npm - @magda/semantic-indexer-framework - Versions diffs - 5.2.0 → 6.0.0-alpha.12 - Mend

@magda/semantic-indexer-framework 5.2.0 → 6.0.0-alpha.12

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (10) hide show

package/dist/chunker.js +1 -1
package/dist/chunker.js.map +1 -1
package/dist/onRecordFoundStorageObject.js +50 -5
package/dist/onRecordFoundStorageObject.js.map +1 -1
package/dist/test/onRecordFoundStorageObject.spec.js +46 -1
package/dist/test/onRecordFoundStorageObject.spec.js.map +1 -1
package/dist/textSplitters.d.ts +87 -0
package/dist/textSplitters.js +751 -0
package/dist/textSplitters.js.map +1 -0
package/package.json +4 -5

package/dist/chunker.js CHANGED Viewed

@@ -1,4 +1,4 @@
-import { RecursiveCharacterTextSplitter } from "@langchain/textsplitters";
+import { RecursiveCharacterTextSplitter } from "./textSplitters.js";
 export class Chunker {
   strategy;
   constructor(strategy) {

package/dist/chunker.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"chunker.js","sourceRoot":"","sources":["../src/chunker.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,8BAA8B,EAAE,MAAM,oBAAoB,CAAC;AAepE,MAAM,OAAO,OAAO;IACR,QAAQ,CAAgB;IAChC,YAAY,QAAuB;QAC/B,IAAI,CAAC,QAAQ,GAAG,QAAQ,CAAC;IAC7B,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,IAAY;QACpB,OAAO,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IACrC,CAAC;CACJ;AAED,MAAM,OAAO,wBAAwB;IACzB,aAAa,CAAoB;IAEzC,YAAY,aAAgC;QACxC,IAAI,CAAC,aAAa,GAAG,aAAa,CAAC;IACvC,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,IAAY;QACpB,OAAO,IAAI,CAAC,aAAa,CAAC,IAAI,CAAC,CAAC;IACpC,CAAC;CACJ;AAED,MAAM,OAAO,sBAAsB;IACvB,SAAS,CAAC;IACV,OAAO,CAAC;IAEhB,YAAY,SAAiB,EAAE,OAAe;QAC1C,IAAI,OAAO,IAAI,SAAS;YACpB,MAAM,IAAI,KAAK,CAAC,6BAA6B,CAAC,CAAC;QACnD,IAAI,CAAC,SAAS,GAAG,SAAS,GAAG,CAAC,CAAC;QAC/B,IAAI,CAAC,OAAO,GAAG,OAAO,GAAG,CAAC,CAAC;IAC/B,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,IAAY;QACpB,IAAI,CAAC,IAAI,EAAE,CAAC;YACR,OAAO,EAAE,CAAC;QACd,CAAC;QAED,IAAI,IAAI,CAAC,MAAM,IAAI,IAAI,CAAC,SAAS,EAAE,CAAC;YAChC,OAAO;gBACH;oBACI,IAAI,EAAE,IAAI;oBACV,QAAQ,EAAE,CAAC;oBACX,MAAM,EAAE,IAAI,CAAC,MAAM;oBACnB,OAAO,EAAE,CAAC;iBACb;aACJ,CAAC;QACN,CAAC;QAED,MAAM,QAAQ,GAAG,IAAI,8BAA8B,CAAC;YAChD,SAAS,EAAE,IAAI,CAAC,SAAS;YACzB,YAAY,EAAE,IAAI,CAAC,OAAO;YAC1B,aAAa,EAAE,IAAI;YACnB,eAAe,EAAE,KAAK;SACzB,CAAC,CAAC;QAEH,MAAM,MAAM,GAAG,MAAM,QAAQ,CAAC,qBAAqB,CAAC,IAAI,CAAC,CAAC;QAE1D,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,MAAM,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;YACrC,IAAI,MAAM,CAAC,CAAC,CAAC,CAAC,OAAO,KAAK,CAAC,IAAI,MAAM,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC;gBAC1D,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,GAAG,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;gBACzD,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,GAAG,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;gBAC/D,MAAM,CAAC,MAAM,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;gBACpB,CAAC,EAAE,CAAC;YACR,CAAC;QACL,CAAC;QAED,OAAO,MAAM,CAAC;IAClB,CAAC;CACJ;AAED,MAAM,OAAO,wBAAwB;IACzB,SAAS,CAAS;IAClB,OAAO,CAAS;IAExB,YAAY,SAAiB,EAAE,OAAe;QAC1C,IAAI,CAAC,SAAS,GAAG,SAAS,CAAC;QAC3B,IAAI,CAAC,OAAO,GAAG,OAAO,CAAC;QACvB,IAAI,IAAI,CAAC,OAAO,IAAI,IAAI,CAAC,SAAS,GAAG,CAAC,EAAE,CAAC;YACrC,MAAM,IAAI,KAAK,CAAC,8CAA8C,CAAC,CAAC;QACpE,CAAC;IACL,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,IAAY;QACpB,MAAM,MAAM,GAAkB,EAAE,CAAC;QACjC,KACI,IAAI,CAAC,GAAG,CAAC,EACT,CAAC,GAAG,IAAI,CAAC,MAAM,GAAG,IAAI,CAAC,OAAO,EAC9B,CAAC,IAAI,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,OAAO,EACpC,CAAC;YACC,MAAM,SAAS,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,SAAS,CAAC,CAAC;YACpD,MAAM,CAAC,IAAI,CAAC;gBACR,IAAI,EAAE,SAAS;gBACf,QAAQ,EAAE,CAAC;gBACX,MAAM,EAAE,SAAS,CAAC,MAAM;gBACxB,OAAO,EAAE,IAAI,CAAC,OAAO;aACxB,CAAC,CAAC;QACP,CAAC;QACD,OAAO,MAAM,CAAC;IAClB,CAAC;CACJ"}

package/dist/onRecordFoundStorageObject.js CHANGED Viewed

@@ -8,8 +8,11 @@ import { v4 as uuidv4 } from "uuid";
 import { SkipError } from "./SkipError.js";
 import urijs from "urijs";
 import { pipeline } from "stream/promises";
+import { createBrotliDecompress, createGunzip, createInflate } from "zlib";
 import ServerError from "@magda/typescript-common/dist/ServerError.js";
 import { deleteTempFile } from "./helpers.js";
+class RetryableDownloadError extends Error {}
 // The onRecordFound function passed to minion sdk to handle storage object records
 export const onRecordFoundStorageObject = (options, chunker, embeddingApiClient, opensearchApiClient, minioClient, registryReadonlyClient) => {
   return async (dist, registry) => {
@@ -86,7 +89,7 @@ export const onRecordFoundStorageObject = (options, chunker, embeddingApiClient,
   };
 };
 async function downloadFileWithRetry(url, minioClient) {
-  return retry(() => downloadFile(url, minioClient), 1, 5, (err, retries) => {});
+  return retry(() => downloadFile(url, minioClient), 1, 5, (err, retries) => {}, (err) => err instanceof RetryableDownloadError);
 }
 async function downloadFile(url, minioClient) {
   const uri = urijs(url);
@@ -100,12 +103,20 @@ async function downloadFile(url, minioClient) {
   }
   let response;
   try {
-    response = await fetch(url);
+    response = await fetch(url, {
+      compress: false,
+      headers: {
+        "accept-encoding": "gzip, deflate, br"
+      }
+    });
   }
   catch (err) {
-    throw new SkipError(`Failed to download file because network error`);
+    throw new RetryableDownloadError(`Failed to download file because network error`);
   }
   if (!response.ok) {
+    if (response.status >= 500 || response.status === 429) {
+      throw new RetryableDownloadError(`Failed to download file because HTTP error ${response.status}`);
+    }
     throw new SkipError(`Failed to download file because HTTP error ${response.status}`);
   }
   if (!response.body) {
@@ -115,15 +126,49 @@ async function downloadFile(url, minioClient) {
   const tempFileName = `${uuidv4()}`;
   const suffix = new urijs(url).suffix();
   const tempFilePath = join(tempDir, `${tempFileName}.${suffix}`);
+  const responseStream = getDecodedResponseStream(response);
   try {
     const writeStream = fs.createWriteStream(tempFilePath);
-    await pipeline(response.body, writeStream);
+    await pipeline(responseStream, writeStream);
     return tempFilePath;
   }
   catch (err) {
     await deleteTempFile(tempFilePath);
-    throw new SkipError(`Failed to write file`);
+    throw new SkipError(`Failed to write file: ${err.message}`);
+  }
+}
+function getDecodedResponseStream(response) {
+  if (!response.body) {
+    throw new SkipError("No response body to write to file");
+  }
+  let stream = response.body;
+  const contentEncodingHeader = response.headers.get("content-encoding")?.toLowerCase() || "";
+  const encodings = contentEncodingHeader.
+  split(",").
+  map((encoding) => encoding.trim()).
+  filter(Boolean);
+  if (encodings.length === 0 || encodings[0] === "identity") {
+    return stream;
+  }
+  // Content-Encoding is applied in order and must be decoded in reverse.
+  for (let i = encodings.length - 1; i >= 0; i--) {
+    const encoding = encodings[i];
+    switch (encoding) {
+      case "gzip":
+      case "x-gzip":
+        stream = stream.pipe(createGunzip());
+        break;
+      case "deflate":
+        stream = stream.pipe(createInflate());
+        break;
+      case "br":
+        stream = stream.pipe(createBrotliDecompress());
+        break;
+      default:
+        throw new SkipError(`Unsupported content encoding: ${encoding}`);
+    }
   }
+  return stream;
 }
 export async function getParentRecordId(distributionId, registry) {
   try {

package/dist/onRecordFoundStorageObject.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/dist/test/onRecordFoundStorageObject.spec.js CHANGED Viewed

@@ -7,6 +7,7 @@ import fs from "fs";
 import nock from "nock";
 import { tmpdir } from "os";
 import { join } from "path";
+import { gzipSync } from "zlib";
 describe("onRecordFoundStorageObject", () => {
     let testEnv;
     beforeEach(() => {
@@ -79,7 +80,13 @@ describe("onRecordFoundStorageObject", () => {
     });
     it("should handle and index storage object with expected formatType, with autoDownloadFile enabled", async () => {
         const fileContent = "test1";
-        nock("http://test.com").get("/file.csv").reply(200, fileContent);
+        nock("http://test.com")
+            .matchHeader("accept-encoding", /gzip,\s*deflate,\s*br/i)
+            .get("/file.csv")
+            .reply(200, gzipSync(Buffer.from(fileContent)), {
+            "content-type": "application/octet-stream",
+            "content-encoding": "gzip"
+        });
         const record = createRecord({
             id: "id1",
             aspects: {
@@ -219,6 +226,44 @@ describe("onRecordFoundStorageObject", () => {
         }
         nock.cleanAll();
     });
+    it("should skip record (without throwing) when server returns malformed compressed response", async () => {
+        const malformedCompressedBody = Buffer.concat([
+            gzipSync(Buffer.from("test1")),
+            Buffer.from("JUNK_TRAILING_BYTES")
+        ]);
+        nock("http://test.com")
+            .matchHeader("accept-encoding", /gzip,\s*deflate,\s*br/i)
+            .get("/file.csv")
+            .reply(200, malformedCompressedBody, {
+            "content-type": "application/octet-stream",
+            "content-encoding": "gzip"
+        });
+        const record = createRecord({
+            id: "id1",
+            aspects: {
+                "dataset-format": { format: "csv" },
+                "dcat-distribution-strings": {
+                    format: "csv",
+                    downloadURL: "http://test.com/file.csv"
+                }
+            }
+        });
+        const userConfig = testEnv.updateUserConfig({
+            itemType: "storageObject",
+            formatTypes: ["csv"],
+            autoDownloadFile: true
+        });
+        const onRecordFound = onRecordFoundStorageObject(userConfig, testEnv.chunker, testEnv.embeddingApiClient, testEnv.opensearchApiClient, testEnv.minioClient, testEnv.registry);
+        await expectNoThrowsAsync(() => onRecordFound(record, testEnv.registry));
+        testEnv.expectSuccessCalls({
+            createEmbeddingTextCallCount: 0,
+            chunkCallCount: 0,
+            embeddingApiCallCount: 0,
+            bulkIndexCallCount: 0,
+            deleteByQueryCallCount: 0
+        });
+        nock.cleanAll();
+    });
     it("should filter out records with unexpected formatType", async () => {
         testEnv.createEmbeddingTextStub.resolves({
             text: "embedding text: test1"

package/dist/test/onRecordFoundStorageObject.spec.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/textSplitters.d.ts ADDED Viewed

@@ -0,0 +1,87 @@
+import type * as tiktoken from "js-tiktoken";
+import { Document, BaseDocumentTransformer } from "@langchain/core/documents";
+export interface TextSplitterParams {
+  chunkSize: number;
+  chunkOverlap: number;
+  keepSeparator: boolean;
+  stripWhitespace: boolean;
+  lengthFunction?: ((text: string) => number) | ((text: string) => Promise<number>);
+}
+interface ChunkWithMetadata {
+  text: string;
+  position: number;
+  overlap: number;
+  length: number;
+}
+export type TextSplitterChunkHeaderOptions = {
+  chunkHeader?: string;
+  chunkOverlapHeader?: string;
+  appendChunkOverlapHeader?: boolean;
+};
+export declare abstract class TextSplitter extends BaseDocumentTransformer implements TextSplitterParams {
+  lc_namespace: string[];
+  chunkSize: number;
+  chunkOverlap: number;
+  keepSeparator: boolean;
+  stripWhitespace: boolean;
+  lengthFunction: ((text: string) => number) | ((text: string) => Promise<number>);
+  constructor(fields?: Partial<TextSplitterParams>);
+  transformDocuments(documents: Document[], chunkHeaderOptions?: TextSplitterChunkHeaderOptions): Promise<Document[]>;
+  abstract splitText(text: string): Promise<string[]>;
+  protected splitOnSeparator(text: string, separator: string, offset?: number): Promise<ChunkWithMetadata[]>;
+  createDocuments(texts: string[], metadatas?: Record<string, any>[], chunkHeaderOptions?: TextSplitterChunkHeaderOptions): Promise<Document[]>;
+  private numberOfNewLines;
+  splitDocuments(documents: Document[], chunkHeaderOptions?: TextSplitterChunkHeaderOptions): Promise<Document[]>;
+  private joinDocs;
+  mergeSplits(splits: ChunkWithMetadata[], separator: string): Promise<ChunkWithMetadata[]>;
+}
+export interface CharacterTextSplitterParams extends TextSplitterParams {
+  separator: string;
+}
+export declare class CharacterTextSplitter extends TextSplitter implements CharacterTextSplitterParams {
+  static lc_name(): string;
+  separator: string;
+  constructor(fields?: Partial<CharacterTextSplitterParams>);
+  splitText(text: string): Promise<string[]>;
+}
+export interface RecursiveCharacterTextSplitterParams extends TextSplitterParams {
+  separators: string[];
+}
+export declare const SupportedTextSplitterLanguages: readonly ["cpp", "go", "java", "js", "php", "proto", "python", "rst", "ruby", "rust", "scala", "swift", "markdown", "latex", "html", "sol"];
+export type SupportedTextSplitterLanguage = typeof SupportedTextSplitterLanguages[number];
+export declare class RecursiveCharacterTextSplitter extends TextSplitter implements RecursiveCharacterTextSplitterParams {
+  static lc_name(): string;
+  separators: string[];
+  constructor(fields?: Partial<RecursiveCharacterTextSplitterParams>);
+  private _splitText;
+  splitText(text: string): Promise<string[]>;
+  splitTextWithMetadata(text: string): Promise<ChunkWithMetadata[]>;
+  static fromLanguage(language: SupportedTextSplitterLanguage, options?: Partial<RecursiveCharacterTextSplitterParams>): RecursiveCharacterTextSplitter;
+  static getSeparatorsForLanguage(language: SupportedTextSplitterLanguage): string[];
+}
+export interface TokenTextSplitterParams extends TextSplitterParams {
+  encodingName: tiktoken.TiktokenEncoding;
+  allowedSpecial: "all" | Array<string>;
+  disallowedSpecial: "all" | Array<string>;
+}
+/**
+ * Implementation of splitter which looks at tokens.
+ */
+export declare class TokenTextSplitter extends TextSplitter implements TokenTextSplitterParams {
+  static lc_name(): string;
+  encodingName: tiktoken.TiktokenEncoding;
+  allowedSpecial: "all" | Array<string>;
+  disallowedSpecial: "all" | Array<string>;
+  private tokenizer;
+  constructor(fields?: Partial<TokenTextSplitterParams>);
+  splitText(text: string): Promise<string[]>;
+}
+export type MarkdownTextSplitterParams = TextSplitterParams;
+export declare class MarkdownTextSplitter extends RecursiveCharacterTextSplitter implements MarkdownTextSplitterParams {
+  constructor(fields?: Partial<MarkdownTextSplitterParams>);
+}
+export type LatexTextSplitterParams = TextSplitterParams;
+export declare class LatexTextSplitter extends RecursiveCharacterTextSplitter implements LatexTextSplitterParams {
+  constructor(fields?: Partial<LatexTextSplitterParams>);
+}
+export {};

package/dist/textSplitters.js ADDED Viewed

@@ -0,0 +1,751 @@
+// The MIT License
+//
+// Copyright (c) 2023 LangChain
+//
+// Permission is hereby granted, free of charge, to any person obtaining a copy
+// of this software and associated documentation files (the "Software"), to deal
+// in the Software without restriction, including without limitation the rights
+// to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+// copies of the Software, and to permit persons to whom the Software is
+// furnished to do so, subject to the following conditions:
+//
+// The above copyright notice and this permission notice shall be included in
+// all copies or substantial portions of the Software.
+//
+// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+// IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+// AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+// OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+// THE SOFTWARE.
+//
+// Modifications: metadata-aware splitting (position/length/overlap),
+// stripWhitespace option, and splitTextWithMetadata support.
+import { Document, BaseDocumentTransformer } from "@langchain/core/documents";
+import { getEncoding } from "@langchain/core/utils/tiktoken";
+export class TextSplitter extends BaseDocumentTransformer {
+  lc_namespace = ["langchain", "document_transformers", "text_splitters"];
+  chunkSize = 1000;
+  chunkOverlap = 200;
+  keepSeparator = false;
+  stripWhitespace = true;
+  lengthFunction;
+  constructor(fields) {
+    super(fields);
+    this.chunkSize = fields?.chunkSize ?? this.chunkSize;
+    this.chunkOverlap = fields?.chunkOverlap ?? this.chunkOverlap;
+    this.keepSeparator = fields?.keepSeparator ?? this.keepSeparator;
+    this.stripWhitespace = fields?.stripWhitespace ?? this.stripWhitespace;
+    this.lengthFunction =
+    fields?.lengthFunction ?? ((text) => text.length);
+    if (this.chunkOverlap >= this.chunkSize) {
+      throw new Error("Cannot have chunkOverlap >= chunkSize");
+    }
+  }
+  async transformDocuments(documents, chunkHeaderOptions = {}) {
+    return this.splitDocuments(documents, chunkHeaderOptions);
+  }
+  async splitOnSeparator(text, separator, offset = 0) {
+    const chunks = [];
+    if (!separator) {
+      for (let i = 0; i < text.length; i++) {
+        chunks.push({
+          text: text[i],
+          position: offset + i,
+          overlap: 0,
+          length: 1
+        });
+      }
+      return chunks;
+    }
+    const regexEscapedSeparator = separator.replace(/[/\-\\^$*+?.()|[\]{}]/g, "\\$&");
+    const regex = new RegExp(regexEscapedSeparator, "g");
+    let lastIndex = 0;
+    let match;
+    while ((match = regex.exec(text)) !== null) {
+      const chunkText = text.slice(lastIndex, match.index);
+      if (chunkText !== "" || lastIndex === 0) {
+        chunks.push({
+          text: chunkText,
+          position: offset + lastIndex,
+          overlap: 0,
+          length: await this.lengthFunction(chunkText)
+        });
+      }
+      if (this.keepSeparator) {
+        lastIndex = match.index;
+      } else
+      {
+        lastIndex = match.index + match[0].length;
+      }
+    }
+    const chunkText = text.slice(lastIndex);
+    if (lastIndex < text.length) {
+      chunks.push({
+        text: chunkText,
+        position: offset + lastIndex,
+        overlap: 0,
+        length: await this.lengthFunction(chunkText)
+      });
+    }
+    return chunks;
+  }
+  async createDocuments(texts,
+  // eslint-disable-next-line @typescript-eslint/no-explicit-any
+  metadatas = [], chunkHeaderOptions = {}) {
+    // if no metadata is provided, we create an empty one for each text
+    // eslint-disable-next-line @typescript-eslint/no-explicit-any
+    const _metadatas = metadatas.length > 0 ?
+    metadatas :
+    [...Array(texts.length)].map(() => ({}));
+    const { chunkHeader = "", chunkOverlapHeader = "(cont'd) ", appendChunkOverlapHeader = false } = chunkHeaderOptions;
+    const documents = new Array();
+    for (let i = 0; i < texts.length; i += 1) {
+      const text = texts[i];
+      let lineCounterIndex = 1;
+      let prevChunk = null;
+      let indexPrevChunk = -1;
+      for (const chunk of await this.splitText(text)) {
+        let pageContent = chunkHeader;
+        // we need to count the \n that are in the text before getting removed by the splitting
+        const indexChunk = text.indexOf(chunk, indexPrevChunk + 1);
+        if (prevChunk === null) {
+          const newLinesBeforeFirstChunk = this.numberOfNewLines(text, 0, indexChunk);
+          lineCounterIndex += newLinesBeforeFirstChunk;
+        } else
+        {
+          const indexEndPrevChunk = indexPrevChunk + (await this.lengthFunction(prevChunk));
+          if (indexEndPrevChunk < indexChunk) {
+            const numberOfIntermediateNewLines = this.numberOfNewLines(text, indexEndPrevChunk, indexChunk);
+            lineCounterIndex += numberOfIntermediateNewLines;
+          } else
+          if (indexEndPrevChunk > indexChunk) {
+            const numberOfIntermediateNewLines = this.numberOfNewLines(text, indexChunk, indexEndPrevChunk);
+            lineCounterIndex -= numberOfIntermediateNewLines;
+          }
+          if (appendChunkOverlapHeader) {
+            pageContent += chunkOverlapHeader;
+          }
+        }
+        const newLinesCount = this.numberOfNewLines(chunk);
+        const loc = _metadatas[i].loc && typeof _metadatas[i].loc === "object" ?
+        { ..._metadatas[i].loc } :
+        {};
+        loc.lines = {
+          from: lineCounterIndex,
+          to: lineCounterIndex + newLinesCount
+        };
+        const metadataWithLinesNumber = {
+          ..._metadatas[i],
+          loc
+        };
+        pageContent += chunk;
+        documents.push(new Document({
+          pageContent,
+          metadata: metadataWithLinesNumber
+        }));
+        lineCounterIndex += newLinesCount;
+        prevChunk = chunk;
+        indexPrevChunk = indexChunk;
+      }
+    }
+    return documents;
+  }
+  numberOfNewLines(text, start, end) {
+    const textSection = text.slice(start, end);
+    return (textSection.match(/\n/g) || []).length;
+  }
+  async splitDocuments(documents, chunkHeaderOptions = {}) {
+    const selectedDocuments = documents.filter((doc) => doc.pageContent !== undefined);
+    const texts = selectedDocuments.map((doc) => doc.pageContent);
+    const metadatas = selectedDocuments.map((doc) => doc.metadata);
+    return this.createDocuments(texts, metadatas, chunkHeaderOptions);
+  }
+  async joinDocs(docs, separator) {
+    const texts = docs.map((doc) => doc.text);
+    let text = texts.join(separator);
+    if (this.stripWhitespace) {
+      text = text.trim();
+    }
+    const length = await this.lengthFunction(text);
+    const chunkWithMetadata = {
+      text,
+      position: docs[0].position,
+      overlap: 0,
+      length
+    };
+    return text === "" ? null : chunkWithMetadata;
+  }
+  async mergeSplits(splits, separator) {
+    const docs = [];
+    const currentDoc = [];
+    let lastMergedDoc = [];
+    const mergingDocs = [];
+    let total = 0;
+    for (let i = 0; i < splits.length; i++) {
+      const d = splits[i];
+      const _len = d.length;
+      if (total + _len + currentDoc.length * separator.length >
+      this.chunkSize) {
+        if (total > this.chunkSize) {
+          console.warn(`Created a chunk of size ${total}, +
+which is longer than the specified ${this.chunkSize}`);
+        }
+        if (currentDoc.length > 0) {
+          const doc = await this.joinDocs(currentDoc, separator);
+          if (doc !== null) {
+            const overlapChunks = lastMergedDoc.filter((index) => mergingDocs.includes(index));
+            const overlapLength = overlapChunks.reduce((acc, index) => acc + splits[index].length, 0);
+            doc.overlap = overlapLength;
+            docs.push(doc);
+            lastMergedDoc = [...mergingDocs];
+          }
+          // Keep on popping if:
+          // - we have a larger chunk than in the chunk overlap
+          // - or if we still have any chunks and the length is long
+          while (total > this.chunkOverlap ||
+          total + _len + currentDoc.length * separator.length >
+          this.chunkSize &&
+          total > 0) {
+            total -= currentDoc[0].length;
+            currentDoc.shift();
+            mergingDocs.shift();
+          }
+        }
+      }
+      currentDoc.push(d);
+      mergingDocs.push(i);
+      total += _len;
+    }
+    const doc = await this.joinDocs(currentDoc, separator);
+    if (doc !== null) {
+      const overlapChunks = lastMergedDoc.filter((index) => mergingDocs.includes(index));
+      const overlapLength = overlapChunks.reduce((acc, index) => acc + splits[index].length, 0);
+      doc.overlap = overlapLength;
+      docs.push(doc);
+    }
+    return docs;
+  }
+}
+export class CharacterTextSplitter extends TextSplitter {
+  static lc_name() {
+    return "CharacterTextSplitter";
+  }
+  separator = "\n\n";
+  constructor(fields) {
+    super(fields);
+    this.separator = fields?.separator ?? this.separator;
+  }
+  async splitText(text) {
+    // First we naively split the large input into a bunch of smaller ones.
+    const splits = await this.splitOnSeparator(text, this.separator);
+    return (await this.mergeSplits(splits, this.keepSeparator ? "" : this.separator)).map((chunk) => chunk.text);
+  }
+}
+export const SupportedTextSplitterLanguages = [
+"cpp",
+"go",
+"java",
+"js",
+"php",
+"proto",
+"python",
+"rst",
+"ruby",
+"rust",
+"scala",
+"swift",
+"markdown",
+"latex",
+"html",
+"sol"];
+export class RecursiveCharacterTextSplitter extends TextSplitter {
+  static lc_name() {
+    return "RecursiveCharacterTextSplitter";
+  }
+  separators = ["\n\n", "\n", " ", ""];
+  constructor(fields) {
+    super(fields);
+    this.separators = fields?.separators ?? this.separators;
+    this.keepSeparator = fields?.keepSeparator ?? true;
+  }
+  async _splitText(chunk, separators, offset = 0) {
+    const finalChunks = [];
+    // Get appropriate separator to use
+    let separator = separators[separators.length - 1];
+    let newSeparators;
+    for (let i = 0; i < separators.length; i += 1) {
+      const s = separators[i];
+      if (s === "") {
+        separator = s;
+        break;
+      }
+      if (chunk.text.includes(s)) {
+        separator = s;
+        newSeparators = separators.slice(i + 1);
+        break;
+      }
+    }
+    // Now that we have the separator, split the text
+    const splits = await this.splitOnSeparator(chunk.text, separator, offset);
+    // Now go merging things, recursively splitting longer texts.
+    let goodSplits = [];
+    const _separator = this.keepSeparator ? "" : separator;
+    for (const s of splits) {
+      if (s.length < this.chunkSize) {
+        goodSplits.push(s);
+      } else
+      {
+        if (goodSplits.length) {
+          const mergedText = await this.mergeSplits(goodSplits, _separator);
+          finalChunks.push(...mergedText);
+          goodSplits = [];
+        }
+        if (!newSeparators) {
+          finalChunks.push(s);
+        } else
+        {
+          const otherInfo = await this._splitText(s, newSeparators, s.position);
+          finalChunks.push(...otherInfo);
+        }
+      }
+    }
+    if (goodSplits.length) {
+      const mergedText = await this.mergeSplits(goodSplits, _separator);
+      finalChunks.push(...mergedText);
+    }
+    return finalChunks;
+  }
+  async splitText(text) {
+    const splits = (await this._splitText({ text, position: 0, overlap: 0, length: text.length }, this.separators)).map((chunk) => chunk.text);
+    return splits;
+  }
+  async splitTextWithMetadata(text) {
+    if (this.stripWhitespace === true || this.keepSeparator === false) {
+      console.warn("Might not produce correct results when stripWhitespace = true and keepSeparator = false");
+    }
+    const splits = await this._splitText({ text, position: 0, overlap: 0, length: text.length }, this.separators);
+    return splits;
+  }
+  static fromLanguage(language, options) {
+    return new RecursiveCharacterTextSplitter({
+      ...options,
+      separators: RecursiveCharacterTextSplitter.getSeparatorsForLanguage(language)
+    });
+  }
+  static getSeparatorsForLanguage(language) {
+    if (language === "cpp") {
+      return [
+      // Split along class definitions
+      "\nclass ",
+      // Split along function definitions
+      "\nvoid ",
+      "\nint ",
+      "\nfloat ",
+      "\ndouble ",
+      // Split along control flow statements
+      "\nif ",
+      "\nfor ",
+      "\nwhile ",
+      "\nswitch ",
+      "\ncase ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "go") {
+      return [
+      // Split along function definitions
+      "\nfunc ",
+      "\nvar ",
+      "\nconst ",
+      "\ntype ",
+      // Split along control flow statements
+      "\nif ",
+      "\nfor ",
+      "\nswitch ",
+      "\ncase ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "java") {
+      return [
+      // Split along class definitions
+      "\nclass ",
+      // Split along method definitions
+      "\npublic ",
+      "\nprotected ",
+      "\nprivate ",
+      "\nstatic ",
+      // Split along control flow statements
+      "\nif ",
+      "\nfor ",
+      "\nwhile ",
+      "\nswitch ",
+      "\ncase ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "js") {
+      return [
+      // Split along function definitions
+      "\nfunction ",
+      "\nconst ",
+      "\nlet ",
+      "\nvar ",
+      "\nclass ",
+      // Split along control flow statements
+      "\nif ",
+      "\nfor ",
+      "\nwhile ",
+      "\nswitch ",
+      "\ncase ",
+      "\ndefault ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "php") {
+      return [
+      // Split along function definitions
+      "\nfunction ",
+      // Split along class definitions
+      "\nclass ",
+      // Split along control flow statements
+      "\nif ",
+      "\nforeach ",
+      "\nwhile ",
+      "\ndo ",
+      "\nswitch ",
+      "\ncase ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "proto") {
+      return [
+      // Split along message definitions
+      "\nmessage ",
+      // Split along service definitions
+      "\nservice ",
+      // Split along enum definitions
+      "\nenum ",
+      // Split along option definitions
+      "\noption ",
+      // Split along import statements
+      "\nimport ",
+      // Split along syntax declarations
+      "\nsyntax ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "python") {
+      return [
+      // First, try to split along class definitions
+      "\nclass ",
+      "\ndef ",
+      "\n\tdef ",
+      // Now split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "rst") {
+      return [
+      // Split along section titles
+      "\n===\n",
+      "\n---\n",
+      "\n***\n",
+      // Split along directive markers
+      "\n.. ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "ruby") {
+      return [
+      // Split along method definitions
+      "\ndef ",
+      "\nclass ",
+      // Split along control flow statements
+      "\nif ",
+      "\nunless ",
+      "\nwhile ",
+      "\nfor ",
+      "\ndo ",
+      "\nbegin ",
+      "\nrescue ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "rust") {
+      return [
+      // Split along function definitions
+      "\nfn ",
+      "\nconst ",
+      "\nlet ",
+      // Split along control flow statements
+      "\nif ",
+      "\nwhile ",
+      "\nfor ",
+      "\nloop ",
+      "\nmatch ",
+      "\nconst ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "scala") {
+      return [
+      // Split along class definitions
+      "\nclass ",
+      "\nobject ",
+      // Split along method definitions
+      "\ndef ",
+      "\nval ",
+      "\nvar ",
+      // Split along control flow statements
+      "\nif ",
+      "\nfor ",
+      "\nwhile ",
+      "\nmatch ",
+      "\ncase ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "swift") {
+      return [
+      // Split along function definitions
+      "\nfunc ",
+      // Split along class definitions
+      "\nclass ",
+      "\nstruct ",
+      "\nenum ",
+      // Split along control flow statements
+      "\nif ",
+      "\nfor ",
+      "\nwhile ",
+      "\ndo ",
+      "\nswitch ",
+      "\ncase ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "markdown") {
+      return [
+      // First, try to split along Markdown headings (starting with level 2)
+      "\n## ",
+      "\n### ",
+      "\n#### ",
+      "\n##### ",
+      "\n###### ",
+      // Note the alternative syntax for headings (below) is not handled here
+      // Heading level 2
+      // ---------------
+      // End of code block
+      "```\n\n",
+      // Horizontal lines
+      "\n\n***\n\n",
+      "\n\n---\n\n",
+      "\n\n___\n\n",
+      // Note that this splitter doesn't handle horizontal lines defined
+      // by *three or more* of ***, ---, or ___, but this is not handled
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "latex") {
+      return [
+      // First, try to split along Latex sections
+      "\n\\chapter{",
+      "\n\\section{",
+      "\n\\subsection{",
+      "\n\\subsubsection{",
+      // Now split by environments
+      "\n\\begin{enumerate}",
+      "\n\\begin{itemize}",
+      "\n\\begin{description}",
+      "\n\\begin{list}",
+      "\n\\begin{quote}",
+      "\n\\begin{quotation}",
+      "\n\\begin{verse}",
+      "\n\\begin{verbatim}",
+      // Now split by math environments
+      "\n\\begin{align}",
+      "$$",
+      "$",
+      // Now split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    if (language === "html") {
+      return [
+      // First, try to split along HTML tags
+      "<body>",
+      "<div>",
+      "<p>",
+      "<br>",
+      "<li>",
+      "<h1>",
+      "<h2>",
+      "<h3>",
+      "<h4>",
+      "<h5>",
+      "<h6>",
+      "<span>",
+      "<table>",
+      "<tr>",
+      "<td>",
+      "<th>",
+      "<ul>",
+      "<ol>",
+      "<header>",
+      "<footer>",
+      "<nav>",
+      // Head
+      "<head>",
+      "<style>",
+      "<script>",
+      "<meta>",
+      "<title>",
+      // Normal type of lines
+      " ",
+      ""];
+    } else
+    if (language === "sol") {
+      return [
+      // Split along compiler informations definitions
+      "\npragma ",
+      "\nusing ",
+      // Split along contract definitions
+      "\ncontract ",
+      "\ninterface ",
+      "\nlibrary ",
+      // Split along method definitions
+      "\nconstructor ",
+      "\ntype ",
+      "\nfunction ",
+      "\nevent ",
+      "\nmodifier ",
+      "\nerror ",
+      "\nstruct ",
+      "\nenum ",
+      // Split along control flow statements
+      "\nif ",
+      "\nfor ",
+      "\nwhile ",
+      "\ndo while ",
+      "\nassembly ",
+      // Split by the normal type of lines
+      "\n\n",
+      "\n",
+      " ",
+      ""];
+    } else
+    {
+      throw new Error(`Language ${language} is not supported.`);
+    }
+  }
+}
+/**
+ * Implementation of splitter which looks at tokens.
+ */
+export class TokenTextSplitter extends TextSplitter {
+  static lc_name() {
+    return "TokenTextSplitter";
+  }
+  encodingName;
+  allowedSpecial;
+  disallowedSpecial;
+  tokenizer;
+  constructor(fields) {
+    super(fields);
+    this.encodingName = fields?.encodingName ?? "gpt2";
+    this.allowedSpecial = fields?.allowedSpecial ?? [];
+    this.disallowedSpecial = fields?.disallowedSpecial ?? "all";
+  }
+  async splitText(text) {
+    if (!this.tokenizer) {
+      this.tokenizer = await getEncoding(this.encodingName);
+    }
+    const splits = [];
+    const input_ids = this.tokenizer.encode(text, this.allowedSpecial, this.disallowedSpecial);
+    let start_idx = 0;
+    while (start_idx < input_ids.length) {
+      if (start_idx > 0) {
+        start_idx -= this.chunkOverlap;
+      }
+      const end_idx = Math.min(start_idx + this.chunkSize, input_ids.length);
+      const chunk_ids = input_ids.slice(start_idx, end_idx);
+      splits.push(this.tokenizer.decode(chunk_ids));
+      start_idx = end_idx;
+    }
+    return splits;
+  }
+}
+export class MarkdownTextSplitter extends RecursiveCharacterTextSplitter {
+  constructor(fields) {
+    super({
+      ...fields,
+      separators: RecursiveCharacterTextSplitter.getSeparatorsForLanguage("markdown")
+    });
+  }
+}
+export class LatexTextSplitter extends RecursiveCharacterTextSplitter {
+  constructor(fields) {
+    super({
+      ...fields,
+      separators: RecursiveCharacterTextSplitter.getSeparatorsForLanguage("latex")
+    });
+  }
+}

package/dist/textSplitters.js.map ADDED Viewed

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+ 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package/package.json CHANGED Viewed

@@ -1,7 +1,7 @@
 {
   "name": "@magda/semantic-indexer-framework",
   "description": "MAGDA Semantic Indexer Framework",
-  "version": "5.2.0",
+  "version": "6.0.0-alpha.12",
   "type": "module",
   "exports": {
     ".": "./dist/index.js",
@@ -22,7 +22,7 @@
   "author": "",
   "license": "Apache-2.0",
   "devDependencies": {
-    "@magda/scripts": "^5.2.0",
+    "@magda/scripts": "^6.0.0-alpha.12",
     "@types/chai": "^4.3.11",
     "@types/mocha": "^10.0.6",
     "@types/uuid": "^8.0.0",
@@ -33,10 +33,9 @@
   },
   "dependencies": {
     "@langchain/core": "^0.3.57",
-    "@langchain/textsplitters": "https://gitpkg.vercel.app/JHZhang2736/langchainjs/libs/langchain-textsplitters?textsplitters-build",
     "@magda/esm-utils": "^1.0.1",
-    "@magda/minion-framework": "^5.2.0",
-    "@magda/typescript-common": "^5.2.0",
+    "@magda/minion-framework": "^6.0.0-alpha.12",
+    "@magda/typescript-common": "^6.0.0-alpha.12",
     "@types/lodash": "^4.17.17",
     "cross-fetch": "^4.0.0",
     "minio": "^8.0.5",