@macrostrat/column-views 3.0.3 → 3.2.0

package/dist/units/index.js

@@ -4,11 +4,12 @@ import { UnitNamesColumn } from "./names.js";
 import { UnitBoxes } from "./boxes.js";
 import { useInDarkMode } from "@macrostrat/ui-components";
 import { getMixedUnitColor } from "./colors.js";
+import { flattenLithologies, getMixedColorForData } from "./colors.js";
 import { TrackedLabeledUnit } from "./composite.js";
 import { AnnotatedUnitsColumn, ColumnNotesProvider, CompositeUnitComponent, CompositeUnitsColumn, LabelTrackerProvider, SectionLabelsColumn } from "./composite.js";
+import { useLithologies, useEnvironments } from "@macrostrat/data-provider";
 import { useMemo } from "react";
 import { resolveID } from "./resolvers.js";
-import { useLithologies, useEnvironments } from "../data-provider/base.js";
 function UnitsColumn({ width = 100 }) {
   return h(LithologyColumn, { width }, h(UnitBoxes));
 }
@@ -111,6 +112,8 @@ export {
   TrackedLabeledUnit,
   UnitComponent,
   UnitsColumn,
+  flattenLithologies,
+  getMixedColorForData,
   getMixedUnitColor,
   useUnitColor,
   useUnitColorByEnvironment

package/dist/units/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sources":["../../src/units/index.ts"],"sourcesContent":["import h from \"@macrostrat/hyper\";\nimport {\n  LithologyColumn,\n  useGeologicPattern,\n} from \"@macrostrat/column-components\";\nimport { UnitNamesColumn } from \"./names\";\nimport { ICompositeUnitProps } from \"./composite\";\nimport { UnitBoxes, UnitProps } from \"./boxes\";\nimport { useColumnLayout } from \"@macrostrat/column-components\";\nimport { useInDarkMode } from \"@macrostrat/ui-components\";\nimport { getMixedUnitColor } from \"./colors\";\nimport { TrackedLabeledUnit } from \"./composite\";\nimport { useEnvironments, useLithologies } from \"../data-provider\";\nimport { useMemo } from \"react\";\nimport { resolveID } from \"./resolvers\";\nimport { Lithology } from \"@macrostrat/api-types\";\n\nexport * from \"./composite\";\nexport * from \"./types\";\nexport * from \"./colors\";\n\nexport function UnitsColumn({ width = 100 }) {\n  /*\n  A column showing units with USGS color fill\n  */\n  return h(LithologyColumn, { width }, h(UnitBoxes));\n}\n\nexport function SimpleUnitsColumn(props: ICompositeUnitProps) {\n  /*\n  A column with units and names either\n  overlapping or offset to the right\n  */\n  const { columnWidth, width, gutterWidth = 0, labelOffset = 30 } = props;\n\n  return h([\n    h(UnitsColumn, {\n      width: columnWidth,\n    }),\n    h(UnitNamesColumn, {\n      transform: `translate(${columnWidth + gutterWidth})`,\n      paddingLeft: labelOffset,\n      width: width - columnWidth - gutterWidth,\n    }),\n  ]);\n}\n\nexport function BasicUnitComponent({ division, ...rest }) {\n  /** A unit that allows directly setting colors and patterns. */\n\n  return h(UnitComponent, {\n    division,\n    ...rest,\n    backgroundColor: division.color,\n    patternID: division.patternID,\n  });\n}\n\nexport function UnitComponent({ division, nColumns = 2, ...rest }) {\n  const width = rest.width ?? useColumnLayout()?.width;\n\n  const nOverlappingUnits = division.overlappingUnits?.length ?? 0;\n  const _nColumns = nOverlappingUnits == 0 ? 1 : nColumns;\n  const columnIx = (division.column ?? 0) % _nColumns;\n  const reducedWidth = width / _nColumns;\n  const x = (columnIx * width) / _nColumns;\n\n  return h(TrackedLabeledUnit, {\n    division,\n    ...rest,\n    width: reducedWidth,\n    x,\n  });\n}\n\ninterface UnitColorOptions {\n  asBackground?: boolean;\n}\n\nexport function useUnitColor(unit, opts: UnitColorOptions = {}): string | null {\n  /** Get the color for a unit based on its lithology */\n  const lithMap = useLithologies();\n  const inDarkMode = useInDarkMode();\n  const { asBackground = true } = opts;\n\n  return useMemo(() => {\n    if (unit == null || lithMap == null) return null;\n    return getMixedUnitColor(unit, lithMap, inDarkMode, asBackground);\n  }, [unit?.unit_id, lithMap, inDarkMode, asBackground]);\n}\n\nexport function ColoredUnitComponent(props) {\n  /** A unit component that is colored using a mixture of lithologies.\n   * This is a separate component because it depends on more providers/contexts to determine coloring. */\n  const backgroundColor = useUnitColor(props.division);\n\n  const patternID = useMemo(() => {\n    return resolveID(props.division); // ?? getPatternID(props.division.lith, lithMap);\n  }, [props.division?.unit_id]);\n\n  const fill = useGeologicPattern(patternID);\n\n  return h(UnitComponent, {\n    fill,\n    backgroundColor,\n    ...props,\n  });\n}\n\nexport function useUnitColorByEnvironment(\n  unit,\n  opts: UnitColorOptions = {},\n): string | null {\n  /** Get the color for a unit based on its lithology */\n  const environmentMap = useEnvironments();\n  const lithMap = useLithologies();\n  const inDarkMode = useInDarkMode();\n  const { asBackground = true } = opts;\n\n  return useMemo(() => {\n    if (unit == null || environmentMap == null) return null;\n    let c = getMixedUnitColor(unit, environmentMap, inDarkMode, asBackground, {\n      key: \"environ\",\n      id_key: \"environ_id\",\n    });\n    if (c != null) {\n      return c;\n    }\n    // Fallback to lithology color if no environment color is found\n    return getMixedUnitColor(unit, lithMap, inDarkMode, asBackground);\n  }, [unit?.unit_id, environmentMap, lithMap, inDarkMode, asBackground]);\n}\n\nexport function EnvironmentColoredUnitComponent(props) {\n  /** A unit component that is colored using a mixture of lithologies.\n   * This is a separate component because it depends on more providers/contexts to determine coloring. */\n  const backgroundColor = useUnitColorByEnvironment(props.division);\n\n  const patternID = useMemo(() => {\n    return resolveID(props.division); // ?? getPatternID(props.division.lith, lithMap);\n  }, [props.division?.unit_id]);\n\n  const fill = useGeologicPattern(patternID);\n\n  return h(UnitComponent, {\n    fill,\n    backgroundColor,\n    ...props,\n  });\n}\n\nfunction getPatternID(\n  liths: Array<Lithology>,\n  lithMap: Map<number, Lithology>,\n): string | null {\n  if (lithMap == null || liths == null || liths.length == 0) {\n    return null;\n  }\n  const patternIDs = new Set<string>();\n  for (const lith of liths) {\n    const lithData = lithMap.get(lith.lith_id);\n    if (lithData) {\n      patternIDs.add(`${lithData.fill}`);\n    }\n  }\n  let id = patternIDs.values()[0];\n  if (id == \"0\") return null;\n  return id;\n}\n"],"names":[],"mappings":";;;;;;;;;;;AAqBO,SAAS,YAAY,EAAE,QAAQ,OAAO;AAI3C,SAAO,EAAE,iBAAiB,EAAE,SAAS,EAAE,SAAS,CAAC;AACnD;AAEO,SAAS,kBAAkB,OAA4B;AAK5D,QAAM,EAAE,aAAa,OAAO,cAAc,GAAG,cAAc,OAAO;AAElE,SAAO,EAAE;AAAA,IACP,EAAE,aAAa;AAAA,MACb,OAAO;AAAA,IAAA,CACR;AAAA,IACD,EAAE,iBAAiB;AAAA,MACjB,WAAW,aAAa,cAAc,WAAW;AAAA,MACjD,aAAa;AAAA,MACb,OAAO,QAAQ,cAAc;AAAA,IAAA,CAC9B;AAAA,EAAA,CACF;AACH;AAEO,SAAS,mBAAmB,EAAE,UAAU,GAAG,QAAQ;AAGxD,SAAO,EAAE,eAAe;AAAA,IACtB;AAAA,IACA,GAAG;AAAA,IACH,iBAAiB,SAAS;AAAA,IAC1B,WAAW,SAAS;AAAA,EAAA,CACrB;AACH;AAEO,SAAS,cAAc,EAAE,UAAU,WAAW,GAAG,GAAG,QAAQ;AACjE,QAAM,QAAQ,KAAK,SAAS,gBAAA,GAAmB;AAE/C,QAAM,oBAAoB,SAAS,kBAAkB,UAAU;AAC/D,QAAM,YAAY,qBAAqB,IAAI,IAAI;AAC/C,QAAM,YAAY,SAAS,UAAU,KAAK;AAC1C,QAAM,eAAe,QAAQ;AAC7B,QAAM,IAAK,WAAW,QAAS;AAE/B,SAAO,EAAE,oBAAoB;AAAA,IAC3B;AAAA,IACA,GAAG;AAAA,IACH,OAAO;AAAA,IACP;AAAA,EAAA,CACD;AACH;AAMO,SAAS,aAAa,MAAM,OAAyB,IAAmB;AAE7E,QAAM,UAAU,eAAA;AAChB,QAAM,aAAa,cAAA;AACnB,QAAM,EAAE,eAAe,KAAA,IAAS;AAEhC,SAAO,QAAQ,MAAM;AACnB,QAAI,QAAQ,QAAQ,WAAW,KAAM,QAAO;AAC5C,WAAO,kBAAkB,MAAM,SAAS,YAAY,YAAY;AAAA,EAClE,GAAG,CAAC,MAAM,SAAS,SAAS,YAAY,YAAY,CAAC;AACvD;AAEO,SAAS,qBAAqB,OAAO;AAG1C,QAAM,kBAAkB,aAAa,MAAM,QAAQ;AAEnD,QAAM,YAAY,QAAQ,MAAM;AAC9B,WAAO,UAAU,MAAM,QAAQ;AAAA,EACjC,GAAG,CAAC,MAAM,UAAU,OAAO,CAAC;AAE5B,QAAM,OAAO,mBAAmB,SAAS;AAEzC,SAAO,EAAE,eAAe;AAAA,IACtB;AAAA,IACA;AAAA,IACA,GAAG;AAAA,EAAA,CACJ;AACH;AAEO,SAAS,0BACd,MACA,OAAyB,IACV;AAEf,QAAM,iBAAiB,gBAAA;AACvB,QAAM,UAAU,eAAA;AAChB,QAAM,aAAa,cAAA;AACnB,QAAM,EAAE,eAAe,KAAA,IAAS;AAEhC,SAAO,QAAQ,MAAM;AACnB,QAAI,QAAQ,QAAQ,kBAAkB,KAAM,QAAO;AACnD,QAAI,IAAI,kBAAkB,MAAM,gBAAgB,YAAY,cAAc;AAAA,MACxE,KAAK;AAAA,MACL,QAAQ;AAAA,IAAA,CACT;AACD,QAAI,KAAK,MAAM;AACb,aAAO;AAAA,IACT;AAEA,WAAO,kBAAkB,MAAM,SAAS,YAAY,YAAY;AAAA,EAClE,GAAG,CAAC,MAAM,SAAS,gBAAgB,SAAS,YAAY,YAAY,CAAC;AACvE;AAEO,SAAS,gCAAgC,OAAO;AAGrD,QAAM,kBAAkB,0BAA0B,MAAM,QAAQ;AAEhE,QAAM,YAAY,QAAQ,MAAM;AAC9B,WAAO,UAAU,MAAM,QAAQ;AAAA,EACjC,GAAG,CAAC,MAAM,UAAU,OAAO,CAAC;AAE5B,QAAM,OAAO,mBAAmB,SAAS;AAEzC,SAAO,EAAE,eAAe;AAAA,IACtB;AAAA,IACA;AAAA,IACA,GAAG;AAAA,EAAA,CACJ;AACH;"}
+{"version":3,"file":"index.js","sources":["../../src/units/index.ts"],"sourcesContent":["import h from \"@macrostrat/hyper\";\nimport {\n  LithologyColumn,\n  useGeologicPattern,\n} from \"@macrostrat/column-components\";\nimport { UnitNamesColumn } from \"./names\";\nimport { ICompositeUnitProps } from \"./composite\";\nimport { UnitBoxes, UnitProps } from \"./boxes\";\nimport { useColumnLayout } from \"@macrostrat/column-components\";\nimport { useInDarkMode } from \"@macrostrat/ui-components\";\nimport { getMixedUnitColor } from \"./colors\";\nimport { TrackedLabeledUnit } from \"./composite\";\nimport { useEnvironments, useLithologies } from \"@macrostrat/data-provider\";\nimport { useMemo } from \"react\";\nimport { resolveID } from \"./resolvers\";\nimport { Lithology } from \"@macrostrat/api-types\";\n\nexport * from \"./composite\";\nexport * from \"./types\";\nexport * from \"./colors\";\n\nexport function UnitsColumn({ width = 100 }) {\n  /*\n  A column showing units with USGS color fill\n  */\n  return h(LithologyColumn, { width }, h(UnitBoxes));\n}\n\nexport function SimpleUnitsColumn(props: ICompositeUnitProps) {\n  /*\n  A column with units and names either\n  overlapping or offset to the right\n  */\n  const { columnWidth, width, gutterWidth = 0, labelOffset = 30 } = props;\n\n  return h([\n    h(UnitsColumn, {\n      width: columnWidth,\n    }),\n    h(UnitNamesColumn, {\n      transform: `translate(${columnWidth + gutterWidth})`,\n      paddingLeft: labelOffset,\n      width: width - columnWidth - gutterWidth,\n    }),\n  ]);\n}\n\nexport function BasicUnitComponent({ division, ...rest }) {\n  /** A unit that allows directly setting colors and patterns. */\n\n  return h(UnitComponent, {\n    division,\n    ...rest,\n    backgroundColor: division.color,\n    patternID: division.patternID,\n  });\n}\n\nexport function UnitComponent({ division, nColumns = 2, ...rest }) {\n  const width = rest.width ?? useColumnLayout()?.width;\n\n  const nOverlappingUnits = division.overlappingUnits?.length ?? 0;\n  const _nColumns = nOverlappingUnits == 0 ? 1 : nColumns;\n  const columnIx = (division.column ?? 0) % _nColumns;\n  const reducedWidth = width / _nColumns;\n  const x = (columnIx * width) / _nColumns;\n\n  return h(TrackedLabeledUnit, {\n    division,\n    ...rest,\n    width: reducedWidth,\n    x,\n  });\n}\n\ninterface UnitColorOptions {\n  asBackground?: boolean;\n}\n\nexport function useUnitColor(unit, opts: UnitColorOptions = {}): string | null {\n  /** Get the color for a unit based on its lithology */\n  const lithMap = useLithologies();\n  const inDarkMode = useInDarkMode();\n  const { asBackground = true } = opts;\n\n  return useMemo(() => {\n    if (unit == null || lithMap == null) return null;\n    return getMixedUnitColor(unit, lithMap, inDarkMode, asBackground);\n  }, [unit?.unit_id, lithMap, inDarkMode, asBackground]);\n}\n\nexport function ColoredUnitComponent(props) {\n  /** A unit component that is colored using a mixture of lithologies.\n   * This is a separate component because it depends on more providers/contexts to determine coloring. */\n  const backgroundColor = useUnitColor(props.division);\n\n  const patternID = useMemo(() => {\n    return resolveID(props.division); // ?? getPatternID(props.division.lith, lithMap);\n  }, [props.division?.unit_id]);\n\n  const fill = useGeologicPattern(patternID);\n\n  return h(UnitComponent, {\n    fill,\n    backgroundColor,\n    ...props,\n  });\n}\n\nexport function useUnitColorByEnvironment(\n  unit,\n  opts: UnitColorOptions = {},\n): string | null {\n  /** Get the color for a unit based on its lithology */\n  const environmentMap = useEnvironments();\n  const lithMap = useLithologies();\n  const inDarkMode = useInDarkMode();\n  const { asBackground = true } = opts;\n\n  return useMemo(() => {\n    if (unit == null || environmentMap == null) return null;\n    let c = getMixedUnitColor(unit, environmentMap, inDarkMode, asBackground, {\n      key: \"environ\",\n      id_key: \"environ_id\",\n    });\n    if (c != null) {\n      return c;\n    }\n    // Fallback to lithology color if no environment color is found\n    return getMixedUnitColor(unit, lithMap, inDarkMode, asBackground);\n  }, [unit?.unit_id, environmentMap, lithMap, inDarkMode, asBackground]);\n}\n\nexport function EnvironmentColoredUnitComponent(props) {\n  /** A unit component that is colored using a mixture of lithologies.\n   * This is a separate component because it depends on more providers/contexts to determine coloring. */\n  const backgroundColor = useUnitColorByEnvironment(props.division);\n\n  const patternID = useMemo(() => {\n    return resolveID(props.division); // ?? getPatternID(props.division.lith, lithMap);\n  }, [props.division?.unit_id]);\n\n  const fill = useGeologicPattern(patternID);\n\n  return h(UnitComponent, {\n    fill,\n    backgroundColor,\n    ...props,\n  });\n}\n\nfunction getPatternID(\n  liths: Array<Lithology>,\n  lithMap: Map<number, Lithology>,\n): string | null {\n  if (lithMap == null || liths == null || liths.length == 0) {\n    return null;\n  }\n  const patternIDs = new Set<string>();\n  for (const lith of liths) {\n    const lithData = lithMap.get(lith.lith_id);\n    if (lithData) {\n      patternIDs.add(`${lithData.fill}`);\n    }\n  }\n  let id = patternIDs.values()[0];\n  if (id == \"0\") return null;\n  return id;\n}\n"],"names":[],"mappings":";;;;;;;;;;;;AAqBO,SAAS,YAAY,EAAE,QAAQ,OAAO;AAI3C,SAAO,EAAE,iBAAiB,EAAE,SAAS,EAAE,SAAS,CAAC;AACnD;AAEO,SAAS,kBAAkB,OAA4B;AAK5D,QAAM,EAAE,aAAa,OAAO,cAAc,GAAG,cAAc,OAAO;AAElE,SAAO,EAAE;AAAA,IACP,EAAE,aAAa;AAAA,MACb,OAAO;AAAA,IAAA,CACR;AAAA,IACD,EAAE,iBAAiB;AAAA,MACjB,WAAW,aAAa,cAAc,WAAW;AAAA,MACjD,aAAa;AAAA,MACb,OAAO,QAAQ,cAAc;AAAA,IAAA,CAC9B;AAAA,EAAA,CACF;AACH;AAEO,SAAS,mBAAmB,EAAE,UAAU,GAAG,QAAQ;AAGxD,SAAO,EAAE,eAAe;AAAA,IACtB;AAAA,IACA,GAAG;AAAA,IACH,iBAAiB,SAAS;AAAA,IAC1B,WAAW,SAAS;AAAA,EAAA,CACrB;AACH;AAEO,SAAS,cAAc,EAAE,UAAU,WAAW,GAAG,GAAG,QAAQ;AACjE,QAAM,QAAQ,KAAK,SAAS,gBAAA,GAAmB;AAE/C,QAAM,oBAAoB,SAAS,kBAAkB,UAAU;AAC/D,QAAM,YAAY,qBAAqB,IAAI,IAAI;AAC/C,QAAM,YAAY,SAAS,UAAU,KAAK;AAC1C,QAAM,eAAe,QAAQ;AAC7B,QAAM,IAAK,WAAW,QAAS;AAE/B,SAAO,EAAE,oBAAoB;AAAA,IAC3B;AAAA,IACA,GAAG;AAAA,IACH,OAAO;AAAA,IACP;AAAA,EAAA,CACD;AACH;AAMO,SAAS,aAAa,MAAM,OAAyB,IAAmB;AAE7E,QAAM,UAAU,eAAA;AAChB,QAAM,aAAa,cAAA;AACnB,QAAM,EAAE,eAAe,KAAA,IAAS;AAEhC,SAAO,QAAQ,MAAM;AACnB,QAAI,QAAQ,QAAQ,WAAW,KAAM,QAAO;AAC5C,WAAO,kBAAkB,MAAM,SAAS,YAAY,YAAY;AAAA,EAClE,GAAG,CAAC,MAAM,SAAS,SAAS,YAAY,YAAY,CAAC;AACvD;AAEO,SAAS,qBAAqB,OAAO;AAG1C,QAAM,kBAAkB,aAAa,MAAM,QAAQ;AAEnD,QAAM,YAAY,QAAQ,MAAM;AAC9B,WAAO,UAAU,MAAM,QAAQ;AAAA,EACjC,GAAG,CAAC,MAAM,UAAU,OAAO,CAAC;AAE5B,QAAM,OAAO,mBAAmB,SAAS;AAEzC,SAAO,EAAE,eAAe;AAAA,IACtB;AAAA,IACA;AAAA,IACA,GAAG;AAAA,EAAA,CACJ;AACH;AAEO,SAAS,0BACd,MACA,OAAyB,IACV;AAEf,QAAM,iBAAiB,gBAAA;AACvB,QAAM,UAAU,eAAA;AAChB,QAAM,aAAa,cAAA;AACnB,QAAM,EAAE,eAAe,KAAA,IAAS;AAEhC,SAAO,QAAQ,MAAM;AACnB,QAAI,QAAQ,QAAQ,kBAAkB,KAAM,QAAO;AACnD,QAAI,IAAI,kBAAkB,MAAM,gBAAgB,YAAY,cAAc;AAAA,MACxE,KAAK;AAAA,MACL,QAAQ;AAAA,IAAA,CACT;AACD,QAAI,KAAK,MAAM;AACb,aAAO;AAAA,IACT;AAEA,WAAO,kBAAkB,MAAM,SAAS,YAAY,YAAY;AAAA,EAClE,GAAG,CAAC,MAAM,SAAS,gBAAgB,SAAS,YAAY,YAAY,CAAC;AACvE;AAEO,SAAS,gCAAgC,OAAO;AAGrD,QAAM,kBAAkB,0BAA0B,MAAM,QAAQ;AAEhE,QAAM,YAAY,QAAQ,MAAM;AAC9B,WAAO,UAAU,MAAM,QAAQ;AAAA,EACjC,GAAG,CAAC,MAAM,UAAU,OAAO,CAAC;AAE5B,QAAM,OAAO,mBAAmB,SAAS;AAEzC,SAAO,EAAE,eAAe;AAAA,IACtB;AAAA,IACA;AAAA,IACA,GAAG;AAAA,EAAA,CACJ;AACH;"}

package/dist/units/resolvers.cjs

@@ -55,6 +55,16 @@ const symbolIndex = {
   argillite: 624,
   diamictite: 681
 };
+function getBestFGDCPatternForLithologyList(liths) {
+  let lithsSorted = [...liths];
+  lithsSorted.sort((a, b) => b.prop - a.prop);
+  let firstLith = lithsSorted[0];
+  let sym = symbolIndex[firstLith.name];
+  if (sym != null) {
+    return { lith: firstLith, patternID: `${sym}` };
+  }
+  return null;
+}
 const resolveID = (d) => {
   if (d.lith == null || d.lith.length == 0) {
     return null;
@@ -109,6 +119,7 @@ const patternScale = {
 const scalePattern = (id) => {
   return patternScale[`${id}`] ?? 1;
 };
+exports.getBestFGDCPatternForLithologyList = getBestFGDCPatternForLithologyList;
 exports.resolveID = resolveID;
 exports.scalePattern = scalePattern;
 //# sourceMappingURL=resolvers.cjs.map

package/dist/units/resolvers.cjs.map

@@ -1 +1 @@
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+{"version":3,"file":"resolvers.cjs","sources":["../../src/units/resolvers.ts"],"sourcesContent":["import { Lithology, UnitLithology } from \"@macrostrat/api-types\";\nimport { LithologyCore } from \"@macrostrat/api-types/src/lithologies\";\n\nconst symbolIndex = {\n  \"dolomite-limestone\": 641,\n  lime_mudstone: 627,\n  sandstone: 607,\n  \"quartz arenite\": 607,\n  litharenite: 608,\n  sand: 608,\n  siltstone: 616,\n  silt: 616,\n  siliciclastic: 615,\n  mud: 620,\n  \"dolomitic siltstone\": 616,\n  shale: 620,\n  limestone: 627,\n  dolomite: 642,\n  conglomerate: 602,\n  carbonate: 627,\n  \"dolomite-mudstone\": 642,\n  dolostone: 642,\n  mudstone: 620,\n  slate: 703,\n  \"sandy-dolomite\": 645,\n  quartzite: 702,\n  halite: 668,\n  gypsum: 667,\n  evaporite: 667,\n  claystone: 620,\n  anhydrite: 667,\n  gabbro: 720,\n  basalt: 717,\n  diabase: 717,\n  rhyolite: 722,\n  andesite: 723,\n  till: 681,\n  loess: 684,\n  \"calcareous ooze\": 653,\n  \"siliceous ooze\": 653,\n  chalk: 626,\n  gravel: 601,\n  plutonic: 721,\n  granite: 719,\n  clay: 660,\n  syenite: 722,\n  tuff: 711,\n  volcanic: 725,\n  metamorphic: 707,\n  volcaniclastic: 714,\n  migmatite: 709,\n  gneiss: 708,\n  tonalite: 727,\n  granodiorite: 725,\n  monzonite: 723,\n  argillite: 624,\n  diamictite: 681,\n};\n\nexport function getBestFGDCPatternForLithologyList<\n  T extends UnitLithology | Lithology,\n>(liths: T[]): { lith: T; patternID: string } | null {\n  let lithsSorted = [...liths];\n  lithsSorted.sort((a, b) => b.prop - a.prop);\n  let firstLith = lithsSorted[0];\n  let sym = symbolIndex[firstLith.name];\n  if (sym != null) {\n    return { lith: firstLith, patternID: `${sym}` };\n  }\n  return null;\n}\n\nconst resolveID = (d: any) => {\n  if (d.lith == null || d.lith.length == 0) {\n    return null;\n  }\n  let liths = [...d.lith];\n  let environs = d.environ.map((d) => d.name).join(\" \");\n  liths.sort((a, b) => b.prop - a.prop);\n\n  //console.log(d, d.unit_name, liths.map(d => d.name), environs)\n\n  let sym = null;\n\n  // overrides for IODP columns\n  if (d.unit_name == \"clay\") {\n    return \"650\";\n  }\n  if (d.unit_name == \"calcareous clay\") {\n    return \"651\";\n  }\n\n  for (const k of liths) {\n    if (k.name == \"sandstone\") {\n      // Special cases for sandstone\n      if (environs.includes(\"dune\")) {\n        return \"609\";\n      }\n      if (environs.includes(\"marine\")) {\n        return \"608\";\n      }\n      if (environs.includes(\"shore\")) {\n        return \"611\";\n      }\n      if (environs.includes(\"loess\")) {\n        return \"686\";\n      }\n    }\n\n    if (k.name == \"conglomerate\") {\n      // Special cases for sandstone\n      if (environs.includes(\"fluvial\")) {\n        return \"603\";\n      }\n    }\n\n    if (k.name.includes(\"tuff\")) {\n      return \"711\";\n    }\n    sym = symbolIndex[k.name];\n    if (sym != null) {\n      return sym;\n    }\n\n    if (k.type == \"volcanic\") {\n      return \"725\";\n    }\n  }\n  return sym;\n};\n\nconst patternScale = {\n  \"609\": 1.5,\n  \"603\": 1.5,\n};\n\nconst scalePattern = (id) => {\n  return patternScale[`${id}`] ?? 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package/dist/units/resolvers.d.ts

@@ -1,3 +1,8 @@
+import { Lithology, UnitLithology } from '@macrostrat/api-types';
+export declare function getBestFGDCPatternForLithologyList<T extends UnitLithology | Lithology>(liths: T[]): {
+    lith: T;
+    patternID: string;
+} | null;
 declare const resolveID: (d: any) => any;
 declare const scalePattern: (id: any) => any;
 export { resolveID, scalePattern };

package/dist/units/resolvers.js

@@ -53,6 +53,16 @@ const symbolIndex = {
   argillite: 624,
   diamictite: 681
 };
+function getBestFGDCPatternForLithologyList(liths) {
+  let lithsSorted = [...liths];
+  lithsSorted.sort((a, b) => b.prop - a.prop);
+  let firstLith = lithsSorted[0];
+  let sym = symbolIndex[firstLith.name];
+  if (sym != null) {
+    return { lith: firstLith, patternID: `${sym}` };
+  }
+  return null;
+}
 const resolveID = (d) => {
   if (d.lith == null || d.lith.length == 0) {
     return null;
@@ -108,6 +118,7 @@ const scalePattern = (id) => {
   return patternScale[`${id}`] ?? 1;
 };
 export {
+  getBestFGDCPatternForLithologyList,
   resolveID,
   scalePattern
 };

package/dist/units/resolvers.js.map

@@ -1 +1 @@
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+{"version":3,"file":"resolvers.js","sources":["../../src/units/resolvers.ts"],"sourcesContent":["import { Lithology, UnitLithology } from \"@macrostrat/api-types\";\nimport { LithologyCore } from \"@macrostrat/api-types/src/lithologies\";\n\nconst symbolIndex = {\n  \"dolomite-limestone\": 641,\n  lime_mudstone: 627,\n  sandstone: 607,\n  \"quartz arenite\": 607,\n  litharenite: 608,\n  sand: 608,\n  siltstone: 616,\n  silt: 616,\n  siliciclastic: 615,\n  mud: 620,\n  \"dolomitic siltstone\": 616,\n  shale: 620,\n  limestone: 627,\n  dolomite: 642,\n  conglomerate: 602,\n  carbonate: 627,\n  \"dolomite-mudstone\": 642,\n  dolostone: 642,\n  mudstone: 620,\n  slate: 703,\n  \"sandy-dolomite\": 645,\n  quartzite: 702,\n  halite: 668,\n  gypsum: 667,\n  evaporite: 667,\n  claystone: 620,\n  anhydrite: 667,\n  gabbro: 720,\n  basalt: 717,\n  diabase: 717,\n  rhyolite: 722,\n  andesite: 723,\n  till: 681,\n  loess: 684,\n  \"calcareous ooze\": 653,\n  \"siliceous ooze\": 653,\n  chalk: 626,\n  gravel: 601,\n  plutonic: 721,\n  granite: 719,\n  clay: 660,\n  syenite: 722,\n  tuff: 711,\n  volcanic: 725,\n  metamorphic: 707,\n  volcaniclastic: 714,\n  migmatite: 709,\n  gneiss: 708,\n  tonalite: 727,\n  granodiorite: 725,\n  monzonite: 723,\n  argillite: 624,\n  diamictite: 681,\n};\n\nexport function getBestFGDCPatternForLithologyList<\n  T extends UnitLithology | Lithology,\n>(liths: T[]): { lith: T; patternID: string } | null {\n  let lithsSorted = [...liths];\n  lithsSorted.sort((a, b) => b.prop - a.prop);\n  let firstLith = lithsSorted[0];\n  let sym = symbolIndex[firstLith.name];\n  if (sym != null) {\n    return { lith: firstLith, patternID: `${sym}` };\n  }\n  return null;\n}\n\nconst resolveID = (d: any) => {\n  if (d.lith == null || d.lith.length == 0) {\n    return null;\n  }\n  let liths = [...d.lith];\n  let environs = d.environ.map((d) => d.name).join(\" \");\n  liths.sort((a, b) => b.prop - a.prop);\n\n  //console.log(d, d.unit_name, liths.map(d => d.name), environs)\n\n  let sym = null;\n\n  // overrides for IODP columns\n  if (d.unit_name == \"clay\") {\n    return \"650\";\n  }\n  if (d.unit_name == \"calcareous clay\") {\n    return \"651\";\n  }\n\n  for (const k of liths) {\n    if (k.name == \"sandstone\") {\n      // Special cases for sandstone\n      if (environs.includes(\"dune\")) {\n        return \"609\";\n      }\n      if (environs.includes(\"marine\")) {\n        return \"608\";\n      }\n      if (environs.includes(\"shore\")) {\n        return \"611\";\n      }\n      if (environs.includes(\"loess\")) {\n        return \"686\";\n      }\n    }\n\n    if (k.name == \"conglomerate\") {\n      // Special cases for sandstone\n      if (environs.includes(\"fluvial\")) {\n        return \"603\";\n      }\n    }\n\n    if (k.name.includes(\"tuff\")) {\n      return \"711\";\n    }\n    sym = symbolIndex[k.name];\n    if (sym != null) {\n      return sym;\n    }\n\n    if (k.type == \"volcanic\") {\n      return \"725\";\n    }\n  }\n  return sym;\n};\n\nconst patternScale = {\n  \"609\": 1.5,\n  \"603\": 1.5,\n};\n\nconst scalePattern = (id) => {\n  return patternScale[`${id}`] ?? 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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@macrostrat/column-views",
-  "version": "3.0.3",
+  "version": "3.2.0",
   "description": "Data views for Macrostrat stratigraphic columns",
   "repository": {
     "type": "git",
@@ -49,16 +49,17 @@
     "@macrostrat/api-types": "^1.1.5",
     "@macrostrat/color-utils": "^1.2.1",
     "@macrostrat/column-components": "^2.0.4",
-    "@macrostrat/data-components": "^1.0.1",
+    "@macrostrat/data-components": "^1.1.1",
+    "@macrostrat/data-provider": "^1.0.0",
     "@macrostrat/hyper": "^3.0.6",
-    "@macrostrat/map-interface": "^2.0.1",
-    "@macrostrat/map-styles": "^2.0.1",
-    "@macrostrat/mapbox-react": "^3.0.1",
-    "@macrostrat/mapbox-utils": "^1.7.1",
+    "@macrostrat/map-interface": "^2.0.2",
+    "@macrostrat/map-styles": "^2.1.0",
+    "@macrostrat/mapbox-react": "^3.0.2",
+    "@macrostrat/mapbox-utils": "^1.7.2",
     "@macrostrat/stratigraphy-utils": "^1.2.1",
     "@macrostrat/svg-map-components": "^2.0.1",
     "@macrostrat/timescale": "^3.0.1",
-    "@macrostrat/ui-components": "^5.0.4",
+    "@macrostrat/ui-components": "^5.0.5",
     "@turf/boolean-point-in-polygon": "^7.3.2",
     "@turf/buffer": "^7.3.2",
     "@turf/centroid": "^7.3.2",
@@ -83,14 +84,15 @@
     "d3-shape": "^3.2.0",
     "jotai": "^2.16.0",
     "jotai-scope": "^0.10.0",
-    "mapbox-gl": "^2.15.0||^3.0.0",
+    "mapbox-gl": "^3.0.0",
+    "p-map": "^7.0.4",
     "react-spring": "^9.7.5",
     "topojson-client": "^3.1.0",
     "zustand": "^5.0.3",
     "zustand-computed": "^2.0.2"
   },
   "devDependencies": {
-    "@macrostrat/web-components-bundler": "1.0.0"
+    "@macrostrat/web-components-bundler": "1.0.1"
   },
   "publishConfig": {
     "access": "public"

package/src/correlation-chart/stories/correlation-chart.stories.ts

@@ -4,14 +4,15 @@ import { useCorrelationLine } from "./utils";
 import {
   ColumnCorrelationMap,
   ColumnCorrelationProvider,
-  fetchUnits,
-  MacrostratDataProvider,
   MergeSectionsMode,
   useCorrelationMapStore,
-  useMacrostratBaseURL,
-  useMacrostratFetch,
 } from "../..";
 import { hyperStyled } from "@macrostrat/hyper";
+import {
+  MacrostratDataProvider,
+  fetchUnits,
+  useMacrostratFetch,
+} from "@macrostrat/data-provider";
 
 import styles from "./stories.module.sass";
 import { CorrelationChart, CorrelationChartProps } from "../main";
@@ -19,6 +20,7 @@ import { ErrorBoundary, useAsyncMemo } from "@macrostrat/ui-components";
 import { OverlaysProvider } from "@blueprintjs/core";
 import { EnvironmentColoredUnitComponent } from "../../units";
 import { scaleLinear, scalePow } from "d3-scale";
+import { MacrostratInteractionProvider } from "@macrostrat/data-components";
 
 const mapboxToken = import.meta.env.VITE_MAPBOX_API_TOKEN;
 
@@ -35,29 +37,34 @@ function CorrelationStoryUI({
   projectID,
   ...rest
 }: any) {
+  const domain = "https://dev.macrostrat.org";
   return h(
     MacrostratDataProvider,
-    { baseURL: "https://dev.macrostrat.org/api/v2" },
+    { baseURL: domain + "/api/v2" },
     h(
-      ColumnCorrelationProvider,
-      {
-        focusedLine,
-        columns: null,
-        projectID,
-        onSelectColumns(cols, line) {
-          setFocusedLine(line);
+      MacrostratInteractionProvider,
+      { linkDomain: domain },
+      h(
+        ColumnCorrelationProvider,
+        {
+          focusedLine,
+          columns: null,
+          projectID,
+          onSelectColumns(cols, line) {
+            setFocusedLine(line);
+          },
         },
-      },
-      h("div.correlation-ui", [
-        h("div.correlation-container", h(CorrelationDiagramWrapper, rest)),
-        h("div.right-column", [
-          h(ColumnCorrelationMap, {
-            accessToken: mapboxToken,
-            className: "correlation-map",
-            //showLogo: false,
-          }),
+        h("div.correlation-ui", [
+          h("div.correlation-container", h(CorrelationDiagramWrapper, rest)),
+          h("div.right-column", [
+            h(ColumnCorrelationMap, {
+              accessToken: mapboxToken,
+              className: "correlation-map",
+              //showLogo: false,
+            }),
+          ]),
         ]),
-      ]),
+      ),
     ),
   );
 }

package/src/data-provider/index.ts

@@ -1,5 +1,3 @@
-export * from "./fetch";
-export * from "./base";
 export * from "./column-nav";
 export * from "./store";
 export * from "./unit-selection";

package/src/data-provider/store.ts

@@ -4,7 +4,7 @@ import {
   CompositeColumnScale,
   createCompositeScale,
 } from "../prepare-units/composite-scale";
-import { ColumnAxisType } from "@macrostrat/column-components";
+import { ColumnAxisType, ColumnProvider } from "@macrostrat/column-components";
 import type { ExtUnit, PackageLayoutData } from "../prepare-units";
 import {
   allowUnitSelectionAtom,
@@ -12,14 +12,24 @@ import {
   UnitSelectionCallbacks,
   UnitSelectionCallbackManager,
 } from "./unit-selection";
-import { BaseUnit } from "@macrostrat/api-types";
-import {
-  AtomMap,
-  columnUnitsAtom,
-  columnUnitsMapAtom,
-  scope,
-  ScopedProvider,
-} from "./core";
+import type { BaseUnit } from "@macrostrat/api-types";
+import { type AtomMap, createScopedStore } from "@macrostrat/data-components";
+import { atom } from "jotai";
+import { useEffect } from "react";
+
+export const scope = createScopedStore();
+
+export const columnUnitsAtom = atom<BaseUnit[]>();
+
+export const columnUnitsMapAtom = atom<Map<number, BaseUnit> | null>((get) => {
+  const units = get(columnUnitsAtom);
+  if (!units) return null;
+  const unitMap = new Map<number, BaseUnit>();
+  units.forEach((unit) => {
+    unitMap.set(unit.unit_id, unit);
+  });
+  return unitMap;
+});
 
 export interface ColumnStateProviderProps<
   T extends BaseUnit,
@@ -64,9 +74,11 @@ export function MacrostratColumnStateProvider<T extends BaseUnit>({
   }
 
   return h(
-    ScopedProvider,
+    scope.Provider,
     {
       atoms: atomMap,
+      keepUpdated: true,
+      inherit: true,
     },
     [selectionHandlers, children],
   );
@@ -170,3 +182,33 @@ export function useCompositeScale(): CompositeColumnScale {
     [ctx.sections],
   );
 }
+
+export function MacrostratColumnProvider(props) {
+  /** A column provider specialized the Macrostrat API. Maps more
+   * generic concepts to Macrostrat-specific ones.
+   */
+
+  const { axisType } = useMacrostratColumnData();
+  const { units, domain, pixelScale, scale, children } = props;
+  return h(
+    ColumnProvider,
+    {
+      axisType,
+      divisions: units,
+      range: domain,
+      pixelsPerMeter: pixelScale,
+      scale,
+    },
+    children,
+  );
+}
+
+/** This is now a legacy provider */
+export function LithologiesProvider({ children }) {
+  useEffect(() => {
+    console.warn(
+      "LithologiesProvider is deprecated. Replace with MacrostratDataProvider",
+    );
+  }, []);
+  return children;
+}

package/src/data-provider/unit-selection.ts

@@ -1,15 +1,15 @@
-import { BaseUnit, UnitLong } from "@macrostrat/api-types";
+import type { BaseUnit, UnitLong } from "@macrostrat/api-types";
 import { useKeyHandler } from "@macrostrat/ui-components";
 import { useEffect, useRef, useCallback, useMemo } from "react";
 import type { RectBounds, IUnit } from "../units/types";
 import { atom } from "jotai";
-import { columnUnitsMapAtom, scope } from "./core";
-import { ColumnData } from "@macrostrat/column-views";
+import { scope, columnUnitsMapAtom } from "./store";
 import {
   AgeRangeQuantifiedDifference,
   ageRangeQuantifiedDifference,
   AgeRangeRelationship,
 } from "@macrostrat/stratigraphy-utils";
+import type { ColumnData } from "@macrostrat/data-provider";
 
 type UnitSelectDispatch = (
   unit: number | BaseUnit | null,
@@ -69,7 +69,7 @@ const selectedUnitAtom = atom(
     target: HTMLElement | null = null,
   ): BaseUnit | null => {
     if (!get(allowUnitSelectionAtom)) {
-      throw new Error("Unit selection is disabled.");
+      console.error("Unit selection is disabled.");
     }
 
     let unitID: number | null;

package/src/maps/_shared/styles.ts

@@ -3,11 +3,18 @@ import { buildGeoJSONSource } from "@macrostrat/mapbox-utils";
 import type { Style } from "mapbox-gl";
 
 export function buildColumnsStyle(color: string): Style {
-  let columnColor = color ?? getCSSVariable("--text-subtle-color", "black");
+  let columnColor: any =
+    color ?? getCSSVariable("--text-subtle-color", "black");
   const columnSelectedColor = getCSSVariable("--selection-color", "purple");
 
-  // If color is in the geojson properties, use that
-  columnColor = ["coalesce", ["get", "color"], columnColor];
+  // If color is in the feature state or geojson properties, use that as second choice
+
+  columnColor = [
+    "coalesce",
+    ["feature-state", "color"],
+    ["get", "color"],
+    columnColor,
+  ];
 
   return {
     sources: {

package/src/maps/column-correlation/state.ts

@@ -15,7 +15,7 @@ import {
 } from "react";
 import h from "@macrostrat/hyper";
 import { createComputed } from "zustand-computed";
-import { useMacrostratColumns } from "../../data-provider/base";
+import { useMacrostratColumns } from "@macrostrat/data-provider";
 import { buffer } from "@turf/buffer";
 import { booleanPointInPolygon } from "@turf/boolean-point-in-polygon";
 
@@ -26,6 +26,7 @@ export interface CorrelationMapInput {
 
 export interface CorrelationMapStore extends CorrelationMapInput {
   onClickMap: (event: mapboxgl.MapMouseEvent, point: Point) => void;
+  projectID?: number;
 }
 
 export interface CorrelationProviderProps extends CorrelationMapInput {

package/src/maps/column-navigation/mapbox/state.ts

@@ -12,7 +12,7 @@ import h from "@macrostrat/hyper";
 import {
   useMacrostratColumns,
   useMacrostratStore,
-} from "../../../data-provider";
+} from "@macrostrat/data-provider";
 
 export interface NavigationStore {
   columns: ColumnGeoJSONRecordWithID[];

package/src/maps/column-navigation/svg/column-navigation-svg-map.stories.ts

@@ -2,7 +2,7 @@ import h from "@macrostrat/hyper";
 
 import { Meta } from "@storybook/react-vite";
 import { ColumnNavigationSVGMap, ColumnNavigationSVGMapProps } from ".";
-import { MacrostratDataProvider } from "../../../data-provider";
+import { MacrostratDataProvider } from "@macrostrat/data-provider";
 import { useState } from "react";
 
 interface ColumnIndexMapProps extends ColumnNavigationSVGMapProps {

package/src/maps/column-navigation/svg/data-fetcher.ts

@@ -0,0 +1,34 @@
+import {
+  ColumnStatusCode,
+  fetchAllColumns,
+  useMacrostratFetch,
+} from "@macrostrat/data-provider";
+import { useAsyncMemo } from "@macrostrat/ui-components";
+
+export function useColumnFeatures({
+  status_code,
+  project_id,
+  format = "geojson",
+}: {
+  apiRoute?: string;
+  status_code?: string;
+  project_id?: number;
+  format?: "geojson" | "topojson" | "geojson_bare";
+}) {
+  /** Legacy fetcher for column features */
+  const fetch = useMacrostratFetch();
+
+  let statusCode: ColumnStatusCode[] = ["active"];
+  if (status_code == "in process") {
+    statusCode.push("in process");
+  }
+
+  return useAsyncMemo(async () => {
+    return await fetchAllColumns({
+      projectID: project_id,
+      statusCode: statusCode,
+      format,
+      fetch,
+    });
+  }, [project_id, status_code, format]);
+}

package/src/maps/column-navigation/svg/layers.ts

@@ -9,7 +9,7 @@ import chroma from "chroma-js";
 import { ExtendedFeature } from "d3-geo";
 import { Polygon } from "geojson";
 import { useContext, useMemo } from "react";
-import { useColumnFeatures } from "../../../data-provider";
+import { useColumnFeatures } from "./data-fetcher";
 import {
   buildKeyMapping,
   buildTriangulation,

package/src/maps/index.ts

@@ -1,3 +1,4 @@
 export * from "./column-navigation";
 export * from "./column-correlation";
 export * from "./_shared";
+export * from "./units-overlay";

package/src/maps/unit-map.stories.ts

@@ -0,0 +1,64 @@
+import h from "@macrostrat/hyper";
+import { Meta } from "@storybook/react-vite";
+import { InsetMap } from "./_shared";
+import { MacrostratDataProvider } from "@macrostrat/data-provider";
+import { useMemo } from "react";
+import { buildUnitsStyle, MacrostratUnitsOverlay } from "./units-overlay";
+
+// @ts-ignore
+const mapboxToken = import.meta.env.VITE_MAPBOX_API_TOKEN;
+
+// More on default export: https://storybook.js.org/docs/react/writing-stories/introduction#default-export
+export default {
+  title: "Column views/Maps/Unit map",
+  component: UnitMapComponent,
+  description: "A map of units through time",
+  argTypes: {
+    time: { control: "number", defaultValue: 100 },
+    ageSpan: { control: "number", defaultValue: 0.05 },
+    patterns: { control: "boolean", defaultValue: false },
+  },
+} as Meta<typeof InsetMap>;
+
+function UnitMapComponent(props) {
+  const overlayStyles = useMemo(() => {
+    let styles: any[] = [
+      buildUnitsStyle({ color: "#444", patterns: props.patterns }),
+    ];
+    return styles;
+  }, []);
+
+  return h(
+    MacrostratDataProvider,
+    {
+      baseURL: "https://dev.macrostrat.org/api/v2",
+    },
+    h(
+      "div",
+      h(
+        InsetMap,
+        {
+          style: { width: "800px", height: "600px" },
+          accessToken: mapboxToken,
+          overlayStyles,
+        },
+        h(MacrostratUnitsOverlay, props),
+      ),
+    ),
+  );
+}
+
+export const UnitMap = {
+  args: {
+    time: 100,
+    ageSpan: 0.05,
+  },
+};
+
+export const WithPatterns = {
+  args: {
+    time: 100,
+    ageSpan: 0.05,
+    patterns: true,
+  },
+};