@mandible-ai/mandible 0.3.13 → 0.3.14

package/dist/src/environments/dolt/adapter.js

@@ -1,15 +1,11 @@
 // ============================================================
-// Dolt Environment Adapter (Stub)
+// Dolt Environment Adapter — DoltHub HTTP API
 // ============================================================
-// Dolt is a SQL database with Git-like versioning.
-// This makes it a natural stigmergy environment because:
+// Maps the stigmergy Environment interface to a DoltHub database
+// via the DoltHub v1alpha1 REST API.
 //
-//   1. Signals = rows in a signals table
-//   2. Concentration = numeric column, trivial to query/sort
-//   3. Claims = SELECT ... FOR UPDATE (real DB-level locking)
-//   4. History = Dolt's built-in versioning (dolt_diff, dolt_log)
-//   5. Watch = Dolt's binlog or polling
-//   6. Branching = multiple environment "realities" (experiments!)
+// No local Dolt server or mysql2 dependency required — just a
+// DoltHub account, a database, and an API token.
 //
 // Schema:
 //   CREATE TABLE signals (
@@ -28,84 +24,289 @@
 //     withdrawn BOOLEAN DEFAULT FALSE,
 //     INDEX idx_type (type),
 //     INDEX idx_concentration (concentration),
-//     INDEX idx_unclaimed (claimed_by, withdrawn)
+//     INDEX idx_unclaimed (withdrawn, claimed_by)
 //   );
 //
-// The branching capability opens up a fascinating pattern:
-//   - Shaper colony works on a Dolt branch
-//   - Critic colony reviews by diffing branches
-//   - Keeper merges branches (Dolt merge = Git merge for data)
-//   - Signals themselves can be branched and merged!
+// Branching capability:
+//   - createBranch / mergeBranch / diffBranch
+//   - Colonies can operate on branches for isolation
+//   - Dolt handles merge conflicts at the row level
 // ============================================================
 import { registerEnvironment } from '../../core/environment-registry.js';
+import { createSignal } from '../../core/signal.js';
+import { validateSignalInput } from '../../core/validation.js';
+import { DoltHubClient, sqlValue } from './client.js';
+import { tryCreateSQLClient } from './sql-client.js';
+const CREATE_TABLE_SQL = `CREATE TABLE IF NOT EXISTS signals (
+  id VARCHAR(64) PRIMARY KEY,
+  type VARCHAR(255) NOT NULL,
+  payload JSON,
+  deposited_at BIGINT NOT NULL,
+  deposited_by VARCHAR(255),
+  concentration DECIMAL(5,4) DEFAULT 1.0,
+  ttl BIGINT,
+  claimed_by VARCHAR(255),
+  claimed_at BIGINT,
+  claim_lease BIGINT,
+  caused_by JSON,
+  tags JSON,
+  withdrawn BOOLEAN DEFAULT FALSE,
+  INDEX idx_type (type),
+  INDEX idx_concentration (concentration),
+  INDEX idx_unclaimed (withdrawn, claimed_by)
+)`;
 export class DoltEnvironment {
     name;
+    client;
+    sqlClient;
     config;
+    pollInterval;
+    initPromise;
     constructor(config) {
         this.config = config;
-        this.name = config.name ?? `dolt:${config.database}/${config.branch ?? 'main'}`;
+        this.client = new DoltHubClient(config);
+        this.name = config.name ?? `dolt:${config.owner}/${config.database}/${config.branch ?? 'main'}`;
+        this.pollInterval = config.pollInterval ?? 5000;
+    }
+    ensureInit() {
+        if (!this.initPromise) {
+            this.initPromise = this.doInit();
+        }
+        return this.initPromise;
+    }
+    async doInit() {
+        // Try to connect via mysql2 if sql config provided
+        if (this.config.sql && !this.sqlClient) {
+            const client = await tryCreateSQLClient(this.config.sql);
+            if (client) {
+                this.sqlClient = client;
+            }
+        }
+        await this.activeClient.execute(CREATE_TABLE_SQL);
+    }
+    /** Returns the SQL client if available, otherwise falls back to HTTP client */
+    get activeClient() {
+        return this.sqlClient ?? this.client;
     }
     // ----------------------------------------------------------
-    // All methods throw until a Dolt client is integrated.
-    // The interface is identical to FilesystemEnvironment so
-    // colony definitions work unchanged across either env.
+    // Core operations
     // ----------------------------------------------------------
     async observe(query) {
-        // TODO: SELECT * FROM signals WHERE type LIKE ? AND concentration >= ? AND claimed_by IS NULL ...
-        // Dolt's SQL engine makes this trivially efficient with proper indexes.
-        throw new Error('DoltEnvironment: not yet implemented. Install doltdb and configure connection.');
+        await this.ensureInit();
+        const conditions = ['withdrawn = FALSE'];
+        if (query.type) {
+            if (Array.isArray(query.type)) {
+                const likes = query.type.map(t => `type LIKE ${sqlValue(globToLike(t))}`);
+                conditions.push(`(${likes.join(' OR ')})`);
+            }
+            else {
+                conditions.push(`type LIKE ${sqlValue(globToLike(query.type))}`);
+            }
+        }
+        if (query.minConcentration !== undefined) {
+            conditions.push(`concentration >= ${sqlValue(query.minConcentration)}`);
+        }
+        if (query.unclaimed) {
+            conditions.push('claimed_by IS NULL');
+        }
+        if (query.tags && query.tags.length > 0) {
+            // Check that all query tags exist in the signal's tags JSON array
+            for (const tag of query.tags) {
+                conditions.push(`JSON_CONTAINS(tags, ${sqlValue(JSON.stringify(tag))})`);
+            }
+        }
+        if (query.after !== undefined) {
+            conditions.push(`deposited_at > ${sqlValue(query.after)}`);
+        }
+        let sql = `SELECT * FROM signals WHERE ${conditions.join(' AND ')} ORDER BY concentration DESC`;
+        if (query.limit) {
+            sql += ` LIMIT ${sanitizeLimit(query.limit)}`;
+        }
+        const { rows } = await this.activeClient.query(sql);
+        let signals = rows.map(rowToSignal);
+        // Apply custom filter predicate if provided (can't express in SQL)
+        if (query.filter) {
+            signals = signals.filter(query.filter);
+        }
+        return signals;
     }
     async deposit(input) {
-        // TODO: INSERT INTO signals (id, type, payload, ...) VALUES (?, ?, ?, ...)
-        // Then: CALL DOLT_COMMIT('-m', 'deposit: {type}')  ← auto-version each signal!
-        throw new Error('DoltEnvironment: not yet implemented.');
+        await this.ensureInit();
+        validateSignalInput(input);
+        const signal = createSignal(input.type, input.payload, {
+            deposited_by: input.meta?.deposited_by,
+            ttl: input.meta?.ttl,
+            tags: input.meta?.tags,
+            caused_by: input.meta?.caused_by,
+            concentration: input.meta?.concentration,
+        });
+        const sql = `INSERT INTO signals (id, type, payload, deposited_at, deposited_by, concentration, ttl, caused_by, tags, withdrawn) VALUES (${sqlValue(signal.id)}, ${sqlValue(signal.type)}, ${sqlValue(JSON.stringify(signal.payload))}, ${sqlValue(signal.meta.deposited_at)}, ${sqlValue(signal.meta.deposited_by)}, ${sqlValue(signal.meta.concentration)}, ${signal.meta.ttl != null ? sqlValue(signal.meta.ttl) : 'NULL'}, ${signal.meta.caused_by ? sqlValue(JSON.stringify(signal.meta.caused_by)) : 'NULL'}, ${signal.meta.tags ? sqlValue(JSON.stringify(signal.meta.tags)) : 'NULL'}, FALSE)`;
+        await this.activeClient.execute(sql);
+        return signal;
     }
     async withdraw(signalId) {
-        // TODO: UPDATE signals SET withdrawn = TRUE WHERE id = ?
-        // Dolt keeps the history automatically — no need for a separate withdrawn table.
-        throw new Error('DoltEnvironment: not yet implemented.');
+        await this.ensureInit();
+        await this.activeClient.execute(`UPDATE signals SET withdrawn = TRUE WHERE id = ${sqlValue(signalId)}`);
     }
-    async claim(signalId, claimant, leaseDuration) {
-        // TODO: BEGIN; SELECT ... FOR UPDATE; UPDATE SET claimed_by = ?; COMMIT;
-        // This gives us real ACID claim semantics — no filesystem race conditions.
-        throw new Error('DoltEnvironment: not yet implemented.');
+    async update(signalId, changes) {
+        await this.ensureInit();
+        const setClauses = [];
+        if (changes.payload) {
+            // Read current payload, merge, then SET
+            const { rows } = await this.activeClient.query(`SELECT payload FROM signals WHERE id = ${sqlValue(signalId)} AND withdrawn = FALSE`);
+            if (rows.length === 0) {
+                throw new Error(`Signal ${signalId} not found or already withdrawn`);
+            }
+            const current = (parseJSON(rows[0].payload) ?? {});
+            const merged = { ...current, ...changes.payload };
+            setClauses.push(`payload = ${sqlValue(JSON.stringify(merged))}`);
+        }
+        if (changes.meta?.tags !== undefined) {
+            setClauses.push(`tags = ${sqlValue(JSON.stringify(changes.meta.tags))}`);
+        }
+        if (changes.meta?.concentration !== undefined) {
+            setClauses.push(`concentration = ${sqlValue(changes.meta.concentration)}`);
+        }
+        if (setClauses.length === 0) {
+            // No changes — just read and return
+            const { rows } = await this.activeClient.query(`SELECT * FROM signals WHERE id = ${sqlValue(signalId)} AND withdrawn = FALSE`);
+            if (rows.length === 0) {
+                throw new Error(`Signal ${signalId} not found or already withdrawn`);
+            }
+            return rowToSignal(rows[0]);
+        }
+        const updateSql = `UPDATE signals SET ${setClauses.join(', ')} WHERE id = ${sqlValue(signalId)} AND withdrawn = FALSE`;
+        const result = await this.activeClient.execute(updateSql);
+        if (result.affectedRows === 0) {
+            throw new Error(`Signal ${signalId} not found or already withdrawn`);
+        }
+        // Re-read the updated signal
+        const { rows } = await this.activeClient.query(`SELECT * FROM signals WHERE id = ${sqlValue(signalId)}`);
+        return rowToSignal(rows[0]);
+    }
+    async claim(signalId, claimant, leaseDuration = 60_000) {
+        await this.ensureInit();
+        const now = Date.now();
+        const sql = `UPDATE signals SET claimed_by = ${sqlValue(claimant)}, claimed_at = ${sqlValue(now)}, claim_lease = ${sqlValue(leaseDuration)} WHERE id = ${sqlValue(signalId)} AND withdrawn = FALSE AND (claimed_by IS NULL OR (claimed_at + claim_lease) < ${sqlValue(now)})`;
+        const result = await this.activeClient.execute(sql);
+        return result.affectedRows > 0;
     }
     async release(signalId) {
-        // TODO: UPDATE signals SET claimed_by = NULL, claimed_at = NULL WHERE id = ?
-        throw new Error('DoltEnvironment: not yet implemented.');
+        await this.ensureInit();
+        await this.activeClient.execute(`UPDATE signals SET claimed_by = NULL, claimed_at = NULL, claim_lease = NULL WHERE id = ${sqlValue(signalId)}`);
     }
     watch(query, callback) {
-        // TODO: Poll-based initially, or use Dolt's binlog for push.
-        // Dolt also supports `dolt_diff()` which could detect new signals by comparing commits.
-        throw new Error('DoltEnvironment: not yet implemented.');
+        const seen = new Set();
+        let active = true;
+        let timer;
+        const poll = async () => {
+            if (!active)
+                return;
+            try {
+                const signals = await this.observe(query);
+                for (const signal of signals) {
+                    if (!active)
+                        return;
+                    if (!seen.has(signal.id)) {
+                        seen.add(signal.id);
+                        callback(signal);
+                    }
+                }
+            }
+            catch {
+                // Swallow errors during polling — will retry on next interval
+            }
+        };
+        // Initial poll, then interval
+        const setup = async () => {
+            await poll();
+            if (active) {
+                timer = setInterval(poll, this.pollInterval);
+            }
+        };
+        setup();
+        return {
+            unsubscribe() {
+                active = false;
+                if (timer)
+                    clearInterval(timer);
+            },
+        };
     }
     async history(query) {
-        // TODO: This is where Dolt SHINES.
-        // SELECT * FROM `dolt_history_signals` WHERE type LIKE ?
-        // Gets the full history of every signal across all commits.
-        // Can even query: "what did the signal table look like 5 minutes ago?"
-        //   AS OF 'HEAD~5' or AS OF TIMESTAMP '2024-01-01 00:00:00'
-        throw new Error('DoltEnvironment: not yet implemented.');
+        await this.ensureInit();
+        const conditions = [];
+        if (!query.includeWithdrawn) {
+            conditions.push('withdrawn = FALSE');
+        }
+        if (query.type) {
+            if (Array.isArray(query.type)) {
+                const likes = query.type.map(t => `type LIKE ${sqlValue(globToLike(t))}`);
+                conditions.push(`(${likes.join(' OR ')})`);
+            }
+            else {
+                conditions.push(`type LIKE ${sqlValue(globToLike(query.type))}`);
+            }
+        }
+        const where = conditions.length > 0 ? `WHERE ${conditions.join(' AND ')}` : '';
+        let sql = `SELECT * FROM signals ${where} ORDER BY deposited_at DESC`;
+        if (query.limit) {
+            sql += ` LIMIT ${sanitizeLimit(query.limit)}`;
+        }
+        const { rows } = await this.activeClient.query(sql);
+        let signals = rows.map(rowToSignal);
+        if (query.filter) {
+            signals = signals.filter(query.filter);
+        }
+        return signals;
     }
     async decay() {
-        // TODO: UPDATE signals SET concentration = concentration - (rate * elapsed)
-        //       WHERE withdrawn = FALSE
-        //       DELETE FROM signals WHERE concentration < floor
-        // Single SQL statement — way more efficient than filesystem iteration.
-        throw new Error('DoltEnvironment: not yet implemented.');
+        await this.ensureInit();
+        const now = Date.now();
+        const result = { decayed: 0, evaporated: 0, claimsReleased: 0 };
+        // Step 1: Release expired claims
+        const claimResult = await this.activeClient.execute(`UPDATE signals SET claimed_by = NULL, claimed_at = NULL, claim_lease = NULL WHERE claimed_by IS NOT NULL AND (claimed_at + claim_lease) < ${sqlValue(now)}`);
+        result.claimsReleased = claimResult.affectedRows;
+        // Step 2: Evaporate signals below floor or past TTL
+        // Target concentration = 1.0 - rate * age. Evaporate when target < 0.05.
+        const evapResult = await this.activeClient.execute(`UPDATE signals SET withdrawn = TRUE WHERE withdrawn = FALSE AND ((1.0 - (0.01 * (${sqlValue(now)} - deposited_at) / 1000.0)) < 0.05 OR (ttl IS NOT NULL AND (deposited_at + ttl) < ${sqlValue(now)}))`);
+        result.evaporated = evapResult.affectedRows;
+        // Step 3: Update remaining concentrations
+        // Directly SET the target concentration (linear decay from 1.0).
+        // Use LEAST(concentration, target) to never increase concentration
+        // (handles signals deposited at <1.0, e.g. gated signals).
+        const decayResult = await this.activeClient.execute(`UPDATE signals SET concentration = LEAST(concentration, GREATEST(0, 1.0 - (0.01 * (${sqlValue(now)} - deposited_at) / 1000.0))) WHERE withdrawn = FALSE`);
+        result.decayed = decayResult.affectedRows;
+        return result;
     }
     async snapshot() {
-        // TODO: SELECT * FROM signals WHERE withdrawn = FALSE ORDER BY concentration DESC
-        throw new Error('DoltEnvironment: not yet implemented.');
+        await this.ensureInit();
+        const { rows } = await this.activeClient.query('SELECT * FROM signals WHERE withdrawn = FALSE ORDER BY concentration DESC');
+        return rows.map(rowToSignal);
     }
+    // ----------------------------------------------------------
+    // Lifecycle
+    // ----------------------------------------------------------
+    /** Close the mysql2 connection pool (if active). Call on shutdown to prevent leaks. */
+    async close() {
+        if (this.sqlClient) {
+            await this.sqlClient.close();
+            this.sqlClient = undefined;
+        }
+    }
+    // ----------------------------------------------------------
+    // Serialization
+    // ----------------------------------------------------------
     serialize() {
-        return {
+        const config = {
             type: 'dolt',
             name: this.name,
-            connectionString: this.config.connectionString,
+            owner: this.config.owner,
             database: this.config.database,
             branch: this.config.branch,
+            apiBase: this.config.apiBase,
         };
+        return config;
     }
     // ----------------------------------------------------------
     // Dolt-specific operations (not part of the base interface)
@@ -115,31 +316,90 @@ export class DoltEnvironment {
      * Colonies can operate on branches for isolation/experimentation.
      */
     async createBranch(branchName, fromBranch) {
-        // TODO: CALL DOLT_BRANCH(branchName, fromBranch ?? 'main')
-        throw new Error('DoltEnvironment: not yet implemented.');
+        await this.client.createBranch(branchName, fromBranch);
     }
     /**
      * Merge a branch back. Signals deposited on the branch become visible on target.
      * Dolt handles merge conflicts at the row level.
      */
     async mergeBranch(sourceBranch, targetBranch) {
-        // TODO: CALL DOLT_CHECKOUT(targetBranch); CALL DOLT_MERGE(sourceBranch);
-        throw new Error('DoltEnvironment: not yet implemented.');
+        await this.client.mergeBranch(sourceBranch, targetBranch ?? this.client.branch);
     }
     /**
      * Diff two branches to see what signals changed.
      * Useful for Critic colonies reviewing Shaper work.
      */
     async diffBranch(branch1, branch2) {
-        // TODO: SELECT * FROM dolt_diff('signals', branch1, branch2)
-        throw new Error('DoltEnvironment: not yet implemented.');
+        const { rows } = await this.client.query(`SELECT * FROM dolt_diff('signals', ${sqlValue(branch1)}, ${sqlValue(branch2)})`);
+        return rows.map(rowToSignal);
+    }
+}
+// ----------------------------------------------------------
+// Helpers
+// ----------------------------------------------------------
+/**
+ * Convert a glob pattern to a SQL LIKE pattern.
+ * `*` → `%`, `?` → `_`, escape existing `%` and `_`.
+ */
+function globToLike(glob) {
+    return glob
+        .replace(/%/g, '\\%')
+        .replace(/_/g, '\\_')
+        .replace(/\*/g, '%')
+        .replace(/\?/g, '_');
+}
+/**
+ * Map a database row to a Signal object.
+ * Handles JSON columns that may be strings or already-parsed objects.
+ */
+function rowToSignal(row) {
+    return {
+        id: row.id,
+        type: row.type,
+        payload: (parseJSON(row.payload) ?? {}),
+        meta: {
+            deposited_at: Number(row.deposited_at),
+            deposited_by: row.deposited_by ?? undefined,
+            concentration: Number(row.concentration),
+            ttl: row.ttl != null ? Number(row.ttl) : undefined,
+            claimed_by: row.claimed_by ?? undefined,
+            claimed_at: row.claimed_at != null ? Number(row.claimed_at) : undefined,
+            claim_lease: row.claim_lease != null ? Number(row.claim_lease) : undefined,
+            caused_by: parseJSON(row.caused_by) ?? undefined,
+            tags: parseJSON(row.tags) ?? undefined,
+        },
+    };
+}
+/**
+ * Coerce a limit value to a safe positive integer for SQL interpolation.
+ * Prevents SQL injection through unvalidated limit values.
+ */
+function sanitizeLimit(value) {
+    const n = Math.floor(Number(value));
+    if (!Number.isFinite(n) || n < 1)
+        return 1;
+    return n;
+}
+function parseJSON(value) {
+    if (value === null || value === undefined)
+        return undefined;
+    if (typeof value === 'string') {
+        try {
+            return JSON.parse(value);
+        }
+        catch {
+            return value;
+        }
     }
+    return value;
 }
 // Self-register for deserialization
 registerEnvironment('dolt', (c) => new DoltEnvironment({
-    connectionString: c.connectionString,
+    owner: c.owner,
     database: c.database,
     branch: c.branch,
+    apiBase: c.apiBase,
     name: c.name,
+    sql: c.sql,
 }));
 //# sourceMappingURL=adapter.js.map

package/dist/src/environments/dolt/adapter.js.map

@@ -1 +1 @@
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package/dist/src/environments/dolt/client.d.ts

@@ -0,0 +1,72 @@
+export interface DoltHubConfig {
+    /** DoltHub database owner (user or organization) */
+    owner: string;
+    /** Database name on DoltHub */
+    database: string;
+    /** Branch to operate on (default: 'main') */
+    branch?: string;
+    /** DoltHub API token (format: "dhat.v1.xxx"). Falls back to DOLTHUB_TOKEN env var */
+    token?: string;
+    /** API base URL (default: 'https://www.dolthub.com') */
+    apiBase?: string;
+}
+export declare class DoltHubError extends Error {
+    status: number;
+    responseBody?: unknown | undefined;
+    constructor(message: string, status: number, responseBody?: unknown | undefined);
+}
+export declare class DoltHubClient {
+    private readonly owner;
+    private readonly database;
+    readonly branch: string;
+    private readonly token;
+    private readonly apiBase;
+    constructor(config: DoltHubConfig);
+    /**
+     * Execute a read-only SQL query against the database.
+     * Returns rows as plain objects and column names.
+     */
+    query<T = Record<string, unknown>>(sql: string): Promise<{
+        rows: T[];
+        columns: string[];
+    }>;
+    /**
+     * Execute a write SQL statement (INSERT, UPDATE, DELETE, CREATE TABLE, etc.).
+     * Writes go through the async write endpoint — we poll until complete.
+     */
+    execute(sql: string): Promise<{
+        affectedRows: number;
+        message: string;
+    }>;
+    /**
+     * Create a new branch from an existing ref.
+     */
+    createBranch(name: string, fromRef?: string): Promise<void>;
+    /**
+     * List all branches in the database.
+     */
+    listBranches(): Promise<string[]>;
+    /**
+     * Merge source branch into target branch.
+     * Uses the write endpoint with no query — DoltHub interprets this as a merge.
+     */
+    mergeBranch(source: string, target: string): Promise<void>;
+    private fetch;
+    private parseResponse;
+    private pollOperation;
+    private parseWriteResult;
+}
+/**
+ * Escape a string value for safe interpolation into a SQL query.
+ * Handles single quotes, backslashes, and null bytes.
+ *
+ * This is used for internal values (signal IDs, colony names, type strings)
+ * — not arbitrary user input from the internet.
+ */
+export declare function escapeSQL(value: string): string;
+/**
+ * Format a value for SQL interpolation.
+ * Strings are quoted and escaped, numbers/booleans are literal, null/undefined become NULL.
+ */
+export declare function sqlValue(value: unknown): string;
+//# sourceMappingURL=client.d.ts.map

package/dist/src/environments/dolt/client.d.ts.map

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