@manuscripts/style-guide 1.6.1 → 1.7.0

package/dist/cjs/components/Dialog.js

@@ -27,7 +27,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.Dialog = exports.Category = exports.MessageContainer = exports.ModalBody = void 0;
+exports.Dialog = exports.Category = exports.MessageContainer = exports.DialogModalBody = void 0;
 const AttentionRed_1 = __importDefault(require("@manuscripts/assets/react/AttentionRed"));
 const react_1 = __importDefault(require("react"));
 const styled_components_1 = __importDefault(require("styled-components"));
@@ -40,7 +40,7 @@ const Icon = styled_components_1.default.div `
   display: inline-flex;
   align-items: center;
 `;
-exports.ModalBody = styled_components_1.default.div `
+exports.DialogModalBody = styled_components_1.default.div `
   border-radius: ${(props) => props.theme.grid.radius.default};
   box-shadow: ${(props) => props.theme.shadow.dropShadow};
   background: ${(props) => props.theme.colors.background.primary};
@@ -121,7 +121,7 @@ class Dialog extends react_1.default.Component {
         const { actions, isOpen, header, message, category, children, confirmFieldText, className, } = this.props;
         const { primaryActionDisabled } = this.state;
         return (react_1.default.createElement(StyledModal_1.StyledModal, { isOpen: isOpen, onRequestClose: actions.onClose, shouldCloseOnOverlayClick: true, className: className },
-            react_1.default.createElement(exports.ModalBody, null,
+            react_1.default.createElement(exports.DialogModalBody, null,
                 react_1.default.createElement(HeaderContainer, null,
                     category === Category.error && (react_1.default.createElement(Icon, null,
                         react_1.default.createElement(AttentionRed_1.default, null))),

package/dist/cjs/components/FileManager/FileActions.js

@@ -76,7 +76,7 @@ const FileActions = ({ sectionType, handleDownload, handleReplace, handleDetach,
             showMove && (react_1.default.createElement(exports.FileAction, { onClick: () => setMoveDialogOpen(true) },
                 "Move to ",
                 move.sectionType)))),
-        showMove && (react_1.default.createElement(MoveFileConfirmationDialog, { isOpen: isMoveDialogOpen, close: () => setMoveDialogOpen(false), source: sectionType, target: move.sectionType, handleMove: move.handler })))) : (react_1.default.createElement(react_1.default.Fragment, null));
+        showMove && (react_1.default.createElement(MoveFileConfirmationDialog, { "data-cy": "file-move-confirm-dialog", isOpen: isMoveDialogOpen, close: () => setMoveDialogOpen(false), source: sectionType, target: move.sectionType, handleMove: move.handler })))) : (react_1.default.createElement(react_1.default.Fragment, null));
 };
 exports.FileActions = FileActions;
 const MoveFileConfirmationDialog = ({ isOpen, close, source, target, handleMove }) => {

package/dist/cjs/components/FileManager/FileManager.js

@@ -41,7 +41,7 @@ const FileManager = ({ files, fileManagement, modelMap, saveModel, deleteModel,
         react_1.default.createElement(DragLayer_1.DragLayer, null),
         react_1.default.createElement(exports.PermissionsContext.Provider, { value: can },
             react_1.default.createElement(InspectorSection_1.InspectorSection, { title: 'Files', contentStyles: { margin: '24px 16px' } },
-                react_1.default.createElement(Inspector_1.InspectorTabs, { defaultIndex: 0, style: { overflow: 'visible' } },
+                react_1.default.createElement(Inspector_1.InspectorTabs, { defaultIndex: 0, "data-cy": "files-tabs", style: { overflow: 'visible' } },
                     react_1.default.createElement(Inspector_1.InspectorTabList, null,
                         react_1.default.createElement(Inspector_1.InspectorTab, { "data-for": "inline", "data-tip": true }, "Inline files"),
                         react_1.default.createElement(Tooltip_1.Tooltip, { id: "inline", place: "bottom", offset: { bottom: -11 }, effect: "solid", className: "tooltip" }, "Files that can be found inline in the manuscript."),
@@ -51,10 +51,10 @@ const FileManager = ({ files, fileManagement, modelMap, saveModel, deleteModel,
                         react_1.default.createElement(Tooltip_1.Tooltip, { id: "other", place: "bottom", offset: { bottom: -11 }, effect: "solid", className: "tooltip" }, "Files excluded from the final submission.")),
                     react_1.default.createElement(Inspector_1.InspectorTabPanels, { style: { overflowY: 'visible', position: 'relative' } },
                         react_1.default.createElement(Inspector_1.InspectorTabPanel, null,
-                            react_1.default.createElement(InlineFilesSection_1.InlineFilesSection, { elements: inlineFiles, isEditor: enableDragAndDrop })),
+                            react_1.default.createElement(InlineFilesSection_1.InlineFilesSection, { "data-cy": "inline-files", elements: inlineFiles, isEditor: enableDragAndDrop })),
                         react_1.default.createElement(Inspector_1.InspectorTabPanel, null,
-                            react_1.default.createElement(SupplementsSection_1.SupplementsSection, { supplements: supplements })),
+                            react_1.default.createElement(SupplementsSection_1.SupplementsSection, { "data-cy": "supplements-files", supplements: supplements })),
                         react_1.default.createElement(Inspector_1.InspectorTabPanel, null,
-                            react_1.default.createElement(OtherFilesSection_1.OtherFilesSection, { files: otherFiles }))))))));
+                            react_1.default.createElement(OtherFilesSection_1.OtherFilesSection, { "data-cy": "other-files", files: otherFiles }))))))));
 };
 exports.FileManager = FileManager;

package/dist/cjs/components/FileManager/FileUploader.js

@@ -67,7 +67,7 @@ const FileUploader = ({ handler }) => {
         }),
     });
     const isActive = canDrop && isOver;
-    return (react_1.default.createElement(Container, { ref: dropRef, active: isActive, onClick: openFileDialog },
+    return (react_1.default.createElement(Container, { ref: dropRef, "data-cy": "file-uploader", active: isActive, onClick: openFileDialog },
         react_1.default.createElement("input", { ref: fileInputRef, type: "file", style: { display: 'none' }, onChange: (e) => handleChange(e), value: '' }),
         "Drag or click to upload a new file"));
 };

package/dist/cjs/components/FileManager/InlineFilesSection.js

@@ -79,7 +79,7 @@ const InlineFilesSection = ({ elements, isEditor }) => {
             react_1.default.createElement(ElementLabelContainer, null,
                 (0, util_1.getFileTypeIcon)(element.type),
                 react_1.default.createElement(ElementLabel, null, element.label)),
-            react_1.default.createElement(ElementFilesContainer, null, (_a = element.files) === null || _a === void 0 ? void 0 : _a.map((file) => (react_1.default.createElement(ElementFile, { key: file.modelId, file: file, handleReplace: (f) => __awaiter(void 0, void 0, void 0, function* () { return yield replace(element, file, f); }), handleDetach: () => __awaiter(void 0, void 0, void 0, function* () { return yield detach(element, file); }), handleDownload: () => fileManagement.download(file) }))))));
+            react_1.default.createElement(ElementFilesContainer, { "data-cy": "file-elements-container" }, (_a = element.files) === null || _a === void 0 ? void 0 : _a.map((file) => (react_1.default.createElement(ElementFile, { key: file.modelId, file: file, handleReplace: (f) => __awaiter(void 0, void 0, void 0, function* () { return yield replace(element, file, f); }), handleDetach: () => __awaiter(void 0, void 0, void 0, function* () { return yield detach(element, file); }), handleDownload: () => fileManagement.download(file) }))))));
     })));
 };
 exports.InlineFilesSection = InlineFilesSection;
@@ -87,7 +87,7 @@ const ElementFile = ({ file, handleReplace, handleDownload, handleDetach }) => {
     return (react_1.default.createElement(ModelFileContainer, null,
         react_1.default.createElement(FileName_1.FileName, { file: file }),
         react_1.default.createElement(FileCreatedDate_1.FileCreatedDate, { file: file, className: "show-on-hover" }),
-        react_1.default.createElement(FileActions_1.FileActions, { sectionType: util_1.FileSectionType.Inline, handleDownload: file.id ? handleDownload : undefined, handleDetach: file.id ? handleDetach : undefined, handleReplace: handleReplace })));
+        react_1.default.createElement(FileActions_1.FileActions, { "data-cy": "file-actions", sectionType: util_1.FileSectionType.Inline, handleDownload: file.id ? handleDownload : undefined, handleDetach: file.id ? handleDetach : undefined, handleReplace: handleReplace })));
 };
 const Element = styled_components_1.default.div `
   display: flex;

package/dist/cjs/components/ManuscriptNoteList.js

@@ -108,7 +108,7 @@ exports.ManuscriptNoteList = react_1.default.memo(({ createKeyword, deleteModel,
             items.length > 0 && (react_1.default.createElement(Checkbox, null,
                 react_1.default.createElement(Checkbox_1.CheckboxField, { checked: selectResolved, onChange: handleOnSelectChange }),
                 react_1.default.createElement(exports.LabelText, null, "See resolved")))),
-        items.length >= 0 && (react_1.default.createElement(NoteListContainer, null, items.map(([target, noteData]) => {
+        items.length >= 0 && (react_1.default.createElement(NoteListContainer, { "data-cy": "notes-list" }, items.map(([target, noteData]) => {
             const isSelected = (selected &&
                 (selected.node.attrs.id === target ||
                     selected.node.attrs.rid === target)) ||

package/dist/cjs/components/References/BibliographyItemSource.js

@@ -0,0 +1,91 @@
+"use strict";
+/*!
+ * © 2023 Atypon Systems LLC
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.DocumentReferenceSource = void 0;
+const fuzzysort = __importStar(require("fuzzysort"));
+const newestFirst = (a, b) => {
+    if (a.createdAt === b.createdAt) {
+        return 0;
+    }
+    if (!a.createdAt) {
+        return -1;
+    }
+    if (!b.createdAt) {
+        return 1;
+    }
+    return b.createdAt - a.createdAt;
+};
+class DocumentReferenceSource {
+    constructor(items) {
+        this.id = 'document';
+        this.label = 'Document';
+        this.items = items;
+    }
+    search(query, limit) {
+        if (!query) {
+            return {
+                response: Promise.resolve({
+                    items: [...this.items].sort(newestFirst).slice(0, limit),
+                    total: this.items.length,
+                }),
+            };
+        }
+        const index = [...this.items].sort(newestFirst).map((i) => {
+            var _a;
+            return {
+                item: i,
+                title: i.title,
+                authors: (_a = i.author) === null || _a === void 0 ? void 0 : _a.map((a) => `${a.given} ${a.family}`).join(', '),
+            };
+        });
+        const results = fuzzysort.go(query, index, {
+            keys: ['title', 'authors'],
+            limit: limit,
+            threshold: -1000,
+        });
+        return {
+            response: Promise.resolve({
+                items: results.map((r) => r.obj.item),
+                total: results.total,
+            }),
+        };
+    }
+}
+exports.DocumentReferenceSource = DocumentReferenceSource;

package/dist/cjs/components/References/CitationEditor.js

@@ -0,0 +1,146 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.CitationEditor = void 0;
+const AnnotationEdit_1 = __importDefault(require("@manuscripts/assets/react/AnnotationEdit"));
+const CloseIconDark_1 = __importDefault(require("@manuscripts/assets/react/CloseIconDark"));
+const transform_1 = require("@manuscripts/transform");
+const react_1 = __importStar(require("react"));
+const styled_components_1 = __importDefault(require("styled-components"));
+const Button_1 = require("../Button");
+const Dialog_1 = require("../Dialog");
+const icons_1 = require("../icons");
+const CitationViewer_1 = require("./CitationViewer");
+const ReferenceLine_1 = require("./ReferenceLine");
+const ReferenceSearch_1 = require("./ReferenceSearch");
+const ReferencesModal_1 = require("./ReferencesModal");
+const AddCommentButtonText = styled_components_1.default.div `
+  display: contents;
+  font-family: ${(props) => props.theme.font.family.sans};
+  font-weight: ${(props) => props.theme.font.weight.normal};
+  font-size: ${(props) => props.theme.font.size.small};
+  line-height: ${(props) => props.theme.font.lineHeight.large};
+  color: ${(props) => props.theme.colors.text.primary};
+`;
+const CitedItemActions = styled_components_1.default.div `
+  display: flex;
+  align-items: center;
+  margin-left: 12px;
+
+  svg.remove-icon {
+    height: ${(props) => props.theme.grid.unit * 4}px;
+    width: ${(props) => props.theme.grid.unit * 4}px;
+  }
+`;
+const ActionButton = (0, styled_components_1.default)(Button_1.IconButton).attrs({
+    size: 24,
+}) `
+  :disabled {
+    background-color: transparent !important;
+    border-color: transparent !important;
+    color: rgb(255, 255, 255);
+    path,
+    g {
+      fill: ${(props) => props.theme.colors.background.tertiary} !important;
+    }
+  }
+  :not(:disabled):focus,
+  :not(:disabled):hover {
+    path,
+    g {
+      fill: ${(props) => props.theme.colors.brand.medium} !important;
+    }
+  }
+`;
+const EditReferenceButton = (0, styled_components_1.default)(ActionButton) `
+  margin-right: ${(props) => props.theme.grid.unit * 3}px;
+`;
+const Actions = styled_components_1.default.div `
+  margin: ${(props) => props.theme.grid.unit * 4}px;
+  display: flex;
+  justify-content: space-between;
+  align-items: center;
+`;
+const CitationEditor = ({ query, rids, items, citationCounts, sources, onCite, onUncite, onSave, onDelete, onComment, onCancel, canEdit, }) => {
+    const [deleteDialog, setDeleteDialog] = (0, react_1.useState)({ show: false });
+    const [editingForm, setEditingForm] = (0, react_1.useState)({
+        show: false,
+    });
+    const [searching, setSearching] = (0, react_1.useState)(false);
+    const handleAdd = () => {
+        setSearching(false);
+        const item = (0, transform_1.buildBibliographyItem)({});
+        onSave(item);
+        onCite([item]);
+        setEditingForm({ show: true, item: item });
+    };
+    const cited = (0, react_1.useMemo)(() => {
+        return rids.flatMap((rid) => items.filter((i) => i._id === rid));
+    }, [rids, items]);
+    if (searching) {
+        return (react_1.default.createElement(ReferenceSearch_1.ReferenceSearch, { sources: sources, items: items, onAdd: handleAdd, onCite: (items) => {
+                setSearching(false);
+                onCite(items);
+            }, onCancel: () => setSearching(false) }));
+    }
+    if (!rids.length) {
+        return (react_1.default.createElement(ReferenceSearch_1.ReferenceSearch, { query: query, sources: sources, items: items, onAdd: handleAdd, onCite: onCite, onCancel: onCancel }));
+    }
+    return (react_1.default.createElement(react_1.default.Fragment, null,
+        react_1.default.createElement(Dialog_1.Dialog, { isOpen: deleteDialog.show, category: Dialog_1.Category.confirmation, header: "Remove cited item", message: "Are you sure you want to remove this cited item? It will still exist in the reference list.", actions: {
+                secondary: {
+                    action: () => {
+                        if (deleteDialog.id) {
+                            onUncite(deleteDialog.id);
+                            setDeleteDialog({ show: false });
+                        }
+                    },
+                    title: 'Remove',
+                },
+                primary: {
+                    action: () => setDeleteDialog({ show: false }),
+                    title: 'Cancel',
+                },
+            } }),
+        react_1.default.createElement(CitationViewer_1.CitedItems, null, cited.map((item) => (react_1.default.createElement(CitationViewer_1.CitedItem, { key: item._id },
+            react_1.default.createElement(ReferenceLine_1.ReferenceLine, { item: item }),
+            react_1.default.createElement(CitedItemActions, null,
+                react_1.default.createElement(EditReferenceButton, { value: item._id, disabled: !canEdit, onClick: () => setEditingForm({ show: true, item: item }) },
+                    react_1.default.createElement(AnnotationEdit_1.default, { color: '#6E6E6E' })),
+                react_1.default.createElement(ActionButton, { disabled: !canEdit, onClick: () => setDeleteDialog({ show: true, id: item._id }) },
+                    react_1.default.createElement(CloseIconDark_1.default, { className: 'remove-icon' }))))))),
+        react_1.default.createElement(ReferencesModal_1.ReferencesModal, { isOpen: editingForm.show, onCancel: () => setEditingForm({ show: false }), items: items, citationCounts: citationCounts, item: editingForm.item, onSave: onSave, onDelete: onDelete }),
+        react_1.default.createElement(Actions, null,
+            react_1.default.createElement(Button_1.IconTextButton, { onClick: onComment },
+                react_1.default.createElement(icons_1.AddComment, null),
+                react_1.default.createElement(AddCommentButtonText, null, "Add Comment")),
+            react_1.default.createElement(Button_1.ButtonGroup, null,
+                react_1.default.createElement(Button_1.SecondaryButton, { onClick: onCancel }, "Done"),
+                react_1.default.createElement(Button_1.PrimaryButton, { disabled: !canEdit, onClick: () => setSearching(true) }, "Add Citation")))));
+};
+exports.CitationEditor = CitationEditor;

package/dist/cjs/components/References/CitationViewer.js

@@ -0,0 +1,69 @@
+"use strict";
+/*!
+ * © 2024 Atypon Systems LLC
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.CitationViewer = exports.CitedItem = exports.CitedItems = void 0;
+const react_1 = __importStar(require("react"));
+const styled_components_1 = __importDefault(require("styled-components"));
+const ReferenceLine_1 = require("./ReferenceLine");
+exports.CitedItems = styled_components_1.default.div `
+  padding: 0 ${(props) => props.theme.grid.unit * 4}px;
+  font-family: ${(props) => props.theme.font.family.sans};
+  max-height: 70vh;
+  min-height: 100px;
+  overflow-y: auto;
+`;
+exports.CitedItem = styled_components_1.default.div `
+  display: flex;
+  padding: ${(props) => props.theme.grid.unit * 4}px 0;
+
+  &:not(:last-of-type) {
+    border-bottom: 1px solid ${(props) => props.theme.colors.border.secondary};
+  }
+`;
+const CitationViewer = ({ rids, items, }) => {
+    const cited = (0, react_1.useMemo)(() => {
+        return rids.flatMap((rid) => items.filter((i) => i._id === rid));
+    }, [rids, items]);
+    return (react_1.default.createElement(exports.CitedItems, null, cited.map((item) => (react_1.default.createElement(ReferenceLine_1.ReferenceLine, { key: item._id, item: item })))));
+};
+exports.CitationViewer = CitationViewer;