_title");
 const citation_1 = require("./nodes/citation");
 const comment_1 = require("./nodes/comment");
 const comment_list_1 = require("./nodes/comment_list");
+const contributor_1 = require("./nodes/contributor");
+const contributor_list_1 = require("./nodes/contributor_list");
 const cross_reference_1 = require("./nodes/cross_reference");
 const doc_1 = require("./nodes/doc");
 const equation_1 = require("./nodes/equation");
@@ -66,6 +70,7 @@ const list_1 = require("./nodes/list");
 const listing_1 = require("./nodes/listing");
 const listing_element_1 = require("./nodes/listing_element");
 const manuscript_1 = require("./nodes/manuscript");
+const meta_section_1 = require("./nodes/meta_section");
 const missing_figure_1 = require("./nodes/missing_figure");
 const paragraph_1 = require("./nodes/paragraph");
 const placeholder_1 = require("./nodes/placeholder");
@@ -130,6 +135,11 @@ __exportStar(require("./nodes/table_row"), exports);
 __exportStar(require("./nodes/text"), exports);
 __exportStar(require("./nodes/toc_element"), exports);
 __exportStar(require("./nodes/toc_section"), exports);
+__exportStar(require("./nodes/affiliation"), exports);
+__exportStar(require("./nodes/affiliation_list"), exports);
+__exportStar(require("./nodes/meta_section"), exports);
+__exportStar(require("./nodes/contributor_list"), exports);
+__exportStar(require("./nodes/contributor"), exports);
 exports.schema = new prosemirror_model_1.Schema({
     marks: {
         bold: marks_1.bold,
@@ -200,5 +210,10 @@ exports.schema = new prosemirror_model_1.Schema({
         text: text_1.text,
         toc_element: toc_element_1.tocElement,
         toc_section: toc_section_1.tocSection,
+        affiliation: affiliation_1.affiliation,
+        meta_section: meta_section_1.metaSection,
+        affiliation_list: affiliation_list_1.affiliationList,
+        contributor_list: contributor_list_1.contributorList,
+        contributor: contributor_1.contributor,
     },
 });

package/dist/cjs/schema/nodes/affiliation.js

@@ -0,0 +1,23 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.isAffiliationNode = exports.affiliation = void 0;
+exports.affiliation = {
+    attrs: {
+        id: { default: '' },
+        institution: { default: '' },
+        department: { default: '' },
+        addressLine1: { default: '' },
+        addressLine2: { default: '' },
+        addressLine3: { default: '' },
+        postCode: { default: '' },
+        country: { default: '' },
+        email: {
+            default: {
+                href: undefined,
+                text: undefined,
+            },
+        },
+    },
+};
+const isAffiliationNode = (node) => node.type === node.type.schema.nodes.affiliation;
+exports.isAffiliationNode = isAffiliationNode;

package/dist/cjs/schema/nodes/affiliation_list.js

@@ -0,0 +1,10 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.affiliationList = void 0;
+exports.affiliationList = {
+    content: 'affiliation*',
+    attrs: {
+        id: { default: 'AFFILIATION_LIST' },
+    },
+    toDOM: () => ['section', 0],
+};

package/dist/cjs/schema/nodes/contributor.js

@@ -0,0 +1,15 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.contributor = void 0;
+exports.contributor = {
+    attrs: {
+        id: { default: '' },
+        role: { default: '' },
+        affiliations: { default: [] },
+        bibliographicName: { default: {} },
+        userID: { default: '' },
+        invitationID: { default: '' },
+        isCorresponding: { default: undefined },
+        ORCIDIdentifier: { default: '' },
+    },
+};

package/dist/cjs/schema/nodes/contributor_list.js

@@ -0,0 +1,10 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.contributorList = void 0;
+exports.contributorList = {
+    content: 'contributor*',
+    attrs: {
+        id: { default: 'CONTRIBUTOR_LIST' },
+    },
+    toDOM: () => ['section', 0],
+};

package/dist/cjs/schema/nodes/manuscript.js

@@ -17,7 +17,7 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.manuscript = void 0;
 exports.manuscript = {
-    content: '(section | sections)+ comment_list',
+    content: '(section | sections)+ meta_section',
     attrs: {
         id: { default: '' },
     },

package/dist/cjs/schema/nodes/meta_section.js

@@ -0,0 +1,26 @@
+"use strict";
+/*!
+ * © 2019 Atypon Systems LLC
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.metaSection = void 0;
+exports.metaSection = {
+    content: 'affiliation_list contributor_list comment_list',
+    attrs: {
+        id: { default: 'META_SECTION' },
+    },
+    group: 'block sections',
+    toDOM: () => ['section', 0],
+};

package/dist/cjs/transformer/decode.js

@@ -60,6 +60,8 @@ exports.getModelsByType = getModelsByType;
 const sortSectionsByPriority = (a, b) => a.priority === b.priority ? 0 : Number(a.priority) - Number(b.priority);
 exports.sortSectionsByPriority = sortSectionsByPriority;
 const getSections = (modelMap) => (0, exports.getModelsByType)(modelMap, json_schema_1.ObjectTypes.Section).sort(exports.sortSectionsByPriority);
+const getAffiliations = (modelMap) => (0, exports.getModelsByType)(modelMap, json_schema_1.ObjectTypes.Affiliation);
+const getContributors = (modelMap) => (0, exports.getModelsByType)(modelMap, json_schema_1.ObjectTypes.Contributor);
 const isManuscriptNode = (model) => model !== null;
 exports.isManuscriptNode = isManuscriptNode;
 const isParagraphElement = (0, object_types_1.hasObjectType)(json_schema_1.ObjectTypes.ParagraphElement);
@@ -69,6 +71,46 @@ const hasParentSection = (id) => (section) => section.path &&
     section.path.length > 1 &&
     section.path[section.path.length - 2] === id;
 class Decoder {
+    createAffiliationListNode() {
+        const affiliationNodes = getAffiliations(this.modelMap)
+            .map((affiliation) => this.decode(affiliation))
+            .filter(Boolean);
+        return schema_1.schema.nodes.affiliation_list.createAndFill({}, affiliationNodes);
+    }
+    createContributorListNode() {
+        const contributorNodes = getContributors(this.modelMap)
+            .map((contributor) => this.decode(contributor))
+            .filter(Boolean);
+        return schema_1.schema.nodes.contributor_list.createAndFill({}, contributorNodes);
+    }
+    createMetaSectionNode() {
+        const affiliationListNode = this.createAffiliationListNode();
+        const contributorListNode = this.createContributorListNode();
+        const commentListNode = this.createCommentListNode();
+        return schema_1.schema.nodes.meta_section.createAndFill({}, [
+            affiliationListNode,
+            contributorListNode,
+            commentListNode,
+        ]);
+    }
+    createCommentListNode() {
+        return schema_1.schema.nodes.comment_list.createAndFill({}, [
+            ...this.comments.values(),
+        ]);
+    }
+    createRootSectionNodes() {
+        let rootSections = getSections(this.modelMap).filter((section) => !section.path || section.path.length <= 1);
+        rootSections = this.addGeneratedLabels(rootSections);
+        const rootSectionNodes = rootSections
+            .map(this.decode)
+            .filter(exports.isManuscriptNode);
+        if (!rootSectionNodes.length) {
+            rootSectionNodes.push(schema_1.schema.nodes.section.createAndFill({
+                id: (0, id_1.generateNodeID)(schema_1.schema.nodes.section),
+            }));
+        }
+        return rootSectionNodes;
+    }
     createCommentsNode(model) {
         const comments = [];
         for (const comment of this.getComments(model)) {
@@ -550,6 +592,32 @@ class Decoder {
                     originalText: model.originalText,
                 });
             },
+            [json_schema_1.ObjectTypes.Affiliation]: (data) => {
+                const model = data;
+                return schema_1.schema.nodes.affiliation.create({
+                    id: model._id,
+                    institution: model.institution,
+                    addressLine1: model.addressLine1,
+                    addressLine2: model.addressLine2,
+                    addressLine3: model.addressLine3,
+                    postCode: model.postCode,
+                    country: model.country,
+                    email: model.email,
+                });
+            },
+            [json_schema_1.ObjectTypes.Contributor]: (data) => {
+                const model = data;
+                return schema_1.schema.nodes.contributor.create({
+                    id: model._id,
+                    role: model.role,
+                    affiliations: model.affiliations,
+                    bibliographicName: model.bibliographicName,
+                    userID: model.userID,
+                    invitationID: model.invitationID,
+                    isCorresponding: model.isCorresponding,
+                    ORCIDIdentifier: model.ORCIDIdentifier,
+                });
+            },
         };
         this.decode = (model) => {
             if (!this.creators[model.objectType]) {
@@ -560,21 +628,9 @@ class Decoder {
         };
         this.getModel = (id) => this.modelMap.get(id);
         this.createArticleNode = (manuscriptID) => {
-            let rootSections = getSections(this.modelMap).filter((section) => !section.path || section.path.length <= 1);
-            rootSections = this.addGeneratedLabels(rootSections);
-            const rootSectionNodes = rootSections
-                .map(this.decode)
-                .filter(exports.isManuscriptNode);
-            if (!rootSectionNodes.length) {
-                rootSectionNodes.push(schema_1.schema.nodes.section.createAndFill({
-                    id: (0, id_1.generateNodeID)(schema_1.schema.nodes.section),
-                }));
-            }
-            const contents = rootSectionNodes;
-            const comments = schema_1.schema.nodes.comment_list.createAndFill({}, [
-                ...this.comments.values(),
-            ]);
-            contents.push(comments);
+            const rootSectionNodes = this.createRootSectionNodes();
+            const metaSectionNode = this.createMetaSectionNode();
+            const contents = [...rootSectionNodes, metaSectionNode];
             return schema_1.schema.nodes.manuscript.create({
                 id: manuscriptID || this.getManuscriptID(),
             }, contents);

package/dist/cjs/transformer/encode.js

@@ -500,6 +500,24 @@ const encoders = {
             .map((childNode) => childNode.attrs.id)
             .filter((id) => id),
     }),
+    affiliation: (node) => ({
+        institution: node.attrs.institution,
+        addressLine1: node.attrs.addressLine1,
+        addressLine2: node.attrs.addressLine2,
+        addressLine3: node.attrs.addressLine3,
+        postCode: node.attrs.postCode,
+        country: node.attrs.country,
+        email: node.attrs.email,
+    }),
+    contributor: (node) => ({
+        role: node.attrs.role,
+        affiliations: node.attrs.affiliations,
+        bibliographicName: node.attrs.bibliographicName,
+        userID: node.attrs.userID,
+        invitationID: node.attrs.invitationID,
+        isCorresponding: node.attrs.isCorresponding,
+        ORCIDIdentifier: node.attrs.ORCIDIdentifier,
+    }),
 };
 const modelData = (node, parent, path, priority) => {
     const encoder = encoders[node.type.name];
@@ -539,7 +557,7 @@ const encode = (node) => {
         if ((0, schema_1.isHighlightMarkerNode)(child)) {
             return;
         }
-        if (child.type === schema_1.schema.nodes.comment_list) {
+        if (child.type === schema_1.schema.nodes.meta_section) {
             return;
         }
         if (placeholders.includes(child.type.name)) {
@@ -553,14 +571,20 @@ const encode = (node) => {
         child.forEach(addModel(path.concat(child.attrs.id), child));
     };
     node.forEach((cNode) => {
-        if (cNode.type === schema_1.schema.nodes.comment_list) {
-            cNode.forEach((child) => {
-                const { model } = (0, exports.modelFromNode)(child, cNode, [], priority);
-                models.set(model._id, model);
-            });
+        if (cNode.type === schema_1.schema.nodes.meta_section) {
+            processMetaSectionNode(cNode, models, priority);
         }
     });
     node.forEach(addModel([], node));
     return models;
 };
 exports.encode = encode;
+const processMetaSectionNode = (node, models, priority) => {
+    node.descendants((child) => {
+        if ((!child.content || child.content.size === 0) &&
+            node_types_1.nodeTypesMap.get(child.type)) {
+            const { model } = (0, exports.modelFromNode)(child, node, [], priority);
+            models.set(model._id, model);
+        }
+    });
+};

package/dist/cjs/transformer/html.js

@@ -260,7 +260,7 @@ class HTMLTransformer {
                 };
                 return ['span', attrs];
             };
-            nodes.comment_list = () => '';
+            nodes.meta_section = () => '';
             const serializer = new prosemirror_model_1.DOMSerializer(nodes, marks);
             return serializer.serializeFragment(fragment, { document });
         };

package/dist/cjs/transformer/node-types.js

@@ -53,7 +53,9 @@ exports.nodeTypesMap = new Map([
     [schema_1.schema.nodes.table_element, json_schema_1.ObjectTypes.TableElement],
     [schema_1.schema.nodes.toc_element, json_schema_1.ObjectTypes.TOCElement],
     [schema_1.schema.nodes.toc_section, json_schema_1.ObjectTypes.Section],
-    [schema_1.schema.nodes.comment_list, json_schema_1.ObjectTypes.MetaSection],
+    [schema_1.schema.nodes.meta_section, json_schema_1.ObjectTypes.MetaSection],
+    [schema_1.schema.nodes.affiliation, json_schema_1.ObjectTypes.Affiliation],
+    [schema_1.schema.nodes.contributor, json_schema_1.ObjectTypes.Contributor],
 ]);
 const isExecutableNodeType = (type) => (0, schema_1.hasGroup)(type, schema_1.GROUP_EXECUTABLE);
 exports.isExecutableNodeType = isExecutableNodeType;

package/dist/es/jats/jats-exporter.js

@@ -591,6 +591,11 @@ export class JATSExporter {
         this.createSerializer = () => {
             const getModel = (id) => id ? this.modelMap.get(id) : undefined;
             const nodes = {
+                contributor_list: () => '',
+                contributor: () => '',
+                affiliation_list: () => '',
+                affiliation: () => '',
+                meta_section: () => '',
                 attribution: () => ['attrib', 0],
                 bibliography_element: () => '',
                 bibliography_item: () => '',

package/dist/es/schema/index.js

@@ -15,6 +15,8 @@
  */
 import { Schema } from 'prosemirror-model';
 import { bold, code, italic, smallcaps, strikethrough, styled, subscript, superscript, tracked_delete, tracked_insert, underline, } from './marks';
+import { affiliation } from './nodes/affiliation';
+import { affiliationList } from './nodes/affiliation_list';
 import { attribution } from './nodes/attribution';
 import { bibliographyElement } from './nodes/bibliography_element';
 import { bibliographyItem } from './nodes/bibliography_item';
@@ -25,6 +27,8 @@ import { captionTitle } from './nodes/caption_title';
 import { citation } from './nodes/citation';
 import { comment } from './nodes/comment';
 import { commentList } from './nodes/comment_list';
+import { contributor } from './nodes/contributor';
+import { contributorList } from './nodes/contributor_list';
 import { crossReference } from './nodes/cross_reference';
 import { doc } from './nodes/doc';
 import { equation } from './nodes/equation';
@@ -49,6 +53,7 @@ import { bulletList, listItem, orderedList } from './nodes/list';
 import { listing } from './nodes/listing';
 import { listingElement } from './nodes/listing_element';
 import { manuscript } from './nodes/manuscript';
+import { metaSection } from './nodes/meta_section';
 import { missingFigure } from './nodes/missing_figure';
 import { paragraph } from './nodes/paragraph';
 import { placeholder } from './nodes/placeholder';
@@ -113,6 +118,11 @@ export * from './nodes/table_row';
 export * from './nodes/text';
 export * from './nodes/toc_element';
 export * from './nodes/toc_section';
+export * from './nodes/affiliation';
+export * from './nodes/affiliation_list';
+export * from './nodes/meta_section';
+export * from './nodes/contributor_list';
+export * from './nodes/contributor';
 export const schema = new Schema({
     marks: {
         bold,
@@ -183,5 +193,10 @@ export const schema = new Schema({
         text,
         toc_element: tocElement,
         toc_section: tocSection,
+        affiliation,
+        meta_section: metaSection,
+        affiliation_list: affiliationList,
+        contributor_list: contributorList,
+        contributor: contributor,
     },
 });

package/dist/es/schema/nodes/affiliation.js

@@ -0,0 +1,19 @@
+export const affiliation = {
+    attrs: {
+        id: { default: '' },
+        institution: { default: '' },
+        department: { default: '' },
+        addressLine1: { default: '' },
+        addressLine2: { default: '' },
+        addressLine3: { default: '' },
+        postCode: { default: '' },
+        country: { default: '' },
+        email: {
+            default: {
+                href: undefined,
+                text: undefined,
+            },
+        },
+    },
+};
+export const isAffiliationNode = (node) => node.type === node.type.schema.nodes.affiliation;

package/dist/es/schema/nodes/affiliation_list.js

@@ -0,0 +1,7 @@
+export const affiliationList = {
+    content: 'affiliation*',
+    attrs: {
+        id: { default: 'AFFILIATION_LIST' },
+    },
+    toDOM: () => ['section', 0],
+};

package/dist/es/schema/nodes/contributor.js

@@ -0,0 +1,12 @@
+export const contributor = {
+    attrs: {
+        id: { default: '' },
+        role: { default: '' },
+        affiliations: { default: [] },
+        bibliographicName: { default: {} },
+        userID: { default: '' },
+        invitationID: { default: '' },
+        isCorresponding: { default: undefined },
+        ORCIDIdentifier: { default: '' },
+    },
+};

package/dist/es/schema/nodes/contributor_list.js

@@ -0,0 +1,7 @@
+export const contributorList = {
+    content: 'contributor*',
+    attrs: {
+        id: { default: 'CONTRIBUTOR_LIST' },
+    },
+    toDOM: () => ['section', 0],
+};

package/dist/es/schema/nodes/manuscript.js

@@ -14,7 +14,7 @@
  * limitations under the License.
  */
 export const manuscript = {
-    content: '(section | sections)+ comment_list',
+    content: '(section | sections)+ meta_section',
     attrs: {
         id: { default: '' },
     },

package/dist/es/schema/nodes/meta_section.js

@@ -0,0 +1,23 @@
+/*!
+ * © 2019 Atypon Systems LLC
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+export const metaSection = {
+    content: 'affiliation_list contributor_list comment_list',
+    attrs: {
+        id: { default: 'META_SECTION' },
+    },
+    group: 'block sections',
+    toDOM: () => ['section', 0],
+};

package/dist/es/transformer/decode.js

@@ -51,6 +51,8 @@ export const getModelsByType = (modelMap, objectType) => {
 };
 export const sortSectionsByPriority = (a, b) => a.priority === b.priority ? 0 : Number(a.priority) - Number(b.priority);
 const getSections = (modelMap) => getModelsByType(modelMap, ObjectTypes.Section).sort(sortSectionsByPriority);
+const getAffiliations = (modelMap) => getModelsByType(modelMap, ObjectTypes.Affiliation);
+const getContributors = (modelMap) => getModelsByType(modelMap, ObjectTypes.Contributor);
 export const isManuscriptNode = (model) => model !== null;
 const isParagraphElement = hasObjectType(ObjectTypes.ParagraphElement);
 const isFootnote = hasObjectType(ObjectTypes.Footnote);
@@ -59,6 +61,46 @@ const hasParentSection = (id) => (section) => section.path &&
     section.path.length > 1 &&
     section.path[section.path.length - 2] === id;
 export class Decoder {
+    createAffiliationListNode() {
+        const affiliationNodes = getAffiliations(this.modelMap)
+            .map((affiliation) => this.decode(affiliation))
+            .filter(Boolean);
+        return schema.nodes.affiliation_list.createAndFill({}, affiliationNodes);
+    }
+    createContributorListNode() {
+        const contributorNodes = getContributors(this.modelMap)
+            .map((contributor) => this.decode(contributor))
+            .filter(Boolean);
+        return schema.nodes.contributor_list.createAndFill({}, contributorNodes);
+    }
+    createMetaSectionNode() {
+        const affiliationListNode = this.createAffiliationListNode();
+        const contributorListNode = this.createContributorListNode();
+        const commentListNode = this.createCommentListNode();
+        return schema.nodes.meta_section.createAndFill({}, [
+            affiliationListNode,
+            contributorListNode,
+            commentListNode,
+        ]);
+    }
+    createCommentListNode() {
+        return schema.nodes.comment_list.createAndFill({}, [
+            ...this.comments.values(),
+        ]);
+    }
+    createRootSectionNodes() {
+        let rootSections = getSections(this.modelMap).filter((section) => !section.path || section.path.length <= 1);
+        rootSections = this.addGeneratedLabels(rootSections);
+        const rootSectionNodes = rootSections
+            .map(this.decode)
+            .filter(isManuscriptNode);
+        if (!rootSectionNodes.length) {
+            rootSectionNodes.push(schema.nodes.section.createAndFill({
+                id: generateNodeID(schema.nodes.section),
+            }));
+        }
+        return rootSectionNodes;
+    }
     createCommentsNode(model) {
         const comments = [];
         for (const comment of this.getComments(model)) {
@@ -540,6 +582,32 @@ export class Decoder {
                     originalText: model.originalText,
                 });
             },
+            [ObjectTypes.Affiliation]: (data) => {
+                const model = data;
+                return schema.nodes.affiliation.create({
+                    id: model._id,
+                    institution: model.institution,
+                    addressLine1: model.addressLine1,
+                    addressLine2: model.addressLine2,
+                    addressLine3: model.addressLine3,
+                    postCode: model.postCode,
+                    country: model.country,
+                    email: model.email,
+                });
+            },
+            [ObjectTypes.Contributor]: (data) => {
+                const model = data;
+                return schema.nodes.contributor.create({
+                    id: model._id,
+                    role: model.role,
+                    affiliations: model.affiliations,
+                    bibliographicName: model.bibliographicName,
+                    userID: model.userID,
+                    invitationID: model.invitationID,
+                    isCorresponding: model.isCorresponding,
+                    ORCIDIdentifier: model.ORCIDIdentifier,
+                });
+            },
         };
         this.decode = (model) => {
             if (!this.creators[model.objectType]) {
@@ -550,21 +618,9 @@ export class Decoder {
         };
         this.getModel = (id) => this.modelMap.get(id);
         this.createArticleNode = (manuscriptID) => {
-            let rootSections = getSections(this.modelMap).filter((section) => !section.path || section.path.length <= 1);
-            rootSections = this.addGeneratedLabels(rootSections);
-            const rootSectionNodes = rootSections
-                .map(this.decode)
-                .filter(isManuscriptNode);
-            if (!rootSectionNodes.length) {
-                rootSectionNodes.push(schema.nodes.section.createAndFill({
-                    id: generateNodeID(schema.nodes.section),
-                }));
-            }
-            const contents = rootSectionNodes;
-            const comments = schema.nodes.comment_list.createAndFill({}, [
-                ...this.comments.values(),
-            ]);
-            contents.push(comments);
+            const rootSectionNodes = this.createRootSectionNodes();
+            const metaSectionNode = this.createMetaSectionNode();
+            const contents = [...rootSectionNodes, metaSectionNode];
             return schema.nodes.manuscript.create({
                 id: manuscriptID || this.getManuscriptID(),
             }, contents);

package/dist/es/transformer/encode.js

@@ -492,6 +492,24 @@ const encoders = {
             .map((childNode) => childNode.attrs.id)
             .filter((id) => id),
     }),
+    affiliation: (node) => ({
+        institution: node.attrs.institution,
+        addressLine1: node.attrs.addressLine1,
+        addressLine2: node.attrs.addressLine2,
+        addressLine3: node.attrs.addressLine3,
+        postCode: node.attrs.postCode,
+        country: node.attrs.country,
+        email: node.attrs.email,
+    }),
+    contributor: (node) => ({
+        role: node.attrs.role,
+        affiliations: node.attrs.affiliations,
+        bibliographicName: node.attrs.bibliographicName,
+        userID: node.attrs.userID,
+        invitationID: node.attrs.invitationID,
+        isCorresponding: node.attrs.isCorresponding,
+        ORCIDIdentifier: node.attrs.ORCIDIdentifier,
+    }),
 };
 const modelData = (node, parent, path, priority) => {
     const encoder = encoders[node.type.name];
@@ -530,7 +548,7 @@ export const encode = (node) => {
         if (isHighlightMarkerNode(child)) {
             return;
         }
-        if (child.type === schema.nodes.comment_list) {
+        if (child.type === schema.nodes.meta_section) {
             return;
         }
         if (placeholders.includes(child.type.name)) {
@@ -544,13 +562,19 @@ export const encode = (node) => {
         child.forEach(addModel(path.concat(child.attrs.id), child));
     };
     node.forEach((cNode) => {
-        if (cNode.type === schema.nodes.comment_list) {
-            cNode.forEach((child) => {
-                const { model } = modelFromNode(child, cNode, [], priority);
-                models.set(model._id, model);
-            });
+        if (cNode.type === schema.nodes.meta_section) {
+            processMetaSectionNode(cNode, models, priority);
         }
     });
     node.forEach(addModel([], node));
     return models;
 };
+const processMetaSectionNode = (node, models, priority) => {
+    node.descendants((child) => {
+        if ((!child.content || child.content.size === 0) &&
+            nodeTypesMap.get(child.type)) {
+            const { model } = modelFromNode(child, node, [], priority);
+            models.set(model._id, model);
+        }
+    });
+};

package/dist/es/transformer/html.js

@@ -254,7 +254,7 @@ export class HTMLTransformer {
                 };
                 return ['span', attrs];
             };
-            nodes.comment_list = () => '';
+            nodes.meta_section = () => '';
             const serializer = new DOMSerializer(nodes, marks);
             return serializer.serializeFragment(fragment, { document });
         };

package/dist/es/transformer/node-types.js

@@ -50,7 +50,9 @@ export const nodeTypesMap = new Map([
     [schema.nodes.table_element, ObjectTypes.TableElement],
     [schema.nodes.toc_element, ObjectTypes.TOCElement],
     [schema.nodes.toc_section, ObjectTypes.Section],
-    [schema.nodes.comment_list, ObjectTypes.MetaSection],
+    [schema.nodes.meta_section, ObjectTypes.MetaSection],
+    [schema.nodes.affiliation, ObjectTypes.Affiliation],
+    [schema.nodes.contributor, ObjectTypes.Contributor],
 ]);
 export const isExecutableNodeType = (type) => hasGroup(type, GROUP_EXECUTABLE);
 export const isElementNodeType = (type) => hasGroup(type, GROUP_ELEMENT);

package/dist/types/schema/index.d.ts

@@ -64,4 +64,9 @@ export * from './nodes/table_row';
 export * from './nodes/text';
 export * from './nodes/toc_element';
 export * from './nodes/toc_section';
+export * from './nodes/affiliation';
+export * from './nodes/affiliation_list';
+export * from './nodes/meta_section';
+export * from './nodes/contributor_list';
+export * from './nodes/contributor';
 export declare const schema: Schema<Nodes, Marks>;

package/dist/types/schema/nodes/affiliation.d.ts

@@ -0,0 +1,23 @@
+import { NodeSpec } from 'prosemirror-model';
+import { ManuscriptNode } from '../types';
+interface Email {
+    href: string;
+    text: string;
+}
+interface Attrs {
+    id: string;
+    institution: string;
+    department: string;
+    addressLine1: string;
+    addressLine2: string;
+    addressLine3: string;
+    postCode: string;
+    country: string;
+    email: Email;
+}
+export interface AffiliationNode extends ManuscriptNode {
+    attrs: Attrs;
+}
+export declare const affiliation: NodeSpec;
+export declare const isAffiliationNode: (node: ManuscriptNode) => node is AffiliationNode;
+export {};

package/dist/types/schema/nodes/affiliation_list.d.ts

@@ -0,0 +1,10 @@
+import { NodeSpec } from 'prosemirror-model';
+import { ManuscriptNode } from '../types';
+interface Attrs {
+    id: string;
+}
+export interface AffiliationListNode extends ManuscriptNode {
+    attrs: Attrs;
+}
+export declare const affiliationList: NodeSpec;
+export {};

package/dist/types/schema/nodes/contributor.d.ts

@@ -0,0 +1,18 @@
+import { Affiliation, BibliographicName } from '@manuscripts/json-schema';
+import { NodeSpec } from 'prosemirror-model';
+import { ManuscriptNode } from '../types';
+interface Attrs {
+    id: string;
+    role: string;
+    affiliations: Affiliation[];
+    bibliographicName: BibliographicName;
+    userID: string;
+    invitationID: string;
+    isCorresponding: boolean;
+    ORCIDIdentifier: string;
+}
+export interface ContributorNode extends ManuscriptNode {
+    attrs: Attrs;
+}
+export declare const contributor: NodeSpec;
+export {};

package/dist/types/schema/nodes/contributor_list.d.ts

@@ -0,0 +1,10 @@
+import { NodeSpec } from 'prosemirror-model';
+import { ManuscriptNode } from '../types';
+interface Attrs {
+    id: string;
+}
+export interface ContributorListNode extends ManuscriptNode {
+    attrs: Attrs;
+}
+export declare const contributorList: NodeSpec;
+export {};

package/dist/types/schema/nodes/meta_section.d.ts

@@ -0,0 +1,25 @@
+/*!
+ * © 2019 Atypon Systems LLC
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+import { NodeSpec } from 'prosemirror-model';
+import { ManuscriptNode } from '../types';
+interface Attrs {
+    id: string;
+}
+export interface MetaSectionNode extends ManuscriptNode {
+    attrs: Attrs;
+}
+export declare const metaSection: NodeSpec;
+export {};

package/dist/types/schema/types.d.ts

@@ -17,7 +17,7 @@ import { Fragment, Mark as ProsemirrorMark, MarkType, Node as ProsemirrorNode, N
 import { EditorState, NodeSelection, Plugin, TextSelection, Transaction } from 'prosemirror-state';
 import { EditorView, NodeView } from 'prosemirror-view';
 export type Marks = 'bold' | 'code' | 'italic' | 'smallcaps' | 'strikethrough' | 'styled' | 'subscript' | 'superscript' | 'underline' | 'tracked_insert' | 'tracked_delete';
-export type Nodes = 'attribution' | 'bibliography_item' | 'bibliography_element' | 'bibliography_section' | 'blockquote_element' | 'bullet_list' | 'caption' | 'caption_title' | 'comment' | 'comment_list' | 'citation' | 'cross_reference' | 'doc' | 'equation' | 'equation_element' | 'figcaption' | 'figure' | 'graphical_abstract_section' | 'figure_element' | 'footnote' | 'footnotes_element' | 'footnotes_section' | 'hard_break' | 'highlight_marker' | 'inline_equation' | 'inline_footnote' | 'keyword' | 'keywords_element' | 'keywords_group' | 'keywords_section' | 'link' | 'list_item' | 'listing' | 'listing_element' | 'manuscript' | 'missing_figure' | 'ordered_list' | 'paragraph' | 'placeholder' | 'placeholder_element' | 'pullquote_element' | 'section' | 'section_label' | 'section_title' | 'section_title_plain' | 'table' | 'table_body' | 'table_cell' | 'table_element' | 'table_row' | 'table_colgroup' | 'table_col' | 'text' | 'toc_element' | 'toc_section';
+export type Nodes = 'attribution' | 'bibliography_item' | 'bibliography_element' | 'bibliography_section' | 'blockquote_element' | 'bullet_list' | 'caption' | 'caption_title' | 'comment' | 'comment_list' | 'citation' | 'cross_reference' | 'doc' | 'equation' | 'equation_element' | 'figcaption' | 'figure' | 'graphical_abstract_section' | 'figure_element' | 'footnote' | 'footnotes_element' | 'footnotes_section' | 'hard_break' | 'highlight_marker' | 'inline_equation' | 'inline_footnote' | 'keyword' | 'keywords_element' | 'keywords_group' | 'keywords_section' | 'link' | 'list_item' | 'listing' | 'listing_element' | 'manuscript' | 'missing_figure' | 'ordered_list' | 'paragraph' | 'placeholder' | 'placeholder_element' | 'pullquote_element' | 'section' | 'section_label' | 'section_title' | 'section_title_plain' | 'table' | 'table_body' | 'table_cell' | 'table_element' | 'table_row' | 'table_colgroup' | 'table_col' | 'text' | 'toc_element' | 'toc_section' | 'affiliation' | 'meta_section' | 'affiliation_list' | 'contributor_list' | 'contributor';
 export type ManuscriptSchema = Schema<Nodes, Marks>;
 export type ManuscriptEditorState = EditorState;
 export type ManuscriptEditorView = EditorView;

package/dist/types/transformer/decode.d.ts

@@ -25,6 +25,11 @@ export declare class Decoder {
     private readonly allowMissingElements;
     private comments;
     private creators;
+    private createAffiliationListNode;
+    private createContributorListNode;
+    private createMetaSectionNode;
+    private createCommentListNode;
+    private createRootSectionNodes;
     private createCommentsNode;
     private getComments;
     private extractListing;

package/package.json

@@ -1,7 +1,7 @@
 {
   "name": "@manuscripts/transform",
   "description": "ProseMirror transformer for Manuscripts applications",
-  "version": "1.3.8",
+  "version": "1.3.9",
   "repository": "github:Atypon-OpenSource/manuscripts-transform",
   "license": "Apache-2.0",
   "main": "dist/cjs",
@@ -83,4 +83,4 @@
     "prosemirror-state": "^1.4.2",
     "prosemirror-view": "^1.29.1"
   }
-}
+}