@manuscripts/transform 1.2.1 → 1.2.3

package/dist/cjs/jats/importer/jats-front-parser.js

@@ -21,39 +21,10 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.jatsFrontParser = void 0;
 const debug_1 = __importDefault(require("debug"));
 const builders_1 = require("../../transformer/builders");
-const bundles_1 = require("../../transformer/bundles");
-const bundles_data_1 = require("../../transformer/bundles-data");
 const jats_journal_meta_parser_1 = require("./jats-journal-meta-parser");
 const warn = (0, debug_1.default)('manuscripts-transform');
 const XLINK_NAMESPACE = 'http://www.w3.org/1999/xlink';
-const chooseBundle = async (issns) => {
-    const issnBundleIndex = await (0, bundles_data_1.loadIssnBundleIndex)();
-    for (const { ISSN } of issns) {
-        const normalizedIssn = ISSN.toUpperCase().replace(/[^0-9X]/g, '');
-        if (normalizedIssn in issnBundleIndex) {
-            return issnBundleIndex[normalizedIssn];
-        }
-    }
-};
 exports.jatsFrontParser = {
-    async loadJournalBundles(issns) {
-        if (issns.length === 0) {
-            return {
-                manuscript_bundle: undefined,
-                bundleNodes: [],
-            };
-        }
-        const bundleID = await chooseBundle(issns);
-        const bundlesMap = bundleID ? await (0, bundles_data_1.loadBundlesMap)() : undefined;
-        const bundle = bundleID && bundlesMap ? (0, bundles_1.createNewBundle)(bundleID, bundlesMap) : undefined;
-        const parentBundle = bundle && bundleID && bundlesMap
-            ? (0, bundles_1.createParentBundle)(bundle, bundlesMap)
-            : undefined;
-        return {
-            manuscript_bundle: bundle === null || bundle === void 0 ? void 0 : bundle._id,
-            bundleNodes: [parentBundle, bundle].filter((v) => v !== undefined),
-        };
-    },
     parseCounts(counts) {
         var _a, _b, _c, _d, _e;
         if (counts) {

package/dist/cjs/jats/importer/parse-jats-article.js

@@ -47,7 +47,6 @@ const parseJATSFront = async (front) => {
     var _a, _b, _c;
     const journalMeta = jats_front_parser_1.jatsFrontParser.parseJournal(front.querySelector('journal-meta'));
     const journal = Object.assign(Object.assign({}, (0, builders_1.buildJournal)()), journalMeta);
-    const { manuscript_bundle, bundleNodes } = await jats_front_parser_1.jatsFrontParser.loadJournalBundles(journal.ISSNs);
     const articleMeta = front.querySelector('article-meta');
     const title = (_a = articleMeta === null || articleMeta === void 0 ? void 0 : articleMeta.querySelector('title-group > article-title')) === null || _a === void 0 ? void 0 : _a.innerHTML;
     const subtitle = (_b = articleMeta === null || articleMeta === void 0 ? void 0 : articleMeta.querySelector('title-group > subtitle')) === null || _b === void 0 ? void 0 : _b.innerHTML;
@@ -74,11 +73,10 @@ const parseJATSFront = async (front) => {
     const supplements = jats_front_parser_1.jatsFrontParser.parseSupplements([
         ...front.querySelectorAll('article-meta > supplementary-material'),
     ]);
-    const manuscript = Object.assign(Object.assign(Object.assign(Object.assign({}, (0, builders_1.buildManuscript)()), manuscriptMeta), { bundle: manuscript_bundle, keywordIDs: manuscript_keywordIDs }), history);
+    const manuscript = Object.assign(Object.assign(Object.assign(Object.assign({}, (0, builders_1.buildManuscript)()), manuscriptMeta), { keywordIDs: manuscript_keywordIDs }), history);
     return {
         models: generateModelIDs([
             manuscript,
-            ...bundleNodes,
             ...keywords,
             ...affiliations,
             ...authors,
@@ -88,7 +86,6 @@ const parseJATSFront = async (front) => {
             journal,
             ...supplements,
         ]),
-        bundles: bundleNodes,
     };
 };
 exports.parseJATSFront = parseJATSFront;

package/dist/cjs/transformer/index.js

@@ -30,7 +30,6 @@ var __exportStar = (this && this.__exportStar) || function(m, exports) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 __exportStar(require("./builders"), exports);
-__exportStar(require("./bundles"), exports);
 __exportStar(require("./decode"), exports);
 __exportStar(require("./document-object-types"), exports);
 __exportStar(require("./encode"), exports);

package/dist/es/jats/importer/jats-front-parser.js

@@ -15,39 +15,10 @@
  */
 import debug from 'debug';
 import { buildAffiliation, buildBibliographicName, buildContributor, buildCorresp, buildFootnote, buildKeyword, buildKeywordGroup, buildSupplementaryMaterial, } from '../../transformer/builders';
-import { createNewBundle, createParentBundle } from '../../transformer/bundles';
-import { loadBundlesMap, loadIssnBundleIndex, } from '../../transformer/bundles-data';
 import { parseJournalMeta } from './jats-journal-meta-parser';
 const warn = debug('manuscripts-transform');
 const XLINK_NAMESPACE = 'http://www.w3.org/1999/xlink';
-const chooseBundle = async (issns) => {
-    const issnBundleIndex = await loadIssnBundleIndex();
-    for (const { ISSN } of issns) {
-        const normalizedIssn = ISSN.toUpperCase().replace(/[^0-9X]/g, '');
-        if (normalizedIssn in issnBundleIndex) {
-            return issnBundleIndex[normalizedIssn];
-        }
-    }
-};
 export const jatsFrontParser = {
-    async loadJournalBundles(issns) {
-        if (issns.length === 0) {
-            return {
-                manuscript_bundle: undefined,
-                bundleNodes: [],
-            };
-        }
-        const bundleID = await chooseBundle(issns);
-        const bundlesMap = bundleID ? await loadBundlesMap() : undefined;
-        const bundle = bundleID && bundlesMap ? createNewBundle(bundleID, bundlesMap) : undefined;
-        const parentBundle = bundle && bundleID && bundlesMap
-            ? createParentBundle(bundle, bundlesMap)
-            : undefined;
-        return {
-            manuscript_bundle: bundle === null || bundle === void 0 ? void 0 : bundle._id,
-            bundleNodes: [parentBundle, bundle].filter((v) => v !== undefined),
-        };
-    },
     parseCounts(counts) {
         var _a, _b, _c, _d, _e;
         if (counts) {

package/dist/es/jats/importer/parse-jats-article.js

@@ -44,7 +44,6 @@ export const parseJATSFront = async (front) => {
     var _a, _b, _c;
     const journalMeta = jatsFrontParser.parseJournal(front.querySelector('journal-meta'));
     const journal = Object.assign(Object.assign({}, buildJournal()), journalMeta);
-    const { manuscript_bundle, bundleNodes } = await jatsFrontParser.loadJournalBundles(journal.ISSNs);
     const articleMeta = front.querySelector('article-meta');
     const title = (_a = articleMeta === null || articleMeta === void 0 ? void 0 : articleMeta.querySelector('title-group > article-title')) === null || _a === void 0 ? void 0 : _a.innerHTML;
     const subtitle = (_b = articleMeta === null || articleMeta === void 0 ? void 0 : articleMeta.querySelector('title-group > subtitle')) === null || _b === void 0 ? void 0 : _b.innerHTML;
@@ -71,11 +70,10 @@ export const parseJATSFront = async (front) => {
     const supplements = jatsFrontParser.parseSupplements([
         ...front.querySelectorAll('article-meta > supplementary-material'),
     ]);
-    const manuscript = Object.assign(Object.assign(Object.assign(Object.assign({}, buildManuscript()), manuscriptMeta), { bundle: manuscript_bundle, keywordIDs: manuscript_keywordIDs }), history);
+    const manuscript = Object.assign(Object.assign(Object.assign(Object.assign({}, buildManuscript()), manuscriptMeta), { keywordIDs: manuscript_keywordIDs }), history);
     return {
         models: generateModelIDs([
             manuscript,
-            ...bundleNodes,
             ...keywords,
             ...affiliations,
             ...authors,
@@ -85,7 +83,6 @@ export const parseJATSFront = async (front) => {
             journal,
             ...supplements,
         ]),
-        bundles: bundleNodes,
     };
 };
 export const parseJATSReferences = (back, body, createElement) => {

package/dist/es/transformer/index.js

@@ -14,7 +14,6 @@
  * limitations under the License.
  */
 export * from './builders';
-export * from './bundles';
 export * from './decode';
 export * from './document-object-types';
 export * from './encode';

package/dist/types/jats/importer/jats-front-parser.d.ts

@@ -13,14 +13,9 @@
  * See the License for the specific language governing permissions and
  * limitations under the License.
  */
-import { Bundle, Journal, Keyword, KeywordGroup } from '@manuscripts/json-schema';
+import { Journal, Keyword, KeywordGroup } from '@manuscripts/json-schema';
 import { Build } from '../../transformer/builders';
-import { ISSN } from './jats-journal-meta-parser';
 export declare const jatsFrontParser: {
-    loadJournalBundles(issns: ISSN[]): Promise<{
-        manuscript_bundle: string | undefined;
-        bundleNodes: Bundle[];
-    }>;
     parseCounts(counts: Element | null | undefined): {
         wordCount: number | undefined;
         figureCount: number | undefined;

package/dist/types/jats/importer/parse-jats-article.d.ts

@@ -17,7 +17,6 @@ import { BibliographyItem, ElementsOrder, FootnotesOrder, Model } from '@manuscr
 import { ManuscriptNode } from '../../schema';
 export declare const parseJATSFront: (front: Element) => Promise<{
     models: Model[];
-    bundles: import("@manuscripts/json-schema").Bundle[];
 }>;
 export declare const parseJATSReferences: (back: Element | null, body: Element | null, createElement: (tagName: string) => HTMLElement) => {
     references: Model[];

package/dist/types/transformer/index.d.ts

@@ -14,7 +14,6 @@
  * limitations under the License.
  */
 export * from './builders';
-export * from './bundles';
 export * from './decode';
 export * from './document-object-types';
 export * from './encode';

package/package.json

@@ -1,7 +1,7 @@
 {
   "name": "@manuscripts/transform",
   "description": "ProseMirror transformer for Manuscripts applications",
-  "version": "1.2.1",
+  "version": "1.2.3",
   "repository": "github:Atypon-OpenSource/manuscripts-transform",
   "license": "Apache-2.0",
   "main": "dist/cjs",
@@ -29,7 +29,7 @@
     "version": "yarn build"
   },
   "dependencies": {
-    "@manuscripts/json-schema": "^2.0.0",
+    "@manuscripts/json-schema": "^2.0.1",
     "debug": "^4.3.4",
     "jszip": "^3.10.1",
     "mathjax-full": "^3.2.2",
@@ -43,7 +43,7 @@
     "@babel/preset-env": "^7.20.2",
     "@babel/preset-typescript": "^7.18.6",
     "@jats4r/dtds": "^0.0.8",
-    "@manuscripts/data": "^0.1.12",
+    "@manuscripts/data": "^1.0.2",
     "@manuscripts/eslint-config": "^0.5.1",
     "@manuscripts/examples": "^0.1.0",
     "@types/debug": "^4.1.7",
@@ -80,7 +80,7 @@
     "typescript": "^4.0.5"
   },
   "peerDependencies": {
-    "@manuscripts/data": "^0.1.12",
+    "@manuscripts/data": "^1.0.2",
     "prosemirror-model": "^1.18.3",
     "prosemirror-state": "^1.4.2",
     "prosemirror-view": "^1.29.1"

package/dist/cjs/transformer/bundles-data.js

@@ -1,36 +0,0 @@
-"use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.loadIssnBundleIndex = exports.loadBundlesMap = void 0;
-const loadBundlesMap = async () => {
-    const { default: bundles } = await Promise.resolve().then(() => __importStar(require('@manuscripts/data/dist/shared/bundles.json')));
-    return new Map(bundles.map((bundle) => [bundle._id, bundle]));
-};
-exports.loadBundlesMap = loadBundlesMap;
-const loadIssnBundleIndex = async () => {
-    const { default: issnBundleIndex } = await Promise.resolve().then(() => __importStar(require('@manuscripts/data/dist/shared/issn-bundle-index.json')));
-    return issnBundleIndex;
-};
-exports.loadIssnBundleIndex = loadIssnBundleIndex;

package/dist/cjs/transformer/bundles.js

@@ -1,32 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.createNewBundle = exports.createParentBundle = void 0;
-const manuscript_dependencies_1 = require("./manuscript-dependencies");
-const findBundleByURL = (url, bundles) => {
-    for (const bundle of bundles.values()) {
-        if (bundle.csl && bundle.csl['self-URL'] === url) {
-            return bundle;
-        }
-    }
-};
-const createParentBundle = (bundle, bundles) => {
-    if (bundle.csl) {
-        const parentURL = bundle.csl['independent-parent-URL'];
-        if (parentURL) {
-            const parentBundle = findBundleByURL(parentURL, bundles);
-            if (!parentBundle) {
-                throw new Error(`Bundle with URL not found: ${parentURL} `);
-            }
-            return (0, manuscript_dependencies_1.fromPrototype)(parentBundle);
-        }
-    }
-};
-exports.createParentBundle = createParentBundle;
-const createNewBundle = (bundleID, bundles) => {
-    const bundle = bundles.get(bundleID);
-    if (!bundle) {
-        throw new Error(`Bundle not found: ${bundleID}`);
-    }
-    return (0, manuscript_dependencies_1.fromPrototype)(bundle);
-};
-exports.createNewBundle = createNewBundle;

package/dist/es/transformer/bundles-data.js

@@ -1,8 +0,0 @@
-export const loadBundlesMap = async () => {
-    const { default: bundles } = await import('@manuscripts/data/dist/shared/bundles.json');
-    return new Map(bundles.map((bundle) => [bundle._id, bundle]));
-};
-export const loadIssnBundleIndex = async () => {
-    const { default: issnBundleIndex } = await import('@manuscripts/data/dist/shared/issn-bundle-index.json');
-    return issnBundleIndex;
-};

package/dist/es/transformer/bundles.js

@@ -1,27 +0,0 @@
-import { fromPrototype } from './manuscript-dependencies';
-const findBundleByURL = (url, bundles) => {
-    for (const bundle of bundles.values()) {
-        if (bundle.csl && bundle.csl['self-URL'] === url) {
-            return bundle;
-        }
-    }
-};
-export const createParentBundle = (bundle, bundles) => {
-    if (bundle.csl) {
-        const parentURL = bundle.csl['independent-parent-URL'];
-        if (parentURL) {
-            const parentBundle = findBundleByURL(parentURL, bundles);
-            if (!parentBundle) {
-                throw new Error(`Bundle with URL not found: ${parentURL} `);
-            }
-            return fromPrototype(parentBundle);
-        }
-    }
-};
-export const createNewBundle = (bundleID, bundles) => {
-    const bundle = bundles.get(bundleID);
-    if (!bundle) {
-        throw new Error(`Bundle not found: ${bundleID}`);
-    }
-    return fromPrototype(bundle);
-};

package/dist/types/transformer/bundles-data.d.ts

@@ -1,3 +0,0 @@
-import { Bundle } from '@manuscripts/json-schema';
-export declare const loadBundlesMap: () => Promise<Map<string, Bundle>>;
-export declare const loadIssnBundleIndex: () => Promise<Record<string, string>>;

package/dist/types/transformer/bundles.d.ts

@@ -1,3 +0,0 @@
-import { Bundle } from '@manuscripts/json-schema';
-export declare const createParentBundle: (bundle: Bundle, bundles: Map<string, Bundle>) => Bundle | undefined;
-export declare const createNewBundle: (bundleID: string, bundles: Map<string, Bundle>) => Bundle;