@macrostrat/column-views 3.12.2 → 3.14.0

package/dist/unit-details/panel.js.map

@@ -1 +1 @@
-{"version":3,"file":"panel.js","sources":["../../src/unit-details/panel.ts"],"sourcesContent":["import { JSONView } from \"@macrostrat/ui-components\";\nimport { Button, ButtonGroup } from \"@blueprintjs/core\";\nimport { ReactNode, useMemo, useState } from \"react\";\nimport {\n  DataField,\n  EnvironmentsList,\n  ItemList,\n  LithologyList,\n  LithologyTagFeature,\n  MacrostratInteractionManager,\n  MacrostratInteractionProvider,\n  MacrostratItemIdentifier,\n  Parenthetical,\n  useInteractionManager,\n  Value,\n} from \"@macrostrat/data-components\";\nimport { useColumnUnitsMap } from \"../data-provider\";\nimport {\n  useMacrostratColumnInfo,\n  useMacrostratData,\n  useMacrostratDefs,\n} from \"@macrostrat/data-provider\";\nimport type {\n  Environment,\n  EnvironmentIdentifier,\n  Interval,\n  Lithology,\n  UnitLong,\n  UnitLongFull,\n} from \"@macrostrat/api-types\";\nimport { defaultNameFunction } from \"../units/names\";\nimport classNames from \"classnames\";\nimport { AgeField, Duration, IntervalProportions } from \"./age-range\";\nimport { formatRange, formatSignificance } from \"./utils.ts\";\nimport h from \"./panel.module.sass\";\nimport { StratNameField } from \"./strat-names.ts\";\nimport {\n  Identifier,\n  UnitIdentifier,\n  UnitInfo,\n} from \"@macrostrat/data-components\";\nimport { LithologyIdentifier } from \"@macrostrat/api-types/src/lithologies\";\n\nexport interface UnitDetailsPanelProps {\n  unit: any;\n  onClose?: any;\n  className?: string;\n  actions?: ReactNode;\n  hiddenActions?: ReactNode;\n  features?: Set<UnitDetailsFeature>;\n  lithologyFeatures?: Set<LithologyTagFeature>;\n  onSelectUnit?: (unitID: number) => void;\n  onClickItem?: MacrostratItemClickHandler;\n  interactionManager?: MacrostratInteractionManager;\n  showJSON?: boolean;\n}\n\nexport function UnitDetailsPanel({\n  unit,\n  onClose,\n  className,\n  features = new Set<UnitDetailsFeature>([\n    UnitDetailsFeature.AdjacentUnits,\n    UnitDetailsFeature.OutcropType,\n    UnitDetailsFeature.JSONToggle,\n    UnitDetailsFeature.DepthRange,\n  ]),\n  lithologyFeatures,\n  actions,\n  hiddenActions = null,\n  onSelectUnit,\n  onClickItem,\n  showJSON,\n}: UnitDetailsPanelProps) {\n  const [_showJSON, setShowJSON] = useState(false);\n\n  let content: ReactNode = null;\n  if (showJSON ?? _showJSON) {\n    content = h(JSONView, { data: unit, showRoot: false });\n  } else {\n    content = h(UnitDetailsContent, {\n      unit,\n      features,\n      lithologyFeatures,\n      onClickItem,\n    });\n  }\n\n  let title = defaultNameFunction(unit);\n\n  if (features.has(UnitDetailsFeature.JSONToggle)) {\n    hiddenActions = h([\n      h(Button, {\n        icon: \"code\",\n        small: true,\n        minimal: true,\n        key: \"json-view-toggle\",\n        className: classNames(\"json-view-toggle\", { enabled: setShowJSON }),\n        onClick(evt) {\n          setShowJSON(!_showJSON);\n          evt.stopPropagation();\n        },\n      }),\n      hiddenActions,\n    ]);\n  }\n\n  const main = h(\"div.unit-details-panel\", { className }, [\n    h(LegendPanelHeader, {\n      onClose,\n      title,\n      id: unit.unit_id,\n      actions,\n      hiddenActions,\n    }),\n    h(\"div.unit-details-content-holder\", content),\n  ]);\n\n  /** Handle unit selection clicks */\n  const clickHandlerForItem = useMemo(() => {\n    if (onSelectUnit == null && onClickItem == null) return null;\n    return (item: MacrostratItemIdentifier) => {\n      if (\"unit_id\" in item && !(\"col_id\" in item)) {\n        // We are selecting a unit within the column\n        return (event: MouseEvent) => {\n          if (onSelectUnit != null) {\n            onSelectUnit(item.unit_id);\n          } else if (onClickItem != null) {\n            console.warn(\n              \"Unit selection: onClickItem is defined but onSelectUnit is not; ignoring click\",\n            );\n          }\n          // Don't allow event to propagate further (e.g., to open a link)\n          event.preventDefault();\n        };\n      }\n      return undefined;\n    };\n  }, [onSelectUnit, onClickItem]);\n\n  if (clickHandlerForItem != null) {\n    // We wrap this in a MacrostratInteractionManager to handle unit selection\n    return h(\n      MacrostratInteractionProvider,\n      {\n        clickHandlerForItem,\n        inherit: true,\n      },\n      main,\n    );\n  }\n\n  return main;\n}\n\nexport function LegendPanelHeader({\n  title,\n  id,\n  onClose,\n  actions = null,\n  hiddenActions,\n}: {\n  title?: string | null;\n  id?: number | null;\n  onClose?: () => void;\n  actions?: ReactNode | null;\n  hiddenActions?: ReactNode | null;\n}) {\n  return h(\"header.legend-panel-header\", [\n    h(\"div.title-container\", [\n      h.if(title != null)(\"h3\", title),\n      h.if(hiddenActions != null)(\n        \"span.hidden-actions-container\",\n        h(\"div.hidden-actions\", hiddenActions),\n      ),\n    ]),\n    h(\"div.spacer\"),\n    h.if(id != null)(\"code.unit-id\", id),\n    h.if(actions != null)(ButtonGroup, { minimal: true }, actions),\n    h.if(onClose != null)(Button, {\n      icon: \"cross\",\n      minimal: true,\n      small: true,\n      onClick() {\n        onClose?.();\n      },\n    }),\n  ]);\n}\n\nexport enum UnitDetailsFeature {\n  AdjacentUnits = \"adjacent-units\",\n  Color = \"color\",\n  OutcropType = \"outcrop-type\",\n  JSONToggle = \"json-toggle\",\n  DepthRange = \"depth-range\",\n  ColumnName = \"column-name\",\n}\n\nexport type MacrostratItemClickHandler = (\n  event: MouseEvent,\n  item:\n    Lithology | Environment | UnitLong | Interval | { strat_name_id: number },\n) => void;\n\nfunction UnitDetailsContent({\n  unit,\n  lithologyFeatures = new Set([\n    LithologyTagFeature.Proportion,\n    LithologyTagFeature.Attributes,\n  ]),\n  features = new Set<UnitDetailsFeature>([\n    UnitDetailsFeature.AdjacentUnits,\n    UnitDetailsFeature.OutcropType,\n  ]),\n  onClickItem,\n  getItemHref,\n}: {\n  unit: UnitLong;\n  lithologyFeatures?: Set<LithologyTagFeature>;\n  features?: Set<UnitDetailsFeature>;\n  onClickItem?: MacrostratItemClickHandler;\n  getItemHref?: (item: Lithology | Environment | UnitLong) => string | null;\n}) {\n  const lithMap = useMacrostratDefs(\"lithologies\");\n  const envMap = useMacrostratDefs(\"environments\");\n\n  const environments = enhanceEnvironments(unit.environ, envMap);\n  const lithologies = enhanceLithologies(unit.lith ?? [], lithMap);\n\n  let outcropField: ReactNode = null;\n  if (features.has(UnitDetailsFeature.OutcropType)) {\n    // Determine outcrop type\n    let outcrop = unit.outcrop;\n    if (outcrop == \"both\") {\n      outcrop = \"surface and subsurface\";\n    }\n    outcropField = h(DataField, {\n      label: \"Outcrop\",\n      value: outcrop,\n    });\n  }\n\n  let thicknessOrHeightRange: ReactNode = null;\n  const [thickness, thicknessUnit] = getThickness(unit);\n  // Proxy for actual heights in t_pos and b_pos\n  if (\n    features.has(UnitDetailsFeature.DepthRange) &&\n    unit.t_pos != null &&\n    unit.b_pos != null &&\n    unit.min_thick == unit.max_thick && // We have an actual fixed height\n    unit.min_thick != 0 // Not a zero thickness\n  ) {\n    const label = unit.t_pos < unit.b_pos ? \"Depth\" : \"Height\";\n    const u1 = \"m\";\n\n    thicknessOrHeightRange = h(DataField, {\n      unit: u1,\n      label,\n      value: formatRange(unit.b_pos, unit.t_pos),\n      children: h(\n        Parenthetical,\n        h(Value, { value: thickness, unit: thicknessUnit }),\n      ),\n    });\n  }\n  thicknessOrHeightRange ??= h(DataField, {\n    label: \"Thickness\",\n    value: thickness,\n    unit: thicknessUnit,\n  });\n\n  /** We are trying to move away from passing the \"color\" parameter in the API */\n  let colorSwatch: ReactNode = null;\n  if (\"color\" in unit && features.has(UnitDetailsFeature.Color)) {\n    const unit1 = unit as UnitLongFull;\n    colorSwatch = h(\"div.color-swatch\", {\n      style: { backgroundColor: unit1.color },\n    });\n  }\n\n  return h(\"div.unit-details-content\", [\n    h.if(features.has(UnitDetailsFeature.ColumnName))(ColumnNameField, {\n      col_id: unit.col_id,\n    }),\n    thicknessOrHeightRange,\n    h.if(lithologies != null)(LithologyList, {\n      label: \"Lithology\",\n      lithologies: lithologies ?? [],\n      features: lithologyFeatures,\n    }),\n    h(AgeField, { unit }, [\n      h(Parenthetical, h(Duration, { value: unit.b_age - unit.t_age })),\n      h(IntervalProportions, {\n        unit,\n        onClickItem,\n      }),\n    ]),\n    h.if(environments != null)(EnvironmentsList, {\n      environments,\n    }),\n    h.if(unit.strat_name_id != null)(StratNameField, {\n      strat_name_id: unit.strat_name_id,\n    }),\n    outcropField,\n    h.if(features.has(UnitDetailsFeature.AdjacentUnits))([\n      h.if(unit.units_above != null)(\n        DataField,\n        { label: \"Above\" },\n        h(UnitIDList, {\n          units: unit.units_above,\n          showNames: true,\n        }),\n      ),\n      h.if(unit.units_below != null)(\n        DataField,\n        { label: \"Below\" },\n        h(UnitIDList, {\n          units: unit.units_below,\n          showNames: true,\n        }),\n      ),\n    ]),\n    colorSwatch,\n    h(ReferencesField, { refs: unit.refs, inline: true 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unit.max_thick ?? unit.min_thick ?? 0;\n  let _unit = \"m\";\n\n  if (minThickness == 0 && maxThickness == 0) {\n    return [\"Unknown\", null];\n  }\n\n  if (minThickness < 0.8 && maxThickness < 1.2) {\n    // Convert to cm\n    minThickness = minThickness * 100;\n    maxThickness = maxThickness * 100;\n    _unit = \"cm\";\n  } else if (minThickness > 800 && maxThickness > 1200) {\n    // Convert to km\n    minThickness = minThickness / 1000;\n    maxThickness = maxThickness / 1000;\n    _unit = \"km\";\n  }\n\n  if (minThickness == maxThickness) {\n    return [formatSignificance(minThickness), _unit];\n  }\n\n  return [formatRange(minThickness, maxThickness), _unit];\n}\n\nexport function ThicknessField({ unit, label = \"Thickness\" }) {\n  const [value, thicknessUnit] = getThickness(unit);\n  return h(DataField, {\n    label,\n    value,\n    unit: thicknessUnit,\n  });\n}\n\nfunction BibInfo({ refs }) {\n  const refData = useMacrostratData(\"refs\", refs);\n\n  if (refData == null || refData.length === 0) {\n    return null;\n  }\n\n  if (refData.length == 1) {\n    return h(Citation, {\n      data: refData[0],\n      tag: \"span\",\n      key: refData[0].ref_id,\n    });\n  }\n\n  return h(\n    \"ul.refs\",\n    refData.map((data, i) =>\n      h(Citation, { data, tag: \"li\", key: data.ref_id }),\n    ),\n  );\n}\n\nfunction Citation({ data, tag = \"p\" }) {\n  return h(tag, { className: \"citation\" }, [\n    h(\"span.authors\", data.author),\n    \", \",\n    h(\"span.year\", data.pub_year),\n    \", \",\n    h(\"span.title\", data.ref),\n  ]);\n}\n\nfunction enhanceEnvironments(\n  environments?: EnvironmentIdentifier[] | null,\n  envMap?: Map<number, Environment> | null,\n) {\n  return environments?.map((env) => {\n    return {\n      ...(envMap?.get(env.environ_id) ?? {}),\n      ...env,\n    };\n  });\n}\n\nfunction enhanceLithologies(\n  lithologies?: LithologyIdentifier[] | null,\n  lithMap?: Map<number, any> | null,\n) {\n  return lithologies?.map((lith) => {\n    return {\n      ...(lithMap?.get(lith.lith_id) ?? {}), // get lithology details\n      ...lith, // override with the unit's specific lithology data\n    };\n  });\n}\n\nfunction UnitIDList({ units, showNames = false }) {\n  const unitsMap = useColumnUnitsMap();\n\n  const interactionManager = useInteractionManager();\n\n  const extUnits: UnitInfo[] = useMemo(() => {\n    const u1 = units.filter((d) => d != 0);\n    if (showNames) {\n      return u1.map((unitID) => {\n        const unitData = unitsMap?.get(unitID);\n        let name: string | null = null;\n        if (unitData != null) {\n          name = defaultNameFunction(unitData);\n        }\n        return {\n          unitID,\n          colID: unitData?.col_id,\n          name,\n        };\n      });\n    } else {\n      return u1.map((unitID) => ({ unitID }));\n    }\n  }, [units, unitsMap]);\n\n  if (extUnits.length === 0) {\n    return h(\"span.no-units\", \"None\");\n  }\n\n  return h(\n    ItemList,\n    { className: \"units-list\" },\n    extUnits.map((info) => {\n      return h(\n        \"span.item\",\n        h(UnitIdentifier, {\n          ...info,\n          ...interactionManager?.interactionPropsForItem({\n            unit_id: info.unitID,\n          }),\n        }),\n      );\n    }),\n  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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@macrostrat/column-views",
-  "version": "3.12.2",
+  "version": "3.14.0",
   "description": "Data views for Macrostrat stratigraphic columns",
   "repository": {
     "type": "git",
@@ -49,7 +49,7 @@
     "@macrostrat/api-types": "^1.4.0",
     "@macrostrat/color-utils": "^1.2.2",
     "@macrostrat/column-components": "^2.2.0",
-    "@macrostrat/data-components": "^1.7.0",
+    "@macrostrat/data-components": "^1.8.0",
     "@macrostrat/data-provider": "^1.4.1",
     "@macrostrat/hyper": "^3.1.1",
     "@macrostrat/map-views": "^1.1.1",

package/src/age-model/surfaces.ts

@@ -3,7 +3,9 @@
  * `ColumnSurfaces` is dropped into a `Column` as a child. It draws one line
  * per surface across the units (`ColumnSurfaceLines`) and a notes column of
  * labels beside them (`ColumnSurfaceLabels`), styled by `boundary_status` and
- * `boundary_type`, with hover and selection.
+ * `boundary_type`, with hover and selection. The labels sit where the unit
+ * labels would, so pass `showLabelColumn: false` to the `Column` while they
+ * are shown.
  */
 import hyper from "@macrostrat/hyper";
 import classNames from "classnames";
@@ -24,11 +26,7 @@ import {
   TagSize,
 } from "@macrostrat/data-components";
 import { useMacrostratDefs } from "@macrostrat/data-provider";
-import {
-  useClaimLabelColumn,
-  useCompositeScale,
-  useMacrostratColumnData,
-} from "../data-provider";
+import { useCompositeScale, useMacrostratColumnData } from "../data-provider";
 import { ColumnNotes } from "../notes";
 import { AgeLabel } from "../unit-details/age-range";
 import columnStyles from "../column.module.sass";
@@ -247,8 +245,8 @@ interface SurfaceNote extends NoteData {
 }
 
 /** A notes column of surface labels, laid out beside the units with the
- * collision avoidance of `NotesColumn`. It takes the label column over from
- * the unit labels while mounted: labels are one or the other. */
+ * collision avoidance of `NotesColumn`. It draws over the unit labels, so the
+ * `Column` should hide its label column (`showLabelColumn: false`). */
 export function ColumnSurfaceLabels(props: ColumnSurfaceLabelsProps) {
   const {
     surfaces,
@@ -263,7 +261,6 @@ export function ColumnSurfaceLabels(props: ColumnSurfaceLabelsProps) {
   const { axisType } = useMacrostratColumnData();
   const scale = useCompositeScale();
   const intervalMap = useSurfaceIntervalDefs(surfaces);
-  useClaimLabelColumn();
 
   const labeled = useMemo(() => {
     const byStatus = filterByStatus(surfaces, labelStatuses);

package/src/column.ts

@@ -30,7 +30,6 @@ import {
 import {
   MacrostratColumnDataProvider,
   useCompositeScale,
-  useLabelColumnClaimed,
   useMacrostratColumnData,
 } from "./data-provider";
 import {
@@ -65,7 +64,13 @@ interface BaseColumnProps extends Omit<
   keyboardNavigation?: boolean;
   showLabels?: boolean;
   maxInternalColumns?: number;
+  /** Draw the age (or height) axis beside the column (default). Off for a
+   * column whose coordinates aren't a measure — one laid out by surface order
+   * alone, say. */
+  showAgeAxis?: boolean;
   // Timescale properties
+  /** Draw the timescale. Defaults to on for an age column; an explicit value
+   * wins over `timescaleLevels` / `timescales`, which otherwise turn it on. */
   showTimescale?: boolean;
   timescaleLevels?: number | [number, number];
   /** Regional or project timescales drawn as extra columns beside the
@@ -169,22 +174,6 @@ export function Column(props: ColumnProps) {
     _axisType = ColumnAxisType.AGE;
   }
 
-  let _sectionOptions = sectionOptions;
-  if (_sectionOptions == undefined) {
-    // Build our own section options function based on targetUnitHeight
-    _sectionOptions = (ctx) => {
-      /** Scale targetUnitHeight by the number of units, so that a section with just a few units
-       * is drawn taller than a section with many units.
-       */
-      const n = ctx.units.length;
-      const expansionFactor = 8 / Math.min(Math.max(n, 1), 8);
-
-      return {
-        targetUnitHeight: targetUnitHeight * expansionFactor,
-      };
-    };
-  }
-
   const { sections, units, totalHeight } = usePreparedColumnUnits(rawUnits, {
     axisType: _axisType,
     t_age,
@@ -193,7 +182,7 @@ export function Column(props: ColumnProps) {
     b_pos,
     mergeSections,
     targetUnitHeight,
-    sectionOptions: _sectionOptions,
+    sectionOptions,
     unconformityHeight,
     pixelScale,
     pixelsPerMyr,
@@ -276,12 +265,10 @@ function ColumnInner(props: ColumnInnerProps) {
     onClickTimescaleInterval,
     timescaleIntervalStyle,
     ageAxisComponent = CompositeAgeAxis,
+    showAgeAxis = true,
   } = props;
 
   const { axisType } = useMacrostratColumnData();
-  // A child layer drawing its own labels (the surfaces view) takes the label
-  // column over from the unit labels
-  const labelColumnClaimed = useLabelColumnClaimed();
 
   const columnRef = useColumnRef();
 
@@ -300,15 +287,14 @@ function ColumnInner(props: ColumnInnerProps) {
     columnWidth = width;
   }
   let showLabelColumn = _showLabelColumn;
-  if (columnWidth > width - 10 || labelColumnClaimed) {
+  if (columnWidth > width - 10) {
     showLabelColumn = false;
   }
 
-  let _showTimescale = showTimescale ?? true;
-  if (timescaleLevels != null || timescales != null) {
-    _showTimescale = true;
-  }
-  _showTimescale = axisType == ColumnAxisType.AGE && _showTimescale;
+  // On unless turned off outright: passing levels or timescales no longer
+  // overrides an explicit `false`
+  const _showTimescale =
+    axisType == ColumnAxisType.AGE && (showTimescale ?? true);
 
   return h(
     ColumnContainer,
@@ -318,7 +304,7 @@ function ColumnInner(props: ColumnInnerProps) {
       className,
     },
     h("div.column", { ref: columnRef }, [
-      h(ageAxisComponent),
+      h.if(showAgeAxis)(ageAxisComponent),
       h.if(_showTimescale)(CompositeTimescale, {
         levels: timescaleLevels,
         additionalTimescales,

package/src/data-provider/store.ts

@@ -2,10 +2,8 @@ import {
   createContext,
   ReactNode,
   RefObject,
-  useCallback,
   useContext,
   useMemo,
-  useState,
 } from "react";
 import h from "@macrostrat/hyper";
 import {
@@ -190,58 +188,11 @@ export function MacrostratColumnDataProvider<T extends BaseUnit>({
     },
     [
       h(ColumnRefManager, { ref }),
-      h(
-        MacrostratColumnDataContext.Provider,
-        { value },
-        h(ColumnLayoutOverridesProvider, null, children),
-      ),
+      h(MacrostratColumnDataContext.Provider, { value }, children),
     ],
   );
 }
 
-/* Layout overrides requested by a column's children. A layer that draws its
- * own labels beside the units (the surfaces view) claims the label column, so
- * the unit labels give way: it is one set of labels or the other. */
-
-interface ColumnLayoutOverrides {
-  /** How many children currently claim the label column */
-  labelColumnClaims: number;
-  claimLabelColumn(): () => void;
-}
-
-const ColumnLayoutOverridesContext = createContext<ColumnLayoutOverrides>({
-  labelColumnClaims: 0,
-  claimLabelColumn: () => () => {},
-});
-
-function ColumnLayoutOverridesProvider({ children }: { children: ReactNode }) {
-  const [labelColumnClaims, setClaims] = useState(0);
-  const claimLabelColumn = useCallback(() => {
-    setClaims((n) => n + 1);
-    return () => setClaims((n) => Math.max(n - 1, 0));
-  }, []);
-  const value = useMemo(
-    () => ({ labelColumnClaims, claimLabelColumn }),
-    [labelColumnClaims, claimLabelColumn],
-  );
-  return h(ColumnLayoutOverridesContext.Provider, { value }, children);
-}
-
-/** Claim the column's label column for this component while it is mounted:
- * the unit labels are hidden in favor of whatever the caller draws there. */
-export function useClaimLabelColumn(active: boolean = true) {
-  const { claimLabelColumn } = useContext(ColumnLayoutOverridesContext);
-  useEffect(() => {
-    if (!active) return;
-    return claimLabelColumn();
-  }, [active, claimLabelColumn]);
-}
-
-/** Whether a child of the column has claimed the label column */
-export function useLabelColumnClaimed(): boolean {
-  return useContext(ColumnLayoutOverridesContext).labelColumnClaims > 0;
-}
-
 function ColumnRefManager({ ref }: { ref?: RefObject<ColumnRef> }) {
   const selectedUnitElement = scope.useAtomValue(selectedUnitElementAtom);
   useEffect(() => {

package/src/unit-details/panel.ts

@@ -406,7 +406,8 @@ export function ThicknessField({ unit, label = "Thickness" }) {
 }
 
 function BibInfo({ refs }) {
-  const refData = useMacrostratData("refs", refs);
+  // A reference the server doesn't know comes back as a hole, not a record
+  const refData = useMacrostratData("refs", refs)?.filter((d) => d != null);
 
   if (refData == null || refData.length === 0) {
     return null;