@macrostrat/map-interface 1.5.7 → 2.0.0

package/dist/location-details/macrostrat-linked.cjs

@@ -0,0 +1,355 @@
+"use strict";
+Object.defineProperty(exports, Symbol.toStringTag, { value: "Module" });
+const h$1 = require("@macrostrat/hyper");
+const mapInterface = require("@macrostrat/map-interface");
+const main_module = require("./main.module.sass.cjs");
+const scale = require("@visx/scale");
+const axis = require("@visx/axis");
+const chroma = require("chroma-js");
+const dataComponents = require("@macrostrat/data-components");
+const infoBlocks = require("./info-blocks.cjs");
+const h = h$1.styled(main_module.default);
+function MacrostratLinkedData(props) {
+  const {
+    mapInfo,
+    source,
+    stratNameURL,
+    environmentURL,
+    intervalURL,
+    lithologyURL,
+    expanded = true
+  } = props;
+  if (!mapInfo.mapData[0]) return null;
+  return h(
+    mapInterface.ExpansionPanel,
+    {
+      className: "regional-panel",
+      title: "Macrostrat-linked data",
+      helpText: "via Macrostrat",
+      expanded
+    },
+    [
+      h("div", { classes: expansionPanelDetailClasses }, [
+        h(MatchBasis, { source, stratNameURL }),
+        h(AgeInformation, { mapInfo, source, intervalURL }),
+        h(Thickness, { source }),
+        h(MinorFossilCollections, { source }),
+        h(FossilOccs, { source }),
+        h(LithsAndClasses, { source, lithologyURL }),
+        h(Environments, { source, environmentURL }),
+        h(Economy, { source })
+      ])
+    ]
+  );
+}
+const expansionPanelDetailClasses = {
+  root: "expansion-panel-detail"
+};
+function AgeInformation(props) {
+  const { source, mapInfo, intervalURL } = props;
+  const { macrostrat } = source;
+  if (!macrostrat?.b_age) return h(MapAgeRenderer, { mapInfo, intervalURL });
+  return h(MacrostratAgeInfo, { macrostrat, mapInfo, intervalURL });
+}
+function MapAgeRenderer(props) {
+  const { mapInfo, intervalURL, ...rest } = props;
+  return h(
+    DescribedAgeInfo,
+    {
+      ageElement: h(infoBlocks.AgeChip, {
+        b_int: mapInfo.mapData[0].b_int,
+        t_int: mapInfo.mapData[0].t_int,
+        intervalURL
+      })
+    },
+    "Based on geologic map description."
+  );
+}
+function DescribedAgeInfo(props) {
+  const { ageElement, children, className } = props;
+  return h("div.described-age.macrostrast-detail", [
+    h("div.expansion-summary-title", "Age"),
+    h("div.age-chips", null, ageElement),
+    h("div.description", children)
+  ]);
+}
+function AgeRefinementBar({ scale: scale2, data, color, label = null }) {
+  const { b_int, t_int } = data;
+  const b_age = data.b_age ?? b_int.b_age;
+  const t_age = data.t_age ?? t_int.t_age;
+  const backgroundColor = color ?? b_int.color;
+  const accentColor = chroma(backgroundColor).darken(0.5).hex();
+  const labelColor = chroma(backgroundColor).darken(2).hex();
+  const left = scale2(b_age);
+  const width = scale2(t_age) - scale2(b_age);
+  let labelTranslate = 5;
+  let textAlign = "start";
+  if (width < 100) {
+    if (left < 100) {
+      labelTranslate = width + 5;
+    } else {
+      labelTranslate = -305;
+      textAlign = "end";
+    }
+  }
+  return h(
+    "div.age-refinement-bar",
+    {
+      style: {
+        marginLeft: `${left}px`,
+        width: `${width}px`,
+        height: "18px",
+        backgroundColor,
+        border: `2px solid ${accentColor}`,
+        position: "relative"
+      }
+    },
+    h(
+      "div.age-refinement-bar-label",
+      {
+        style: {
+          transform: `translateX(${labelTranslate}px)`,
+          color: labelColor,
+          fontSize: "10px",
+          width: 300,
+          textAlign
+        }
+      },
+      label
+    )
+  );
+}
+function AgeRefinementPlot({ macrostrat, mapInfo, intervalURL }) {
+  const mapData = mapInfo.mapData[0];
+  const b_age = Math.max(mapData.b_int.b_age, macrostrat.b_age);
+  const t_age = Math.min(mapData.t_int.t_age, macrostrat.t_age);
+  const scale$1 = scale.scaleLinear({
+    domain: [1.02 * b_age, t_age * 0.98],
+    range: [20, 360]
+  });
+  return h("div.age-refinement-plot", [
+    h(AgeRefinementBar, {
+      scale: scale$1,
+      data: macrostrat,
+      label: "Macrostrat age model"
+    }),
+    h(AgeRefinementBar, {
+      scale: scale$1,
+      data: mapData,
+      label: "Map legend"
+    }),
+    // Age axis
+    h("svg", { width: "100%", height: "40px" }, [
+      h(axis.AxisBottom, {
+        scale: scale$1,
+        numTicks: 5,
+        top: 1,
+        left: 0,
+        label: "Age (Ma)"
+      })
+    ])
+  ]);
+}
+function MacrostratAgeInfoCore({ macrostrat, intervalURL }) {
+  const { b_age, t_age, b_int, t_int } = macrostrat;
+  if (!b_age) return null;
+  let age = b_int.int_name;
+  if (b_int.int_id !== t_int.int_id) {
+    age += ` - ${t_int.int_name}`;
+  }
+  return h(
+    DescribedAgeInfo,
+    {
+      ageElement: h(infoBlocks.AgeChip, {
+        b_int: { ...b_int, int_name: age, b_age, t_age },
+        t_int: { ...b_int, int_name: age, b_age, t_age },
+        intervalURL
+      })
+    },
+    "Refined using the Macrostrat age model."
+  );
+}
+function MacrostratAgeInfo(props) {
+  return h(
+    mapInterface.ExpandableDetailsPanel,
+    { headerElement: h(MacrostratAgeInfoCore, props) },
+    h(mapInterface.ExpansionBody, { title: "Age refinement" }, h(AgeRefinementPlot, props))
+  );
+}
+function MatchBasis(props) {
+  const { source, stratNameURL } = props;
+  if (!source.macrostrat?.strat_names) return null;
+  return h(
+    mapInterface.ExpandableDetailsPanel,
+    {
+      className: "macrostrat-unit",
+      headerElement: h([
+        h("h3", source.macrostrat.strat_names[0].rank_name),
+        h("div.description", "Matched stratigraphic unit")
+      ])
+    },
+    h(mapInterface.ExpansionBody, { title: "All matched names" }, [
+      source.macrostrat.strat_names?.map((name, i) => {
+        let lastElement = i == source.macrostrat.strat_names.length - 1;
+        return h("span", { key: i }, [
+          h(
+            "a.externalLink",
+            {
+              href: stratNameURL + "/" + name.strat_name_id,
+              key: i
+            },
+            [name.rank_name]
+          ),
+          h.if(!lastElement)([", "])
+        ]);
+      })
+    ])
+  );
+}
+function Thickness(props) {
+  const { source } = props;
+  if (!source.macrostrat.max_thick) return h("div");
+  return h.if(source.macrostrat && source.macrostrat.max_thick)(
+    "div.macrostrat-detail",
+    [
+      h("div.expansion-summary-title", "Thickness"),
+      h("div", [
+        source.macrostrat.min_min_thick,
+        " - ",
+        source.macrostrat.max_thick,
+        "m"
+      ])
+    ]
+  );
+}
+function MinorFossilCollections(props) {
+  const { source } = props;
+  const { macrostrat } = source;
+  if (!macrostrat.pbdb_collections) return h("div");
+  return h.if(macrostrat && macrostrat.pbdb_collections)(
+    "div.macrostrat-detail",
+    [
+      h("div.expansion-summary-title", "Fossil collections"),
+      h("div", [macrostrat.pbdb_collections])
+    ]
+  );
+}
+function FossilOccs(props) {
+  const { source } = props;
+  const { macrostrat } = source;
+  if (!macrostrat?.pbdb_occs) return null;
+  return h("div.macrostrat-detail", [
+    h("div.expansion-summary-title", "Fossil occurrences"),
+    h("div", [macrostrat.pbdb_occs])
+  ]);
+}
+function LithTypes(props) {
+  const { lith_types } = props;
+  return h.if(lith_types && lith_types.length > 0)(
+    "div.lithologies.lithology-types",
+    [
+      h(dataComponents.LithologyList, {
+        lithologies: lith_types
+      })
+    ]
+  );
+}
+function LithsAndClasses(props) {
+  const { source, lithologyURL } = props;
+  const { macrostrat } = source;
+  const { liths = null, lith_types = null } = macrostrat;
+  if (!liths || liths.length == 0) return null;
+  const lithologies = liths?.map((lith) => {
+    return {
+      ...lith,
+      name: lith.lith,
+      color: lith.color || "#000000"
+    };
+  });
+  return h(
+    mapInterface.ExpandableDetailsPanel,
+    {
+      title: "Lithology",
+      value: h(LithTypes, { lith_types })
+    },
+    h(mapInterface.ExpansionBody, { title: "Matched lithologies" }, [
+      h(dataComponents.LithologyList, {
+        lithologies,
+        onClickItem: (e, lith) => {
+          window.open(lithologyURL + "/" + lith.lith_id, "_self");
+        }
+      })
+    ])
+  );
+}
+function EnvironTypes(props) {
+  const { environ_types } = props;
+  return h.if(environ_types && environ_types.length > 0)(dataComponents.LithologyList, {
+    lithologies: environ_types?.filter((e) => e.name != "")
+  });
+}
+function Environments(props) {
+  const { source, environmentURL } = props;
+  const { macrostrat } = source;
+  const { environs = null, environ_types = null } = macrostrat;
+  if (!environs || environs.length == 0) return null;
+  const lithologies = environs?.map((environ) => {
+    return {
+      ...environ,
+      name: environ.environ,
+      color: environ.color || "#000000"
+    };
+  });
+  return h(
+    mapInterface.ExpandableDetailsPanel,
+    {
+      title: "Environment",
+      value: h(EnvironTypes, { environ_types })
+    },
+    h(mapInterface.ExpansionBody, { title: "Matched environments" }, [
+      h(dataComponents.LithologyList, {
+        lithologies,
+        onClickItem: (e, environ) => {
+          console.log("environ", environmentURL);
+          window.open(environmentURL + "/" + environ.environ_id, "_self");
+        }
+      })
+    ])
+  );
+}
+function EconType(props) {
+  const { econ_types } = props;
+  return h.if(econ_types && econ_types.length > 0)("div", [
+    econ_types?.map((econClass, i) => {
+      return h(infoBlocks.AttrChip, {
+        key: i,
+        name: econClass.name,
+        color: econClass.color
+      });
+    })
+  ]);
+}
+function Economy(props) {
+  const { source } = props;
+  const { macrostrat } = source;
+  const { econs = null, econ_types = null } = macrostrat;
+  if (!econs) return h("div");
+  return h.if(econs && econs.length > 0)(
+    mapInterface.ExpandableDetailsPanel,
+    {
+      title: "Economy ",
+      value: h(EconType, { econ_types })
+    },
+    h(mapInterface.ExpansionBody, { title: "Matched economic attributes" }, [
+      econs?.map((econ, i) => {
+        return h(infoBlocks.AttrChip, {
+          key: i,
+          name: econ.econ,
+          color: econ.color
+        });
+      })
+    ])
+  );
+}
+exports.MacrostratLinkedData = MacrostratLinkedData;
+//# sourceMappingURL=macrostrat-linked.cjs.map

package/dist/location-details/macrostrat-linked.cjs.map

@@ -0,0 +1 @@
+{"version":3,"file":"macrostrat-linked.cjs","sources":["../../src/location-details/macrostrat-linked.ts"],"sourcesContent":["import hyper from \"@macrostrat/hyper\";\nimport {\n  ExpansionPanel,\n  ExpandableDetailsPanel,\n  ExpansionBody,\n} from \"@macrostrat/map-interface\";\nimport styles from \"./main.module.sass\";\nimport { scaleLinear } from \"@visx/scale\";\nimport { AxisBottom } from \"@visx/axis\";\nimport chroma from \"chroma-js\";\nimport { LithologyList } from \"@macrostrat/data-components\";\nimport { AttrChip, AgeChip } from \"./info-blocks\";\n\nconst h = hyper.styled(styles);\n\nexport function MacrostratLinkedData(props) {\n  const {\n    mapInfo,\n    source,\n    stratNameURL,\n    environmentURL,\n    intervalURL,\n    lithologyURL,\n    expanded = true,\n  } = props;\n\n  if (!mapInfo.mapData[0]) return null;\n\n  return h(\n    ExpansionPanel,\n    {\n      className: \"regional-panel\",\n      title: \"Macrostrat-linked data\",\n      helpText: \"via Macrostrat\",\n      expanded,\n    },\n    [\n      h(\"div\", { classes: expansionPanelDetailClasses }, [\n        h(MatchBasis, { source, stratNameURL }),\n        h(AgeInformation, { mapInfo, source, intervalURL }),\n        h(Thickness, { source }),\n        h(MinorFossilCollections, { source }),\n        h(FossilOccs, { source }),\n        h(LithsAndClasses, { source, lithologyURL }),\n        h(Environments, { source, environmentURL }),\n        h(Economy, { source }),\n      ]),\n    ],\n  );\n}\n\nconst expansionPanelDetailClasses = {\n  root: \"expansion-panel-detail\",\n};\n\nfunction AgeInformation(props) {\n  const { source, mapInfo, intervalURL } = props;\n  const { macrostrat } = source;\n\n  if (!macrostrat?.b_age) return h(MapAgeRenderer, { mapInfo, intervalURL });\n\n  return h(MacrostratAgeInfo, { macrostrat, mapInfo, intervalURL });\n}\n\nfunction MapAgeRenderer(props) {\n  const { mapInfo, intervalURL, ...rest } = props;\n  return h(\n    DescribedAgeInfo,\n    {\n      ageElement: h(AgeChip, {\n        b_int: mapInfo.mapData[0].b_int,\n        t_int: mapInfo.mapData[0].t_int,\n        intervalURL,\n      }),\n    },\n    \"Based on geologic map description.\",\n  );\n}\n\nfunction DescribedAgeInfo(props) {\n  const { ageElement, children, className } = props;\n\n  return h(\"div.described-age.macrostrast-detail\", [\n    h(\"div.expansion-summary-title\", \"Age\"),\n    h(\"div.age-chips\", null, ageElement),\n    h(\"div.description\", children),\n  ]);\n}\n\nfunction AgeRefinementBar({ scale, data, color, label = null }) {\n  const { b_int, t_int } = data;\n  const b_age = data.b_age ?? b_int.b_age;\n  const t_age = data.t_age ?? t_int.t_age;\n  const backgroundColor = color ?? b_int.color;\n  const accentColor = chroma(backgroundColor).darken(0.5).hex();\n  const labelColor = chroma(backgroundColor).darken(2).hex();\n\n  const left = scale(b_age);\n  const width = scale(t_age) - scale(b_age);\n\n  let labelTranslate = 5;\n  let textAlign = \"start\";\n\n  // Adjust label placement\n\n  if (width < 100) {\n    if (left < 100) {\n      labelTranslate = width + 5;\n    } else {\n      labelTranslate = -305;\n      textAlign = \"end\";\n    }\n  }\n\n  return h(\n    \"div.age-refinement-bar\",\n    {\n      style: {\n        marginLeft: `${left}px`,\n        width: `${width}px`,\n        height: \"18px\",\n        backgroundColor,\n        border: `2px solid ${accentColor}`,\n        position: \"relative\",\n      },\n    },\n    h(\n      \"div.age-refinement-bar-label\",\n      {\n        style: {\n          transform: `translateX(${labelTranslate}px)`,\n          color: labelColor,\n          fontSize: \"10px\",\n          width: 300,\n          textAlign,\n        },\n      },\n      label,\n    ),\n  );\n}\n\nfunction AgeRefinementPlot({ macrostrat, mapInfo, intervalURL }) {\n  // Plot the amount by which the age was refined\n\n  const mapData = mapInfo.mapData[0];\n  const b_age = Math.max(mapData.b_int.b_age, macrostrat.b_age);\n  const t_age = Math.min(mapData.t_int.t_age, macrostrat.t_age);\n\n  const scale = scaleLinear({\n    domain: [1.02 * b_age, t_age * 0.98],\n    range: [20, 360],\n  });\n\n  // use visx to plot the age refinement\n  return h(\"div.age-refinement-plot\", [\n    h(AgeRefinementBar, {\n      scale,\n      data: macrostrat,\n      label: \"Macrostrat age model\",\n    }),\n    h(AgeRefinementBar, {\n      scale,\n      data: mapData,\n      label: \"Map legend\",\n    }),\n    // Age axis\n    h(\"svg\", { width: \"100%\", height: \"40px\" }, [\n      h(AxisBottom, {\n        scale,\n        numTicks: 5,\n        top: 1,\n        left: 0,\n        label: \"Age (Ma)\",\n      }),\n    ]),\n  ]);\n}\n\nfunction MacrostratAgeInfoCore({ macrostrat, intervalURL }) {\n  const { b_age, t_age, b_int, t_int } = macrostrat;\n\n  if (!b_age) return null;\n\n  let age = b_int.int_name;\n  if (b_int.int_id !== t_int.int_id) {\n    age += ` - ${t_int.int_name}`;\n  }\n  return h(\n    DescribedAgeInfo,\n    {\n      ageElement: h(AgeChip, {\n        b_int: { ...b_int, int_name: age, b_age, t_age },\n        t_int: { ...b_int, int_name: age, b_age, t_age },\n        intervalURL,\n      }),\n    },\n    \"Refined using the Macrostrat age model.\",\n  );\n}\n\nfunction MacrostratAgeInfo(props) {\n  return h(\n    ExpandableDetailsPanel,\n    { headerElement: h(MacrostratAgeInfoCore, props) },\n    h(ExpansionBody, { title: \"Age refinement\" }, h(AgeRefinementPlot, props)),\n  );\n}\n\nfunction MatchBasis(props) {\n  const { source, stratNameURL } = props;\n  if (!source.macrostrat?.strat_names) return null;\n\n  return h(\n    ExpandableDetailsPanel,\n    {\n      className: \"macrostrat-unit\",\n      headerElement: h([\n        h(\"h3\", source.macrostrat.strat_names[0].rank_name),\n        h(\"div.description\", \"Matched stratigraphic unit\"),\n      ]),\n    },\n    h(ExpansionBody, { title: \"All matched names\" }, [\n      source.macrostrat.strat_names?.map((name, i) => {\n        let lastElement: boolean =\n          i == source.macrostrat.strat_names.length - 1;\n        return h(\"span\", { key: i }, [\n          h(\n            \"a.externalLink\",\n            {\n              href: stratNameURL + \"/\" + name.strat_name_id,\n              key: i,\n            },\n            [name.rank_name],\n          ),\n          h.if(!lastElement)([\", \"]),\n        ]);\n      }),\n    ]),\n  );\n}\n\nfunction Thickness(props) {\n  const { source } = props;\n  if (!source.macrostrat.max_thick) return h(\"div\");\n\n  return h.if(source.macrostrat && source.macrostrat.max_thick)(\n    \"div.macrostrat-detail\",\n    [\n      h(\"div.expansion-summary-title\", \"Thickness\"),\n      h(\"div\", [\n        source.macrostrat.min_min_thick,\n        \" - \",\n        source.macrostrat.max_thick,\n        \"m\",\n      ]),\n    ],\n  );\n}\n\nfunction MinorFossilCollections(props) {\n  const { source } = props;\n  const { macrostrat } = source;\n  if (!macrostrat.pbdb_collections) return h(\"div\");\n\n  return h.if(macrostrat && macrostrat.pbdb_collections)(\n    \"div.macrostrat-detail\",\n    [\n      h(\"div.expansion-summary-title\", \"Fossil collections\"),\n      h(\"div\", [macrostrat.pbdb_collections]),\n    ],\n  );\n}\n\nfunction FossilOccs(props) {\n  const { source } = props;\n  const { macrostrat } = source;\n\n  if (!macrostrat?.pbdb_occs) return null;\n\n  return h(\"div.macrostrat-detail\", [\n    h(\"div.expansion-summary-title\", \"Fossil occurrences\"),\n    h(\"div\", [macrostrat.pbdb_occs]),\n  ]);\n}\n\nfunction LithTypes(props) {\n  const { lith_types } = props;\n\n  return h.if(lith_types && lith_types.length > 0)(\n    \"div.lithologies.lithology-types\",\n    [\n      h(LithologyList, {\n        lithologies: lith_types,\n      }),\n    ],\n  );\n}\n\nfunction LithsAndClasses(props) {\n  const { source, lithologyURL } = props;\n  const { macrostrat } = source;\n  const { liths = null, lith_types = null } = macrostrat;\n\n  if (!liths || liths.length == 0) return null;\n\n  const lithologies = liths?.map((lith) => {\n    return {\n      ...lith,\n      name: lith.lith,\n      color: lith.color || \"#000000\",\n    };\n  });\n\n  return h(\n    ExpandableDetailsPanel,\n    {\n      title: \"Lithology\",\n      value: h(LithTypes, { lith_types }),\n    },\n    h(ExpansionBody, { title: \"Matched lithologies\" }, [\n      h(LithologyList, {\n        lithologies,\n        onClickItem: (e, lith) => {\n          window.open(lithologyURL + \"/\" + lith.lith_id, \"_self\");\n        },\n      }),\n    ]),\n  );\n}\n\nfunction EnvironTypes(props) {\n  const { environ_types } = props;\n  return h.if(environ_types && environ_types.length > 0)(LithologyList, {\n    lithologies: environ_types?.filter((e) => e.name != \"\"),\n  });\n}\n\nfunction Environments(props) {\n  const { source, environmentURL } = props;\n  const { macrostrat } = source;\n  const { environs = null, environ_types = null } = macrostrat;\n\n  if (!environs || environs.length == 0) return null;\n\n  const lithologies = environs?.map((environ) => {\n    return {\n      ...environ,\n      name: environ.environ,\n      color: environ.color || \"#000000\",\n    };\n  });\n\n  return h(\n    ExpandableDetailsPanel,\n    {\n      title: \"Environment\",\n      value: h(EnvironTypes, { environ_types }),\n    },\n    h(ExpansionBody, { title: \"Matched environments\" }, [\n      h(LithologyList, {\n        lithologies,\n        onClickItem: (e, environ) => {\n          console.log(\"environ\", environmentURL);\n          window.open(environmentURL + \"/\" + environ.environ_id, \"_self\");\n        },\n      }),\n    ]),\n  );\n}\n\nfunction EconType(props) {\n  const { econ_types } = props;\n\n  return h.if(econ_types && econ_types.length > 0)(\"div\", [\n    econ_types?.map((econClass, i) => {\n      return h(AttrChip, {\n        key: i,\n        name: econClass.name,\n        color: econClass.color,\n      });\n    }),\n  ]);\n}\n\nfunction Economy(props) {\n  const { source } = props;\n  const { macrostrat } = source;\n  const { econs = null, econ_types = null } = macrostrat;\n  if (!econs) return h(\"div\");\n\n  return h.if(econs && econs.length > 0)(\n    ExpandableDetailsPanel,\n    {\n      title: \"Economy \",\n      value: h(EconType, { econ_types }),\n    },\n    h(ExpansionBody, { title: \"Matched economic attributes\" }, [\n      econs?.map((econ, i) => {\n        return h(AttrChip, {\n          key: i,\n          name: econ.econ,\n          color: econ.color,\n        });\n      }),\n    ]),\n  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package/dist/location-details/macrostrat-linked.d.ts

@@ -0,0 +1 @@
+export declare function MacrostratLinkedData(props: any): import('react').FunctionComponentElement<any>;